AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0903720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903720 MtrunA17_Chr3g0092621 73.684 95 24 1 1 95 1 94 5.54e-41 134
Msa0903720 MtrunA17_Chr4g0020981 74.074 108 14 1 1 94 36 143 6.25e-41 134
Msa0903720 MtrunA17_Chr8g0356931 87.931 58 7 0 37 94 1 58 3.99e-31 106
Msa0903720 MtrunA17_Chr6g0452791 79.688 64 12 1 1 63 1 64 2.45e-27 99.0
Msa0903720 MtrunA17_Chr8g0379861 85.294 34 5 0 48 81 4 37 7.02e-14 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903720 AT4G25200.1 50.000 90 30 2 21 96 55 143 2.23e-23 90.1
Msa0903720 AT5G51440.1 53.226 62 29 0 35 96 84 145 2.22e-19 79.7

Find 140 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTTATGTATATCAATTT+TGG 0.115101 6_2:+1070260 Msa0903720:intron
ACCTTGCCTATAATGGATTT+TGG 0.152328 6_2:+1072134 Msa0903720:three_prime_UTR
CTTGAAAATGAGTTCTTTCC+TGG 0.166309 6_2:+1069877 Msa0903720:exon
CTTTAATGAGTTTGAGGTTT+TGG 0.222394 6_2:+1071711 Msa0903720:three_prime_UTR
GCTTCTTCTCGTATGTATAT+TGG 0.246519 6_2:-1071996 None:intergenic
TTGCAGGACCTTGCCTATAA+TGG 0.266525 6_2:+1072127 Msa0903720:intron
TGGAATACCGTGTATAAAAT+TGG 0.270397 6_2:-1071944 None:intergenic
GGATTCTCTGCTTCTTCGTT+TGG 0.300639 6_2:+1069725 Msa0903720:CDS
CATGACTTTGAGGATTAAAT+AGG 0.302747 6_2:+1071661 Msa0903720:three_prime_UTR
GTAACTACATATACCTTGAT+TGG 0.316784 6_2:-1070500 None:intergenic
TGATGTGCGCTAGCACCTTT+TGG 0.319026 6_2:+1072684 Msa0903720:three_prime_UTR
TAACATGGTGGATCAATTAA+TGG 0.323856 6_2:+1069626 Msa0903720:CDS
AAGATGTTGCGGTCGTGTTT+CGG 0.327259 6_2:+1072539 Msa0903720:three_prime_UTR
ATTGTCGTTGCAGACTTTAT+TGG 0.328819 6_2:+1072577 Msa0903720:three_prime_UTR
GAGCTCCCAAAATCCATTAT+AGG 0.338489 6_2:-1072140 None:intergenic
CAATGTTTCACTTGGTGCTT+GGG 0.348677 6_2:+1071795 Msa0903720:three_prime_UTR
AAAGTTTAAGATCATAATTA+AGG 0.351345 6_2:+1071843 Msa0903720:three_prime_UTR
GCGGAAGAGGCAACGGGATG+GGG 0.356857 6_2:-1069380 None:intergenic
ATCACTTTAGCAGCCATGTT+TGG 0.358929 6_2:-1069846 None:intergenic
TTTGTCAATTAGAAACTTCA+TGG 0.359450 6_2:-1071908 None:intergenic
AATTGTGAAGCTGTTGGATC+TGG 0.361694 6_2:-1069113 None:intergenic
TTTCCTCAACTGCATCCTTT+AGG 0.367963 6_2:-1072375 None:intergenic
AATGGTTCACCTCAGACAAT+AGG 0.374466 6_2:-1072218 None:intergenic
CAAAGGATGTTGAAGATGTT+GGG 0.380354 6_2:+1072458 Msa0903720:three_prime_UTR
AGCGGAAGAGGCAACGGGAT+GGG 0.383405 6_2:-1069381 None:intergenic
TTAAGGTGTGTCAAAAGGTT+AGG 0.396008 6_2:+1070432 Msa0903720:three_prime_UTR
GCTCTTTCGTTCTCTGCAAC+AGG 0.397761 6_2:+1069177 Msa0903720:five_prime_UTR
CATTAGAGTGTTCGTCGTAC+TGG 0.399113 6_2:-1069433 None:intergenic
CGCCGTGTCGATTTCCTCTC+AGG 0.400939 6_2:+1069506 Msa0903720:CDS
TTCCAACTTTAATGAGTTTG+AGG 0.403856 6_2:+1071705 Msa0903720:three_prime_UTR
CAAAAGCAAAATTAAAGAAA+AGG 0.407467 6_2:-1069800 None:intergenic
ATCCTTTAGGCCAGACTTAG+TGG 0.411249 6_2:-1072362 None:intergenic
GTCGTACTGGCGCATGGCGT+TGG 0.411881 6_2:-1069420 None:intergenic
GTCATGTTGCCATTCATGTT+TGG 0.416990 6_2:+1071637 Msa0903720:three_prime_UTR
TCTCCTCCGGCCTCCTCTCT+AGG 0.418031 6_2:+1069354 Msa0903720:five_prime_UTR
GAAGATAAAAGCAAAATTCC+AGG 0.418555 6_2:-1069895 None:intergenic
CTTCTTCGTTTGGATATGCC+TGG 0.420124 6_2:+1069735 Msa0903720:CDS
ATATCATGTGCGAATGGATC+TGG 0.420619 6_2:-1071964 None:intergenic
AAAGGTTAGGATGGAGTCAT+TGG 0.424657 6_2:+1070445 Msa0903720:three_prime_UTR
CGTTTGGATATGCCTGGACT+TGG 0.426870 6_2:+1069741 Msa0903720:CDS
ACAATGTTTCACTTGGTGCT+TGG 0.433429 6_2:+1071794 Msa0903720:three_prime_UTR
AGAGATTATTTAACCAATCA+AGG 0.437077 6_2:+1070487 Msa0903720:three_prime_UTR
CTAATAAGATCGTTGGTAAG+AGG 0.437724 6_2:+1072410 Msa0903720:three_prime_UTR
CGGTGGAGTTCGACGTGGTT+GGG 0.438472 6_2:+1069686 Msa0903720:CDS
GGGAGCTCGCTCTTGATAAG+AGG 0.439148 6_2:+1072155 Msa0903720:three_prime_UTR
TGCGGTGACTCCACTAAGTC+TGG 0.452496 6_2:+1072352 Msa0903720:three_prime_UTR
AACCTCAAACTCATTAAAGT+TGG 0.452901 6_2:-1071707 None:intergenic
CTCCACTAAGTCTGGCCTAA+AGG 0.462033 6_2:+1072360 Msa0903720:three_prime_UTR
