AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0900040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900040 MtrunA17_Chr6g0486021 98.163 490 9 0 1 490 1 490 0.0 976
Msa0900040 MtrunA17_Chr4g0004821 69.612 464 139 1 27 490 15 476 0.0 662
Msa0900040 MtrunA17_Chr7g0250881 45.085 468 245 6 24 488 46 504 9.46e-133 394
Msa0900040 MtrunA17_Chr6g0457781 44.419 439 239 3 51 486 106 542 1.17e-122 369
Msa0900040 MtrunA17_Chr3g0119401 39.958 478 283 4 13 486 55 532 4.94e-119 359
Msa0900040 MtrunA17_Chr1g0155221 30.872 447 278 8 54 483 53 485 9.25e-55 191
Msa0900040 MtrunA17_Chr7g0214451 30.803 461 296 10 44 484 20 477 4.21e-54 189
Msa0900040 MtrunA17_Chr1g0213631 29.930 431 287 8 67 484 2 430 1.96e-51 181
Msa0900040 MtrunA17_Chr1g0213611 30.407 467 294 11 44 484 65 526 5.61e-51 182
Msa0900040 MtrunA17_Chr8g0373181 30.357 448 284 11 54 486 51 485 1.72e-50 179
Msa0900040 MtrunA17_Chr4g0066581 28.195 493 333 9 4 486 5 486 3.77e-50 178
Msa0900040 MtrunA17_Chr7g0273281 28.764 445 288 8 55 486 67 495 1.03e-49 177
Msa0900040 MtrunA17_Chr4g0032021 31.838 468 289 10 46 487 92 555 1.35e-49 178
Msa0900040 MtrunA17_Chr3g0144361 30.346 491 306 10 24 483 3 488 4.12e-47 171
Msa0900040 MtrunA17_Chr2g0282031 29.252 441 297 6 57 484 60 498 1.10e-46 169
Msa0900040 MtrunA17_Chr4g0039651 29.505 444 286 8 63 483 58 497 1.51e-46 169
Msa0900040 MtrunA17_Chr4g0036021 29.435 496 303 13 23 483 1 484 3.16e-46 168
Msa0900040 MtrunA17_Chr2g0286721 30.152 461 288 11 39 483 38 480 8.46e-46 166
Msa0900040 MtrunA17_Chr4g0021771 28.866 485 302 12 27 484 32 500 8.39e-45 164
Msa0900040 MtrunA17_Chr7g0259471 28.233 464 296 11 39 486 31 473 6.13e-43 158
Msa0900040 MtrunA17_Chr6g0485661 28.317 505 317 13 4 478 13 502 6.46e-43 159
Msa0900040 MtrunA17_Chr8g0373191 28.859 447 274 9 54 487 43 458 6.17e-42 155
Msa0900040 MtrunA17_Chr4g0034681 27.143 490 320 10 23 483 7 488 6.62e-42 156
Msa0900040 MtrunA17_Chr6g0486681 28.496 379 254 6 117 482 111 485 2.41e-41 154
Msa0900040 MtrunA17_Chr6g0486671 28.496 379 254 6 117 482 111 485 2.41e-41 154
Msa0900040 MtrunA17_Chr8g0390261 27.919 394 267 7 104 482 94 485 4.18e-41 154
Msa0900040 MtrunA17_Chr8g0390141 30.303 396 255 8 102 482 96 485 7.93e-41 153
Msa0900040 MtrunA17_Chr8g0373531 27.664 488 297 14 39 484 7 480 1.53e-40 152
Msa0900040 MtrunA17_Chr8g0390521 30.149 471 276 13 48 483 16 468 1.68e-40 152
Msa0900040 MtrunA17_Chr5g0432581 28.958 480 299 14 38 483 8 479 2.79e-40 151
Msa0900040 MtrunA17_Chr7g0259221 28.480 467 311 11 28 486 24 475 3.88e-40 150
Msa0900040 MtrunA17_Chr2g0303731 31.686 344 218 7 40 368 14 355 1.31e-39 150
Msa0900040 MtrunA17_Chr5g0394341 27.525 396 269 7 101 482 92 483 1.62e-39 150
Msa0900040 MtrunA17_Chr4g0065311 25.450 444 308 10 56 484 45 480 7.60e-39 147
Msa0900040 MtrunA17_Chr4g0065324 25.446 448 307 10 56 486 53 490 3.86e-37 143
Msa0900040 MtrunA17_Chr8g0376631 30.816 331 212 6 40 355 14 342 2.94e-34 135
Msa0900040 MtrunA17_Chr8g0376611 31.655 278 180 3 94 361 4 281 5.54e-34 134
Msa0900040 MtrunA17_Chr1g0205691 25.167 449 319 8 56 490 46 491 9.15e-34 133
Msa0900040 MtrunA17_Chr3g0115711 25.250 400 282 7 96 482 87 482 2.33e-33 132
Msa0900040 MtrunA17_Chr5g0445601 26.582 395 270 8 102 482 96 484 7.55e-33 130
Msa0900040 MtrunA17_Chr3g0115721 24.938 401 276 8 102 484 92 485 2.35e-32 129
Msa0900040 MtrunA17_Chr1g0205681 23.325 403 293 5 101 490 93 492 3.96e-32 128
Msa0900040 MtrunA17_Chr7g0257631 25.888 394 276 6 102 483 130 519 6.73e-32 128
Msa0900040 MtrunA17_Chr2g0303701 30.499 341 223 5 40 368 14 352 2.71e-31 127
Msa0900040 MtrunA17_Chr3g0078971 24.235 392 285 6 103 483 94 484 4.12e-31 125
Msa0900040 MtrunA17_Chr2g0290181 27.988 343 231 5 40 368 19 359 4.24e-31 126
Msa0900040 MtrunA17_Chr1g0205671 23.267 404 292 6 101 490 92 491 5.98e-31 125
Msa0900040 MtrunA17_Chr3g0115751 24.935 385 272 7 112 482 107 488 5.38e-30 122
Msa0900040 MtrunA17_Chr5g0403831 24.893 466 306 9 54 483 35 492 1.37e-29 121
Msa0900040 MtrunA17_Chr3g0115741 23.421 380 274 6 117 482 110 486 1.43e-29 121
Msa0900040 MtrunA17_Chr1g0164871 24.628 471 309 9 52 483 21 484 4.35e-29 120
Msa0900040 MtrunA17_Chr1g0164851 24.841 471 308 9 52 483 21 484 4.37e-29 120
Msa0900040 MtrunA17_Chr5g0417611 23.913 414 297 6 84 483 78 487 1.82e-28 118
Msa0900040 MtrunA17_Chr4g0048411 24.474 380 273 5 117 483 108 486 6.52e-28 116
Msa0900040 MtrunA17_Chr3g0128081 25.301 415 290 7 84 483 77 486 1.40e-27 115
Msa0900040 MtrunA17_Chr3g0115781 22.775 382 278 6 117 484 109 487 2.59e-27 114
Msa0900040 MtrunA17_Chr3g0078991 24.422 389 281 7 107 483 98 485 3.66e-27 114
Msa0900040 MtrunA17_Chr8g0376601 28.614 332 222 5 52 368 24 355 5.21e-27 114
Msa0900040 MtrunA17_Chr4g0048051 26.225 347 241 4 112 444 103 448 7.06e-27 113
Msa0900040 MtrunA17_Chr5g0420841 23.559 399 285 7 102 484 92 486 1.11e-26 113
Msa0900040 MtrunA17_Chr3g0078791 24.796 367 236 7 132 482 68 410 1.26e-26 112
Msa0900040 MtrunA17_Chr3g0128171 24.396 455 314 9 44 484 2 440 2.35e-26 111
Msa0900040 MtrunA17_Chr3g0121674 26.335 281 197 5 214 484 4 284 3.34e-26 108
Msa0900040 MtrunA17_Chr3g0085971 23.333 450 316 11 56 484 45 486 1.54e-25 109
Msa0900040 MtrunA17_Chr2g0290161 28.625 269 157 5 110 367 21 265 9.82e-25 107
Msa0900040 MtrunA17_Chr5g0437021 23.060 464 315 9 55 483 28 484 2.47e-24 105
Msa0900040 MtrunA17_Chr7g0273261 29.524 210 146 2 282 490 33 241 4.05e-23 98.6
Msa0900040 MtrunA17_Chr5g0404191 32.189 233 145 7 54 282 54 277 4.55e-23 99.4
Msa0900040 MtrunA17_Chr3g0115731 24.372 398 238 12 110 484 107 464 8.84e-23 101
Msa0900040 MtrunA17_Chr4g0065351 25.460 326 225 7 170 482 1 321 2.42e-22 98.2
Msa0900040 MtrunA17_Chr5g0434231 31.098 164 89 1 94 257 7 146 3.48e-20 87.4
Msa0900040 MtrunA17_Chr7g0273271 30.374 214 141 3 23 236 1 206 1.95e-18 84.0
Msa0900040 MtrunA17_Chr3g0146061 28.319 226 133 2 278 482 506 723 3.96e-18 87.8
Msa0900040 MtrunA17_Chr3g0146061 30.570 193 129 4 91 279 45 236 3.54e-15 78.6
Msa0900040 MtrunA17_Chr3g0144261 29.524 210 133 3 286 482 506 713 1.30e-17 85.9
Msa0900040 MtrunA17_Chr3g0144261 29.108 213 147 3 55 265 9 219 3.02e-16 81.6
Msa0900040 MtrunA17_Chr5g0419321 29.612 206 141 3 78 279 60 265 3.14e-17 84.7
Msa0900040 MtrunA17_Chr5g0419321 25.103 243 158 4 255 482 498 731 7.35e-13 71.2
Msa0900040 MtrunA17_Chr5g0407441 26.613 248 173 4 55 293 9 256 1.23e-16 82.8
Msa0900040 MtrunA17_Chr5g0407441 26.364 220 145 3 278 482 488 705 6.51e-15 77.4
Msa0900040 MtrunA17_Chr8g0370151 26.606 218 139 4 282 482 131 344 5.43e-16 79.3
Msa0900040 MtrunA17_Chr8g0370141 24.444 225 167 2 57 278 11 235 1.68e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900040 AT1G67300.1 73.428 493 126 3 1 489 1 492 0.0 704
Msa0900040 AT1G67300.3 73.428 493 126 3 1 489 1 492 0.0 704
Msa0900040 AT1G67300.2 73.279 494 126 4 1 489 1 493 0.0 699
Msa0900040 AT1G79820.2 66.530 487 157 2 1 487 11 491 0.0 643
Msa0900040 AT1G79820.1 66.530 487 157 2 1 487 11 491 0.0 643
Msa0900040 AT1G67300.6 71.954 435 117 3 1 431 1 434 0.0 626
Msa0900040 AT1G67300.7 71.954 435 117 3 1 431 1 434 0.0 626
Msa0900040 AT1G67300.4 71.628 430 117 3 1 426 1 429 0.0 614
Msa0900040 AT1G67300.5 71.628 430 117 3 1 426 1 429 0.0 614
Msa0900040 AT1G79820.4 65.429 431 143 2 1 431 11 435 0.0 560
Msa0900040 AT1G79820.3 58.111 487 150 3 1 487 11 443 0.0 539
Msa0900040 AT1G79820.5 56.374 353 106 1 135 487 77 381 1.17e-129 382
Msa0900040 AT1G05030.1 42.952 454 257 2 39 490 68 521 6.07e-124 372
Msa0900040 AT5G16150.2 42.947 475 263 2 13 486 75 542 6.42e-121 365
Msa0900040 AT5G16150.1 42.947 475 263 2 13 486 75 542 6.42e-121 365
Msa0900040 AT5G16150.3 42.947 475 263 2 13 486 75 542 6.42e-121 365
Msa0900040 AT1G05030.2 42.790 423 240 2 70 490 47 469 9.07e-112 339
Msa0900040 AT1G54730.2 30.380 474 300 12 28 486 7 465 4.04e-53 186
Msa0900040 AT1G19450.1 31.929 451 273 11 51 483 50 484 9.21e-53 186
Msa0900040 AT1G75220.1 31.461 445 283 11 51 483 49 483 1.35e-52 185
Msa0900040 AT2G43330.1 30.303 462 310 6 34 483 15 476 3.77e-51 182
Msa0900040 AT5G18840.1 30.169 474 305 9 22 483 16 475 5.73e-49 175
Msa0900040 AT1G54730.5 29.299 471 288 13 28 486 7 444 1.11e-48 174
Msa0900040 AT1G08930.1 30.474 443 283 9 55 486 63 491 1.80e-48 174
Msa0900040 AT1G08930.2 30.474 443 283 9 55 486 63 491 1.80e-48 174
Msa0900040 AT5G17010.1 28.081 495 320 11 12 483 18 499 5.38e-48 173
Msa0900040 AT5G17010.3 28.081 495 320 11 12 483 18 499 5.38e-48 173
