Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918040 | XP_013443435.1 | 94.291 | 508 | 15 | 1 | 1 | 494 | 1 | 508 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918040 | sp|Q8NBL1|PGLT1_HUMAN | 25.217 | 345 | 218 | 10 | 94 | 412 | 42 | 372 | 2.33e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0890170 | Msa0918040 | 0.809339 | 1.987285e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918040 | MtrunA17_Chr6g0471441 | 94.291 | 508 | 15 | 1 | 1 | 494 | 1 | 508 | 0.0 | 993 |
| Msa0918040 | MtrunA17_Chr8g0349361 | 54.990 | 491 | 198 | 6 | 16 | 491 | 30 | 512 | 0.0 | 561 |
| Msa0918040 | MtrunA17_Chr5g0397701 | 59.861 | 431 | 141 | 6 | 75 | 488 | 84 | 499 | 0.0 | 541 |
| Msa0918040 | MtrunA17_Chr8g0349371 | 58.050 | 441 | 165 | 6 | 68 | 491 | 58 | 495 | 0.0 | 536 |
| Msa0918040 | MtrunA17_Chr8g0349241 | 52.225 | 427 | 189 | 2 | 68 | 480 | 63 | 488 | 4.13e-175 | 501 |
| Msa0918040 | MtrunA17_Chr7g0247261 | 51.825 | 411 | 180 | 3 | 67 | 460 | 34 | 443 | 2.22e-164 | 472 |
| Msa0918040 | MtrunA17_Chr7g0247251 | 52.273 | 396 | 172 | 2 | 82 | 460 | 1 | 396 | 3.26e-159 | 457 |
| Msa0918040 | MtrunA17_Chr3g0104841 | 42.482 | 419 | 213 | 9 | 56 | 458 | 59 | 465 | 1.49e-120 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918040 | AT5G23850.1 | 63.696 | 460 | 142 | 4 | 52 | 491 | 84 | 538 | 0.0 | 634 |
| Msa0918040 | AT3G48980.2 | 59.592 | 490 | 166 | 6 | 26 | 491 | 60 | 541 | 0.0 | 624 |
| Msa0918040 | AT3G48980.1 | 59.592 | 490 | 166 | 6 | 26 | 491 | 54 | 535 | 0.0 | 624 |
| Msa0918040 | AT2G45830.4 | 52.941 | 459 | 192 | 5 | 49 | 486 | 58 | 513 | 8.73e-175 | 502 |
| Msa0918040 | AT2G45830.1 | 52.941 | 459 | 192 | 5 | 49 | 486 | 58 | 513 | 8.73e-175 | 502 |
| Msa0918040 | AT1G63420.1 | 52.577 | 485 | 198 | 8 | 35 | 489 | 94 | 576 | 2.71e-173 | 500 |
| Msa0918040 | AT3G61270.1 | 54.587 | 436 | 181 | 4 | 74 | 493 | 63 | 497 | 2.30e-171 | 492 |
| Msa0918040 | AT2G45840.1 | 47.648 | 489 | 226 | 9 | 18 | 490 | 43 | 517 | 2.73e-159 | 462 |
| Msa0918040 | AT3G61280.1 | 50.225 | 444 | 197 | 7 | 71 | 493 | 96 | 536 | 5.00e-156 | 454 |
| Msa0918040 | AT2G45830.3 | 55.795 | 371 | 150 | 1 | 130 | 486 | 2 | 372 | 6.26e-156 | 449 |
| Msa0918040 | AT2G45830.6 | 55.795 | 371 | 150 | 1 | 130 | 486 | 2 | 372 | 6.26e-156 | 449 |
| Msa0918040 | AT2G45830.2 | 55.795 | 371 | 150 | 1 | 130 | 486 | 2 | 372 | 6.26e-156 | 449 |
| Msa0918040 | AT2G45830.5 | 55.795 | 371 | 150 | 1 | 130 | 486 | 2 | 372 | 6.26e-156 | 449 |
| Msa0918040 | AT3G61270.2 | 55.820 | 378 | 152 | 2 | 130 | 493 | 2 | 378 | 8.74e-153 | 441 |