AGAGGGCTGCTGATAGTGTT+GGG 0.464858 6_2:+1072428 Msa0903720:three_prime_UTR
GCTTCCCGTGGAATTGAATC+CGG 0.473142 6_2:+1069666 Msa0903720:CDS
AAAAGCAAAATTAAAGAAAA+GGG 0.476965 6_2:-1069799 None:intergenic
TTCCTCAATTGTGAAGCTGT+TGG 0.480566 6_2:-1069119 None:intergenic
CGGGAAGCGGAAGAGGCAAC+GGG 0.484359 6_2:-1069386 None:intergenic
CCGGTGGAGTTCGACGTGGT+TGG 0.484887 6_2:+1069685 Msa0903720:CDS
GAATGAACGGGAAGCGGAAG+AGG 0.487494 6_2:-1069393 None:intergenic
GGATATGCCTGGACTTGGTA+AGG 0.488692 6_2:+1069746 Msa0903720:CDS
CATGTTTGGACATGACTTTG+AGG 0.491339 6_2:+1071651 Msa0903720:three_prime_UTR
GGTGTTGAATGAACGGGAAG+CGG 0.494831 6_2:-1069399 None:intergenic
ATACGAGAAGAAGCTGGATT+CGG 0.495149 6_2:+1072005 Msa0903720:three_prime_UTR
TTCATGGGAGGGCTGTAAGT+TGG 0.499502 6_2:-1071892 None:intergenic
CATAGAGGAGATGGTGCGAT+GGG 0.503355 6_2:-1069267 None:intergenic
ACAAAGGATGTTGAAGATGT+TGG 0.507209 6_2:+1072457 Msa0903720:three_prime_UTR
CGAGGGAAAGAGTGATCAGC+GGG 0.512173 6_2:-1069479 None:intergenic
GGTGTGTCAAAAGGTTAGGA+TGG 0.513458 6_2:+1070436 Msa0903720:three_prime_UTR
ATCCAACAGCTTCACAATTG+AGG 0.513588 6_2:+1069117 Msa0903720:five_prime_UTR
GGGCACGCTAACCCTTGGTC+AGG 0.514937 6_2:-1071759 None:intergenic
AAGAGGGCTGCTGATAGTGT+TGG 0.516991 6_2:+1072427 Msa0903720:three_prime_UTR
AAGCGGAAGAGGCAACGGGA+TGG 0.520485 6_2:-1069382 None:intergenic
CCGTTCCTTTCTGCTTCCCG+TGG 0.522813 6_2:+1069654 Msa0903720:CDS
AAAGCGATGGAGAAGAGGTT+GGG 0.523011 6_2:-1069080 None:intergenic
GGCGTTGGTGTTGAATGAAC+GGG 0.523236 6_2:-1069405 None:intergenic
AAACGCAAATTCATTAAAGA+TGG 0.524490 6_2:-1072730 None:intergenic
TTCGAATGCTTCTGGGCCGA+CGG 0.526569 6_2:+1069315 Msa0903720:five_prime_UTR
CCAACAGTACGGATGCCAAA+AGG 0.530800 6_2:-1072699 None:intergenic
TAATAAGATCGTTGGTAAGA+GGG 0.531594 6_2:+1072411 Msa0903720:three_prime_UTR
AAGTCATGTCCAAACATGAA+TGG 0.536277 6_2:-1071646 None:intergenic
TGGTCAGGAAAATGCCTCCA+TGG 0.541689 6_2:-1071744 None:intergenic
GAGGACTACTTCATTGAAGA+TGG 0.542980 6_2:+1072174 Msa0903720:three_prime_UTR
TAGTGTTGGGTCTGCTACAA+AGG 0.545793 6_2:+1072441 Msa0903720:three_prime_UTR
AAAAGCGATGGAGAAGAGGT+TGG 0.548084 6_2:-1069081 None:intergenic
ACGGGAAGCGGAAGAGGCAA+CGG 0.548123 6_2:-1069387 None:intergenic
CAATTCCACGGGAAGCAGAA+AGG 0.549360 6_2:-1069659 None:intergenic
AGACCTAGAGAGGAGGCCGG+AGG 0.550037 6_2:-1069357 None:intergenic
CCCAAAATCCATTATAGGCA+AGG 0.559867 6_2:-1072135 None:intergenic
CGCAAATTCATTAAAGATGG+CGG 0.560661 6_2:-1072727 None:intergenic
TTGTCAATTAGAAACTTCAT+GGG 0.561009 6_2:-1071907 None:intergenic
AGGAGATGGTGCGATGGGGA+AGG 0.563473 6_2:-1069262 None:intergenic
TTCATTATATCATGTGCGAA+TGG 0.564444 6_2:-1071970 None:intergenic
GTGTTCGTCGTACTGGCGCA+TGG 0.565517 6_2:-1069426 None:intergenic
TGGCCTAAAGGATGCAGTTG+AGG 0.566538 6_2:+1072372 Msa0903720:three_prime_UTR
CCTAAAACTAATAAGATCGT+TGG 0.567174 6_2:+1072403 Msa0903720:three_prime_UTR
CTCCACCGGATTCAATTCCA+CGG 0.569030 6_2:-1069671 None:intergenic
ATATACATACGAGAAGAAGC+TGG 0.569488 6_2:+1071999 Msa0903720:three_prime_UTR
AAATCGACACGGCGAGTGCG+AGG 0.574267 6_2:-1069497 None:intergenic
ATTGTGAAGCTGTTGGATCT+GGG 0.576198 6_2:-1069112 None:intergenic
CAATTAGAAACTTCATGGGA+GGG 0.577316 6_2:-1071903 None:intergenic
CCAACCACGTCGAACTCCAC+CGG 0.577432 6_2:-1069685 None:intergenic
ATTTCTGATTTGTGAGAGAG+AGG 0.578821 6_2:-1069230 None:intergenic
GATTCGGATGAGATTAAGAA+TGG 0.580505 6_2:+1072021 Msa0903720:three_prime_UTR
GGGAGACCTAGAGAGGAGGC+CGG 0.585464 6_2:-1069360 None:intergenic
TTCTGGGCCGACGGATTCAG+CGG 0.587099 6_2:+1069324 Msa0903720:five_prime_UTR
TCCCGTGGAATTGAATCCGG+TGG 0.587739 6_2:+1069669 Msa0903720:CDS
ACGTAGGGCACGCTAACCCT+TGG 0.588442 6_2:-1071764 None:intergenic
GAAGATGGTGCTAACAGTCA+TGG 0.591507 6_2:+1072189 Msa0903720:three_prime_UTR
AATTACTTGTGCGACTGTGT+TGG 0.591562 6_2:+1070321 Msa0903720:three_prime_UTR
TCAATTAGAAACTTCATGGG+AGG 0.593578 6_2:-1071904 None:intergenic
AAAGGATGTTGAAGATGTTG+GGG 0.594085 6_2:+1072459 Msa0903720:three_prime_UTR
