Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906110 | XP_013450993.1 | 93.468 | 643 | 39 | 3 | 1 | 642 | 1 | 641 | 0.0 | 1103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0906110 | Msa0975320 | 0.813085 | 3.059596e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906110 | MtrunA17_Chr6g0454021 | 93.468 | 643 | 39 | 3 | 1 | 642 | 1 | 641 | 0.0 | 1103 |
| Msa0906110 | MtrunA17_Chr7g0218361 | 43.860 | 285 | 99 | 11 | 386 | 636 | 288 | 545 | 2.64e-41 | 157 |
| Msa0906110 | MtrunA17_Chr7g0218361 | 35.401 | 274 | 130 | 7 | 1 | 245 | 1 | 256 | 4.27e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906110 | AT5G39380.4 | 41.914 | 303 | 155 | 8 | 339 | 634 | 218 | 506 | 7.29e-43 | 162 |
| Msa0906110 | AT5G39380.3 | 41.914 | 303 | 155 | 8 | 339 | 634 | 218 | 506 | 7.29e-43 | 162 |
| Msa0906110 | AT5G39380.5 | 41.914 | 303 | 155 | 8 | 339 | 634 | 218 | 506 | 7.29e-43 | 162 |
| Msa0906110 | AT5G39380.2 | 41.914 | 303 | 155 | 8 | 339 | 634 | 218 | 506 | 7.29e-43 | 162 |
| Msa0906110 | AT5G39380.1 | 41.914 | 303 | 155 | 8 | 339 | 634 | 218 | 506 | 7.29e-43 | 162 |
| Msa0906110 | AT5G15430.2 | 40.678 | 236 | 116 | 7 | 414 | 641 | 259 | 478 | 1.96e-28 | 119 |
| Msa0906110 | AT5G15430.1 | 40.678 | 236 | 116 | 7 | 414 | 641 | 259 | 478 | 1.96e-28 | 119 |
| Msa0906110 | AT5G61260.1 | 48.305 | 118 | 55 | 3 | 521 | 634 | 355 | 470 | 1.58e-21 | 99.0 |
| Msa0906110 | AT5G61260.2 | 48.305 | 118 | 55 | 3 | 521 | 634 | 355 | 470 | 1.58e-21 | 99.0 |
| Msa0906110 | AT5G61260.3 | 48.305 | 118 | 55 | 3 | 521 | 634 | 355 | 470 | 1.58e-21 | 99.0 |
| Msa0906110 | AT5G07820.1 | 49.138 | 116 | 57 | 2 | 521 | 634 | 423 | 538 | 1.38e-17 | 87.0 |
Find 110 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAGCCCTTATGCTTTC+TGG | 0.094132 | 6_2:-4663367 | None:intergenic |
| TCCTGTCGTCTTGGTAATTT+TGG | 0.135721 | 6_2:-4663079 | None:intergenic |
| TGAAAATTGTGTCTCATCTT+AGG | 0.198519 | 6_2:+4663385 | Msa0906110:CDS |
| TCAACATCCTTAACCTTTCT+TGG | 0.205855 | 6_2:-4663735 | None:intergenic |
| CTTGGAATCGGCCGATATTT+TGG | 0.218154 | 6_2:-4662503 | None:intergenic |
| TGAATGAAGTTAAGGTTAAC+AGG | 0.306654 | 6_2:+4662701 | Msa0906110:CDS |
| CATTGGCATCTTTGCTGGCT+TGG | 0.307981 | 6_2:-4662572 | None:intergenic |
| GACATTGTACGTCGTCAATA+TGG | 0.316886 | 6_2:+4663470 | Msa0906110:CDS |
| CAGTGAAAGTGTTGAGTTAT+CGG | 0.334028 | 6_2:+4662225 | Msa0906110:CDS |
| ACGACCATTGGCATCTTTGC+TGG | 0.335566 | 6_2:-4662577 | None:intergenic |
| GTCAAAACCGACTCTCAAAA+AGG | 0.344434 | 6_2:+4663026 | Msa0906110:CDS |
| GAAAATTCTTGACTTGTTGA+TGG | 0.365068 | 6_2:-4662778 | None:intergenic |
| TCTAAATTCCAGAAAGCATA+AGG | 0.366044 | 6_2:+4663359 | Msa0906110:CDS |
| CTCCTAGGAAGCTTAAATTT+CGG | 0.366942 | 6_2:+4663832 | Msa0906110:CDS |
| AGATTCCTCTTGGTCTTCTT+CGG | 0.368327 | 6_2:-4663610 | None:intergenic |
| GTCAAAATCAATTGCTGGTC+AGG | 0.378512 | 6_2:+4662993 | Msa0906110:CDS |
| ACAGGTGACTTGGTTACATC+TGG | 0.379473 | 6_2:-4662253 | None:intergenic |
| TCTTCAACGTTTGCTTTCTC+TGG | 0.385250 | 6_2:-4663870 | None:intergenic |
| GCTGTCGACATCTTACTTGT+TGG | 0.386295 | 6_2:-4662526 | None:intergenic |
| TGATGGAAGTTTGTGTGTAT+TGG | 0.388134 | 6_2:-4662650 | None:intergenic |
| ACATATTGTGAATGAAGTTA+AGG | 0.394229 | 6_2:+4662693 | Msa0906110:CDS |
| ACCGAGGTTGATGAAGAAAT+AGG | 0.398487 | 6_2:-4663573 | None:intergenic |
| TCTTGTGGCTCTGTTAGGTA+TGG | 0.401105 | 6_2:-4662428 | None:intergenic |
| CTTCTGCTGCAACTAGTTGA+TGG | 0.403170 | 6_2:+4664129 | Msa0906110:CDS |
| AAAATCAACTTCTGCTAAGA+TGG | 0.403661 | 6_2:+4662900 | Msa0906110:CDS |
| TAAGATGTCGACAGCTGTAC+TGG | 0.412734 | 6_2:+4662534 | Msa0906110:CDS |
| CGACATCTTACTTGTTGGCT+TGG | 0.414022 | 6_2:-4662521 | None:intergenic |
| CTCTTGGTCTTCTTCGGACA+AGG | 0.417196 | 6_2:-4663604 | None:intergenic |
| CATGGAAAATGAGGAGACTT+TGG | 0.422673 | 6_2:+4663692 | Msa0906110:CDS |
| CTTACTTGTTGGCTTGGAAT+CGG | 0.423083 | 6_2:-4662515 | None:intergenic |
| GGCATCAGAAATTCCAGTCT+TGG | 0.423883 | 6_2:-4662620 | None:intergenic |
| CTTTCTTGTCCTCAATATCC+TGG | 0.425578 | 6_2:-4663980 | None:intergenic |
| ACTCCGTCAAAATCAATTGC+TGG | 0.435017 | 6_2:+4662988 | Msa0906110:CDS |
| TTTGTGTGTATTGGTGTCTA+AGG | 0.437460 | 6_2:-4662641 | None:intergenic |
| AGGCAAGCCAAGAAAGGTTA+AGG | 0.439930 | 6_2:+4663728 | Msa0906110:CDS |
| CTCCGAAATTTAAGCTTCCT+AGG | 0.448595 | 6_2:-4663834 | None:intergenic |
| ATATACAACTAGTGAATTTG+AGG | 0.454905 | 6_2:+4663635 | Msa0906110:CDS |