Msa0900040 AT5G17010.4 28.081 495 320 11 12 483 18 499 5.38e-48 173
Msa0900040 AT2G20780.1 30.849 483 300 13 22 484 30 498 7.39e-48 173
Msa0900040 AT2G48020.2 29.299 471 299 10 33 488 12 463 3.52e-46 167
Msa0900040 AT2G48020.1 29.299 471 299 10 33 488 12 463 3.52e-46 167
Msa0900040 AT4G04750.3 27.655 499 331 10 3 485 30 514 7.06e-46 167
Msa0900040 AT5G59250.1 29.158 487 317 6 26 487 74 557 8.19e-46 168
Msa0900040 AT3G05165.3 27.615 478 318 11 18 486 5 463 1.88e-44 162
Msa0900040 AT3G05165.2 27.615 478 318 11 18 486 5 463 1.88e-44 162
Msa0900040 AT3G05165.1 27.615 478 318 11 18 486 5 463 1.88e-44 162
Msa0900040 AT3G03090.1 28.025 471 307 11 40 483 34 499 2.91e-44 163
Msa0900040 AT3G05160.3 29.545 396 261 8 99 486 20 405 4.54e-44 160
Msa0900040 AT3G05160.2 29.545 396 261 8 99 486 20 405 4.54e-44 160
Msa0900040 AT4G04750.1 28.092 477 317 9 21 485 8 470 4.59e-44 162
Msa0900040 AT4G04750.2 28.092 477 317 9 21 485 8 470 4.59e-44 162
Msa0900040 AT3G20460.1 28.337 487 319 11 13 486 17 486 8.35e-44 161
Msa0900040 AT3G05160.1 29.293 396 262 7 99 486 69 454 8.95e-44 160
Msa0900040 AT2G20780.2 32.346 405 241 10 102 484 47 440 1.29e-43 160
Msa0900040 AT1G54730.3 29.263 434 277 12 23 440 1 420 4.19e-43 158
Msa0900040 AT3G05150.1 26.653 484 323 10 18 487 5 470 5.18e-43 159
Msa0900040 AT3G05150.3 26.653 484 323 10 18 487 5 470 5.18e-43 159
Msa0900040 AT3G05150.2 26.875 480 319 10 18 483 5 466 6.73e-43 159
Msa0900040 AT4G36670.1 29.787 470 288 11 48 483 15 476 3.97e-42 157
Msa0900040 AT2G16130.1 30.149 471 286 12 48 483 24 486 9.21e-42 156
Msa0900040 AT4G04760.1 29.157 439 291 6 55 483 36 464 2.11e-41 154
Msa0900040 AT3G18830.1 27.609 460 297 9 55 483 41 495 2.17e-41 155
Msa0900040 AT4G04760.2 28.736 435 295 6 55 483 36 461 3.35e-41 154
Msa0900040 AT5G27360.1 29.325 474 315 9 24 489 10 471 3.89e-41 154
Msa0900040 AT4G04760.3 29.397 398 263 5 96 483 16 405 9.96e-41 151
Msa0900040 AT5G27360.3 29.325 474 315 9 24 489 58 519 1.51e-40 153
Msa0900040 AT3G05155.1 27.079 469 315 8 24 483 5 455 1.19e-39 149
Msa0900040 AT2G16120.1 30.388 464 280 12 55 483 31 486 5.16e-39 148
Msa0900040 AT1G54730.4 28.074 431 265 13 23 440 1 399 1.10e-38 145
Msa0900040 AT3G05400.1 27.215 474 318 11 24 487 4 460 2.76e-38 145
Msa0900040 AT1G54730.9 28.504 421 270 12 28 433 7 411 5.29e-38 144
Msa0900040 AT1G54730.7 28.504 421 270 12 28 433 7 411 5.29e-38 144
Msa0900040 AT3G05165.6 26.829 451 302 11 18 459 5 436 5.66e-38 145
Msa0900040 AT1G08900.5 26.884 398 268 6 101 487 32 417 1.67e-37 142
Msa0900040 AT1G08900.1 26.050 476 324 9 23 487 1 459 2.35e-37 143
Msa0900040 AT1G08900.2 26.050 476 324 9 23 487 1 459 2.35e-37 143
Msa0900040 AT1G08900.3 26.884 398 268 6 101 487 66 451 3.19e-37 142
Msa0900040 AT2G18480.1 29.348 460 270 12 64 483 36 480 4.68e-37 143
Msa0900040 AT5G26340.1 27.182 401 273 8 96 482 89 484 4.77e-37 143
Msa0900040 AT2G35740.1 30.909 330 214 5 55 370 31 360 6.54e-37 144
Msa0900040 AT3G05165.4 26.988 415 280 10 28 430 5 408 1.11e-36 141
Msa0900040 AT3G05165.5 26.988 415 280 10 28 430 5 408 1.11e-36 141
Msa0900040 AT4G02050.2 26.350 463 300 12 55 484 32 486 1.14e-36 142
Msa0900040 AT4G02050.1 26.350 463 300 12 55 484 32 486 1.14e-36 142
Msa0900040 AT5G27350.1 28.067 481 316 9 23 489 3 467 3.19e-36 140
Msa0900040 AT1G30220.1 32.000 350 205 6 40 366 16 355 3.24e-36 141
Msa0900040 AT1G08920.1 26.757 441 302 7 55 486 37 465 1.20e-35 138
Msa0900040 AT1G77210.2 25.821 457 308 9 55 482 31 485 6.14e-35 137
Msa0900040 AT1G77210.1 25.821 457 308 9 55 482 31 485 6.14e-35 137
Msa0900040 AT3G05400.2 26.582 474 301 12 24 487 4 440 6.74e-35 135
Msa0900040 AT2G48020.4 29.738 343 225 6 33 370 12 343 4.35e-34 132
Msa0900040 AT1G08920.2 26.174 447 302 7 56 486 38 472 5.06e-34 134
Msa0900040 AT1G08890.1 26.364 440 303 7 56 486 33 460 5.94e-34 134
Msa0900040 AT5G27360.2 29.457 387 244 9 111 489 2 367 6.15e-34 132
Msa0900040 AT5G27360.5 29.457 387 244 9 111 489 2 367 6.15e-34 132
Msa0900040 AT3G19940.1 24.026 462 311 10 55 482 30 485 6.23e-34 134
Msa0900040 AT1G54730.8 27.273 418 258 13 28 433 7 390 8.88e-34 132
Msa0900040 AT4G16480.2 30.595 353 225 6 39 371 10 362 1.23e-33 134
Msa0900040 AT4G16480.3 30.595 353 225 6 39 371 10 362 1.23e-33 134
Msa0900040 AT4G16480.1 30.595 353 225 6 39 371 10 362 1.23e-33 134
Msa0900040 AT1G54730.11 30.205 341 212 10 28 356 7 333 2.93e-33 129
Msa0900040 AT1G50310.1 23.861 461 314 9 55 482 30 486 6.02e-33 131
Msa0900040 AT2G48020.3 29.878 328 214 6 33 355 12 328 8.27e-33 128
Msa0900040 AT1G08900.4 26.098 387 262 6 61 436 36 409 1.18e-31 126
Msa0900040 AT4G21480.1 25.888 394 278 4 102 483 93 484 2.53e-31 127
Msa0900040 AT5G26250.1 25.700 393 278 6 102 483 91 480 3.73e-31 126
Msa0900040 AT5G61520.2 26.239 343 244 3 103 436 52 394 1.70e-30 124
Msa0900040 AT5G23270.1 24.810 395 280 5 102 482 95 486 2.32e-30 124
Msa0900040 AT5G27360.4 28.718 390 259 8 24 405 10 388 3.59e-30 122
Msa0900040 AT5G61520.1 26.239 343 244 3 103 436 100 442 4.31e-30 123
Msa0900040 AT1G08920.3 26.566 399 273 6 56 445 38 425 1.45e-29 120
Msa0900040 AT3G05960.1 24.808 391 284 4 102 483 90 479 1.72e-29 121
Msa0900040 AT1G11260.1 24.719 445 311 8 56 482 47 485 1.94e-29 121
Msa0900040 AT1G54730.10 29.503 322 201 10 28 337 7 314 3.08e-29 117
Msa0900040 AT1G54730.6 29.503 322 201 10 28 337 7 314 3.08e-29 117
Msa0900040 AT3G19930.1 24.242 396 283 6 102 483 92 484 7.44e-29 119
Msa0900040 AT3G19930.2 24.242 396 283 6 102 483 92 484 7.44e-29 119
Msa0900040 AT5G17010.2 25.050 503 281 13 4 483 7 436 9.57e-29 118
Msa0900040 AT1G07340.1 25.344 363 252 8 96 444 87 444 1.68e-28 118
Msa0900040 AT3G05155.2 28.475 295 203 3 61 355 38 324 2.30e-28 115
Msa0900040 AT1G34580.2 25.635 394 267 7 103 476 44 431 8.71e-27 113
Msa0900040 AT1G34580.1 24.943 441 304 8 56 476 48 481 1.31e-26 113
Msa0900040 AT1G77210.3 28.012 332 220 8 165 482 10 336 3.99e-26 109
Msa0900040 AT1G50310.2 24.398 332 234 6 165 482 15 343 5.86e-26 109
Msa0900040 AT1G20840.2 29.493 217 140 2 279 482 499 715 2.23e-19 92.0
Msa0900040 AT1G20840.2 29.577 213 146 3 55 265 9 219 1.81e-14 76.6
Msa0900040 AT1G20840.1 29.493 217 140 2 279 482 499 715 2.23e-19 92.0
Msa0900040 AT1G20840.1 29.577 213 146 3 55 265 9 219 1.81e-14 76.6
Msa0900040 AT3G51490.2 26.339 224 152 1 272 482 493 716 5.72e-18 87.4
Msa0900040 AT3G51490.2 29.258 229 157 4 55 279 9 236 1.89e-17 85.9
Msa0900040 AT3G51490.3 26.339 224 152 1 272 482 443 666 6.45e-18 87.4
Msa0900040 AT3G51490.3 30.601 183 122 4 101 279 5 186 2.64e-14 75.9
Msa0900040 AT3G51490.1 29.258 229 157 4 55 279 9 236 1.72e-17 86.3
Msa0900040 AT3G51490.1 26.852 216 153 2 272 482 493 708 1.14e-15 80.5
Msa0900040 AT4G35300.5 28.365 208 136 1 288 482 318 525 3.06e-17 84.7
Msa0900040 AT4G35300.9 28.319 226 144 3 274 482 488 712 3.67e-17 85.1
Msa0900040 AT4G35300.9 31.414 191 127 3 78 265 32 221 1.80e-14 76.6
Msa0900040 AT4G35300.2 28.319 226 144 3 274 482 488 712 3.67e-17 85.1
Msa0900040 AT4G35300.2 31.414 191 127 3 78 265 32 221 1.80e-14 76.6
Msa0900040 AT4G35300.3 28.319 226 144 3 274 482 488 712 3.67e-17 85.1
Msa0900040 AT4G35300.3 31.414 191 127 3 78 265 32 221 1.80e-14 76.6
Msa0900040 AT4G35300.4 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.4 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.8 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.8 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.6 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.6 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.11 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.11 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.1 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.1 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.10 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.10 31.414 191 127 3 78 265 32 221 2.02e-14 76.6
Msa0900040 AT4G35300.7 28.365 208 136 1 288 482 515 722 4.35e-17 84.7
Msa0900040 AT4G35300.7 31.414 191 127 3 78 265 32 221 2.02e-14 76.6

Find 162 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGGTGGCGGGTTTGTTTC+TGG 0.044861 6_1:+95441795 Msa0900040:intron
TCCACGTCTTCTTCCATATT+TGG 0.139297 6_1:-95439587 None:intergenic
ACTATTACTTCATTCCTATT+TGG 0.174162 6_1:+95440107 Msa0900040:CDS
GTGATCAAAACCACATTATT+TGG 0.186383 6_1:+95445032 Msa0900040:three_prime_UTR
CAAGCTGTCAGGTGAAATTT+TGG 0.214100 6_1:+95439503 Msa0900040:five_prime_UTR