ACATAGAGGAGATGGTGCGA+TGG 0.595724 6_2:-1069268 None:intergenic
TGAAGCTGTTGGATCTGGGA+AGG 0.604097 6_2:-1069108 None:intergenic
CGGGATGGGGAGACCTAGAG+AGG 0.604513 6_2:-1069367 None:intergenic
GGTGAAACAAAACCCAAACA+TGG 0.609678 6_2:-1070286 None:intergenic
AATCGACACGGCGAGTGCGA+GGG 0.610716 6_2:-1069496 None:intergenic
ACTCAACGACATAGAGGAGA+TGG 0.614841 6_2:-1069276 None:intergenic
CAAGTAATTATCACACCCAA+TGG 0.616078 6_2:-1070307 None:intergenic
GAATGAAGCTTAAGATGTTG+CGG 0.618473 6_2:+1072528 Msa0903720:three_prime_UTR
AAATTCACCGCTGAATCCGT+CGG 0.622829 6_2:-1069331 None:intergenic
TGGCGTTGGTGTTGAATGAA+CGG 0.624106 6_2:-1069406 None:intergenic
TGAGATTAAGAATGGTGTGA+TGG 0.627010 6_2:+1072029 Msa0903720:three_prime_UTR
GGGAGGACGATTAGCAACAT+TGG 0.631351 6_2:-1069459 None:intergenic
GCGAGGGAAAGAGTGATCAG+CGG 0.634015 6_2:-1069480 None:intergenic
TTTCTGATTTGTGAGAGAGA+GGG 0.635782 6_2:-1069229 None:intergenic
AAACATTGTAAAAGTCACGT+AGG 0.636288 6_2:-1071780 None:intergenic
TAGACATTATATTCCAAACA+TGG 0.636663 6_2:+1069833 Msa0903720:CDS
TCCACCGGATTCAATTCCAC+GGG 0.636886 6_2:-1069670 None:intergenic
AACATTGTAAAAGTCACGTA+GGG 0.641242 6_2:-1071779 None:intergenic
TGGTACAAACCTATTGTCTG+AGG 0.644555 6_2:+1072209 Msa0903720:three_prime_UTR
CCACGGGAAGCAGAAAGGAA+CGG 0.646016 6_2:-1069654 None:intergenic
TGGCGGCTAAACCAACAGTA+CGG 0.651326 6_2:-1072710 None:intergenic
CAGGAAAGTATTGTTGAGTG+CGG 0.651583 6_2:+1072334 Msa0903720:intron
AGCAATAACAACTACCTGAG+AGG 0.655152 6_2:-1069520 None:intergenic
GCATTCGAATCAAAATGTCA+TGG 0.656159 6_2:-1069301 None:intergenic
GATGGGGAGACCTAGAGAGG+AGG 0.661315 6_2:-1069364 None:intergenic
GGGAAAGAGTGATCAGCGGG+AGG 0.672426 6_2:-1069476 None:intergenic
GAAGCTGTTGGATCTGGGAA+GGG 0.673292 6_2:-1069107 None:intergenic
TTGGTGGAAAGGAGCCATGG+AGG 0.680115 6_2:+1071730 Msa0903720:three_prime_UTR
TTGGGATGCGAAAGAGACAG+AGG 0.687221 6_2:+1069704 Msa0903720:CDS
ATGGTCACTCAACGACATAG+AGG 0.702825 6_2:-1069282 None:intergenic
ATAGAGGAGATGGTGCGATG+GGG 0.713039 6_2:-1069266 None:intergenic
GAATCCGGTGGAGTTCGACG+TGG 0.717167 6_2:+1069681 Msa0903720:CDS
TACCTGAGAGGAAATCGACA+CGG 0.726321 6_2:-1069508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTTTTTTTTAGAAA+AGG - chr6_2:1069044-1069063 None:intergenic 10.0%
!!! TTAAGTTTTTTTTTTATAAG+TGG - chr6_2:1070774-1070793 None:intergenic 10.0%
!!! TTTTTATAAGTTTATATAAG+TGG - chr6_2:1070852-1070871 None:intergenic 10.0%
!! AAAAGCAAAATTAAAGAAAA+GGG - chr6_2:1069802-1069821 None:intergenic 15.0%
!!! TTTTATCTTCAATTTTGTTT+TGG + chr6_2:1069908-1069927 Msa0903720:three_prime_UTR 15.0%
!! GTGAAAAGTAAAAAAATAAA+TGG - chr6_2:1070073-1070092 None:intergenic 15.0%
!! AACAATTTCAATAAGAATAA+AGG - chr6_2:1070593-1070612 None:intergenic 15.0%
!!! AGAAAAAAACAATAAGTTTT+AGG - chr6_2:1071407-1071426 None:intergenic 15.0%
!!! CTTAATATTGTTTTAAGTTT+TGG + chr6_2:1071546-1071565 Msa0903720:intron 15.0%
!!! AAAGTTTAAGATCATAATTA+AGG + chr6_2:1071843-1071862 Msa0903720:three_prime_UTR 15.0%
!! CAAAAGCAAAATTAAAGAAA+AGG - chr6_2:1069803-1069822 None:intergenic 20.0%
!!! CTTTTCTTTAATTTTGCTTT+TGG + chr6_2:1069801-1069820 Msa0903720:CDS 20.0%
!!! TGTCTTATGTATATCAATTT+TGG + chr6_2:1070260-1070279 Msa0903720:intron 20.0%
!!! AAAATGATGTCTAACTTTTA+AGG + chr6_2:1070415-1070434 Msa0903720:three_prime_UTR 20.0%
!!! CTATAATTTCAAGTAGTTAT+TGG + chr6_2:1070549-1070568 Msa0903720:intron 20.0%
!! TTATAAGTTTATATAAGTGG+AGG - chr6_2:1070849-1070868 None:intergenic 20.0%
!!! TATAAATCCTGCATATTTTA+CGG - chr6_2:1070944-1070963 None:intergenic 20.0%
!!! AAAAAACAATAAGTTTTAGG+TGG - chr6_2:1071404-1071423 None:intergenic 20.0%
!!! ATATATGCCAATTTTATACA+CGG + chr6_2:1071937-1071956 Msa0903720:three_prime_UTR 20.0%
!!! AAATTCTAAAGTTGTTAACA+GGG - chr6_2:1072108-1072127 None:intergenic 20.0%
!!! AAAATTCTAAAGTTGTTAAC+AGG - chr6_2:1072109-1072128 None:intergenic 20.0%
!! AATTGAACACTTAATGAATT+AGG - chr6_2:1072293-1072312 None:intergenic 20.0%
!!! TGTGTTTTTAGATGTTAACA+TGG + chr6_2:1069611-1069630 Msa0903720:intron 25.0%