| TTGTATATTCAGATTCCTCT+TGG | 0.458877 | 6_2:-4663620 | None:intergenic |
| ATGAAGTTGAAGTTCAGAAG+AGG | 0.459456 | 6_2:+4663777 | Msa0906110:CDS |
| GAATCGGTTGATTCCAAGAC+TGG | 0.460800 | 6_2:+4662607 | Msa0906110:CDS |
| TTCTTTGGAGTTGACTTCGA+TGG | 0.469547 | 6_2:-4662862 | None:intergenic |
| CAACACTCTCTTGTGAACTT+TGG | 0.470867 | 6_2:-4662462 | None:intergenic |
| GATCGCCAAGTCCAAAATAT+CGG | 0.473961 | 6_2:+4662492 | Msa0906110:CDS |
| GGAGCATGCATTTGCTTCAA+AGG | 0.474858 | 6_2:+4662396 | Msa0906110:CDS |
| TGTTAAAGAAATGAAGTTGT+CGG | 0.488086 | 6_2:+4663128 | Msa0906110:CDS |
| CGATAACTCAACACTTTCAC+TGG | 0.489360 | 6_2:-4662224 | None:intergenic |
| TGAAGTTGAAGTTCAGAAGA+GGG | 0.492571 | 6_2:+4663778 | Msa0906110:CDS |
| ATTTCTTTAACATTTAAAGA+AGG | 0.493773 | 6_2:-4663117 | None:intergenic |
| TTTGAGACACCAGGATATTG+AGG | 0.500031 | 6_2:+4663971 | Msa0906110:CDS |
| TCTGCCGGCAAGGCTAGCTC+TGG | 0.502054 | 6_2:+4662295 | Msa0906110:CDS |
| CAATACTACAAGCAAAGAAA+AGG | 0.505742 | 6_2:+4663944 | Msa0906110:CDS |
| GAAGAGCAAGGTTAAAGCAT+TGG | 0.507524 | 6_2:+4664064 | Msa0906110:CDS |
| TTTGTCCTCAAAACCTTCTG+AGG | 0.507912 | 6_2:-4663217 | None:intergenic |
| ATCGAAGTCAACTCCAAAGA+AGG | 0.513550 | 6_2:+4662864 | Msa0906110:CDS |
| CAATGAAGTTCCTGTCGTCT+TGG | 0.525699 | 6_2:-4663088 | None:intergenic |
| ACGTTGAAGATGACGGCGAA+AGG | 0.526867 | 6_2:+4663883 | Msa0906110:CDS |
| AATGGTCGTACTCAAAGAAT+CGG | 0.529464 | 6_2:+4662591 | Msa0906110:CDS |
| TGAATCATCATCATCATAGC+TGG | 0.529493 | 6_2:-4663529 | None:intergenic |
| GTCAAAGTGGATTCCCAAGA+AGG | 0.530990 | 6_2:+4662930 | Msa0906110:CDS |
| ACCTATTTCTTCATCAACCT+CGG | 0.533692 | 6_2:+4663572 | Msa0906110:CDS |
| CTAAATTCCAGAAAGCATAA+GGG | 0.537264 | 6_2:+4663360 | Msa0906110:CDS |
| ACCTTCTGAGGAACTCATAG+AGG | 0.537772 | 6_2:-4663205 | None:intergenic |
| AAAGAAAGGCAAGCCAAGAA+AGG | 0.539034 | 6_2:+4663722 | Msa0906110:CDS |
| GCCAAAATTACCAAGACGAC+AGG | 0.542305 | 6_2:+4663078 | Msa0906110:CDS |
| CATCAACTAGTTGCAGCAGA+AGG | 0.543444 | 6_2:-4664128 | None:intergenic |
| GTTCACAAGAGAGTGTTGGC+AGG | 0.544323 | 6_2:+4662467 | Msa0906110:CDS |
| TCCATCAAAATCAGTTGTCA+AGG | 0.544963 | 6_2:+4662666 | Msa0906110:CDS |
| AAGAAATAGCGAGATCAAGA+TGG | 0.547145 | 6_2:+4663239 | Msa0906110:CDS |
| CAAGTAAACTTGTTGAAGCT+AGG | 0.547894 | 6_2:+4664042 | Msa0906110:CDS |
| AGCAAGGTTAAAGCATTGGT+TGG | 0.549179 | 6_2:+4664068 | Msa0906110:CDS |
| AATCGAATGCATGGAAAATG+AGG | 0.550501 | 6_2:+4663683 | Msa0906110:CDS |
| TGCGACTTCGGTATGAGTGA+TGG | 0.551613 | 6_2:-4662748 | None:intergenic |
| CAGGTGACTTGGTTACATCT+GGG | 0.551958 | 6_2:-4662252 | None:intergenic |
| ATCAAAATCAACTTCTGCGA+AGG | 0.560457 | 6_2:+4662831 | Msa0906110:CDS |
| GCTTTGGAAGTTGATCTCGA+TGG | 0.566119 | 6_2:-4663057 | None:intergenic |
| ATTGTTGAATAATGTGATTG+AGG | 0.568995 | 6_2:+4664013 | Msa0906110:CDS |
| AAGAAGGCATTCTGCCGGCA+AGG | 0.569562 | 6_2:+4662285 | Msa0906110:CDS |
| CATTATCTCAGAGCTTCCAC+CGG | 0.570323 | 6_2:+4662343 | Msa0906110:CDS |
| GATTCTTTGAGTACGACCAT+TGG | 0.570728 | 6_2:-4662589 | None:intergenic |
| ACACAACAACAATGAGGTAG+AGG | 0.572979 | 6_2:+4663443 | Msa0906110:CDS |
| CAGGAAGAAAACATCGGTAG+AGG | 0.573059 | 6_2:+4662720 | Msa0906110:CDS |
| GATGGAGAAGTATGCGACTT+CGG | 0.573442 | 6_2:-4662760 | None:intergenic |
| AAAATCAATTGCTGGTCAGG+TGG | 0.587796 | 6_2:+4662996 | Msa0906110:CDS |
| TTCATCATCAACTGATAAGG+AGG | 0.591859 | 6_2:+4662798 | Msa0906110:CDS |
| TCCTCTATGAGTTCCTCAGA+AGG | 0.592693 | 6_2:+4663204 | Msa0906110:CDS |
| AAATAGGTGTGGACAACTGA+GGG | 0.601697 | 6_2:-4663557 | None:intergenic |
| AAAGCAAACGTTGAAGATGA+CGG | 0.605478 | 6_2:+4663876 | Msa0906110:CDS |
| TGTTGAAGCTAGGAAGAGCA+AGG | 0.606594 | 6_2:+4664052 | Msa0906110:CDS |
| AAGCTGTGAAATCGAATGCA+TGG | 0.606916 | 6_2:+4663674 | Msa0906110:CDS |
| TTCACAAGAGAGTGTTGGCA+GGG | 0.607114 | 6_2:+4662468 | Msa0906110:CDS |
| GGTTAAGGATGTTGAAGACA+AGG | 0.611830 | 6_2:+4663743 | Msa0906110:CDS |
| AGATGGAAACTCTGTCAAAG+TGG | 0.612123 | 6_2:+4662917 | Msa0906110:CDS |
| ACTCTTATAAGAGAAGCTCT+CGG | 0.620143 | 6_2:-4663330 | None:intergenic |
| TGAATTCGAATCGTGTCGCA+AGG | 0.620776 | 6_2:+4663169 | Msa0906110:CDS |
| ACTTTGGAAGATGAAAAGAA+AGG | 0.632200 | 6_2:+4663708 | Msa0906110:CDS |
| AAAGTGGATTCCCAAGAAGG+TGG | 0.632882 | 6_2:+4662933 | Msa0906110:CDS |
| CAAAGTTCACAAGAGAGTGT+TGG | 0.633891 | 6_2:+4662463 | Msa0906110:CDS |