GAAGGAAGGTTCTACTCTTT+TGG 0.217155 6_1:+95443140 Msa0900040:CDS
TTACGTGTTGACAAATATTA+TGG 0.225884 6_1:-95444860 None:intergenic
AGTTTCTCCTTGTACTATTA+AGG 0.228415 6_1:-95444678 None:intergenic
AGCTGAGTTTGAAAGACTTC+TGG 0.233741 6_1:+95442622 Msa0900040:CDS
TGCAACATGCATTGGTATAT+TGG 0.238211 6_1:+95441652 Msa0900040:CDS
TATATGTCTGATAGATCTTT+TGG 0.250490 6_1:+95440016 Msa0900040:intron
TGTTGGAACTGGCCTGGGCT+TGG 0.255170 6_1:+95441469 Msa0900040:CDS
GTTGGAACTGGCCTGGGCTT+GGG 0.265006 6_1:+95441470 Msa0900040:CDS
TCTCGGAGCTGGCCCAGTTC+CGG 0.265304 6_1:+95444006 Msa0900040:CDS
ATCCCTGTCAAAGAAATTTC+TGG 0.270552 6_1:+95441692 Msa0900040:CDS
ATAGCTGTTGTAAAGCAAAT+AGG 0.283808 6_1:-95442900 None:intergenic
ATATTGGGATCATTATTTAT+TGG 0.300785 6_1:+95441668 Msa0900040:CDS
GTTCGCCACATTCTGCTTCA+TGG 0.303957 6_1:+95444470 Msa0900040:CDS
CAGGTGGCGGGTTTGTTTCT+GGG 0.318635 6_1:+95441796 Msa0900040:intron
TTCAAAAGATAATCCAAATA+TGG 0.322677 6_1:+95439574 Msa0900040:CDS
ACTATTAAGGTACACCAAAA+TGG 0.330292 6_1:-95444665 None:intergenic
CATTCTGTATGTCCGTTCAT+TGG 0.338842 6_1:+95444080 Msa0900040:CDS
GCAACATGCATTGGTATATT+GGG 0.339612 6_1:+95441653 Msa0900040:CDS
GAGAGCATTTCTGTGGATCT+TGG 0.342633 6_1:+95440272 Msa0900040:CDS
TTTGCTTTACAACAGCTATC+TGG 0.354135 6_1:+95442904 Msa0900040:CDS
TGTCTTGGTGGTGCATTGTT+TGG 0.355177 6_1:+95440438 Msa0900040:CDS
GGCTTTGGCTCTGATTCGAC+TGG 0.361021 6_1:-95444053 None:intergenic
TATCATTTCGACGGGTTTGA+TGG 0.367160 6_1:+95443108 Msa0900040:CDS
TTGGATGTTTACTGAGTGGC+TGG 0.368734 6_1:+95440457 Msa0900040:CDS
TGTGCTTTGCCAATGATAAT+TGG 0.370498 6_1:+95440519 Msa0900040:CDS
TTTACATTTGCTCTCGGAGC+TGG 0.372542 6_1:+95443995 Msa0900040:CDS
GGCTGGGTTGCTGATGCGGT+GGG 0.375809 6_1:+95440474 Msa0900040:CDS
AAGTTCTCTGAATTGCTTCA+TGG 0.376418 6_1:+95442716 Msa0900040:CDS
CAGGTCATTAACTTCTTTGT+TGG 0.379541 6_1:+95444393 Msa0900040:intron
GCGCGAGGAGGTGTTATTGC+TGG 0.382704 6_1:-95437648 None:intergenic
TTTGGACAACTTCATTGATA+AGG 0.383366 6_1:+95440034 Msa0900040:CDS
TTATTTGTTGGAACTGGCCT+GGG 0.386917 6_1:+95441464 Msa0900040:CDS
GGAAGGTTATTTGTTGGAAC+TGG 0.389028 6_1:+95441458 Msa0900040:CDS
CTTGTAGGAAGGTTATTTGT+TGG 0.389128 6_1:+95441452 Msa0900040:CDS
GCAGCAACAAACAACTTGTT+TGG 0.389465 6_1:+95441425 Msa0900040:CDS
ACCCGAGATGGTATCCAAAT+AGG 0.391005 6_1:-95440121 None:intergenic
TCCTATTTGGATACCATCTC+GGG 0.391470 6_1:+95440120 Msa0900040:CDS
TCTGTGGATCTTGGATTCAA+TGG 0.392226 6_1:+95440281 Msa0900040:CDS
CATCCAGAAATTTCTTTGAC+AGG 0.394948 6_1:-95441695 None:intergenic
GTTATTTGTTGGAACTGGCC+TGG 0.396085 6_1:+95441463 Msa0900040:CDS
TACCAATGCATGTTGCAATC+TGG 0.400639 6_1:-95441646 None:intergenic
TTCCTGAAGTGATTTCCCTT+TGG 0.407213 6_1:-95444526 None:intergenic
TTCCTATTTGGATACCATCT+CGG 0.412261 6_1:+95440119 Msa0900040:CDS
AAGTGTAACATAGTACGAAT+AGG 0.413297 6_1:+95444725 Msa0900040:three_prime_UTR
GCTGAGTTTGAAAGACTTCT+GGG 0.413713 6_1:+95442623 Msa0900040:CDS
AACCAAAGGGAAATCACTTC+AGG 0.417194 6_1:+95444524 Msa0900040:CDS
TAGCTGTTGTAAAGCAAATA+GGG 0.427192 6_1:-95442899 None:intergenic
CTTCATGGTCATCATTCTAA+AGG 0.428528 6_1:+95442731 Msa0900040:CDS
GTTAGAAGTAGACCCGGAAC+TGG 0.431528 6_1:-95444019 None:intergenic
AACTTGTTTGGCATGCTTGT+AGG 0.433410 6_1:+95441437 Msa0900040:CDS
ATTCTGTATGTCCGTTCATT+GGG 0.435159 6_1:+95444081 Msa0900040:CDS
CATACAGAATGCCATGGCTT+TGG 0.435436 6_1:-95444068 None:intergenic
AAGCTTCCATGAAGGATTTG+TGG 0.440945 6_1:-95440060 None:intergenic
CAACAGGAGGGCCCAAGCCC+AGG 0.447903 6_1:-95441481 None:intergenic
TCATTGGCAAAGCACACAAC+TGG 0.451285 6_1:-95440512 None:intergenic
GCTGATTTGGGCAAGCTGTC+AGG 0.451645 6_1:+95439492 Msa0900040:five_prime_UTR
TGAGAGAGAAGGTGGTGAAA+CGG 0.457519 6_1:-95437722 None:intergenic
ATTGCAGCACCAATTATCAT+TGG 0.457668 6_1:-95440528 None:intergenic
AGCAAGTATAGCTGCAGGTA+TGG 0.460108 6_1:-95441825 None:intergenic
TCAGTAAGAAGCTCTATTCC+TGG 0.461133 6_1:-95444569 None:intergenic
GTCACATAGAGAGCAGCAAC+AGG 0.467076 6_1:-95441497 None:intergenic
AGCTATACTTGCTCTGGCTA+TGG 0.468717 6_1:+95441835 Msa0900040:CDS
AGGAAACCACAAATCCTTCA+TGG 0.470727 6_1:+95440054 Msa0900040:CDS
GATCGGAGCTCTCTGTTCAT+TGG 0.472858 6_1:+95437781 Msa0900040:five_prime_UTR
GGCTATCATAGTTTCAGCTA+TGG 0.472915 6_1:+95444625 Msa0900040:three_prime_UTR
TGGCTGGGTTGCTGATGCGG+TGG 0.476370 6_1:+95440473 Msa0900040:CDS
ACCTGCAGCTATACTTGCTC+TGG 0.477025 6_1:+95441829 Msa0900040:CDS
TTTGTCTTTACATTTGCTCT+CGG 0.479918 6_1:+95443989 Msa0900040:CDS
CTTAGGATCTATCATTTCGA+CGG 0.481101 6_1:+95443099 Msa0900040:intron
ATCCAGATTGCAACATGCAT+TGG 0.485158 6_1:+95441644 Msa0900040:CDS
GAGTAAGCAACAAAATCTAT+TGG 0.487485 6_1:+95445010 Msa0900040:three_prime_UTR
CATATTCATCACTCATCAAT+CGG 0.493761 6_1:+95437589 Msa0900040:five_prime_UTR
TGTACAGATTTCTCTATCCA+TGG 0.495685 6_1:-95444804 None:intergenic
GTGATGAATATGATGGTTGT+TGG 0.498651 6_1:-95437578 None:intergenic
TGGTGTACCTTAATAGTACA+AGG 0.499915 6_1:+95444671 Msa0900040:three_prime_UTR
ATCTTCTCCTCTATCTACCT+TGG 0.501170 6_1:-95442681 None:intergenic
GATGGATAAACTTGGAAGGA+AGG 0.507938 6_1:+95443126 Msa0900040:CDS
CAGTAAGAAGCTCTATTCCT+GGG 0.510810 6_1:-95444568 None:intergenic
TGAAATCGCACTTCTTCCCC+AGG 0.520706 6_1:+95444551 Msa0900040:CDS
TTCTTTACCACATGTACTTG+TGG 0.525490 6_1:+95440082 Msa0900040:CDS
ATCCAGAAATTTCTTTGACA+GGG 0.525829 6_1:-95441694 None:intergenic
TTAGGATCTATCATTTCGAC+GGG 0.528876 6_1:+95443100 Msa0900040:intron
TGATGCGGTGGGGCGACGCA+GGG 0.532276 6_1:+95440485 Msa0900040:CDS
AACCACATTATTTGGTGGAG+TGG 0.532449 6_1:+95445040 Msa0900040:three_prime_UTR
CAGTTATCCAAGGTAGATAG+AGG 0.532743 6_1:+95442674 Msa0900040:CDS
TAGGTACCACGCACAAAAGC+AGG 0.534632 6_1:-95441611 None:intergenic
TTGCGTTTACTTGAGAAACT+TGG 0.535291 6_1:+95444426 Msa0900040:CDS
GCCAGAGCAAGTATAGCTGC+AGG 0.536207 6_1:-95441830 None:intergenic
ATAGGAGTTGCAAATTTGAC+AGG 0.536907 6_1:+95443003 Msa0900040:CDS
GAGTCCACATTGGTTATACA+AGG 0.537097 6_1:+95441871 Msa0900040:CDS
TAAAAGTGCTGGAGTGCCAT+CGG 0.537170 6_1:+95442963 Msa0900040:CDS
GTTCAGTGATTCCATGTCCA+TGG 0.540570 6_1:+95444787 Msa0900040:three_prime_UTR
TGGATTCAATGGAAATACCT+TGG 0.542424 6_1:+95440292 Msa0900040:CDS
AATGTGAAAAGAGAAGAATC+TGG 0.543265 6_1:-95437614 None:intergenic
GTAGCATGCCACCAACAGAT+AGG 0.545059 6_1:-95443740 None:intergenic
ATCAAAACCACATTATTTGG+TGG 0.548208 6_1:+95445035 Msa0900040:three_prime_UTR
CAGAGTTGTTAATGAACCAC+TGG 0.550145 6_1:+95440250 Msa0900040:intron
GAGTGGCTGGGTTGCTGATG+CGG 0.551687 6_1:+95440470 Msa0900040:CDS
AGAAATGTGGTGGAAACCAA+AGG 0.556058 6_1:+95444510 Msa0900040:CDS
ACGGGTTTGATGGATAAACT+TGG 0.556964 6_1:+95443118 Msa0900040:CDS
GCTCTGTACCTATCTGTTGG+TGG 0.559679 6_1:+95443732 Msa0900040:CDS
GACAAATATTATGGAAAACA+TGG 0.559778 6_1:-95444851 None:intergenic
AAGAGAGCTCTGTGATAGAT+CGG 0.561762 6_1:+95437764 Msa0900040:five_prime_UTR
GTGGTGAGCATATGTCTTGG+TGG 0.563339 6_1:+95440426 Msa0900040:CDS
ATGATGGTTGTTGGTTTGCG+AGG 0.563629 6_1:-95437569 None:intergenic
GAAATGTGGTGGAAACCAAA+GGG 0.564185 6_1:+95444511 Msa0900040:CDS
AAACGGAATGAGAGAGAAGG+TGG 0.567077 6_1:-95437730 None:intergenic
TCAATGATCATTCAAGCCAC+AGG 0.572497 6_1:+95443681 Msa0900040:CDS
AACATTGAGTAAAGCAGTTG+AGG 0.576481 6_1:-95444450 None:intergenic
TGCGATGTCACAGTTATCCA+AGG 0.577454 6_1:+95442664 Msa0900040:CDS
TGGATGTTTACTGAGTGGCT+GGG 0.577590 6_1:+95440458 Msa0900040:CDS
TGTTTGGCATGCTTGTAGGA+AGG 0.587875 6_1:+95441441 Msa0900040:CDS
GAAGACGTGGAAGAAAACTT+AGG 0.588517 6_1:+95439599 Msa0900040:CDS
GGAGCTCTGTACCTATCTGT+TGG 0.590772 6_1:+95443729 Msa0900040:CDS
TTAGAAGTAGACCCGGAACT+GGG 0.592228 6_1:-95444018 None:intergenic
AGAAGGTGGTGAAACGGAAG+CGG 0.596553 6_1:-95437716 None:intergenic
GCTGGGTTGCTGATGCGGTG+GGG 0.599017 6_1:+95440475 Msa0900040:CDS
TAGAAGTGTACTTGCTCCTG+TGG 0.600660 6_1:-95443697 None:intergenic
AAGGAAGCACAAACCCGAGA+TGG 0.600845 6_1:-95440133 None:intergenic
TCCAAATATGGAAGAAGACG+TGG 0.602406 6_1:+95439586 Msa0900040:CDS
AATTTGTTAACTCAGGTGGC+GGG 0.603608 6_1:+95441784 Msa0900040:intron
AATCTGGATTAATGCCCCAT+AGG 0.606332 6_1:-95441630 None:intergenic
GATTTCTCTATCCATGGACA+TGG 0.606486 6_1:-95444798 None:intergenic
TGATGGTTGTTGGTTTGCGA+GGG 0.610023 6_1:-95437568 None:intergenic
GGTAAAGAAAGCTTCCATGA+AGG 0.613051 6_1:-95440068 None:intergenic
ACATAGAGAGCAGCAACAGG+AGG 0.614535 6_1:-95441494 None:intergenic
ATAGTACAAGGAGAAACTCA+AGG 0.615024 6_1:+95444683 Msa0900040:three_prime_UTR
AATGGAAATACCTTGGCAGA+AGG 0.620447 6_1:+95440299 Msa0900040:CDS