! TAGACATTATATTCCAAACA+TGG + chr6_2:1069833-1069852 Msa0903720:CDS 25.0%
! GCATTTGAGAAATATTTGAA+AGG - chr6_2:1069972-1069991 None:intergenic 25.0%
! GAAGCAAAAATAATCAAAGA+AGG - chr6_2:1070160-1070179 None:intergenic 25.0%
!! TCATTTTCGTGTTAAGATAA+GGG - chr6_2:1070402-1070421 None:intergenic 25.0%
!! ATCATTTTCGTGTTAAGATA+AGG - chr6_2:1070403-1070422 None:intergenic 25.0%
! AGAGATTATTTAACCAATCA+AGG + chr6_2:1070487-1070506 Msa0903720:three_prime_UTR 25.0%
! ACTGAGTGAATATGTAAATA+GGG + chr6_2:1071115-1071134 Msa0903720:intron 25.0%
! TTTATGAGGTTTAGCAAATT+TGG + chr6_2:1071220-1071239 Msa0903720:intron 25.0%
! AATATATGAGAGCAAATAGT+AGG + chr6_2:1071261-1071280 Msa0903720:intron 25.0%
! TTGTCAATTAGAAACTTCAT+GGG - chr6_2:1071910-1071929 None:intergenic 25.0%
! TTTGTCAATTAGAAACTTCA+TGG - chr6_2:1071911-1071930 None:intergenic 25.0%
!!! TAACAACTTTAGAATTTTGC+AGG + chr6_2:1072111-1072130 Msa0903720:intron 25.0%
!!! GAGAATGTTAGATTTTTCAA+TGG - chr6_2:1072239-1072258 None:intergenic 25.0%
!!! TTTGTTTTTTTGCTACTTAC+AGG + chr6_2:1072315-1072334 Msa0903720:intron 25.0%
! AAACGCAAATTCATTAAAGA+TGG - chr6_2:1072733-1072752 None:intergenic 25.0%
!!! ATTTTGATTCGAATGCTTCT+GGG + chr6_2:1069308-1069327 Msa0903720:five_prime_UTR 30.0%
!! GTTTTTAGATGTTAACATGG+TGG + chr6_2:1069614-1069633 Msa0903720:intron 30.0%
!! TAACATGGTGGATCAATTAA+TGG + chr6_2:1069626-1069645 Msa0903720:CDS 30.0%
!!! AGAACTCATTTTCAAGTTTC+AGG - chr6_2:1069873-1069892 None:intergenic 30.0%
GAAGATAAAAGCAAAATTCC+AGG - chr6_2:1069898-1069917 None:intergenic 30.0%
ACGTTAGTTACTCAATTTCA+GGG + chr6_2:1070093-1070112 Msa0903720:intron 30.0%
GCAGAATATGTTATATTGAG+AGG + chr6_2:1070187-1070206 Msa0903720:intron 30.0%
! TCAATTTTGGATTCCATGTT+TGG + chr6_2:1070273-1070292 Msa0903720:three_prime_UTR 30.0%
! CAATTTTGGATTCCATGTTT+GGG + chr6_2:1070274-1070293 Msa0903720:three_prime_UTR 30.0%
!!! AACTTTTAAGGTGTGTCAAA+AGG + chr6_2:1070427-1070446 Msa0903720:three_prime_UTR 30.0%
GTAACTACATATACCTTGAT+TGG - chr6_2:1070503-1070522 None:intergenic 30.0%
GTGCTAATGTTTGAATTCAT+AGG + chr6_2:1070798-1070817 Msa0903720:intron 30.0%
AGTGAGTTCTTCTCTAAATT+AGG + chr6_2:1070877-1070896 Msa0903720:intron 30.0%
ATACAACACAACTACTTGAA+AGG - chr6_2:1071092-1071111 None:intergenic 30.0%
GACTGAGTGAATATGTAAAT+AGG + chr6_2:1071114-1071133 Msa0903720:intron 30.0%
ATCTATCTATAACTATCAGG+AGG - chr6_2:1071142-1071161 None:intergenic 30.0%
GCAATCTATCTATAACTATC+AGG - chr6_2:1071145-1071164 None:intergenic 30.0%
ATAGATAGATTGCGATTGAA+TGG + chr6_2:1071152-1071171 Msa0903720:intron 30.0%
AGAGTTTGATGTTAATCATG+CGG + chr6_2:1071519-1071538 Msa0903720:intron 30.0%
! CATGACTTTGAGGATTAAAT+AGG + chr6_2:1071661-1071680 Msa0903720:three_prime_UTR 30.0%
TTCCAACTTTAATGAGTTTG+AGG + chr6_2:1071705-1071724 Msa0903720:three_prime_UTR 30.0%
AACCTCAAACTCATTAAAGT+TGG - chr6_2:1071710-1071729 None:intergenic 30.0%
!! CTTTAATGAGTTTGAGGTTT+TGG + chr6_2:1071711-1071730 Msa0903720:three_prime_UTR 30.0%
AACATTGTAAAAGTCACGTA+GGG - chr6_2:1071782-1071801 None:intergenic 30.0%
AAACATTGTAAAAGTCACGT+AGG - chr6_2:1071783-1071802 None:intergenic 30.0%
! GACTTTTACAATGTTTCACT+TGG + chr6_2:1071787-1071806 Msa0903720:three_prime_UTR 30.0%
!! ACTGTAGTTTTTGTTTGGAA+TGG + chr6_2:1071820-1071839 Msa0903720:three_prime_UTR 30.0%
TGGAATACCGTGTATAAAAT+TGG - chr6_2:1071947-1071966 None:intergenic 30.0%
TTCATTATATCATGTGCGAA+TGG - chr6_2:1071973-1071992 None:intergenic 30.0%
! TCGTTTTATATCTGTTTCGT+TGG + chr6_2:1072066-1072085 Msa0903720:intron 30.0%
!!! GATCTTATTAGTTTTAGGTG+TGG - chr6_2:1072401-1072420 None:intergenic 30.0%
!!! CCAACGATCTTATTAGTTTT+AGG - chr6_2:1072406-1072425 None:intergenic 30.0%
CCTAAAACTAATAAGATCGT+TGG + chr6_2:1072403-1072422 Msa0903720:three_prime_UTR 30.0%
! TAATAAGATCGTTGGTAAGA+GGG + chr6_2:1072411-1072430 Msa0903720:three_prime_UTR 30.0%
AAAAGGAAGCCTAAAAAACG+TGG - chr6_2:1069027-1069046 None:intergenic 35.0%
! TTTCTGATTTGTGAGAGAGA+GGG - chr6_2:1069232-1069251 None:intergenic 35.0%