| Msa0918040 | AT3G61290.1 | 48.284 | 437 | 202 | 6 | 74 | 491 | 17 | 448 | 3.22e-150 | 437 |
| Msa0918040 | AT1G07220.1 | 43.061 | 490 | 254 | 8 | 14 | 485 | 18 | 500 | 1.02e-136 | 404 |
| Msa0918040 | AT1G63420.2 | 53.005 | 366 | 145 | 7 | 35 | 375 | 94 | 457 | 4.08e-125 | 373 |
| Msa0918040 | AT3G61280.2 | 50.965 | 259 | 107 | 4 | 71 | 311 | 96 | 352 | 6.55e-86 | 269 |
Find 151 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCAACGAGTCGAATTT+TGG | 0.137804 | 6_2:-44225968 | Msa0918040:CDS |
| GTGTTTCATCTATTTGATTC+AGG | 0.154542 | 6_2:+44229174 | None:intergenic |
| GCACTTATCATCTTCCTTAA+TGG | 0.156124 | 6_2:+44226856 | None:intergenic |
| CATCATATGCTTTGTTTGTT+AGG | 0.178052 | 6_2:+44229213 | None:intergenic |
| CATGGCTTTACGTTGGTTTC+AGG | 0.187681 | 6_2:+44227927 | None:intergenic |
| AGAGAGAACCTTATGCTTAT+TGG | 0.195357 | 6_2:-44227851 | Msa0918040:CDS |
| CTTCATCAGGCACACGAAAT+TGG | 0.200194 | 6_2:-44226278 | Msa0918040:intron |
| AATGATTAATATTGCTTATA+TGG | 0.213900 | 6_2:+44234827 | None:intergenic |
| CACCGCCGTATTGGTGTTTC+CGG | 0.223078 | 6_2:-44233845 | Msa0918040:CDS |
| TTCAAGTTAGTGATATTAAA+AGG | 0.223320 | 6_2:-44228927 | Msa0918040:CDS |
| CTTTCCATATAGAGTTCTTT+TGG | 0.225388 | 6_2:-44225788 | Msa0918040:three_prime_UTR |
| CTTTGAAATGATTCTTCAAT+TGG | 0.225628 | 6_2:+44234075 | None:intergenic |
| CCAATCCACAGCAAACTTAA+TGG | 0.238967 | 6_2:+44226829 | None:intergenic |
| ATTTCAAAGTTTGCATCTTT+TGG | 0.241187 | 6_2:-44234061 | Msa0918040:five_prime_UTR |
| TTGTGTCCACTGCAATTTAA+TGG | 0.253844 | 6_2:+44229122 | None:intergenic |
| CACGAGATTCAACTTCAAAA+AGG | 0.264191 | 6_2:-44234750 | Msa0918040:five_prime_UTR |
| CACTTATCATCTTCCTTAAT+GGG | 0.289974 | 6_2:+44226857 | None:intergenic |
| CCCTGGAAAATTGCCTGATT+TGG | 0.290452 | 6_2:-44228817 | Msa0918040:CDS |
| ATATATTGTGTGTAGATATA+AGG | 0.302904 | 6_2:-44227011 | Msa0918040:intron |
| CATTAAGTTTGCTGTGGATT+GGG | 0.302941 | 6_2:-44226828 | Msa0918040:CDS |
| CTACCCAAAAGAACTCTATA+TGG | 0.308846 | 6_2:+44225784 | None:intergenic |
| AACTACAGATCGGGGCAATT+TGG | 0.316681 | 6_2:-44233909 | Msa0918040:five_prime_UTR |
| AAAATTTATGATGGAATCAT+TGG | 0.337555 | 6_2:-44226081 | Msa0918040:CDS |
| GCATCACTATTGGCCCATTA+AGG | 0.337833 | 6_2:-44226870 | Msa0918040:CDS |
| CTCTTGTCTTGTGTTGTTTG+CGG | 0.347957 | 6_2:+44234511 | None:intergenic |
| ATGGGATCTCTATTTGATTC+CGG | 0.355113 | 6_2:+44229141 | None:intergenic |
| ACAGCTTTGTCACTTATTGA+TGG | 0.355715 | 6_2:+44226152 | None:intergenic |