CTGTCAAAGAAATTTCTGGA+TGG 0.620625 6_1:+95441696 Msa0900040:CDS
GCTTTGGCTCTGATTCGACT+GGG 0.623963 6_1:-95444052 None:intergenic
CTGGTGGTGAGCATATGTCT+TGG 0.624683 6_1:+95440423 Msa0900040:CDS
AGTACACTTCTACCAACTGC+AGG 0.626495 6_1:+95443708 Msa0900040:CDS
ATTTCTGTTAGAAGTAGACC+CGG 0.627330 6_1:-95444025 None:intergenic
TACTGCCATGAAGCAGAATG+TGG 0.628429 6_1:-95444475 None:intergenic
GGAAGGTGCTAACGTGCGCG+AGG 0.629054 6_1:-95437663 None:intergenic
AGGTGCTAACGTGCGCGAGG+AGG 0.630950 6_1:-95437660 None:intergenic
TCGAATCAGAGCCAAAGCCA+TGG 0.635530 6_1:+95444057 Msa0900040:CDS
ATGAAACGGAATGAGAGAGA+AGG 0.636755 6_1:-95437733 None:intergenic
CAGACGTTTGCAAAATCCGA+TGG 0.637092 6_1:-95442979 None:intergenic
GTTTGATGGATAAACTTGGA+AGG 0.637391 6_1:+95443122 Msa0900040:CDS
CATAGAGAGCAGCAACAGGA+GGG 0.642136 6_1:-95441493 None:intergenic
GAAGGAAATTACCCAATGAA+CGG 0.642877 6_1:-95444092 None:intergenic
TGCTGCTCTCTATGTGACAG+AGG 0.645061 6_1:+95441502 Msa0900040:CDS
ACCACTGGAGAGCATTTCTG+TGG 0.649846 6_1:+95440265 Msa0900040:CDS
AACGGACATACAGAATGCCA+TGG 0.660370 6_1:-95444074 None:intergenic
ATAGTTGCCACAAGTACATG+TGG 0.660744 6_1:-95440089 None:intergenic
TACCACTCCACCAAATAATG+TGG 0.661423 6_1:-95445042 None:intergenic
TTGTTTGGATGTTTACTGAG+TGG 0.669214 6_1:+95440453 Msa0900040:CDS
TTGATGAGTGATGAATATGA+TGG 0.669237 6_1:-95437585 None:intergenic
GATTTCAAATGAAGGTCTGG+TGG 0.672149 6_1:+95440407 Msa0900040:intron
TACAAGGAGAAACTCAAGGT+AGG 0.672301 6_1:+95444687 Msa0900040:three_prime_UTR
TCCACAGAAATGCTCTCCAG+TGG 0.673183 6_1:-95440266 None:intergenic
AGTAAGAAGCTCTATTCCTG+GGG 0.702954 6_1:-95444567 None:intergenic
TCAACCTTGTATAACCAATG+TGG 0.712435 6_1:-95441875 None:intergenic
TCTGTGCAGAGAGTCCACAT+TGG 0.714586 6_1:+95441861 Msa0900040:CDS
TGATAATTGGTGCTGCAATG+AGG 0.714653 6_1:+95440532 Msa0900040:CDS
AAGCGGTTATTGATAAACGA+CGG 0.742628 6_1:-95437699 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTATAATTAGATTTTTT+TGG + chr6_1:95440380-95440399 Msa0900040:intron 10.0%
!!! TCTTATAATTAGATTTTTTT+GGG + chr6_1:95440381-95440400 Msa0900040:intron 10.0%
!!! TTTTAAAAAAGATCAATATA+TGG + chr6_1:95443604-95443623 Msa0900040:intron 10.0%
!!! TATTTTTCTCATATTATTAC+CGG + chr6_1:95437930-95437949 Msa0900040:intron 15.0%
!! TAAAATCAAGAAATATATCT+TGG + chr6_1:95439260-95439279 Msa0900040:intron 15.0%
!!! CTTATAATTAGATTTTTTTG+GGG + chr6_1:95440382-95440401 Msa0900040:intron 15.0%
!! ATAGAAACTATATCTAATAA+TGG + chr6_1:95443438-95443457 Msa0900040:intron 15.0%
!!! TTAATCAGAAAACTTTTTTA+AGG + chr6_1:95443630-95443649 Msa0900040:intron 15.0%
!! TTAAGGATATATTATTTGTA+CGG + chr6_1:95443647-95443666 Msa0900040:intron 15.0%
!!! AATTTTTGTAAAAAGAAATG+TGG + chr6_1:95444497-95444516 Msa0900040:CDS 15.0%
!!! CTCCTTTATGATTTTTTTTT+TGG + chr6_1:95438015-95438034 Msa0900040:intron 20.0%
!! AGCCAAAAAAAAAATCATAA+AGG - chr6_1:95438020-95438039 None:intergenic 20.0%
!!! ATTTTATAGGATATTGTTGT+TGG + chr6_1:95438539-95438558 Msa0900040:intron 20.0%
!!! AAGCTTTTTCTTTTTTTTGA+AGG - chr6_1:95438856-95438875 None:intergenic 20.0%
!! GAAAGAAGATAGATATATTT+AGG + chr6_1:95439291-95439310 Msa0900040:intron 20.0%
!! TAGAGAACAATATAACTAAT+AGG - chr6_1:95439442-95439461 None:intergenic 20.0%
!!! TGTACATAATAGAATTTTCA+CGG - chr6_1:95439544-95439563 None:intergenic 20.0%
!!! ATATTTGGATTATCTTTTGA+AGG - chr6_1:95439575-95439594 None:intergenic 20.0%
!! TTCAAAAGATAATCCAAATA+TGG + chr6_1:95439574-95439593 Msa0900040:CDS 20.0%
!! ATGAATCAAACAATGTATAT+TGG - chr6_1:95440572-95440591 None:intergenic 20.0%
!!! ATAATTAGTATTAGTCTTTG+AGG + chr6_1:95440721-95440740 Msa0900040:intron 20.0%
!!! TTGTTAACTTTCTAGTTTAA+AGG + chr6_1:95440898-95440917 Msa0900040:intron 20.0%
!! AAAAGATGGTATAACATTAT+AGG - chr6_1:95440971-95440990 None:intergenic 20.0%
!! TAGCATGAAAATATCATAAT+GGG - chr6_1:95441068-95441087 None:intergenic 20.0%
!! ATATTGGGATCATTATTTAT+TGG + chr6_1:95441668-95441687 Msa0900040:CDS 20.0%
!! AATATAATGACAATAAGAGA+TGG - chr6_1:95441927-95441946 None:intergenic 20.0%
!! TTGATTCTTATTAATTAGCA+AGG + chr6_1:95442471-95442490 Msa0900040:intron 20.0%
!! TGTAGCATATTATCATATTA+AGG + chr6_1:95443218-95443237 Msa0900040:intron 20.0%
!! GTAGCATATTATCATATTAA+GGG + chr6_1:95443219-95443238 Msa0900040:intron 20.0%
!! AATTATAATTCCTCATGATT+AGG + chr6_1:95443388-95443407 Msa0900040:intron 20.0%
!! ATATATTATTTGTACGGTAT+AGG + chr6_1:95443653-95443672 Msa0900040:intron 20.0%
!! TGAAAGAAGAAAAAAATTAG+TGG - chr6_1:95443963-95443982 None:intergenic 20.0%
!! CCTTCAAATTATTAACAATA+CGG + chr6_1:95444269-95444288 Msa0900040:intron 20.0%
!!! TGCAATAATTTTGCATAATT+TGG + chr6_1:95444603-95444622 Msa0900040:three_prime_UTR 20.0%
!!! GCAATAATTTTGCATAATTT+GGG + chr6_1:95444604-95444623 Msa0900040:three_prime_UTR 20.0%
! TTGAATATAATCACATGTGT+CGG - chr6_1:95437904-95437923 None:intergenic 25.0%
!!! CAAGAAATGAAGTTTGTTAT+TGG + chr6_1:95438301-95438320 Msa0900040:intron 25.0%
!! GTGAATTTGTGATTCATTTT+TGG + chr6_1:95438385-95438404 Msa0900040:intron 25.0%
!! TGATTTTGTGTAGATTAGTA+GGG + chr6_1:95438408-95438427 Msa0900040:intron 25.0%
!!! TGTGAAGTACTGTATTTTAT+AGG + chr6_1:95438526-95438545 Msa0900040:intron 25.0%
! CATTTGTGTTTAGATATGTT+AGG + chr6_1:95438625-95438644 Msa0900040:intron 25.0%
!!! AGTTTTGATAGATCATAGTT+CGG + chr6_1:95439139-95439158 Msa0900040:intron 25.0%
! ATAGATATATTTAGGAGCTT+AGG + chr6_1:95439299-95439318 Msa0900040:intron 25.0%
!!! TTTTTAATTTGACTTCCTAC+AGG + chr6_1:95439326-95439345 Msa0900040:intron 25.0%
! AACAATATTGTTTATCCTGT+AGG - chr6_1:95439344-95439363 None:intergenic 25.0%
! TTTCATAGTTTCATCTAATC+TGG + chr6_1:95439834-95439853 Msa0900040:intron 25.0%
!! TTTGATTATTTCTTCAACCA+TGG + chr6_1:95439974-95439993 Msa0900040:intron 25.0%
!! TATATGTCTGATAGATCTTT+TGG + chr6_1:95440016-95440035 Msa0900040:intron 25.0%
! ACTATTACTTCATTCCTATT+TGG + chr6_1:95440107-95440126 Msa0900040:CDS 25.0%
!!! TTGGTTTTATGGCTTTAATT+GGG + chr6_1:95440181-95440200 Msa0900040:intron 25.0%
!!! AGTTTTGATCCTTTGATTTT+TGG + chr6_1:95440221-95440240 Msa0900040:intron 25.0%
!!! GTTTTGATCCTTTGATTTTT+GGG + chr6_1:95440222-95440241 Msa0900040:intron 25.0%
! GTAGCATGAAAATATCATAA+TGG - chr6_1:95441069-95441088 None:intergenic 25.0%
! TCGAAACTAACATTATCATT+AGG - chr6_1:95441105-95441124 None:intergenic 25.0%
!! AATGTTAGTTTCGAAATCAT+AGG + chr6_1:95441111-95441130 Msa0900040:intron 25.0%
! ACTTATACTTGAAACAATAG+AGG - chr6_1:95441363-95441382 None:intergenic 25.0%
!! GTTTCAAGTATAAGTTCTTA+TGG + chr6_1:95441368-95441387 Msa0900040:intron 25.0%
! ATTCAGAGCATATTTAAAAG+AGG - chr6_1:95441767-95441786 None:intergenic 25.0%
! CAAGATAATCAAACAAGTAT+AGG - chr6_1:95441964-95441983 None:intergenic 25.0%
!!! TTTAGAGCTTTTTTACTTTC+TGG - chr6_1:95442101-95442120 None:intergenic 25.0%
!! AGAAAGTAAAAAAGCTCTAA+AGG + chr6_1:95442100-95442119 Msa0900040:intron 25.0%
!!! TTTTTGATGGCAACTAAATA+TGG - chr6_1:95442313-95442332 None:intergenic 25.0%
!!! ATACAGTCTTCTTTTAAGAA+GGG - chr6_1:95442381-95442400 None:intergenic 25.0%
! ATATGATAATATGCTACAAC+TGG - chr6_1:95443216-95443235 None:intergenic 25.0%
!!! AGTTATCATTTTTCAAGTCA+TGG + chr6_1:95443280-95443299 Msa0900040:intron 25.0%
! GAAACTATATCTAATAATGG+AGG + chr6_1:95443441-95443460 Msa0900040:intron 25.0%
! TGGAGGAAAATAAATAAATG+AGG + chr6_1:95443458-95443477 Msa0900040:intron 25.0%
! GGAGGAAAATAAATAAATGA+GGG + chr6_1:95443459-95443478 Msa0900040:intron 25.0%
! GAGGAAAATAAATAAATGAG+GGG + chr6_1:95443460-95443479 Msa0900040:intron 25.0%
! TAAAACACTAACACAACAAA+GGG - chr6_1:95443564-95443583 None:intergenic 25.0%
! TTAAAACACTAACACAACAA+AGG - chr6_1:95443565-95443584 None:intergenic 25.0%
! GTTTCAAAAGAGAATTATTG+AGG + chr6_1:95443930-95443949 Msa0900040:intron 25.0%
! AGAAATTATAAGTAAGCAGA+AGG - chr6_1:95444113-95444132 None:intergenic 25.0%
! GACTATAACCAATTTGTAAT+AGG - chr6_1:95444143-95444162 None:intergenic 25.0%
! GAAGGAAAAAAATGAACTAA+CGG - chr6_1:95444254-95444273 None:intergenic 25.0%
! CCGTATTGTTAATAATTTGA+AGG - chr6_1:95444272-95444291 None:intergenic 25.0%
! AGATTGCAATAAACTTTAGA+AGG - chr6_1:95444369-95444388 None:intergenic 25.0%
!! TTTTGTAAAAAGAAATGTGG+TGG + chr6_1:95444500-95444519 Msa0900040:CDS 25.0%
! TGTACAACGAGAAAAATAAT+GGG + chr6_1:95444821-95444840 Msa0900040:three_prime_UTR 25.0%
! GACAAATATTATGGAAAACA+TGG - chr6_1:95444854-95444873 None:intergenic 25.0%
!! TTACGTGTTGACAAATATTA+TGG - chr6_1:95444863-95444882 None:intergenic 25.0%
TTGATGAGTGATGAATATGA+TGG - chr6_1:95437588-95437607 None:intergenic 30.0%