| GAAATAGGTGTGGACAACTG+AGG | 0.643340 | 6_2:-4663558 | None:intergenic |
| GGTTGATGAAGAAATAGGTG+TGG | 0.652125 | 6_2:-4663568 | None:intergenic |
| CAAGCCAGCAAAGATGCCAA+TGG | 0.654673 | 6_2:+4662573 | Msa0906110:CDS |
| AGGTGACTTGGTTACATCTG+GGG | 0.663671 | 6_2:-4662251 | None:intergenic |
| GTGGAAGCTCTGAGATAATG+CGG | 0.668722 | 6_2:-4662340 | None:intergenic |
| CTTGTCCGAAGAAGACCAAG+AGG | 0.676569 | 6_2:+4663605 | Msa0906110:CDS |
| ATCATCATCATCATAGCTGG+CGG | 0.676822 | 6_2:-4663526 | None:intergenic |
| TAGGTGTGGACAACTGAGGG+AGG | 0.688644 | 6_2:-4663554 | None:intergenic |
| GGACAAGGATTGAGTAACCG+AGG | 0.690449 | 6_2:-4663589 | None:intergenic |
| TGATGAACACAACAACAATG+AGG | 0.690822 | 6_2:+4663437 | Msa0906110:CDS |
| AAAATCATGACAGGAACCGG+TGG | 0.692986 | 6_2:-4662359 | None:intergenic |
| GGTTAACAGGAAGAAAACAT+CGG | 0.695692 | 6_2:+4662714 | Msa0906110:CDS |
| GAGGACAAGAAAGATGCACA+AGG | 0.728477 | 6_2:+4663990 | Msa0906110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTTAACATTTAAAGA+AGG | - | chr6_2:4663120-4663139 | None:intergenic | 15.0% |
| !! | ATTTCTTTAACATTTAAAGA+AGG | - | chr6_2:4663120-4663139 | None:intergenic | 15.0% |
| !! | ATATTTACAAAAATCATGAC+AGG | - | chr6_2:4662371-4662390 | None:intergenic | 20.0% |
| !!! | TGTCATGATTTTTGTAAATA+TGG | + | chr6_2:4662370-4662389 | Msa0906110:CDS | 20.0% |
| !!! | TGATTTTTGTAAATATGGAA+AGG | + | chr6_2:4662375-4662394 | Msa0906110:CDS | 20.0% |
| !! | ATATTTACAAAAATCATGAC+AGG | - | chr6_2:4662371-4662390 | None:intergenic | 20.0% |
| !!! | TGTCATGATTTTTGTAAATA+TGG | + | chr6_2:4662370-4662389 | Msa0906110:CDS | 20.0% |
| !!! | TGATTTTTGTAAATATGGAA+AGG | + | chr6_2:4662375-4662394 | Msa0906110:CDS | 20.0% |
| ! | ACATATTGTGAATGAAGTTA+AGG | + | chr6_2:4662693-4662712 | Msa0906110:CDS | 25.0% |
| !! | ATTTTCATCATCAACTGATA+AGG | + | chr6_2:4662795-4662814 | Msa0906110:CDS | 25.0% |
| ! | TGTTAAAGAAATGAAGTTGT+CGG | + | chr6_2:4663128-4663147 | Msa0906110:CDS | 25.0% |
| ! | ATATACAACTAGTGAATTTG+AGG | + | chr6_2:4663635-4663654 | Msa0906110:CDS | 25.0% |
| ! | AAATTGAGAAAAATACTCCT+AGG | + | chr6_2:4663817-4663836 | Msa0906110:CDS | 25.0% |
| ! | ATTGTTGAATAATGTGATTG+AGG | + | chr6_2:4664013-4664032 | Msa0906110:CDS | 25.0% |
| ! | ACATATTGTGAATGAAGTTA+AGG | + | chr6_2:4662693-4662712 | Msa0906110:CDS | 25.0% |
| !! | ATTTTCATCATCAACTGATA+AGG | + | chr6_2:4662795-4662814 | Msa0906110:CDS | 25.0% |
| ! | TGTTAAAGAAATGAAGTTGT+CGG | + | chr6_2:4663128-4663147 | Msa0906110:CDS | 25.0% |
| ! | ATATACAACTAGTGAATTTG+AGG | + | chr6_2:4663635-4663654 | Msa0906110:CDS | 25.0% |
| ! | AAATTGAGAAAAATACTCCT+AGG | + | chr6_2:4663817-4663836 | Msa0906110:CDS | 25.0% |
| ! | ATTGTTGAATAATGTGATTG+AGG | + | chr6_2:4664013-4664032 | Msa0906110:CDS | 25.0% |
| TGAATGAAGTTAAGGTTAAC+AGG | + | chr6_2:4662701-4662720 | Msa0906110:CDS | 30.0% | |
| !! | GAAAATTCTTGACTTGTTGA+TGG | - | chr6_2:4662781-4662800 | None:intergenic | 30.0% |
| !! | TTAGCAGAAGTTGATTTTGA+TGG | - | chr6_2:4662898-4662917 | None:intergenic | 30.0% |
| AAAATCAACTTCTGCTAAGA+TGG | + | chr6_2:4662900-4662919 | Msa0906110:CDS | 30.0% | |
| ! | TTTTGACGGAGTTAATACAT+TGG | - | chr6_2:4662980-4662999 | None:intergenic | 30.0% |
| ! | ATAGGTGATATCAGTTTTCT+TGG | - | chr6_2:4663294-4663313 | None:intergenic | 30.0% |
| ! | GGAGATGATAAAGCTTTTAT+AGG | - | chr6_2:4663312-4663331 | None:intergenic | 30.0% |
| ! | TCTAAATTCCAGAAAGCATA+AGG | + | chr6_2:4663359-4663378 | Msa0906110:CDS | 30.0% |
| ! | CTAAATTCCAGAAAGCATAA+GGG | + | chr6_2:4663360-4663379 | Msa0906110:CDS | 30.0% |
| TGAAAATTGTGTCTCATCTT+AGG | + | chr6_2:4663385-4663404 | Msa0906110:CDS | 30.0% | |
| TTGTATATTCAGATTCCTCT+TGG | - | chr6_2:4663623-4663642 | None:intergenic | 30.0% | |
| ! | ACTTTGGAAGATGAAAAGAA+AGG | + | chr6_2:4663708-4663727 | Msa0906110:CDS | 30.0% |
| CAATACTACAAGCAAAGAAA+AGG | + | chr6_2:4663944-4663963 | Msa0906110:CDS | 30.0% | |
| TGAATGAAGTTAAGGTTAAC+AGG | + | chr6_2:4662701-4662720 | Msa0906110:CDS | 30.0% | |
| !! | GAAAATTCTTGACTTGTTGA+TGG | - | chr6_2:4662781-4662800 | None:intergenic | 30.0% |
| !! | TTAGCAGAAGTTGATTTTGA+TGG | - | chr6_2:4662898-4662917 | None:intergenic | 30.0% |
| AAAATCAACTTCTGCTAAGA+TGG | + | chr6_2:4662900-4662919 | Msa0906110:CDS | 30.0% | |
| ! | TTTTGACGGAGTTAATACAT+TGG | - | chr6_2:4662980-4662999 | None:intergenic | 30.0% |
| ! | ATAGGTGATATCAGTTTTCT+TGG | - | chr6_2:4663294-4663313 | None:intergenic | 30.0% |