! ATTTCTGATTTGTGAGAGAG+AGG - chr6_2:1069233-1069252 None:intergenic 35.0%
GCATTCGAATCAAAATGTCA+TGG - chr6_2:1069304-1069323 None:intergenic 35.0%
!!! CATTTTGATTCGAATGCTTC+TGG + chr6_2:1069307-1069326 Msa0903720:five_prime_UTR 35.0%
CTTGAAAATGAGTTCTTTCC+TGG + chr6_2:1069877-1069896 Msa0903720:exon 35.0%
CACGTTAGTTACTCAATTTC+AGG + chr6_2:1070092-1070111 Msa0903720:intron 35.0%
GGAAGCCTAATGAAAAGTTT+GGG + chr6_2:1070114-1070133 Msa0903720:intron 35.0%
! CTCTACCCAAACTTTTCATT+AGG - chr6_2:1070122-1070141 None:intergenic 35.0%
CATTATCATACCTCTGCAAT+CGG - chr6_2:1070242-1070261 None:intergenic 35.0%
!!! TTTGGGTTTTGTTTCACCAT+TGG + chr6_2:1070291-1070310 Msa0903720:three_prime_UTR 35.0%
!!! TTGGGTTTTGTTTCACCATT+GGG + chr6_2:1070292-1070311 Msa0903720:three_prime_UTR 35.0%
CAAGTAATTATCACACCCAA+TGG - chr6_2:1070310-1070329 None:intergenic 35.0%
TTAAGGTGTGTCAAAAGGTT+AGG + chr6_2:1070432-1070451 Msa0903720:three_prime_UTR 35.0%
TTCAAGTAGTTATTGGTGAG+CGG + chr6_2:1070556-1070575 Msa0903720:intron 35.0%
! ACAGATAGCTCTCTCTTTTA+AGG + chr6_2:1070738-1070757 Msa0903720:intron 35.0%
GTTTATATAAGTGGAGGAGT+TGG - chr6_2:1070843-1070862 None:intergenic 35.0%
CTAAGATTTAGCAGGATTTC+AGG + chr6_2:1071180-1071199 Msa0903720:intron 35.0%
ACCTCATAAAAGCCAATGTA+CGG - chr6_2:1071210-1071229 None:intergenic 35.0%
TTATGCCATCTGAAAACCAA+GGG - chr6_2:1071365-1071384 None:intergenic 35.0%
GATGGCATAAGACTGTATTA+TGG + chr6_2:1071375-1071394 Msa0903720:intron 35.0%
TCTAACTAATCAGCAGGATT+CGG - chr6_2:1071454-1071473 None:intergenic 35.0%
GAGTTTGATGTTAATCATGC+GGG + chr6_2:1071520-1071539 Msa0903720:intron 35.0%
TTGATTTAATTCTTGCGTCC+AGG + chr6_2:1071609-1071628 Msa0903720:intron 35.0%
AAGTCATGTCCAAACATGAA+TGG - chr6_2:1071649-1071668 None:intergenic 35.0%
!! TAATGAGTTTGAGGTTTTGG+TGG + chr6_2:1071714-1071733 Msa0903720:three_prime_UTR 35.0%
CAATTAGAAACTTCATGGGA+GGG - chr6_2:1071906-1071925 None:intergenic 35.0%
TCAATTAGAAACTTCATGGG+AGG - chr6_2:1071907-1071926 None:intergenic 35.0%
GCTTCTTCTCGTATGTATAT+TGG - chr6_2:1071999-1072018 None:intergenic 35.0%
ATATACATACGAGAAGAAGC+TGG + chr6_2:1071999-1072018 Msa0903720:three_prime_UTR 35.0%
GATTCGGATGAGATTAAGAA+TGG + chr6_2:1072021-1072040 Msa0903720:three_prime_UTR 35.0%
TGAGATTAAGAATGGTGTGA+TGG + chr6_2:1072029-1072048 Msa0903720:three_prime_UTR 35.0%
ATTAAGAATGGTGTGATGGT+AGG + chr6_2:1072033-1072052 Msa0903720:intron 35.0%
TTAAGAATGGTGTGATGGTA+GGG + chr6_2:1072034-1072053 Msa0903720:intron 35.0%
!!! ACCTTGCCTATAATGGATTT+TGG + chr6_2:1072134-1072153 Msa0903720:three_prime_UTR 35.0%
!!! CCTTGCCTATAATGGATTTT+GGG + chr6_2:1072135-1072154 Msa0903720:three_prime_UTR 35.0%
AATGAATTAGGTCTCAGTGA+TGG - chr6_2:1072281-1072300 None:intergenic 35.0%
! CTAATAAGATCGTTGGTAAG+AGG + chr6_2:1072410-1072429 Msa0903720:three_prime_UTR 35.0%
ACAAAGGATGTTGAAGATGT+TGG + chr6_2:1072457-1072476 Msa0903720:three_prime_UTR 35.0%
CAAAGGATGTTGAAGATGTT+GGG + chr6_2:1072458-1072477 Msa0903720:three_prime_UTR 35.0%
AAAGGATGTTGAAGATGTTG+GGG + chr6_2:1072459-1072478 Msa0903720:three_prime_UTR 35.0%
GAATGAAGCTTAAGATGTTG+CGG + chr6_2:1072528-1072547 Msa0903720:three_prime_UTR 35.0%
ATTGTCGTTGCAGACTTTAT+TGG + chr6_2:1072577-1072596 Msa0903720:three_prime_UTR 35.0%
CGCAAATTCATTAAAGATGG+CGG - chr6_2:1072730-1072749 None:intergenic 35.0%
GAAGCCTAAAAAACGTGGAT+CGG - chr6_2:1069022-1069041 None:intergenic 40.0%
ATTGTGAAGCTGTTGGATCT+GGG - chr6_2:1069115-1069134 None:intergenic 40.0%
AATTGTGAAGCTGTTGGATC+TGG - chr6_2:1069116-1069135 None:intergenic 40.0%
ATCCAACAGCTTCACAATTG+AGG + chr6_2:1069117-1069136 Msa0903720:five_prime_UTR 40.0%
TTCCTCAATTGTGAAGCTGT+TGG - chr6_2:1069122-1069141 None:intergenic 40.0%
AGCAATAACAACTACCTGAG+AGG - chr6_2:1069523-1069542 None:intergenic 40.0%
! ACATTTTCCTTACCAAGTCC+AGG - chr6_2:1069756-1069775 None:intergenic 40.0%
ATCACTTTAGCAGCCATGTT+TGG - chr6_2:1069849-1069868 None:intergenic 40.0%
GGGAAGCCTAATGAAAAGTT+TGG + chr6_2:1070113-1070132 Msa0903720:intron 40.0%