CATATTCATCACTCATCAAT+CGG + chr6_1:95437589-95437608 Msa0900040:five_prime_UTR 30.0%
AATGTGAAAAGAGAAGAATC+TGG - chr6_1:95437617-95437636 None:intergenic 30.0%
!!! TCTCTTTGTTTTCGATGAAA+CGG - chr6_1:95437750-95437769 None:intergenic 30.0%
!! TTGTTTGCTTTGAAAAACAG+AGG + chr6_1:95438193-95438212 Msa0900040:intron 30.0%
!! ATGAAGTTTGTTATTGGAGT+TGG + chr6_1:95438307-95438326 Msa0900040:intron 30.0%
TTAACAGATTTGTAGAGTAG+TGG + chr6_1:95438346-95438365 Msa0900040:intron 30.0%
! GTGATTTTGTGTAGATTAGT+AGG + chr6_1:95438407-95438426 Msa0900040:intron 30.0%
ATCTGAATCTGATTCTGATT+CGG + chr6_1:95438490-95438509 Msa0900040:intron 30.0%
ACTTATTTGAGCTTATTGAC+TGG + chr6_1:95438652-95438671 Msa0900040:intron 30.0%
CTTATTTGTATAAGCTCTCT+AGG + chr6_1:95438747-95438766 Msa0900040:intron 30.0%
CTGCAAAATAACCTGTTTAT+CGG + chr6_1:95438900-95438919 Msa0900040:intron 30.0%
GACGAATAACAATACATACA+AGG + chr6_1:95439021-95439040 Msa0900040:intron 30.0%
GAATAACAATACATACAAGG+AGG + chr6_1:95439024-95439043 Msa0900040:intron 30.0%
GGCTATCTATATAACATACA+AGG - chr6_1:95439183-95439202 None:intergenic 30.0%
TCAGCTTTACTGAAAAGATT+CGG - chr6_1:95439477-95439496 None:intergenic 30.0%
! TCTTTTCAGTAAAGCTGATT+TGG + chr6_1:95439479-95439498 Msa0900040:intron 30.0%
!! CTTTTCAGTAAAGCTGATTT+GGG + chr6_1:95439480-95439499 Msa0900040:intron 30.0%
AAAGGATTATGCTGAAAAAG+TGG - chr6_1:95439763-95439782 None:intergenic 30.0%
CTGAATAATAAAACGTCGAA+AGG - chr6_1:95439781-95439800 None:intergenic 30.0%
AACGTGATTAGTATTTACCA+TGG - chr6_1:95439994-95440013 None:intergenic 30.0%
TTTGGACAACTTCATTGATA+AGG + chr6_1:95440034-95440053 Msa0900040:CDS 30.0%
!!! CTTGGTTTTATGGCTTTAAT+TGG + chr6_1:95440180-95440199 Msa0900040:intron 30.0%
CAAACAATGTATATTGGATC+TGG - chr6_1:95440566-95440585 None:intergenic 30.0%
! TGATTCATTCTCTTTTTGTG+AGG + chr6_1:95440584-95440603 Msa0900040:intron 30.0%
ATAGTAGCATGAAATTGACA+AGG - chr6_1:95440774-95440793 None:intergenic 30.0%
TGTTATATTCTATGCTTCCA+CGG - chr6_1:95440939-95440958 None:intergenic 30.0%
ATCATTAGGATACACTTACA+AGG - chr6_1:95441091-95441110 None:intergenic 30.0%
TTTCGAAATCATAGGTGAAA+AGG + chr6_1:95441119-95441138 Msa0900040:intron 30.0%
TTCGAAATCATAGGTGAAAA+GGG + chr6_1:95441120-95441139 Msa0900040:intron 30.0%
CACCTTAAAATCAAACCTAA+GGG - chr6_1:95441161-95441180 None:intergenic 30.0%
ACTGAAAAGAAATAGATGCA+GGG - chr6_1:95441305-95441324 None:intergenic 30.0%
AACTGAAAAGAAATAGATGC+AGG - chr6_1:95441306-95441325 None:intergenic 30.0%
!! GCATCTATTTCTTTTCAGTT+TGG + chr6_1:95441306-95441325 Msa0900040:intron 30.0%
TGATTGCTATCTTGAATGAT+AGG + chr6_1:95441583-95441602 Msa0900040:intron 30.0%
ATCCAGAAATTTCTTTGACA+GGG - chr6_1:95441697-95441716 None:intergenic 30.0%
CACATATCACTATTTCATCT+TGG + chr6_1:95441898-95441917 Msa0900040:intron 30.0%
AACTAACAGCTTCATTAACA+TGG - chr6_1:95441993-95442012 None:intergenic 30.0%
TATGGTGAGATTAAAAGAAG+TGG - chr6_1:95442295-95442314 None:intergenic 30.0%
!! TTCTTTTAAGAAGGGAAATG+AGG - chr6_1:95442373-95442392 None:intergenic 30.0%
!! CATACAGTCTTCTTTTAAGA+AGG - chr6_1:95442382-95442401 None:intergenic 30.0%
AGTTATCAAGGACTATCAAA+AGG - chr6_1:95442562-95442581 None:intergenic 30.0%
! AAATTTTTGTGTCCATCTCT+AGG + chr6_1:95442759-95442778 Msa0900040:intron 30.0%
! CGTGAATACAAAATGACTTT+TGG - chr6_1:95442847-95442866 None:intergenic 30.0%
!!! CGTTTTGCAGTTGTTTTTAT+TGG + chr6_1:95442871-95442890 Msa0900040:intron 30.0%
TAGCTGTTGTAAAGCAAATA+GGG - chr6_1:95442902-95442921 None:intergenic 30.0%
ATAGCTGTTGTAAAGCAAAT+AGG - chr6_1:95442903-95442922 None:intergenic 30.0%
!!! TCAACTGTTTTTAAAAGTGC+TGG + chr6_1:95442952-95442971 Msa0900040:CDS 30.0%
!!! TTTTTTTTCCTGCTTTCCTT+AGG + chr6_1:95443082-95443101 Msa0900040:intron 30.0%
GTATGCTGTTACTATGAATA+CGG + chr6_1:95443768-95443787 Msa0900040:intron 30.0%
!!! ATTTTTTTCTTCTTTCACGC+AGG + chr6_1:95443966-95443985 Msa0900040:intron 30.0%
TTTGTCTTTACATTTGCTCT+CGG + chr6_1:95443989-95444008 Msa0900040:CDS 30.0%
! CTTCTGATCAAAAGTTTGTT+TGG + chr6_1:95444178-95444197 Msa0900040:intron 30.0%
TCAAACTCATCTAGACTAAA+TGG - chr6_1:95444322-95444341 None:intergenic 30.0%
TTAGTCTAGATGAGTTTGAT+AGG + chr6_1:95444323-95444342 Msa0900040:intron 30.0%
AGTTTATTGCAATCTTGTAC+AGG + chr6_1:95444374-95444393 Msa0900040:intron 30.0%
!! TATACGCTTTTTGTCCATTT+TGG + chr6_1:95444651-95444670 Msa0900040:three_prime_UTR 30.0%
ACTATTAAGGTACACCAAAA+TGG - chr6_1:95444668-95444687 None:intergenic 30.0%
AGTTTCTCCTTGTACTATTA+AGG - chr6_1:95444681-95444700 None:intergenic 30.0%
AAGTGTAACATAGTACGAAT+AGG + chr6_1:95444725-95444744 Msa0900040:three_prime_UTR 30.0%
CTGTACAACGAGAAAAATAA+TGG + chr6_1:95444820-95444839 Msa0900040:three_prime_UTR 30.0%
GTACAACGAGAAAAATAATG+GGG + chr6_1:95444822-95444841 Msa0900040:three_prime_UTR 30.0%
TACAACGAGAAAAATAATGG+GGG + chr6_1:95444823-95444842 Msa0900040:three_prime_UTR 30.0%
! GTATTTTGCTAGCATTGTAA+TGG + chr6_1:95444907-95444926 Msa0900040:three_prime_UTR 30.0%
GAGTAAGCAACAAAATCTAT+TGG + chr6_1:95445010-95445029 Msa0900040:three_prime_UTR 30.0%
GTGATCAAAACCACATTATT+TGG + chr6_1:95445032-95445051 Msa0900040:three_prime_UTR 30.0%
ATCAAAACCACATTATTTGG+TGG + chr6_1:95445035-95445054 Msa0900040:three_prime_UTR 30.0%
GTGATGAATATGATGGTTGT+TGG - chr6_1:95437581-95437600 None:intergenic 35.0%
!!! GTGTTATTGCTGGTTTTTGA+AGG - chr6_1:95437641-95437660 None:intergenic 35.0%
AAGCGGTTATTGATAAACGA+CGG - chr6_1:95437702-95437721 None:intergenic 35.0%
! ACGTCTTTCATCAGAAGTAT+CGG - chr6_1:95437855-95437874 None:intergenic 35.0%
TGTGTAGATTAGTAGGGATA+AGG + chr6_1:95438414-95438433 Msa0900040:intron 35.0%
!!! TTTTCTAGCTAGTTTCACGT+AGG + chr6_1:95438595-95438614 Msa0900040:intron 35.0%
!! AAGCTCTCTAGGATAGTTTA+TGG + chr6_1:95438758-95438777 Msa0900040:intron 35.0%
ATAACCTGTTTATCGGAACA+TGG + chr6_1:95438907-95438926 Msa0900040:intron 35.0%
!! ACATGGTCTTATGTAGGATT+AGG + chr6_1:95438924-95438943 Msa0900040:intron 35.0%
!! CATGGTCTTATGTAGGATTA+GGG + chr6_1:95438925-95438944 Msa0900040:intron 35.0%
!!! TGTTTTTAGTGATTCAGTGC+AGG - chr6_1:95438995-95439014 None:intergenic 35.0%
!!! AGGAGGTATCATGATTTTAG+TGG + chr6_1:95439041-95439060 Msa0900040:intron 35.0%
!!! GGAGGTATCATGATTTTAGT+GGG + chr6_1:95439042-95439061 Msa0900040:intron 35.0%
GTTAGTGTCTCATAAGACAT+TGG + chr6_1:95439361-95439380 Msa0900040:intron 35.0%
AAAAGTGGCAATGATTTCAG+AGG - chr6_1:95439748-95439767 None:intergenic 35.0%
TTCTTTACCACATGTACTTG+TGG + chr6_1:95440082-95440101 Msa0900040:CDS 35.0%
TTCCTATTTGGATACCATCT+CGG + chr6_1:95440119-95440138 Msa0900040:CDS 35.0%
GCATGGAGAAATAGAAACTA+AGG - chr6_1:95440155-95440174 None:intergenic 35.0%
AAAGCCATAAAACCAAGAGA+TGG - chr6_1:95440177-95440196 None:intergenic 35.0%
CTGTAGAACCCAAAAATCAA+AGG - chr6_1:95440233-95440252 None:intergenic 35.0%
TGGATTCAATGGAAATACCT+TGG + chr6_1:95440292-95440311 Msa0900040:CDS 35.0%
!! TTATTTTTCACCTTCTGCCA+AGG - chr6_1:95440312-95440331 None:intergenic 35.0%
! ATCAAACGAAGTACAGGTTT+TGG - chr6_1:95440339-95440358 None:intergenic 35.0%
GATAGTATCAAACGAAGTAC+AGG - chr6_1:95440345-95440364 None:intergenic 35.0%
! TTGGGGTTGATTTCAAATGA+AGG + chr6_1:95440399-95440418 Msa0900040:intron 35.0%
! GTTGATTTCAAATGAAGGTC+TGG + chr6_1:95440404-95440423 Msa0900040:intron 35.0%
TTGTTTGGATGTTTACTGAG+TGG + chr6_1:95440453-95440472 Msa0900040:CDS 35.0%
TGTGCTTTGCCAATGATAAT+TGG + chr6_1:95440519-95440538 Msa0900040:CDS 35.0%
ATTGCAGCACCAATTATCAT+TGG - chr6_1:95440531-95440550 None:intergenic 35.0%
TTATACATTGTGCCTTTGCA+AGG + chr6_1:95440695-95440714 Msa0900040:intron 35.0%
ACTAATTATGCTCCTTGCAA+AGG - chr6_1:95440710-95440729 None:intergenic 35.0%
!! TACTAGTTCTGTTGATCACA+TGG - chr6_1:95440828-95440847 None:intergenic 35.0%
TGTGATCAACAGAACTAGTA+AGG + chr6_1:95440828-95440847 Msa0900040:intron 35.0%
GGGAGAAAGAAGTAAAAAGA+TGG - chr6_1:95440985-95441004 None:intergenic 35.0%
TAAGATGGCAATCGAAAATG+AGG - chr6_1:95441022-95441041 None:intergenic 35.0%
! CATTTTCGATTGCCATCTTA+TGG + chr6_1:95441022-95441041 Msa0900040:intron 35.0%
!! GACCCTTAGGTTTGATTTTA+AGG + chr6_1:95441156-95441175 Msa0900040:intron 35.0%
GCACCTTAAAATCAAACCTA+AGG - chr6_1:95441162-95441181 None:intergenic 35.0%
TGAAAAGAAATAGATGCAGG+GGG - chr6_1:95441303-95441322 None:intergenic 35.0%
CTGAAAAGAAATAGATGCAG+GGG - chr6_1:95441304-95441323 None:intergenic 35.0%
CTTGTAGGAAGGTTATTTGT+TGG + chr6_1:95441452-95441471 Msa0900040:CDS 35.0%