| ! | GGAGATGATAAAGCTTTTAT+AGG | - | chr6_2:4663312-4663331 | None:intergenic | 30.0% |
| ! | TCTAAATTCCAGAAAGCATA+AGG | + | chr6_2:4663359-4663378 | Msa0906110:CDS | 30.0% |
| ! | CTAAATTCCAGAAAGCATAA+GGG | + | chr6_2:4663360-4663379 | Msa0906110:CDS | 30.0% |
| TGAAAATTGTGTCTCATCTT+AGG | + | chr6_2:4663385-4663404 | Msa0906110:CDS | 30.0% | |
| TTGTATATTCAGATTCCTCT+TGG | - | chr6_2:4663623-4663642 | None:intergenic | 30.0% | |
| ! | ACTTTGGAAGATGAAAAGAA+AGG | + | chr6_2:4663708-4663727 | Msa0906110:CDS | 30.0% |
| CAATACTACAAGCAAAGAAA+AGG | + | chr6_2:4663944-4663963 | Msa0906110:CDS | 30.0% | |
| !! | CAGTGAAAGTGTTGAGTTAT+CGG | + | chr6_2:4662225-4662244 | Msa0906110:CDS | 35.0% |
| !! | TTTTTCAATCACAGGTGACT+TGG | - | chr6_2:4662266-4662285 | None:intergenic | 35.0% |
| CACCTGTGATTGAAAAAAGA+AGG | + | chr6_2:4662269-4662288 | Msa0906110:CDS | 35.0% | |
| !!! | TGCCTTCTTTTTTCAATCAC+AGG | - | chr6_2:4662274-4662293 | None:intergenic | 35.0% |
| ACAAAAATCATGACAGGAAC+CGG | - | chr6_2:4662365-4662384 | None:intergenic | 35.0% | |
| AATGGTCGTACTCAAAGAAT+CGG | + | chr6_2:4662591-4662610 | Msa0906110:CDS | 35.0% | |
| ! | TTTGTGTGTATTGGTGTCTA+AGG | - | chr6_2:4662644-4662663 | None:intergenic | 35.0% |
| TGATGGAAGTTTGTGTGTAT+TGG | - | chr6_2:4662653-4662672 | None:intergenic | 35.0% | |
| TCCATCAAAATCAGTTGTCA+AGG | + | chr6_2:4662666-4662685 | Msa0906110:CDS | 35.0% | |
| !! | TCCTTGACAACTGATTTTGA+TGG | - | chr6_2:4662670-4662689 | None:intergenic | 35.0% |
| GGTTAACAGGAAGAAAACAT+CGG | + | chr6_2:4662714-4662733 | Msa0906110:CDS | 35.0% | |
| TTCATCATCAACTGATAAGG+AGG | + | chr6_2:4662798-4662817 | Msa0906110:CDS | 35.0% | |
| ATCAAAATCAACTTCTGCGA+AGG | + | chr6_2:4662831-4662850 | Msa0906110:CDS | 35.0% | |
| ! | GATGTATTTTCCACCTTCTT+GGG | - | chr6_2:4662946-4662965 | None:intergenic | 35.0% |
| ! | TGATGTATTTTCCACCTTCT+TGG | - | chr6_2:4662947-4662966 | None:intergenic | 35.0% |
| !! | TGACCAGCAATTGATTTTGA+CGG | - | chr6_2:4662994-4663013 | None:intergenic | 35.0% |
| !! | TTTTCCACCTTTTTGAGAGT+CGG | - | chr6_2:4663036-4663055 | None:intergenic | 35.0% |
| AAGAAATAGCGAGATCAAGA+TGG | + | chr6_2:4663239-4663258 | Msa0906110:CDS | 35.0% | |
| ! | TGATATCAGTTTTCTTGGAG+CGG | - | chr6_2:4663289-4663308 | None:intergenic | 35.0% |
| ACTCTTATAAGAGAAGCTCT+CGG | - | chr6_2:4663333-4663352 | None:intergenic | 35.0% | |
| TGATGAACACAACAACAATG+AGG | + | chr6_2:4663437-4663456 | Msa0906110:CDS | 35.0% | |
| TGAATCATCATCATCATAGC+TGG | - | chr6_2:4663532-4663551 | None:intergenic | 35.0% | |
| ! | ACCTATTTCTTCATCAACCT+CGG | + | chr6_2:4663572-4663591 | Msa0906110:CDS | 35.0% |
| AATCGAATGCATGGAAAATG+AGG | + | chr6_2:4663683-4663702 | Msa0906110:CDS | 35.0% | |
| TCAACATCCTTAACCTTTCT+TGG | - | chr6_2:4663738-4663757 | None:intergenic | 35.0% | |
| ATGAAGTTGAAGTTCAGAAG+AGG | + | chr6_2:4663777-4663796 | Msa0906110:CDS | 35.0% | |
| TGAAGTTGAAGTTCAGAAGA+GGG | + | chr6_2:4663778-4663797 | Msa0906110:CDS | 35.0% | |
| CTCCTAGGAAGCTTAAATTT+CGG | + | chr6_2:4663832-4663851 | Msa0906110:CDS | 35.0% | |
| AAAGCAAACGTTGAAGATGA+CGG | + | chr6_2:4663876-4663895 | Msa0906110:CDS | 35.0% | |
| !! | CAAGTAAACTTGTTGAAGCT+AGG | + | chr6_2:4664042-4664061 | Msa0906110:CDS | 35.0% |
| !! | CAGTGAAAGTGTTGAGTTAT+CGG | + | chr6_2:4662225-4662244 | Msa0906110:CDS | 35.0% |
| !! | TTTTTCAATCACAGGTGACT+TGG | - | chr6_2:4662266-4662285 | None:intergenic | 35.0% |
| CACCTGTGATTGAAAAAAGA+AGG | + | chr6_2:4662269-4662288 | Msa0906110:CDS | 35.0% | |
| !!! | TGCCTTCTTTTTTCAATCAC+AGG | - | chr6_2:4662274-4662293 | None:intergenic | 35.0% |
| ACAAAAATCATGACAGGAAC+CGG | - | chr6_2:4662365-4662384 | None:intergenic | 35.0% | |
| AATGGTCGTACTCAAAGAAT+CGG | + | chr6_2:4662591-4662610 | Msa0906110:CDS | 35.0% | |
| ! | TTTGTGTGTATTGGTGTCTA+AGG | - | chr6_2:4662644-4662663 | None:intergenic | 35.0% |
| TGATGGAAGTTTGTGTGTAT+TGG | - | chr6_2:4662653-4662672 | None:intergenic | 35.0% | |
| TCCATCAAAATCAGTTGTCA+AGG | + | chr6_2:4662666-4662685 | Msa0906110:CDS | 35.0% | |
| !! | TCCTTGACAACTGATTTTGA+TGG | - | chr6_2:4662670-4662689 | None:intergenic | 35.0% |
| GGTTAACAGGAAGAAAACAT+CGG | + | chr6_2:4662714-4662733 | Msa0906110:CDS | 35.0% | |
| TTCATCATCAACTGATAAGG+AGG | + | chr6_2:4662798-4662817 | Msa0906110:CDS | 35.0% | |
| ATCAAAATCAACTTCTGCGA+AGG | + | chr6_2:4662831-4662850 | Msa0906110:CDS | 35.0% | |