TGAAAAGTTTGGGTAGAGCA+CGG + chr6_2:1070124-1070143 Msa0903720:intron 40.0%
GGTGAAACAAAACCCAAACA+TGG - chr6_2:1070289-1070308 None:intergenic 40.0%
AATTACTTGTGCGACTGTGT+TGG + chr6_2:1070321-1070340 Msa0903720:three_prime_UTR 40.0%
AAAGGTTAGGATGGAGTCAT+TGG + chr6_2:1070445-1070464 Msa0903720:three_prime_UTR 40.0%
! CATAGGTAGCTTTCCCTTTT+AGG + chr6_2:1070815-1070834 Msa0903720:intron 40.0%
GTCAGAAGGTCAAGCAAATA+AGG - chr6_2:1070903-1070922 None:intergenic 40.0%
! ACGTCACTTTCTAAGTCAGA+AGG - chr6_2:1070917-1070936 None:intergenic 40.0%
CGTTGTACCGTAAAATATGC+AGG + chr6_2:1070934-1070953 Msa0903720:intron 40.0%
!! TGGTGTTGCTAAGATTTAGC+AGG + chr6_2:1071172-1071191 Msa0903720:intron 40.0%
ATTTCAGGACAACCGTACAT+TGG + chr6_2:1071195-1071214 Msa0903720:intron 40.0%
!!! ACCGTACATTGGCTTTTATG+AGG + chr6_2:1071206-1071225 Msa0903720:intron 40.0%
TAGAGAAGATGTAGCAGAGT+TGG + chr6_2:1071296-1071315 Msa0903720:intron 40.0%
TGTCTAAGTTCTTTGACCCT+TGG + chr6_2:1071346-1071365 Msa0903720:intron 40.0%
!! TTTGACCCTTGGTTTTCAGA+TGG + chr6_2:1071357-1071376 Msa0903720:intron 40.0%
CTTATGCCATCTGAAAACCA+AGG - chr6_2:1071366-1071385 None:intergenic 40.0%
! ATCCTGCTGATTAGTTAGAG+AGG + chr6_2:1071455-1071474 Msa0903720:intron 40.0%
GTCATGTTGCCATTCATGTT+TGG + chr6_2:1071637-1071656 Msa0903720:three_prime_UTR 40.0%
CATGTTTGGACATGACTTTG+AGG + chr6_2:1071651-1071670 Msa0903720:three_prime_UTR 40.0%
!! AGTTTGAGGTTTTGGTGGAA+AGG + chr6_2:1071719-1071738 Msa0903720:three_prime_UTR 40.0%
!! ACAATGTTTCACTTGGTGCT+TGG + chr6_2:1071794-1071813 Msa0903720:three_prime_UTR 40.0%
!! CAATGTTTCACTTGGTGCTT+GGG + chr6_2:1071795-1071814 Msa0903720:three_prime_UTR 40.0%
! GGGTGACTGTAGTTTTTGTT+TGG + chr6_2:1071815-1071834 Msa0903720:three_prime_UTR 40.0%
ATATCATGTGCGAATGGATC+TGG - chr6_2:1071967-1071986 None:intergenic 40.0%
ATACGAGAAGAAGCTGGATT+CGG + chr6_2:1072005-1072024 Msa0903720:three_prime_UTR 40.0%
CCCAAAATCCATTATAGGCA+AGG - chr6_2:1072138-1072157 None:intergenic 40.0%
GAGCTCCCAAAATCCATTAT+AGG - chr6_2:1072143-1072162 None:intergenic 40.0%
GAGGACTACTTCATTGAAGA+TGG + chr6_2:1072174-1072193 Msa0903720:three_prime_UTR 40.0%
TGGTACAAACCTATTGTCTG+AGG + chr6_2:1072209-1072228 Msa0903720:three_prime_UTR 40.0%
AATGGTTCACCTCAGACAAT+AGG - chr6_2:1072221-1072240 None:intergenic 40.0%
!! CAGGAAAGTATTGTTGAGTG+CGG + chr6_2:1072334-1072353 Msa0903720:intron 40.0%
TTTCCTCAACTGCATCCTTT+AGG - chr6_2:1072378-1072397 None:intergenic 40.0%
!!! TCGTGTTTCGGTGTTTTCTA+TGG + chr6_2:1072551-1072570 Msa0903720:three_prime_UTR 40.0%
AAAGCGATGGAGAAGAGGTT+GGG - chr6_2:1069083-1069102 None:intergenic 45.0%
AAAAGCGATGGAGAAGAGGT+TGG - chr6_2:1069084-1069103 None:intergenic 45.0%
GTGAAAAAGCGATGGAGAAG+AGG - chr6_2:1069088-1069107 None:intergenic 45.0%
ACTCAACGACATAGAGGAGA+TGG - chr6_2:1069279-1069298 None:intergenic 45.0%
ATGGTCACTCAACGACATAG+AGG - chr6_2:1069285-1069304 None:intergenic 45.0%
AAATTCACCGCTGAATCCGT+CGG - chr6_2:1069334-1069353 None:intergenic 45.0%
!! TGGCGTTGGTGTTGAATGAA+CGG - chr6_2:1069409-1069428 None:intergenic 45.0%
! CATTAGAGTGTTCGTCGTAC+TGG - chr6_2:1069436-1069455 None:intergenic 45.0%
TACCTGAGAGGAAATCGACA+CGG - chr6_2:1069511-1069530 None:intergenic 45.0%
GGATTCTCTGCTTCTTCGTT+TGG + chr6_2:1069725-1069744 Msa0903720:CDS 45.0%
CTTCTTCGTTTGGATATGCC+TGG + chr6_2:1069735-1069754 Msa0903720:CDS 45.0%
GAAAAGTTTGGGTAGAGCAC+GGG + chr6_2:1070125-1070144 Msa0903720:intron 45.0%
GGTGTGTCAAAAGGTTAGGA+TGG + chr6_2:1070436-1070455 Msa0903720:three_prime_UTR 45.0%
GGAGGAGTTGGAACCTAAAA+GGG - chr6_2:1070831-1070850 None:intergenic 45.0%
TGGAGGAGTTGGAACCTAAA+AGG - chr6_2:1070832-1070851 None:intergenic 45.0%
CAGCAGGATTCGGATTCAAT+GGG - chr6_2:1071444-1071463 None:intergenic 45.0%
TCAGCAGGATTCGGATTCAA+TGG - chr6_2:1071445-1071464 None:intergenic 45.0%
GTCCTCTCTAACTAATCAGC+AGG - chr6_2:1071460-1071479 None:intergenic 45.0%
TTGCAGGACCTTGCCTATAA+TGG + chr6_2:1072127-1072146 Msa0903720:intron 45.0%