! ATGTGACAGAGGTATGTAAA+TGG + chr6_1:95441513-95441532 Msa0900040:intron 35.0%
! TGGCAAAGATAGAAGTATAG+CGG + chr6_1:95441551-95441570 Msa0900040:intron 35.0%
! TGCAACATGCATTGGTATAT+TGG + chr6_1:95441652-95441671 Msa0900040:CDS 35.0%
! GCAACATGCATTGGTATATT+GGG + chr6_1:95441653-95441672 Msa0900040:CDS 35.0%
ATCCCTGTCAAAGAAATTTC+TGG + chr6_1:95441692-95441711 Msa0900040:CDS 35.0%
CATCCAGAAATTTCTTTGAC+AGG - chr6_1:95441698-95441717 None:intergenic 35.0%
! CTGTCAAAGAAATTTCTGGA+TGG + chr6_1:95441696-95441715 Msa0900040:CDS 35.0%
!! TGCTCTGAATTTGTTAACTC+AGG + chr6_1:95441777-95441796 Msa0900040:intron 35.0%
!! TCTGAATTTGTTAACTCAGG+TGG + chr6_1:95441780-95441799 Msa0900040:intron 35.0%
TCAACCTTGTATAACCAATG+TGG - chr6_1:95441878-95441897 None:intergenic 35.0%
TACAAAAAATCAGCATGTGC+AGG - chr6_1:95442158-95442177 None:intergenic 35.0%
TGATTTCTAACTGTCATCAC+TGG - chr6_1:95442193-95442212 None:intergenic 35.0%
ATTGCAAATCATGCCAAAGA+AGG - chr6_1:95442446-95442465 None:intergenic 35.0%
GTACAAGAGAGAAGTTATCA+AGG - chr6_1:95442574-95442593 None:intergenic 35.0%
! TGACATCGCAAATTTTGCTT+CGG - chr6_1:95442654-95442673 None:intergenic 35.0%
AAGTTCTCTGAATTGCTTCA+TGG + chr6_1:95442716-95442735 Msa0900040:CDS 35.0%
CTTCATGGTCATCATTCTAA+AGG + chr6_1:95442731-95442750 Msa0900040:CDS 35.0%
! TGCTTGTCACTAGTTTCTTT+AGG + chr6_1:95442818-95442837 Msa0900040:intron 35.0%
TTTGCTTTACAACAGCTATC+TGG + chr6_1:95442904-95442923 Msa0900040:CDS 35.0%
ATAGGAGTTGCAAATTTGAC+AGG + chr6_1:95443003-95443022 Msa0900040:CDS 35.0%
GTTGAACAACTCAATACTGT+CGG - chr6_1:95443047-95443066 None:intergenic 35.0%
CTTAGGATCTATCATTTCGA+CGG + chr6_1:95443099-95443118 Msa0900040:intron 35.0%
TTAGGATCTATCATTTCGAC+GGG + chr6_1:95443100-95443119 Msa0900040:intron 35.0%
! GTTTGATGGATAAACTTGGA+AGG + chr6_1:95443122-95443141 Msa0900040:CDS 35.0%
!!! TCTACTCTTTTGGAGTTTCT+TGG + chr6_1:95443150-95443169 Msa0900040:CDS 35.0%
!!! CTACTCTTTTGGAGTTTCTT+GGG + chr6_1:95443151-95443170 Msa0900040:CDS 35.0%
TGCTACAACTGGACTATTAA+AGG - chr6_1:95443205-95443224 None:intergenic 35.0%
ACATCAAAATATGCGTGTCA+GGG + chr6_1:95443254-95443273 Msa0900040:intron 35.0%
!!! TCATTTTTCAAGTCATGGCT+TGG + chr6_1:95443285-95443304 Msa0900040:intron 35.0%
TAAATGAGGGGACTATAGTT+TGG + chr6_1:95443472-95443491 Msa0900040:intron 35.0%
! TGACTTGACATTTTCTTTGC+TGG + chr6_1:95443862-95443881 Msa0900040:intron 35.0%
ATTTCTGTTAGAAGTAGACC+CGG - chr6_1:95444028-95444047 None:intergenic 35.0%
ATTCTGTATGTCCGTTCATT+GGG + chr6_1:95444081-95444100 Msa0900040:CDS 35.0%
GAAGGAAATTACCCAATGAA+CGG - chr6_1:95444095-95444114 None:intergenic 35.0%
AAATGGTGTGCAGCAAATTA+CGG - chr6_1:95444305-95444324 None:intergenic 35.0%
GTTTGATAGGTTCTGTTGTA+TGG + chr6_1:95444336-95444355 Msa0900040:intron 35.0%
CAGGTCATTAACTTCTTTGT+TGG + chr6_1:95444393-95444412 Msa0900040:intron 35.0%
TTGCGTTTACTTGAGAAACT+TGG + chr6_1:95444426-95444445 Msa0900040:CDS 35.0%
AACATTGAGTAAAGCAGTTG+AGG - chr6_1:95444453-95444472 None:intergenic 35.0%
TGGTGTACCTTAATAGTACA+AGG + chr6_1:95444671-95444690 Msa0900040:three_prime_UTR 35.0%
ATAGTACAAGGAGAAACTCA+AGG + chr6_1:95444683-95444702 Msa0900040:three_prime_UTR 35.0%
TACTACTAGCATCTCATGTT+GGG + chr6_1:95444764-95444783 Msa0900040:intron 35.0%
TGTACAGATTTCTCTATCCA+TGG - chr6_1:95444807-95444826 None:intergenic 35.0%
! ACAACGAGAAAAATAATGGG+GGG + chr6_1:95444824-95444843 Msa0900040:three_prime_UTR 35.0%
TGCGAGGGTAAAAAGAAAGA+AGG - chr6_1:95437556-95437575 None:intergenic 40.0%
AAACGACGGAGAAAAACGAA+GGG - chr6_1:95437688-95437707 None:intergenic 40.0%
TAAACGACGGAGAAAAACGA+AGG - chr6_1:95437689-95437708 None:intergenic 40.0%
ATGAAACGGAATGAGAGAGA+AGG - chr6_1:95437736-95437755 None:intergenic 40.0%
AAGAGAGCTCTGTGATAGAT+CGG + chr6_1:95437764-95437783 Msa0900040:five_prime_UTR 40.0%
CTTCTGATGAAAGACGTATC+TGG + chr6_1:95437858-95437877 Msa0900040:intron 40.0%
ACAACATGACACGTAGAAAC+CGG - chr6_1:95437952-95437971 None:intergenic 40.0%
GGAGAATAAACTACCAAGCA+CGG - chr6_1:95437999-95438018 None:intergenic 40.0%
TATCTTCAGTGTGTTCACAC+TGG + chr6_1:95438229-95438248 Msa0900040:intron 40.0%
AAGACCATGTTCCGATAAAC+AGG - chr6_1:95438914-95438933 None:intergenic 40.0%
!! ATCGGAACATGGTCTTATGT+AGG + chr6_1:95438918-95438937 Msa0900040:intron 40.0%
CAACTACGTATCAGAACTAG+AGG - chr6_1:95438970-95438989 None:intergenic 40.0%
TAATAGCTAGCTGCGATTAG+AGG + chr6_1:95439067-95439086 Msa0900040:intron 40.0%
AAACAATCCTCTCCCAATTC+TGG - chr6_1:95439212-95439231 None:intergenic 40.0%
AGAATTGGGAGAGGATTGTT+TGG + chr6_1:95439211-95439230 Msa0900040:intron 40.0%
! CAAGCTGTCAGGTGAAATTT+TGG + chr6_1:95439503-95439522 Msa0900040:five_prime_UTR 40.0%
!! TCAGGTGAAATTTTGGCATG+TGG + chr6_1:95439510-95439529 Msa0900040:exon 40.0%
!! CAGGTGAAATTTTGGCATGT+GGG + chr6_1:95439511-95439530 Msa0900040:exon 40.0%
!! AGGTGAAATTTTGGCATGTG+GGG + chr6_1:95439512-95439531 Msa0900040:exon 40.0%
TCCAAATATGGAAGAAGACG+TGG + chr6_1:95439586-95439605 Msa0900040:CDS 40.0%
TCCACGTCTTCTTCCATATT+TGG - chr6_1:95439590-95439609 None:intergenic 40.0%
GAAGACGTGGAAGAAAACTT+AGG + chr6_1:95439599-95439618 Msa0900040:CDS 40.0%
! AGGTAGGTTATTTCCATGAG+GGG - chr6_1:95439728-95439747 None:intergenic 40.0%
! GAGGTAGGTTATTTCCATGA+GGG - chr6_1:95439729-95439748 None:intergenic 40.0%
! AGAGGTAGGTTATTTCCATG+AGG - chr6_1:95439730-95439749 None:intergenic 40.0%
AGGAAACCACAAATCCTTCA+TGG + chr6_1:95440054-95440073 Msa0900040:CDS 40.0%
AAGCTTCCATGAAGGATTTG+TGG - chr6_1:95440063-95440082 None:intergenic 40.0%
GGTAAAGAAAGCTTCCATGA+AGG - chr6_1:95440071-95440090 None:intergenic 40.0%
ATAGTTGCCACAAGTACATG+TGG - chr6_1:95440092-95440111 None:intergenic 40.0%
TCCTATTTGGATACCATCTC+GGG + chr6_1:95440120-95440139 Msa0900040:CDS 40.0%
TATTTCTCCATGCCATCTCT+TGG + chr6_1:95440162-95440181 Msa0900040:intron 40.0%
CATAAAACCAAGAGATGGCA+TGG - chr6_1:95440172-95440191 None:intergenic 40.0%
!!! CATGCCATCTCTTGGTTTTA+TGG + chr6_1:95440170-95440189 Msa0900040:intron 40.0%
CAGAGTTGTTAATGAACCAC+TGG + chr6_1:95440250-95440269 Msa0900040:intron 40.0%
TCTGTGGATCTTGGATTCAA+TGG + chr6_1:95440281-95440300 Msa0900040:CDS 40.0%
AATGGAAATACCTTGGCAGA+AGG + chr6_1:95440299-95440318 Msa0900040:CDS 40.0%
GATTTCAAATGAAGGTCTGG+TGG + chr6_1:95440407-95440426 Msa0900040:intron 40.0%
!! TGATAATTGGTGCTGCAATG+AGG + chr6_1:95440532-95440551 Msa0900040:CDS 40.0%
TATTCTGTTAGCTGACCCTT+AGG + chr6_1:95441143-95441162 Msa0900040:intron 40.0%
AAAAGAAATAGATGCAGGGG+GGG - chr6_1:95441301-95441320 None:intergenic 40.0%
GAAAAGAAATAGATGCAGGG+GGG - chr6_1:95441302-95441321 None:intergenic 40.0%
! GCAGCAACAAACAACTTGTT+TGG + chr6_1:95441425-95441444 Msa0900040:CDS 40.0%
! AACTTGTTTGGCATGCTTGT+AGG + chr6_1:95441437-95441456 Msa0900040:CDS 40.0%
! GGAAGGTTATTTGTTGGAAC+TGG + chr6_1:95441458-95441477 Msa0900040:CDS 40.0%
! TTATTTGTTGGAACTGGCCT+GGG + chr6_1:95441464-95441483 Msa0900040:CDS 40.0%
AATGGTTGTCTCTGTTTCAC+TGG + chr6_1:95441531-95441550 Msa0900040:intron 40.0%
AATCTGGATTAATGCCCCAT+AGG - chr6_1:95441633-95441652 None:intergenic 40.0%
ATCCAGATTGCAACATGCAT+TGG + chr6_1:95441644-95441663 Msa0900040:CDS 40.0%
TACCAATGCATGTTGCAATC+TGG - chr6_1:95441649-95441668 None:intergenic 40.0%
!! GAATTTGTTAACTCAGGTGG+CGG + chr6_1:95441783-95441802 Msa0900040:intron 40.0%
!! AATTTGTTAACTCAGGTGGC+GGG + chr6_1:95441784-95441803 Msa0900040:intron 40.0%
! GAGTCCACATTGGTTATACA+AGG + chr6_1:95441871-95441890 Msa0900040:CDS 40.0%
AATAGTTGTCCTGCACTCTT+CGG + chr6_1:95442235-95442254 Msa0900040:intron 40.0%
GAGATTAAAAGAAGTGGACG+TGG - chr6_1:95442289-95442308 None:intergenic 40.0%
AGTTGCCATCAAAAACCATG+AGG + chr6_1:95442318-95442337 Msa0900040:intron 40.0%
! CTACTCCTCATGGTTTTTGA+TGG - chr6_1:95442326-95442345 None:intergenic 40.0%
CATCAAAAACCATGAGGAGT+AGG + chr6_1:95442324-95442343 Msa0900040:intron 40.0%
! AGTCTCTTTCTAGCCTTCTT+TGG + chr6_1:95442430-95442449 Msa0900040:intron 40.0%
CAAGGACTATCAAAAGGATG+AGG - chr6_1:95442556-95442575 None:intergenic 40.0%
TTCTCTCTTGTACTACAGCA+AGG + chr6_1:95442581-95442600 Msa0900040:intron 40.0%
AGCTGAGTTTGAAAGACTTC+TGG + chr6_1:95442622-95442641 Msa0900040:CDS 40.0%
GCTGAGTTTGAAAGACTTCT+GGG + chr6_1:95442623-95442642 Msa0900040:CDS 40.0%
CAGTTATCCAAGGTAGATAG+AGG + chr6_1:95442674-95442693 Msa0900040:CDS 40.0%
ATCTTCTCCTCTATCTACCT+TGG - chr6_1:95442684-95442703 None:intergenic 40.0%
CGACACAAATATCCTAGAGA+TGG - chr6_1:95442774-95442793 None:intergenic 40.0%
! GATTTTGCAAACGTCTGCAT+AGG + chr6_1:95442985-95443004 Msa0900040:CDS 40.0%