| ! | GATGTATTTTCCACCTTCTT+GGG | - | chr6_2:4662946-4662965 | None:intergenic | 35.0% |
| ! | TGATGTATTTTCCACCTTCT+TGG | - | chr6_2:4662947-4662966 | None:intergenic | 35.0% |
| !! | TGACCAGCAATTGATTTTGA+CGG | - | chr6_2:4662994-4663013 | None:intergenic | 35.0% |
| !! | TTTTCCACCTTTTTGAGAGT+CGG | - | chr6_2:4663036-4663055 | None:intergenic | 35.0% |
| AAGAAATAGCGAGATCAAGA+TGG | + | chr6_2:4663239-4663258 | Msa0906110:CDS | 35.0% | |
| ! | TGATATCAGTTTTCTTGGAG+CGG | - | chr6_2:4663289-4663308 | None:intergenic | 35.0% |
| ACTCTTATAAGAGAAGCTCT+CGG | - | chr6_2:4663333-4663352 | None:intergenic | 35.0% | |
| TGATGAACACAACAACAATG+AGG | + | chr6_2:4663437-4663456 | Msa0906110:CDS | 35.0% | |
| TGAATCATCATCATCATAGC+TGG | - | chr6_2:4663532-4663551 | None:intergenic | 35.0% | |
| ! | ACCTATTTCTTCATCAACCT+CGG | + | chr6_2:4663572-4663591 | Msa0906110:CDS | 35.0% |
| AATCGAATGCATGGAAAATG+AGG | + | chr6_2:4663683-4663702 | Msa0906110:CDS | 35.0% | |
| TCAACATCCTTAACCTTTCT+TGG | - | chr6_2:4663738-4663757 | None:intergenic | 35.0% | |
| ATGAAGTTGAAGTTCAGAAG+AGG | + | chr6_2:4663777-4663796 | Msa0906110:CDS | 35.0% | |
| TGAAGTTGAAGTTCAGAAGA+GGG | + | chr6_2:4663778-4663797 | Msa0906110:CDS | 35.0% | |
| CTCCTAGGAAGCTTAAATTT+CGG | + | chr6_2:4663832-4663851 | Msa0906110:CDS | 35.0% | |
| AAAGCAAACGTTGAAGATGA+CGG | + | chr6_2:4663876-4663895 | Msa0906110:CDS | 35.0% | |
| !! | CAAGTAAACTTGTTGAAGCT+AGG | + | chr6_2:4664042-4664061 | Msa0906110:CDS | 35.0% |
| CGATAACTCAACACTTTCAC+TGG | - | chr6_2:4662227-4662246 | None:intergenic | 40.0% | |
| !! | GAAAAAAGAAGGCATTCTGC+CGG | + | chr6_2:4662280-4662299 | Msa0906110:CDS | 40.0% |
| !! | TGTTTTCTTGTGGCTCTGTT+AGG | - | chr6_2:4662436-4662455 | None:intergenic | 40.0% |
| !! | TTGGTGAAGCTGTTTTCTTG+TGG | - | chr6_2:4662446-4662465 | None:intergenic | 40.0% |
| CAACACTCTCTTGTGAACTT+TGG | - | chr6_2:4662465-4662484 | None:intergenic | 40.0% | |
| ! | CAAAGTTCACAAGAGAGTGT+TGG | + | chr6_2:4662463-4662482 | Msa0906110:CDS | 40.0% |
| GATCGCCAAGTCCAAAATAT+CGG | + | chr6_2:4662492-4662511 | Msa0906110:CDS | 40.0% | |
| !! | CTTACTTGTTGGCTTGGAAT+CGG | - | chr6_2:4662518-4662537 | None:intergenic | 40.0% |
| GATTCTTTGAGTACGACCAT+TGG | - | chr6_2:4662592-4662611 | None:intergenic | 40.0% | |
| !! | TTCTTTGGAGTTGACTTCGA+TGG | - | chr6_2:4662865-4662884 | None:intergenic | 40.0% |
| ATCGAAGTCAACTCCAAAGA+AGG | + | chr6_2:4662864-4662883 | Msa0906110:CDS | 40.0% | |
| ! | GATGGAGTTTTCACCTTCTT+TGG | - | chr6_2:4662880-4662899 | None:intergenic | 40.0% |
| AGATGGAAACTCTGTCAAAG+TGG | + | chr6_2:4662917-4662936 | Msa0906110:CDS | 40.0% | |
| ACTCCGTCAAAATCAATTGC+TGG | + | chr6_2:4662988-4663007 | Msa0906110:CDS | 40.0% | |
| GTCAAAATCAATTGCTGGTC+AGG | + | chr6_2:4662993-4663012 | Msa0906110:CDS | 40.0% | |
| AAAATCAATTGCTGGTCAGG+TGG | + | chr6_2:4662996-4663015 | Msa0906110:CDS | 40.0% | |
| ! | GTCAAAACCGACTCTCAAAA+AGG | + | chr6_2:4663026-4663045 | Msa0906110:CDS | 40.0% |
| ! | AAAACCGACTCTCAAAAAGG+TGG | + | chr6_2:4663029-4663048 | Msa0906110:CDS | 40.0% |
| !!! | CGTCTTGGTAATTTTGGCTT+TGG | - | chr6_2:4663076-4663095 | None:intergenic | 40.0% |
| !! | TCCTGTCGTCTTGGTAATTT+TGG | - | chr6_2:4663082-4663101 | None:intergenic | 40.0% |
| TTTGTCCTCAAAACCTTCTG+AGG | - | chr6_2:4663220-4663239 | None:intergenic | 40.0% | |
| TTTCAAGCCCTTATGCTTTC+TGG | - | chr6_2:4663370-4663389 | None:intergenic | 40.0% | |
| ACACAACAACAATGAGGTAG+AGG | + | chr6_2:4663443-4663462 | Msa0906110:CDS | 40.0% | |
| GACATTGTACGTCGTCAATA+TGG | + | chr6_2:4663470-4663489 | Msa0906110:CDS | 40.0% | |
| ATCATCATCATCATAGCTGG+CGG | - | chr6_2:4663529-4663548 | None:intergenic | 40.0% | |
| AAATAGGTGTGGACAACTGA+GGG | - | chr6_2:4663560-4663579 | None:intergenic | 40.0% | |
| !! | GGTTGATGAAGAAATAGGTG+TGG | - | chr6_2:4663571-4663590 | None:intergenic | 40.0% |
| !! | ACCGAGGTTGATGAAGAAAT+AGG | - | chr6_2:4663576-4663595 | None:intergenic | 40.0% |
| ! | AGATTCCTCTTGGTCTTCTT+CGG | - | chr6_2:4663613-4663632 | None:intergenic | 40.0% |
| AAGCTGTGAAATCGAATGCA+TGG | + | chr6_2:4663674-4663693 | Msa0906110:CDS | 40.0% | |
| CATGGAAAATGAGGAGACTT+TGG | + | chr6_2:4663692-4663711 | Msa0906110:CDS | 40.0% | |
| AAAGAAAGGCAAGCCAAGAA+AGG | + | chr6_2:4663722-4663741 | Msa0906110:CDS | 40.0% | |
| GGTTAAGGATGTTGAAGACA+AGG | + | chr6_2:4663743-4663762 | Msa0906110:CDS | 40.0% | |