! GAAGATGGTGCTAACAGTCA+TGG + chr6_2:1072189-1072208 Msa0903720:three_prime_UTR 45.0%
ATCCTTTAGGCCAGACTTAG+TGG - chr6_2:1072365-1072384 None:intergenic 45.0%
! TAGTGTTGGGTCTGCTACAA+AGG + chr6_2:1072441-1072460 Msa0903720:three_prime_UTR 45.0%
AAGATGTTGCGGTCGTGTTT+CGG + chr6_2:1072539-1072558 Msa0903720:three_prime_UTR 45.0%
!! AATCAATAAAAATATAAATA+AGG - chr6_2:1071585-1071604 None:intergenic 5.0%
TGGGAAGGGTGAAAAAGCGA+TGG - chr6_2:1069096-1069115 None:intergenic 50.0%
GAAGCTGTTGGATCTGGGAA+GGG - chr6_2:1069110-1069129 None:intergenic 50.0%
TGAAGCTGTTGGATCTGGGA+AGG - chr6_2:1069111-1069130 None:intergenic 50.0%
GCTCTTTCGTTCTCTGCAAC+AGG + chr6_2:1069177-1069196 Msa0903720:five_prime_UTR 50.0%
ATAGAGGAGATGGTGCGATG+GGG - chr6_2:1069269-1069288 None:intergenic 50.0%
CATAGAGGAGATGGTGCGAT+GGG - chr6_2:1069270-1069289 None:intergenic 50.0%
ACATAGAGGAGATGGTGCGA+TGG - chr6_2:1069271-1069290 None:intergenic 50.0%
! CAGCGGTGAATTTTCTCCTC+CGG + chr6_2:1069341-1069360 Msa0903720:five_prime_UTR 50.0%
! GGTGTTGAATGAACGGGAAG+CGG - chr6_2:1069402-1069421 None:intergenic 50.0%
!! GGCGTTGGTGTTGAATGAAC+GGG - chr6_2:1069408-1069427 None:intergenic 50.0%
GGGAGGACGATTAGCAACAT+TGG - chr6_2:1069462-1069481 None:intergenic 50.0%
CAATTCCACGGGAAGCAGAA+AGG - chr6_2:1069662-1069681 None:intergenic 50.0%
GCTTCCCGTGGAATTGAATC+CGG + chr6_2:1069666-1069685 Msa0903720:CDS 50.0%
TCCACCGGATTCAATTCCAC+GGG - chr6_2:1069673-1069692 None:intergenic 50.0%
CTCCACCGGATTCAATTCCA+CGG - chr6_2:1069674-1069693 None:intergenic 50.0%
TTGGGATGCGAAAGAGACAG+AGG + chr6_2:1069704-1069723 Msa0903720:CDS 50.0%
CGTTTGGATATGCCTGGACT+TGG + chr6_2:1069741-1069760 Msa0903720:CDS 50.0%
! GGATATGCCTGGACTTGGTA+AGG + chr6_2:1069746-1069765 Msa0903720:CDS 50.0%
AGAGGTTCAAGCGACAGTTG+CGG + chr6_2:1070205-1070224 Msa0903720:intron 50.0%
TCAAGCGACAGTTGCGGTAA+AGG + chr6_2:1070211-1070230 Msa0903720:intron 50.0%
CAAGCGACAGTTGCGGTAAA+GGG + chr6_2:1070212-1070231 Msa0903720:intron 50.0%
AAGCGACAGTTGCGGTAAAG+GGG + chr6_2:1070213-1070232 Msa0903720:intron 50.0%
ATGGCAACATGACAACAGCC+TGG - chr6_2:1071630-1071649 None:intergenic 50.0%
!! GTTTTGGTGGAAAGGAGCCA+TGG + chr6_2:1071727-1071746 Msa0903720:three_prime_UTR 50.0%
TGGTCAGGAAAATGCCTCCA+TGG - chr6_2:1071747-1071766 None:intergenic 50.0%
!!! TGGAGGCATTTTCCTGACCA+AGG + chr6_2:1071747-1071766 Msa0903720:three_prime_UTR 50.0%
!!! GGAGGCATTTTCCTGACCAA+GGG + chr6_2:1071748-1071767 Msa0903720:three_prime_UTR 50.0%
TTCATGGGAGGGCTGTAAGT+TGG - chr6_2:1071895-1071914 None:intergenic 50.0%
CTCCACTAAGTCTGGCCTAA+AGG + chr6_2:1072360-1072379 Msa0903720:three_prime_UTR 50.0%
TGGCCTAAAGGATGCAGTTG+AGG + chr6_2:1072372-1072391 Msa0903720:three_prime_UTR 50.0%
! AAGAGGGCTGCTGATAGTGT+TGG + chr6_2:1072427-1072446 Msa0903720:three_prime_UTR 50.0%
! AGAGGGCTGCTGATAGTGTT+GGG + chr6_2:1072428-1072447 Msa0903720:three_prime_UTR 50.0%
! TGATGTGCGCTAGCACCTTT+TGG + chr6_2:1072684-1072703 Msa0903720:three_prime_UTR 50.0%
CCAACAGTACGGATGCCAAA+AGG - chr6_2:1072702-1072721 None:intergenic 50.0%
! CCTTTTGGCATCCGTACTGT+TGG + chr6_2:1072699-1072718 Msa0903720:three_prime_UTR 50.0%
TGGCGGCTAAACCAACAGTA+CGG - chr6_2:1072713-1072732 None:intergenic 50.0%
TTCGAATGCTTCTGGGCCGA+CGG + chr6_2:1069315-1069334 Msa0903720:five_prime_UTR 55.0%
GAATGAACGGGAAGCGGAAG+AGG - chr6_2:1069396-1069415 None:intergenic 55.0%
CGAGGGAAAGAGTGATCAGC+GGG - chr6_2:1069482-1069501 None:intergenic 55.0%
GCGAGGGAAAGAGTGATCAG+CGG - chr6_2:1069483-1069502 None:intergenic 55.0%
CCACGGGAAGCAGAAAGGAA+CGG - chr6_2:1069657-1069676 None:intergenic 55.0%
TCCCGTGGAATTGAATCCGG+TGG + chr6_2:1069669-1069688 Msa0903720:CDS 55.0%
!! AAAGGGGCATCCGATTGCAG+AGG + chr6_2:1070229-1070248 Msa0903720:intron 55.0%
TTGGTGGAAAGGAGCCATGG+AGG + chr6_2:1071730-1071749 Msa0903720:three_prime_UTR 55.0%
GGGAGCTCGCTCTTGATAAG+AGG + chr6_2:1072155-1072174 Msa0903720:three_prime_UTR 55.0%
TGCGGTGACTCCACTAAGTC+TGG + chr6_2:1072352-1072371 Msa0903720:three_prime_UTR 55.0%
AGGAGATGGTGCGATGGGGA+AGG - chr6_2:1069265-1069284 None:intergenic 60.0%