TGATAGATCCTAAGGAAAGC+AGG - chr6_1:95443093-95443112 None:intergenic 40.0%
CGTCGAAATGATAGATCCTA+AGG - chr6_1:95443101-95443120 None:intergenic 40.0%
! TATCATTTCGACGGGTTTGA+TGG + chr6_1:95443108-95443127 Msa0900040:CDS 40.0%
! ACGGGTTTGATGGATAAACT+TGG + chr6_1:95443118-95443137 Msa0900040:CDS 40.0%
GATGGATAAACTTGGAAGGA+AGG + chr6_1:95443126-95443145 Msa0900040:CDS 40.0%
! GAAGGAAGGTTCTACTCTTT+TGG + chr6_1:95443140-95443159 Msa0900040:CDS 40.0%
CACATCAAAATATGCGTGTC+AGG + chr6_1:95443253-95443272 Msa0900040:intron 40.0%
! CTGTTTTGCTCCTAATCATG+AGG - chr6_1:95443401-95443420 None:intergenic 40.0%
ACACAGCTATGCATAACTGT+GGG + chr6_1:95443514-95443533 Msa0900040:intron 40.0%
AGGGACACTAACACAACAAA+GGG - chr6_1:95443545-95443564 None:intergenic 40.0%
AAGGGACACTAACACAACAA+AGG - chr6_1:95443546-95443565 None:intergenic 40.0%
TCAATGATCATTCAAGCCAC+AGG + chr6_1:95443681-95443700 Msa0900040:CDS 40.0%
CATTCTGTATGTCCGTTCAT+TGG + chr6_1:95444080-95444099 Msa0900040:CDS 40.0%
TGCTGCGTCCTATTACAAAT+TGG + chr6_1:95444132-95444151 Msa0900040:intron 40.0%
AATGGTGTGCAGCAAATTAC+GGG - chr6_1:95444304-95444323 None:intergenic 40.0%
! AGAAATGTGGTGGAAACCAA+AGG + chr6_1:95444510-95444529 Msa0900040:CDS 40.0%
! GAAATGTGGTGGAAACCAAA+GGG + chr6_1:95444511-95444530 Msa0900040:CDS 40.0%
AACCAAAGGGAAATCACTTC+AGG + chr6_1:95444524-95444543 Msa0900040:CDS 40.0%
TTCCTGAAGTGATTTCCCTT+TGG - chr6_1:95444529-95444548 None:intergenic 40.0%
AGTAAGAAGCTCTATTCCTG+GGG - chr6_1:95444570-95444589 None:intergenic 40.0%
CAGTAAGAAGCTCTATTCCT+GGG - chr6_1:95444571-95444590 None:intergenic 40.0%
TCAGTAAGAAGCTCTATTCC+TGG - chr6_1:95444572-95444591 None:intergenic 40.0%
GGCTATCATAGTTTCAGCTA+TGG + chr6_1:95444625-95444644 Msa0900040:three_prime_UTR 40.0%
TACAAGGAGAAACTCAAGGT+AGG + chr6_1:95444687-95444706 Msa0900040:three_prime_UTR 40.0%
CTACTACTAGCATCTCATGT+TGG + chr6_1:95444763-95444782 Msa0900040:intron 40.0%
ACTACTAGCATCTCATGTTG+GGG + chr6_1:95444765-95444784 Msa0900040:intron 40.0%
GATTTCTCTATCCATGGACA+TGG - chr6_1:95444801-95444820 None:intergenic 40.0%
! AACCACATTATTTGGTGGAG+TGG + chr6_1:95445040-95445059 Msa0900040:three_prime_UTR 40.0%
TACCACTCCACCAAATAATG+TGG - chr6_1:95445045-95445064 None:intergenic 40.0%
!! TGATGGTTGTTGGTTTGCGA+GGG - chr6_1:95437571-95437590 None:intergenic 45.0%
!! TGATGGTTGTTGGTTTGCGA+GGG - chr6_1:95437571-95437590 None:intergenic 45.0%
!! ATGATGGTTGTTGGTTTGCG+AGG - chr6_1:95437572-95437591 None:intergenic 45.0%
AACGACGGAGAAAAACGAAG+GGG - chr6_1:95437687-95437706 None:intergenic 45.0%
TGAGAGAGAAGGTGGTGAAA+CGG - chr6_1:95437725-95437744 None:intergenic 45.0%
AAACGGAATGAGAGAGAAGG+TGG - chr6_1:95437733-95437752 None:intergenic 45.0%
TAAACTACCAAGCACGGACA+CGG - chr6_1:95437993-95438012 None:intergenic 45.0%
TTGGGAGAGGATTGTTTGGA+AGG + chr6_1:95439215-95439234 Msa0900040:intron 45.0%
!! GGTGAAATTTTGGCATGTGG+GGG + chr6_1:95439513-95439532 Msa0900040:exon 45.0%
!! ATTTCCATGAGGGGGTATTC+AGG - chr6_1:95439719-95439738 None:intergenic 45.0%
! GGTAGGTTATTTCCATGAGG+GGG - chr6_1:95439727-95439746 None:intergenic 45.0%
GTGGCAATGATTTCAGAGGT+AGG - chr6_1:95439744-95439763 None:intergenic 45.0%
ACCCGAGATGGTATCCAAAT+AGG - chr6_1:95440124-95440143 None:intergenic 45.0%
!! GAGAGCATTTCTGTGGATCT+TGG + chr6_1:95440272-95440291 Msa0900040:CDS 45.0%
!! TGTCTTGGTGGTGCATTGTT+TGG + chr6_1:95440438-95440457 Msa0900040:CDS 45.0%
TTGGATGTTTACTGAGTGGC+TGG + chr6_1:95440457-95440476 Msa0900040:CDS 45.0%
TGGATGTTTACTGAGTGGCT+GGG + chr6_1:95440458-95440477 Msa0900040:CDS 45.0%
TCATTGGCAAAGCACACAAC+TGG - chr6_1:95440515-95440534 None:intergenic 45.0%
TGCCATCTTATGGTTTCCAC+TGG + chr6_1:95441032-95441051 Msa0900040:intron 45.0%
GCCATCTTATGGTTTCCACT+GGG + chr6_1:95441033-95441052 Msa0900040:intron 45.0%
CCATCTTATGGTTTCCACTG+GGG + chr6_1:95441034-95441053 Msa0900040:intron 45.0%
CATCTTATGGTTTCCACTGG+GGG + chr6_1:95441035-95441054 Msa0900040:intron 45.0%
TACACACACTAACTTCCGTG+AGG - chr6_1:95441198-95441217 None:intergenic 45.0%
TGTTTGGCATGCTTGTAGGA+AGG + chr6_1:95441441-95441460 Msa0900040:CDS 45.0%
! GTTATTTGTTGGAACTGGCC+TGG + chr6_1:95441463-95441482 Msa0900040:CDS 45.0%
! CTTTTGTGCGTGGTACCTAT+GGG + chr6_1:95441615-95441634 Msa0900040:CDS 45.0%
! TTTTGTGCGTGGTACCTATG+GGG + chr6_1:95441616-95441635 Msa0900040:CDS 45.0%
AGCAAGTATAGCTGCAGGTA+TGG - chr6_1:95441828-95441847 None:intergenic 45.0%
AGCTATACTTGCTCTGGCTA+TGG + chr6_1:95441835-95441854 Msa0900040:CDS 45.0%
! TAAAGCAAACCGAAGAGTGC+AGG - chr6_1:95442247-95442266 None:intergenic 45.0%
TAAAAGAAGTGGACGTGGCT+GGG - chr6_1:95442284-95442303 None:intergenic 45.0%
TTAAAAGAAGTGGACGTGGC+TGG - chr6_1:95442285-95442304 None:intergenic 45.0%
TGAGGAGTTGAAGAGATGCA+GGG - chr6_1:95442538-95442557 None:intergenic 45.0%
ATGAGGAGTTGAAGAGATGC+AGG - chr6_1:95442539-95442558 None:intergenic 45.0%
TGCGATGTCACAGTTATCCA+AGG + chr6_1:95442664-95442683 Msa0900040:CDS 45.0%
!! TAAAAGTGCTGGAGTGCCAT+CGG + chr6_1:95442963-95442982 Msa0900040:CDS 45.0%
CAGACGTTTGCAAAATCCGA+TGG - chr6_1:95442982-95443001 None:intergenic 45.0%
!!! CTTTTGGAGTTTCTTGGGCA+TGG + chr6_1:95443156-95443175 Msa0900040:CDS 45.0%
CACACAGCTATGCATAACTG+TGG + chr6_1:95443513-95443532 Msa0900040:intron 45.0%
! TAGAAGTGTACTTGCTCCTG+TGG - chr6_1:95443700-95443719 None:intergenic 45.0%
AGTACACTTCTACCAACTGC+AGG + chr6_1:95443708-95443727 Msa0900040:CDS 45.0%
TTTACATTTGCTCTCGGAGC+TGG + chr6_1:95443995-95444014 Msa0900040:CDS 45.0%
TTAGAAGTAGACCCGGAACT+GGG - chr6_1:95444021-95444040 None:intergenic 45.0%
CATACAGAATGCCATGGCTT+TGG - chr6_1:95444071-95444090 None:intergenic 45.0%
AACGGACATACAGAATGCCA+TGG - chr6_1:95444077-95444096 None:intergenic 45.0%
TACTGCCATGAAGCAGAATG+TGG - chr6_1:95444478-95444497 None:intergenic 45.0%
GTTCAGTGATTCCATGTCCA+TGG + chr6_1:95444787-95444806 Msa0900040:three_prime_UTR 45.0%
ACGGAGAAAAACGAAGGGGA+AGG - chr6_1:95437683-95437702 None:intergenic 50.0%
AGAAGGTGGTGAAACGGAAG+CGG - chr6_1:95437719-95437738 None:intergenic 50.0%
GATCGGAGCTCTCTGTTCAT+TGG + chr6_1:95437781-95437800 Msa0900040:five_prime_UTR 50.0%
GTGTGTTCACACTGGAGTAG+TGG + chr6_1:95438237-95438256 Msa0900040:intron 50.0%
ATAGCCCTGCCTCCAGAATT+GGG + chr6_1:95439197-95439216 Msa0900040:intron 50.0%
CAATCCTCTCCCAATTCTGG+AGG - chr6_1:95439209-95439228 None:intergenic 50.0%
!! ATGAGGGGGTATTCAGGTTC+AGG - chr6_1:95439713-95439732 None:intergenic 50.0%
TGAACCTGAATACCCCCTCA+TGG + chr6_1:95439712-95439731 Msa0900040:intron 50.0%
! AAGGAAGCACAAACCCGAGA+TGG - chr6_1:95440136-95440155 None:intergenic 50.0%
!! ACCACTGGAGAGCATTTCTG+TGG + chr6_1:95440265-95440284 Msa0900040:CDS 50.0%
TCCACAGAAATGCTCTCCAG+TGG - chr6_1:95440269-95440288 None:intergenic 50.0%
! CTGGTGGTGAGCATATGTCT+TGG + chr6_1:95440423-95440442 Msa0900040:CDS 50.0%
GTGGTGAGCATATGTCTTGG+TGG + chr6_1:95440426-95440445 Msa0900040:CDS 50.0%
GGTTGATCTCTTAGCTACCG+TGG + chr6_1:95440919-95440938 Msa0900040:intron 50.0%
ATGAGGTGCGTGAGCAATGA+GGG - chr6_1:95441005-95441024 None:intergenic 50.0%
AATGAGGTGCGTGAGCAATG+AGG - chr6_1:95441006-95441025 None:intergenic 50.0%
CCCCAGTGGAAACCATAAGA+TGG - chr6_1:95441037-95441056 None:intergenic 50.0%
! GCACGACTTAGCTTTCCTCA+CGG + chr6_1:95441180-95441199 Msa0900040:intron 50.0%
CATAGAGAGCAGCAACAGGA+GGG - chr6_1:95441496-95441515 None:intergenic 50.0%
ACATAGAGAGCAGCAACAGG+AGG - chr6_1:95441497-95441516 None:intergenic 50.0%
GTCACATAGAGAGCAGCAAC+AGG - chr6_1:95441500-95441519 None:intergenic 50.0%
TGCTGCTCTCTATGTGACAG+AGG + chr6_1:95441502-95441521 Msa0900040:CDS 50.0%
!! GTTTCTCCTGCTTTTGTGCG+TGG + chr6_1:95441605-95441624 Msa0900040:CDS 50.0%
TAGGTACCACGCACAAAAGC+AGG - chr6_1:95441614-95441633 None:intergenic 50.0%
! GCTTTTGTGCGTGGTACCTA+TGG + chr6_1:95441614-95441633 Msa0900040:CDS 50.0%
ACCTGCAGCTATACTTGCTC+TGG + chr6_1:95441829-95441848 Msa0900040:CDS 50.0%
TCTGTGCAGAGAGTCCACAT+TGG + chr6_1:95441861-95441880 Msa0900040:CDS 50.0%
AAAAGAAGTGGACGTGGCTG+GGG - chr6_1:95442283-95442302 None:intergenic 50.0%
GAGTTGAAGCCTACTCCTCA+TGG - chr6_1:95442336-95442355 None:intergenic 50.0%
GCAAGGCAATGTGTAGTCCA+TGG + chr6_1:95442488-95442507 Msa0900040:intron 50.0%
GGAGCTCTGTACCTATCTGT+TGG + chr6_1:95443729-95443748 Msa0900040:CDS 50.0%
GCTCTGTACCTATCTGTTGG+TGG + chr6_1:95443732-95443751 Msa0900040:CDS 50.0%
GTAGCATGCCACCAACAGAT+AGG - chr6_1:95443743-95443762 None:intergenic 50.0%
GTTAGAAGTAGACCCGGAAC+TGG - chr6_1:95444022-95444041 None:intergenic 50.0%