| CTCCGAAATTTAAGCTTCCT+AGG | - | chr6_2:4663837-4663856 | None:intergenic | 40.0% | |
| TCTTCAACGTTTGCTTTCTC+TGG | - | chr6_2:4663873-4663892 | None:intergenic | 40.0% | |
| !!! | AAAGGTTGTTTTGAGACACC+AGG | + | chr6_2:4663962-4663981 | Msa0906110:CDS | 40.0% |
| ! | TTTGAGACACCAGGATATTG+AGG | + | chr6_2:4663971-4663990 | Msa0906110:CDS | 40.0% |
| CTTTCTTGTCCTCAATATCC+TGG | - | chr6_2:4663983-4664002 | None:intergenic | 40.0% | |
| GAAGAGCAAGGTTAAAGCAT+TGG | + | chr6_2:4664064-4664083 | Msa0906110:CDS | 40.0% | |
| !! | AGCAAGGTTAAAGCATTGGT+TGG | + | chr6_2:4664068-4664087 | Msa0906110:CDS | 40.0% |
| CGATAACTCAACACTTTCAC+TGG | - | chr6_2:4662227-4662246 | None:intergenic | 40.0% | |
| !! | GAAAAAAGAAGGCATTCTGC+CGG | + | chr6_2:4662280-4662299 | Msa0906110:CDS | 40.0% |
| !! | TGTTTTCTTGTGGCTCTGTT+AGG | - | chr6_2:4662436-4662455 | None:intergenic | 40.0% |
| !! | TTGGTGAAGCTGTTTTCTTG+TGG | - | chr6_2:4662446-4662465 | None:intergenic | 40.0% |
| CAACACTCTCTTGTGAACTT+TGG | - | chr6_2:4662465-4662484 | None:intergenic | 40.0% | |
| ! | CAAAGTTCACAAGAGAGTGT+TGG | + | chr6_2:4662463-4662482 | Msa0906110:CDS | 40.0% |
| GATCGCCAAGTCCAAAATAT+CGG | + | chr6_2:4662492-4662511 | Msa0906110:CDS | 40.0% | |
| !! | CTTACTTGTTGGCTTGGAAT+CGG | - | chr6_2:4662518-4662537 | None:intergenic | 40.0% |
| GATTCTTTGAGTACGACCAT+TGG | - | chr6_2:4662592-4662611 | None:intergenic | 40.0% | |
| !! | TTCTTTGGAGTTGACTTCGA+TGG | - | chr6_2:4662865-4662884 | None:intergenic | 40.0% |
| ATCGAAGTCAACTCCAAAGA+AGG | + | chr6_2:4662864-4662883 | Msa0906110:CDS | 40.0% | |
| ! | GATGGAGTTTTCACCTTCTT+TGG | - | chr6_2:4662880-4662899 | None:intergenic | 40.0% |
| AGATGGAAACTCTGTCAAAG+TGG | + | chr6_2:4662917-4662936 | Msa0906110:CDS | 40.0% | |
| ACTCCGTCAAAATCAATTGC+TGG | + | chr6_2:4662988-4663007 | Msa0906110:CDS | 40.0% | |
| GTCAAAATCAATTGCTGGTC+AGG | + | chr6_2:4662993-4663012 | Msa0906110:CDS | 40.0% | |
| AAAATCAATTGCTGGTCAGG+TGG | + | chr6_2:4662996-4663015 | Msa0906110:CDS | 40.0% | |
| ! | GTCAAAACCGACTCTCAAAA+AGG | + | chr6_2:4663026-4663045 | Msa0906110:CDS | 40.0% |
| ! | AAAACCGACTCTCAAAAAGG+TGG | + | chr6_2:4663029-4663048 | Msa0906110:CDS | 40.0% |
| !!! | CGTCTTGGTAATTTTGGCTT+TGG | - | chr6_2:4663076-4663095 | None:intergenic | 40.0% |
| !! | TCCTGTCGTCTTGGTAATTT+TGG | - | chr6_2:4663082-4663101 | None:intergenic | 40.0% |
| TTTGTCCTCAAAACCTTCTG+AGG | - | chr6_2:4663220-4663239 | None:intergenic | 40.0% | |
| TTTCAAGCCCTTATGCTTTC+TGG | - | chr6_2:4663370-4663389 | None:intergenic | 40.0% | |
| ACACAACAACAATGAGGTAG+AGG | + | chr6_2:4663443-4663462 | Msa0906110:CDS | 40.0% | |
| GACATTGTACGTCGTCAATA+TGG | + | chr6_2:4663470-4663489 | Msa0906110:CDS | 40.0% | |
| ATCATCATCATCATAGCTGG+CGG | - | chr6_2:4663529-4663548 | None:intergenic | 40.0% | |
| AAATAGGTGTGGACAACTGA+GGG | - | chr6_2:4663560-4663579 | None:intergenic | 40.0% | |
| !! | GGTTGATGAAGAAATAGGTG+TGG | - | chr6_2:4663571-4663590 | None:intergenic | 40.0% |
| !! | ACCGAGGTTGATGAAGAAAT+AGG | - | chr6_2:4663576-4663595 | None:intergenic | 40.0% |
| ! | AGATTCCTCTTGGTCTTCTT+CGG | - | chr6_2:4663613-4663632 | None:intergenic | 40.0% |
| AAGCTGTGAAATCGAATGCA+TGG | + | chr6_2:4663674-4663693 | Msa0906110:CDS | 40.0% | |
| CATGGAAAATGAGGAGACTT+TGG | + | chr6_2:4663692-4663711 | Msa0906110:CDS | 40.0% | |
| AAAGAAAGGCAAGCCAAGAA+AGG | + | chr6_2:4663722-4663741 | Msa0906110:CDS | 40.0% | |
| GGTTAAGGATGTTGAAGACA+AGG | + | chr6_2:4663743-4663762 | Msa0906110:CDS | 40.0% | |
| CTCCGAAATTTAAGCTTCCT+AGG | - | chr6_2:4663837-4663856 | None:intergenic | 40.0% | |
| TCTTCAACGTTTGCTTTCTC+TGG | - | chr6_2:4663873-4663892 | None:intergenic | 40.0% | |
| !!! | AAAGGTTGTTTTGAGACACC+AGG | + | chr6_2:4663962-4663981 | Msa0906110:CDS | 40.0% |
| ! | TTTGAGACACCAGGATATTG+AGG | + | chr6_2:4663971-4663990 | Msa0906110:CDS | 40.0% |
| CTTTCTTGTCCTCAATATCC+TGG | - | chr6_2:4663983-4664002 | None:intergenic | 40.0% | |
| GAAGAGCAAGGTTAAAGCAT+TGG | + | chr6_2:4664064-4664083 | Msa0906110:CDS | 40.0% | |
| !! | AGCAAGGTTAAAGCATTGGT+TGG | + | chr6_2:4664068-4664087 | Msa0906110:CDS | 40.0% |
| !! | AGGTGACTTGGTTACATCTG+GGG | - | chr6_2:4662254-4662273 | None:intergenic | 45.0% |
| !! | CAGGTGACTTGGTTACATCT+GGG | - | chr6_2:4662255-4662274 | None:intergenic | 45.0% |
| !! | ACAGGTGACTTGGTTACATC+TGG | - | chr6_2:4662256-4662275 | None:intergenic | 45.0% |
| !! | GTGGAAGCTCTGAGATAATG+CGG | - | chr6_2:4662343-4662362 | None:intergenic | 45.0% |