! TTCTGGGCCGACGGATTCAG+CGG + chr6_2:1069324-1069343 Msa0903720:five_prime_UTR 60.0%
GATGGGGAGACCTAGAGAGG+AGG - chr6_2:1069367-1069386 None:intergenic 60.0%
AGCGGAAGAGGCAACGGGAT+GGG - chr6_2:1069384-1069403 None:intergenic 60.0%
AAGCGGAAGAGGCAACGGGA+TGG - chr6_2:1069385-1069404 None:intergenic 60.0%
ACGGGAAGCGGAAGAGGCAA+CGG - chr6_2:1069390-1069409 None:intergenic 60.0%
! GTGTTCGTCGTACTGGCGCA+TGG - chr6_2:1069429-1069448 None:intergenic 60.0%
GGGAAAGAGTGATCAGCGGG+AGG - chr6_2:1069479-1069498 None:intergenic 60.0%
AATCGACACGGCGAGTGCGA+GGG - chr6_2:1069499-1069518 None:intergenic 60.0%
AAATCGACACGGCGAGTGCG+AGG - chr6_2:1069500-1069519 None:intergenic 60.0%
!! CGCCGTGTCGATTTCCTCTC+AGG + chr6_2:1069506-1069525 Msa0903720:CDS 60.0%
CCGTTCCTTTCTGCTTCCCG+TGG + chr6_2:1069654-1069673 Msa0903720:CDS 60.0%
GAATCCGGTGGAGTTCGACG+TGG + chr6_2:1069681-1069700 Msa0903720:CDS 60.0%
CCAACCACGTCGAACTCCAC+CGG - chr6_2:1069688-1069707 None:intergenic 60.0%
CGGTGGAGTTCGACGTGGTT+GGG + chr6_2:1069686-1069705 Msa0903720:CDS 60.0%
ACGTAGGGCACGCTAACCCT+TGG - chr6_2:1071767-1071786 None:intergenic 60.0%
TCTCCTCCGGCCTCCTCTCT+AGG + chr6_2:1069354-1069373 Msa0903720:five_prime_UTR 65.0%
AGACCTAGAGAGGAGGCCGG+AGG - chr6_2:1069360-1069379 None:intergenic 65.0%
GGGAGACCTAGAGAGGAGGC+CGG - chr6_2:1069363-1069382 None:intergenic 65.0%
CGGGATGGGGAGACCTAGAG+AGG - chr6_2:1069370-1069389 None:intergenic 65.0%
GCGGAAGAGGCAACGGGATG+GGG - chr6_2:1069383-1069402 None:intergenic 65.0%
CGGGAAGCGGAAGAGGCAAC+GGG - chr6_2:1069389-1069408 None:intergenic 65.0%
! GTCGTACTGGCGCATGGCGT+TGG - chr6_2:1069423-1069442 None:intergenic 65.0%
CCGGTGGAGTTCGACGTGGT+TGG + chr6_2:1069685-1069704 Msa0903720:CDS 65.0%
GGGCACGCTAACCCTTGGTC+AGG - chr6_2:1071762-1071781 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 1069016 1072787 1069016 ID=Msa0903720;Name=Msa0903720
chr6_2 mRNA 1069016 1072787 1069016 ID=Msa0903720-mRNA-1;Parent=Msa0903720;Name=Msa0903720-mRNA-1;_AED=0.13;_eAED=0.13;_QI=412|1|1|1|0.4|0.33|6|1278|119
chr6_2 exon 1069016 1069527 1069016 ID=Msa0903720-mRNA-1:exon:443;Parent=Msa0903720-mRNA-1
chr6_2 exon 1069622 1069954 1069622 ID=Msa0903720-mRNA-1:exon:444;Parent=Msa0903720-mRNA-1
chr6_2 exon 1070273 1070508 1070273 ID=Msa0903720-mRNA-1:exon:445;Parent=Msa0903720-mRNA-1
chr6_2 exon 1071631 1072050 1071631 ID=Msa0903720-mRNA-1:exon:446;Parent=Msa0903720-mRNA-1
chr6_2 exon 1072133 1072230 1072133 ID=Msa0903720-mRNA-1:exon:447;Parent=Msa0903720-mRNA-1
chr6_2 exon 1072337 1072787 1072337 ID=Msa0903720-mRNA-1:exon:448;Parent=Msa0903720-mRNA-1
chr6_2 five_prime_UTR 1069016 1069427 1069016 ID=Msa0903720-mRNA-1:five_prime_utr;Parent=Msa0903720-mRNA-1
chr6_2 CDS 1069428 1069527 1069428 ID=Msa0903720-mRNA-1:cds;Parent=Msa0903720-mRNA-1
chr6_2 CDS 1069622 1069881 1069622 ID=Msa0903720-mRNA-1:cds;Parent=Msa0903720-mRNA-1
chr6_2 three_prime_UTR 1069882 1069954 1069882 ID=Msa0903720-mRNA-1:three_prime_utr;Parent=Msa0903720-mRNA-1
chr6_2 three_prime_UTR 1070273 1070508 1070273 ID=Msa0903720-mRNA-1:three_prime_utr;Parent=Msa0903720-mRNA-1
chr6_2 three_prime_UTR 1071631 1072050 1071631 ID=Msa0903720-mRNA-1:three_prime_utr;Parent=Msa0903720-mRNA-1
chr6_2 three_prime_UTR 1072133 1072230 1072133 ID=Msa0903720-mRNA-1:three_prime_utr;Parent=Msa0903720-mRNA-1
chr6_2 three_prime_UTR 1072337 1072787 1072337 ID=Msa0903720-mRNA-1:three_prime_utr;Parent=Msa0903720-mRNA-1
Gene Sequence

>Msa0903720

ATGCGCCAGTACGACGAACACTCTAATGAGTCCAATGTTGCTAATCGTCCTCCCGCTGATCACTCTTTCCCTCGCACTCGCCGTGTCGATTTCCTCTCAGATGTTAACATGGTGGATCAATTAATGGACAATCCGTTCCTTTCTGCTTCCCGTGGAATTGAATCCGGTGGAGTTCGACGTGGTTGGGATGCGAAAGAGACAGAGGATTCTCTGCTTCTTCGTTTGGATATGCCTGGACTTGGTAAGGAAAATGTGAAGATATGTGTTGAACAGAATACCCTTTTCTTTAATTTTGCTTTTGGTTGTTTTGCTAGACATTATATTCCAAACATGGCTGCTAAAGTGATTCCTGAAACTTGA
Protein sequence

>Msa0903720

MRQYDEHSNESNVANRPPADHSFPRTRRVDFLSDVNMVDQLMDNPFLSASRGIESGGVRRGWDAKETEDSLLLRLDMPGLGKENVKICVEQNTLFFNFAFGCFARHYIPNMAAKVIPET*