!! GCTTTGGCTCTGATTCGACT+GGG - chr6_1:95444055-95444074 None:intergenic 50.0%
TCGAATCAGAGCCAAAGCCA+TGG + chr6_1:95444057-95444076 Msa0900040:CDS 50.0%
!! GTTTGGTGTCCGACATGTGT+CGG + chr6_1:95444195-95444214 Msa0900040:intron 50.0%
CACATCACATGTGTCAGCGT+TGG - chr6_1:95444224-95444243 None:intergenic 50.0%
GTTCGCCACATTCTGCTTCA+TGG + chr6_1:95444470-95444489 Msa0900040:CDS 50.0%
TGAAATCGCACTTCTTCCCC+AGG + chr6_1:95444551-95444570 Msa0900040:CDS 50.0%
GATAGCCCTGCCTCCAGAAT+TGG + chr6_1:95439196-95439215 Msa0900040:intron 55.0%
! CTCTCCCAATTCTGGAGGCA+GGG - chr6_1:95439204-95439223 None:intergenic 55.0%
!! GCTGATTTGGGCAAGCTGTC+AGG + chr6_1:95439492-95439511 Msa0900040:five_prime_UTR 55.0%
AATGGGAGAAGATCCCCCAG+TGG - chr6_1:95441051-95441070 None:intergenic 55.0%
!! TCAGGTGGCGGGTTTGTTTC+TGG + chr6_1:95441795-95441814 Msa0900040:intron 55.0%
!! CAGGTGGCGGGTTTGTTTCT+GGG + chr6_1:95441796-95441815 Msa0900040:intron 55.0%
GCCAGAGCAAGTATAGCTGC+AGG - chr6_1:95441833-95441852 None:intergenic 55.0%
GCATAGCTGTGTGCTTGCGT+TGG - chr6_1:95443506-95443525 None:intergenic 55.0%
AGGTACAGAGCTCCTGCAGT+TGG - chr6_1:95443723-95443742 None:intergenic 55.0%
!! GGCTTTGGCTCTGATTCGAC+TGG - chr6_1:95444056-95444075 None:intergenic 55.0%
CGTTGGACACCGACACATGT+CGG - chr6_1:95444207-95444226 None:intergenic 55.0%
!! GCGCGAGGAGGTGTTATTGC+TGG - chr6_1:95437651-95437670 None:intergenic 60.0%
ACGGACACGGACACAGATGC+AGG - chr6_1:95437980-95437999 None:intergenic 60.0%
TCTGTGTCCGTGTCCGTGCT+TGG + chr6_1:95437983-95438002 Msa0900040:intron 60.0%
! CCTCTCCCAATTCTGGAGGC+AGG - chr6_1:95439205-95439224 None:intergenic 60.0%
CCTGCCTCCAGAATTGGGAG+AGG + chr6_1:95439202-95439221 Msa0900040:intron 60.0%
GAGTGGCTGGGTTGCTGATG+CGG + chr6_1:95440470-95440489 Msa0900040:CDS 60.0%
GCAGGGGGGGTCAGATGTTT+CGG - chr6_1:95441288-95441307 None:intergenic 60.0%
! TGTTGGAACTGGCCTGGGCT+TGG + chr6_1:95441469-95441488 Msa0900040:CDS 60.0%
! GTTGGAACTGGCCTGGGCTT+GGG + chr6_1:95441470-95441489 Msa0900040:CDS 60.0%
AGGTGCTAACGTGCGCGAGG+AGG - chr6_1:95437663-95437682 None:intergenic 65.0%
!! GGAAGGTGCTAACGTGCGCG+AGG - chr6_1:95437666-95437685 None:intergenic 65.0%
TGGCTGGGTTGCTGATGCGG+TGG + chr6_1:95440473-95440492 Msa0900040:CDS 65.0%
GGCTGGGTTGCTGATGCGGT+GGG + chr6_1:95440474-95440493 Msa0900040:CDS 65.0%
GCTGGGTTGCTGATGCGGTG+GGG + chr6_1:95440475-95440494 Msa0900040:CDS 65.0%
AGTGGACGTGGCTGGGGAGA+GGG - chr6_1:95442277-95442296 None:intergenic 65.0%
AAGTGGACGTGGCTGGGGAG+AGG - chr6_1:95442278-95442297 None:intergenic 65.0%
TCTCGGAGCTGGCCCAGTTC+CGG + chr6_1:95444006-95444025 Msa0900040:CDS 65.0%
TGATGCGGTGGGGCGACGCA+GGG + chr6_1:95440485-95440504 Msa0900040:CDS 70.0%
CAACAGGAGGGCCCAAGCCC+AGG - chr6_1:95441484-95441503 None:intergenic 70.0%
ACGTGGCTGGGGAGAGGGGA+AGG - chr6_1:95442272-95442291 None:intergenic 70.0%
GTGGACGTGGCTGGGGAGAG+GGG - chr6_1:95442276-95442295 None:intergenic 70.0%
CTCGGAGCTGGCCCAGTTCC+GGG + chr6_1:95444007-95444026 Msa0900040:CDS 70.0%
CTGATGCGGTGGGGCGACGC+AGG + chr6_1:95440484-95440503 Msa0900040:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 95437519 95445072 95437519 ID=Msa0900040;Name=Msa0900040
chr6_1 mRNA 95437519 95445072 95437519 ID=Msa0900040-mRNA-1;Parent=Msa0900040;Name=Msa0900040-mRNA-1;_AED=0.13;_eAED=0.13;_QI=323|1|1|1|0.85|0.73|15|472|490
chr6_1 exon 95437519 95437802 95437519 ID=Msa0900040-mRNA-1:exon:16456;Parent=Msa0900040-mRNA-1
chr6_1 exon 95439488 95439620 95439488 ID=Msa0900040-mRNA-1:exon:16457;Parent=Msa0900040-mRNA-1
chr6_1 exon 95440030 95440141 95440030 ID=Msa0900040-mRNA-1:exon:16458;Parent=Msa0900040-mRNA-1
chr6_1 exon 95440253 95440320 95440253 ID=Msa0900040-mRNA-1:exon:16459;Parent=Msa0900040-mRNA-1
chr6_1 exon 95440421 95440553 95440421 ID=Msa0900040-mRNA-1:exon:16460;Parent=Msa0900040-mRNA-1
chr6_1 exon 95441424 95441523 95441424 ID=Msa0900040-mRNA-1:exon:16461;Parent=Msa0900040-mRNA-1
chr6_1 exon 95441605 95441717 95441605 ID=Msa0900040-mRNA-1:exon:16462;Parent=Msa0900040-mRNA-1
chr6_1 exon 95441799 95441892 95441799 ID=Msa0900040-mRNA-1:exon:16463;Parent=Msa0900040-mRNA-1
chr6_1 exon 95442599 95442752 95442599 ID=Msa0900040-mRNA-1:exon:16464;Parent=Msa0900040-mRNA-1
chr6_1 exon 95442881 95443024 95442881 ID=Msa0900040-mRNA-1:exon:16465;Parent=Msa0900040-mRNA-1
chr6_1 exon 95443104 95443177 95443104 ID=Msa0900040-mRNA-1:exon:16466;Parent=Msa0900040-mRNA-1
chr6_1 exon 95443675 95443763 95443675 ID=Msa0900040-mRNA-1:exon:16467;Parent=Msa0900040-mRNA-1
chr6_1 exon 95443988 95444102 95443988 ID=Msa0900040-mRNA-1:exon:16468;Parent=Msa0900040-mRNA-1
chr6_1 exon 95444396 95444758 95444396 ID=Msa0900040-mRNA-1:exon:16469;Parent=Msa0900040-mRNA-1
chr6_1 exon 95444781 95445072 95444781 ID=Msa0900040-mRNA-1:exon:16470;Parent=Msa0900040-mRNA-1
chr6_1 five_prime_UTR 95437519 95437802 95437519 ID=Msa0900040-mRNA-1:five_prime_utr;Parent=Msa0900040-mRNA-1
chr6_1 five_prime_UTR 95439488 95439526 95439488 ID=Msa0900040-mRNA-1:five_prime_utr;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95439527 95439620 95439527 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95440030 95440141 95440030 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95440253 95440320 95440253 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95440421 95440553 95440421 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95441424 95441523 95441424 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95441605 95441717 95441605 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95441799 95441892 95441799 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95442599 95442752 95442599 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95442881 95443024 95442881 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95443104 95443177 95443104 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95443675 95443763 95443675 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95443988 95444102 95443988 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 CDS 95444396 95444578 95444396 ID=Msa0900040-mRNA-1:cds;Parent=Msa0900040-mRNA-1
chr6_1 three_prime_UTR 95444579 95444758 95444579 ID=Msa0900040-mRNA-1:three_prime_utr;Parent=Msa0900040-mRNA-1
chr6_1 three_prime_UTR 95444781 95445072 95444781 ID=Msa0900040-mRNA-1:three_prime_utr;Parent=Msa0900040-mRNA-1
Gene Sequence

>Msa0900040

ATGTGGGGGCATCACCGTGAAAATTCTATTATGTACAAACGCACTCCTTCAAAAGATAATCCAAATATGGAAGAAGACGTGGAAGAAAACTTAGATCTTTTGGACAACTTCATTGATAAGGAAACCACAAATCCTTCATGGAAGCTTTCTTTACCACATGTACTTGTGGCAACTATTACTTCATTCCTATTTGGATACCATCTCGGAGTTGTTAATGAACCACTGGAGAGCATTTCTGTGGATCTTGGATTCAATGGAAATACCTTGGCAGAAGGTCTGGTGGTGAGCATATGTCTTGGTGGTGCATTGTTTGGATGTTTACTGAGTGGCTGGGTTGCTGATGCGGTGGGGCGACGCAGGGCTTTCCAGTTGTGTGCTTTGCCAATGATAATTGGTGCTGCAATGAGTGCAGCAACAAACAACTTGTTTGGCATGCTTGTAGGAAGGTTATTTGTTGGAACTGGCCTGGGCTTGGGCCCTCCTGTTGCTGCTCTCTATGTGACAGAGGTTTCTCCTGCTTTTGTGCGTGGTACCTATGGGGCATTAATCCAGATTGCAACATGCATTGGTATATTGGGATCATTATTTATTGGAATCCCTGTCAAAGAAATTTCTGGATGGTGGCGGGTTTGTTTCTGGGTATCTACCATACCTGCAGCTATACTTGCTCTGGCTATGGTCTTCTGTGCAGAGAGTCCACATTGGTTATACAAGCAAGGAAGAACTGCTGAAGCAGAAGCTGAGTTTGAAAGACTTCTGGGTGTATCCGAAGCAAAATTTGCGATGTCACAGTTATCCAAGGTAGATAGAGGAGAAGATACTGATACTGTGAAGTTCTCTGAATTGCTTCATGGTCATCATTCTAAAGTTGTTTTTATTGGATCAACCCTATTTGCTTTACAACAGCTATCTGGTATAAACGCTGTGTTTTATTTCTCTTCAACTGTTTTTAAAAGTGCTGGAGTGCCATCGGATTTTGCAAACGTCTGCATAGGAGTTGCAAATTTGACAGGATCTATCATTTCGACGGGTTTGATGGATAAACTTGGAAGGAAGGTTCTACTCTTTTGGAGTTTCTTGGGCATGGCGTTATCAATGATCATTCAAGCCACAGGAGCAAGTACACTTCTACCAACTGCAGGAGCTCTGTACCTATCTGTTGGTGGCATGCTACTGTTTGTCTTTACATTTGCTCTCGGAGCTGGCCCAGTTCCGGGTCTACTTCTAACAGAAATCTTTCCCAGTCGAATCAGAGCCAAAGCCATGGCATTCTGTATGTCCGTTCATTGGGTCATTAACTTCTTTGTTGGATTACTGTTCTTGCGTTTACTTGAGAAACTTGGTCCTCAACTGCTTTACTCAATGTTCGCCACATTCTGCTTCATGGCAGTAATTTTTGTAAAAAGAAATGTGGTGGAAACCAAAGGGAAATCACTTCAGGAAATTGAAATCGCACTTCTTCCCCAGGAATAG
Protein sequence

>Msa0900040

MWGHHRENSIMYKRTPSKDNPNMEEDVEENLDLLDNFIDKETTNPSWKLSLPHVLVATITSFLFGYHLGVVNEPLESISVDLGFNGNTLAEGLVVSICLGGALFGCLLSGWVADAVGRRRAFQLCALPMIIGAAMSAATNNLFGMLVGRLFVGTGLGLGPPVAALYVTEVSPAFVRGTYGALIQIATCIGILGSLFIGIPVKEISGWWRVCFWVSTIPAAILALAMVFCAESPHWLYKQGRTAEAEAEFERLLGVSEAKFAMSQLSKVDRGEDTDTVKFSELLHGHHSKVVFIGSTLFALQQLSGINAVFYFSSTVFKSAGVPSDFANVCIGVANLTGSIISTGLMDKLGRKVLLFWSFLGMALSMIIQATGASTLLPTAGALYLSVGGMLLFVFTFALGAGPVPGLLLTEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLLEKLGPQLLYSMFATFCFMAVIFVKRNVVETKGKSLQEIEIALLPQE*