| CATTATCTCAGAGCTTCCAC+CGG | + | chr6_2:4662343-4662362 | Msa0906110:CDS | 45.0% | |
| AAAATCATGACAGGAACCGG+TGG | - | chr6_2:4662362-4662381 | None:intergenic | 45.0% | |
| GGAGCATGCATTTGCTTCAA+AGG | + | chr6_2:4662396-4662415 | Msa0906110:CDS | 45.0% | |
| ! | TCTTGTGGCTCTGTTAGGTA+TGG | - | chr6_2:4662431-4662450 | None:intergenic | 45.0% |
| !! | TTCACAAGAGAGTGTTGGCA+GGG | + | chr6_2:4662468-4662487 | Msa0906110:CDS | 45.0% |
| !! | ATCGGCCGATATTTTGGACT+TGG | - | chr6_2:4662500-4662519 | None:intergenic | 45.0% |
| ! | CTTGGAATCGGCCGATATTT+TGG | - | chr6_2:4662506-4662525 | None:intergenic | 45.0% |
| ! | CGACATCTTACTTGTTGGCT+TGG | - | chr6_2:4662524-4662543 | None:intergenic | 45.0% |
| GCTGTCGACATCTTACTTGT+TGG | - | chr6_2:4662529-4662548 | None:intergenic | 45.0% | |
| TAAGATGTCGACAGCTGTAC+TGG | + | chr6_2:4662534-4662553 | Msa0906110:CDS | 45.0% | |
| ! | GAATCGGTTGATTCCAAGAC+TGG | + | chr6_2:4662607-4662626 | Msa0906110:CDS | 45.0% |
| GGCATCAGAAATTCCAGTCT+TGG | - | chr6_2:4662623-4662642 | None:intergenic | 45.0% | |
| CAGGAAGAAAACATCGGTAG+AGG | + | chr6_2:4662720-4662739 | Msa0906110:CDS | 45.0% | |
| ! | GATGGAGAAGTATGCGACTT+CGG | - | chr6_2:4662763-4662782 | None:intergenic | 45.0% |
| ! | GTCAAAGTGGATTCCCAAGA+AGG | + | chr6_2:4662930-4662949 | Msa0906110:CDS | 45.0% |
| ! | AAAGTGGATTCCCAAGAAGG+TGG | + | chr6_2:4662933-4662952 | Msa0906110:CDS | 45.0% |
| !! | GCTTTGGAAGTTGATCTCGA+TGG | - | chr6_2:4663060-4663079 | None:intergenic | 45.0% |
| GCCAAAATTACCAAGACGAC+AGG | + | chr6_2:4663078-4663097 | Msa0906110:CDS | 45.0% | |
| CAATGAAGTTCCTGTCGTCT+TGG | - | chr6_2:4663091-4663110 | None:intergenic | 45.0% | |
| TGAATTCGAATCGTGTCGCA+AGG | + | chr6_2:4663169-4663188 | Msa0906110:CDS | 45.0% | |
| TCCTCTATGAGTTCCTCAGA+AGG | + | chr6_2:4663204-4663223 | Msa0906110:CDS | 45.0% | |
| ! | ACCTTCTGAGGAACTCATAG+AGG | - | chr6_2:4663208-4663227 | None:intergenic | 45.0% |
| ! | GAGTTCCTCAGAAGGTTTTG+AGG | + | chr6_2:4663212-4663231 | Msa0906110:CDS | 45.0% |
| !!! | TTTCTTGGAGCGGTTTTGGA+GGG | - | chr6_2:4663279-4663298 | None:intergenic | 45.0% |
| !! | TTTTCTTGGAGCGGTTTTGG+AGG | - | chr6_2:4663280-4663299 | None:intergenic | 45.0% |
| ! | CAGTTTTCTTGGAGCGGTTT+TGG | - | chr6_2:4663283-4663302 | None:intergenic | 45.0% |
| GAAATAGGTGTGGACAACTG+AGG | - | chr6_2:4663561-4663580 | None:intergenic | 45.0% | |
| AGGCAAGCCAAGAAAGGTTA+AGG | + | chr6_2:4663728-4663747 | Msa0906110:CDS | 45.0% | |
| GAGGACAAGAAAGATGCACA+AGG | + | chr6_2:4663990-4664009 | Msa0906110:CDS | 45.0% | |
| TGTTGAAGCTAGGAAGAGCA+AGG | + | chr6_2:4664052-4664071 | Msa0906110:CDS | 45.0% | |
| !! | AGGTGACTTGGTTACATCTG+GGG | - | chr6_2:4662254-4662273 | None:intergenic | 45.0% |
| !! | CAGGTGACTTGGTTACATCT+GGG | - | chr6_2:4662255-4662274 | None:intergenic | 45.0% |
| !! | ACAGGTGACTTGGTTACATC+TGG | - | chr6_2:4662256-4662275 | None:intergenic | 45.0% |
| !! | GTGGAAGCTCTGAGATAATG+CGG | - | chr6_2:4662343-4662362 | None:intergenic | 45.0% |
| CATTATCTCAGAGCTTCCAC+CGG | + | chr6_2:4662343-4662362 | Msa0906110:CDS | 45.0% | |
| AAAATCATGACAGGAACCGG+TGG | - | chr6_2:4662362-4662381 | None:intergenic | 45.0% | |
| GGAGCATGCATTTGCTTCAA+AGG | + | chr6_2:4662396-4662415 | Msa0906110:CDS | 45.0% | |
| ! | TCTTGTGGCTCTGTTAGGTA+TGG | - | chr6_2:4662431-4662450 | None:intergenic | 45.0% |
| !! | TTCACAAGAGAGTGTTGGCA+GGG | + | chr6_2:4662468-4662487 | Msa0906110:CDS | 45.0% |
| !! | ATCGGCCGATATTTTGGACT+TGG | - | chr6_2:4662500-4662519 | None:intergenic | 45.0% |
| ! | CTTGGAATCGGCCGATATTT+TGG | - | chr6_2:4662506-4662525 | None:intergenic | 45.0% |
| ! | CGACATCTTACTTGTTGGCT+TGG | - | chr6_2:4662524-4662543 | None:intergenic | 45.0% |
| GCTGTCGACATCTTACTTGT+TGG | - | chr6_2:4662529-4662548 | None:intergenic | 45.0% | |
| TAAGATGTCGACAGCTGTAC+TGG | + | chr6_2:4662534-4662553 | Msa0906110:CDS | 45.0% | |
| ! | GAATCGGTTGATTCCAAGAC+TGG | + | chr6_2:4662607-4662626 | Msa0906110:CDS | 45.0% |
| GGCATCAGAAATTCCAGTCT+TGG | - | chr6_2:4662623-4662642 | None:intergenic | 45.0% | |
| CAGGAAGAAAACATCGGTAG+AGG | + | chr6_2:4662720-4662739 | Msa0906110:CDS | 45.0% | |
| ! | GATGGAGAAGTATGCGACTT+CGG | - | chr6_2:4662763-4662782 | None:intergenic | 45.0% |
| ! | GTCAAAGTGGATTCCCAAGA+AGG | + | chr6_2:4662930-4662949 | Msa0906110:CDS | 45.0% |
| ! | AAAGTGGATTCCCAAGAAGG+TGG | + | chr6_2:4662933-4662952 | Msa0906110:CDS | 45.0% |
| !! | GCTTTGGAAGTTGATCTCGA+TGG | - | chr6_2:4663060-4663079 | None:intergenic | 45.0% |
| GCCAAAATTACCAAGACGAC+AGG | + | chr6_2:4663078-4663097 | Msa0906110:CDS | 45.0% | |
| CAATGAAGTTCCTGTCGTCT+TGG | - | chr6_2:4663091-4663110 | None:intergenic | 45.0% | |
| TGAATTCGAATCGTGTCGCA+AGG | + | chr6_2:4663169-4663188 | Msa0906110:CDS | 45.0% | |
| TCCTCTATGAGTTCCTCAGA+AGG | + | chr6_2:4663204-4663223 | Msa0906110:CDS | 45.0% | |
| ! | ACCTTCTGAGGAACTCATAG+AGG | - | chr6_2:4663208-4663227 | None:intergenic | 45.0% |
| ! | GAGTTCCTCAGAAGGTTTTG+AGG | + | chr6_2:4663212-4663231 | Msa0906110:CDS | 45.0% |
| !!! | TTTCTTGGAGCGGTTTTGGA+GGG | - | chr6_2:4663279-4663298 | None:intergenic | 45.0% |
| !! | TTTTCTTGGAGCGGTTTTGG+AGG | - | chr6_2:4663280-4663299 | None:intergenic | 45.0% |
| ! | CAGTTTTCTTGGAGCGGTTT+TGG | - | chr6_2:4663283-4663302 | None:intergenic | 45.0% |
| GAAATAGGTGTGGACAACTG+AGG | - | chr6_2:4663561-4663580 | None:intergenic | 45.0% | |
| AGGCAAGCCAAGAAAGGTTA+AGG | + | chr6_2:4663728-4663747 | Msa0906110:CDS | 45.0% | |
| GAGGACAAGAAAGATGCACA+AGG | + | chr6_2:4663990-4664009 | Msa0906110:CDS | 45.0% | |
| TGTTGAAGCTAGGAAGAGCA+AGG | + | chr6_2:4664052-4664071 | Msa0906110:CDS | 45.0% | |
| !!! | TTTTCCAGAGCTAGCCTTGC+CGG | - | chr6_2:4662302-4662321 | None:intergenic | 50.0% |
| !! | GTTCACAAGAGAGTGTTGGC+AGG | + | chr6_2:4662467-4662486 | Msa0906110:CDS | 50.0% |
| ! | CATTGGCATCTTTGCTGGCT+TGG | - | chr6_2:4662575-4662594 | None:intergenic | 50.0% |
| CAAGCCAGCAAAGATGCCAA+TGG | + | chr6_2:4662573-4662592 | Msa0906110:CDS | 50.0% | |
| ACGACCATTGGCATCTTTGC+TGG | - | chr6_2:4662580-4662599 | None:intergenic | 50.0% | |
| TGCGACTTCGGTATGAGTGA+TGG | - | chr6_2:4662751-4662770 | None:intergenic | 50.0% | |
| !!! | TTCTTGGAGCGGTTTTGGAG+GGG | - | chr6_2:4663278-4663297 | None:intergenic | 50.0% |
| GGACAAGGATTGAGTAACCG+AGG | - | chr6_2:4663592-4663611 | None:intergenic | 50.0% | |
| ! | CTCTTGGTCTTCTTCGGACA+AGG | - | chr6_2:4663607-4663626 | None:intergenic | 50.0% |
| CTTGTCCGAAGAAGACCAAG+AGG | + | chr6_2:4663605-4663624 | Msa0906110:CDS | 50.0% | |
| ! | ACGTTGAAGATGACGGCGAA+AGG | + | chr6_2:4663883-4663902 | Msa0906110:CDS | 50.0% |
| !!! | TTTTCCAGAGCTAGCCTTGC+CGG | - | chr6_2:4662302-4662321 | None:intergenic | 50.0% |
| !! | GTTCACAAGAGAGTGTTGGC+AGG | + | chr6_2:4662467-4662486 | Msa0906110:CDS | 50.0% |
| ! | CATTGGCATCTTTGCTGGCT+TGG | - | chr6_2:4662575-4662594 | None:intergenic | 50.0% |
| CAAGCCAGCAAAGATGCCAA+TGG | + | chr6_2:4662573-4662592 | Msa0906110:CDS | 50.0% | |
| ACGACCATTGGCATCTTTGC+TGG | - | chr6_2:4662580-4662599 | None:intergenic | 50.0% | |
| TGCGACTTCGGTATGAGTGA+TGG | - | chr6_2:4662751-4662770 | None:intergenic | 50.0% | |
| !!! | TTCTTGGAGCGGTTTTGGAG+GGG | - | chr6_2:4663278-4663297 | None:intergenic | 50.0% |
| GGACAAGGATTGAGTAACCG+AGG | - | chr6_2:4663592-4663611 | None:intergenic | 50.0% | |
| ! | CTCTTGGTCTTCTTCGGACA+AGG | - | chr6_2:4663607-4663626 | None:intergenic | 50.0% |
| CTTGTCCGAAGAAGACCAAG+AGG | + | chr6_2:4663605-4663624 | Msa0906110:CDS | 50.0% | |
| ! | ACGTTGAAGATGACGGCGAA+AGG | + | chr6_2:4663883-4663902 | Msa0906110:CDS | 50.0% |
| !! | AAGAAGGCATTCTGCCGGCA+AGG | + | chr6_2:4662285-4662304 | Msa0906110:CDS | 55.0% |
| !!! | TCTTGGAGCGGTTTTGGAGG+GGG | - | chr6_2:4663277-4663296 | None:intergenic | 55.0% |
| TAGGTGTGGACAACTGAGGG+AGG | - | chr6_2:4663557-4663576 | None:intergenic | 55.0% | |
| !! | AAGAAGGCATTCTGCCGGCA+AGG | + | chr6_2:4662285-4662304 | Msa0906110:CDS | 55.0% |
| !!! | TCTTGGAGCGGTTTTGGAGG+GGG | - | chr6_2:4663277-4663296 | None:intergenic | 55.0% |
| TAGGTGTGGACAACTGAGGG+AGG | - | chr6_2:4663557-4663576 | None:intergenic | 55.0% | |
| ! | TCTGCCGGCAAGGCTAGCTC+TGG | + | chr6_2:4662295-4662314 | Msa0906110:CDS | 65.0% |
| ! | TCTGCCGGCAAGGCTAGCTC+TGG | + | chr6_2:4662295-4662314 | Msa0906110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 4662220 | 4664148 | 4662220 | ID=Msa0906110;Name=Msa0906110 |
| chr6_2 | mRNA | 4662220 | 4664148 | 4662220 | ID=Msa0906110-mRNA-1;Parent=Msa0906110;Name=Msa0906110-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|642 |
| chr6_2 | exon | 4662220 | 4664148 | 4662220 | ID=Msa0906110-mRNA-1:exon:1320;Parent=Msa0906110-mRNA-1 |
| chr6_2 | CDS | 4662220 | 4664148 | 4662220 | ID=Msa0906110-mRNA-1:cds;Parent=Msa0906110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