| TAATTCCAGTGCATCACTAT+TGG | 0.356873 | 6_2:-44226880 | Msa0918040:CDS |
| TGTCAATTCAAAAGGAAGAT+TGG | 0.366786 | 6_2:+44234722 | None:intergenic |
| CCCATGGTCTTAAATCTTCA+TGG | 0.376118 | 6_2:+44229003 | None:intergenic |
| TCATTCAAATAATTCATTGC+AGG | 0.377250 | 6_2:-44234809 | Msa0918040:five_prime_UTR |
| TATGCTTTGTTTGTTAGGAT+TGG | 0.380455 | 6_2:+44229218 | None:intergenic |
| TGAGGTTTGGTCAATTTGAT+TGG | 0.380740 | 6_2:+44234103 | None:intergenic |
| TCAATTGGGTCATTGAGGTT+TGG | 0.386502 | 6_2:+44234090 | None:intergenic |
| TGAGATGGTGGGATTGTTTG+TGG | 0.387432 | 6_2:+44229082 | None:intergenic |
| CCATTAAGTTTGCTGTGGAT+TGG | 0.393313 | 6_2:-44226829 | Msa0918040:CDS |
| TGTGTCCACTGCAATTTAAT+GGG | 0.393402 | 6_2:+44229123 | None:intergenic |
| AAAGCCATGGGAGATTCTAT+TGG | 0.400359 | 6_2:-44227913 | Msa0918040:CDS |
| GTCAATTCAAAAGGAAGATT+GGG | 0.400982 | 6_2:+44234723 | None:intergenic |
| AAGAAGCTCCAAACATCAAA+AGG | 0.402455 | 6_2:-44234025 | Msa0918040:five_prime_UTR |
| TGTTTCATCTATTTGATTCA+GGG | 0.403554 | 6_2:+44229175 | None:intergenic |
| TATTCACTACTTGGAACAAC+TGG | 0.407345 | 6_2:+44228768 | None:intergenic |
| CTGATTGGTCCTTCTGGGGA+TGG | 0.409600 | 6_2:-44228668 | Msa0918040:intron |
| GTCTTGATTGTTTGTTGAGA+TGG | 0.410670 | 6_2:+44229067 | None:intergenic |
| CTTATTTGTGCGTTCAAAGA+TGG | 0.411408 | 6_2:+44226005 | None:intergenic |
| TGGATCCAACGGAAGTAATC+AGG | 0.412790 | 6_2:+44229023 | None:intergenic |
| TTCCCTTTCCAATAAGCATA+AGG | 0.415343 | 6_2:+44227843 | None:intergenic |
| TTTGAAATGATTCTTCAATT+GGG | 0.422730 | 6_2:+44234076 | None:intergenic |
| AAATACTCACAGGTGTTTCC+AGG | 0.423491 | 6_2:+44233785 | None:intergenic |
| TTATGTTTGATTGTGTTGAT+TGG | 0.429597 | 6_2:-44228791 | Msa0918040:CDS |
| AACCTTATGCTTATTGGAAA+GGG | 0.437741 | 6_2:-44227845 | Msa0918040:CDS |
| GGTCCACTATATTCACTACT+TGG | 0.437884 | 6_2:+44228759 | None:intergenic |
| AGATATAAGGTTTACATTGA+AGG | 0.440520 | 6_2:-44226998 | Msa0918040:CDS |
| GTTACTCCTGTGTGGGCCCA+TGG | 0.441775 | 6_2:+44228987 | None:intergenic |
| TGTCTTGTTTCAGCAACACT+TGG | 0.442376 | 6_2:+44227819 | None:intergenic |
| TCAAACATAAGCTCCAAATC+AGG | 0.443617 | 6_2:+44228804 | None:intergenic |
| GGGAGAGAAAACTACAGATC+GGG | 0.453187 | 6_2:-44233918 | Msa0918040:five_prime_UTR |
| GAGATGGTGGGATTGTTTGT+GGG | 0.454598 | 6_2:+44229083 | None:intergenic |
| TTCCTTTGTTACTCCTGTGT+GGG | 0.461786 | 6_2:+44228980 | None:intergenic |
| AAGCCATGGGAGATTCTATT+GGG | 0.465925 | 6_2:-44227912 | Msa0918040:CDS |
| GTGCATGGATTTGTGTTTGA+AGG | 0.467396 | 6_2:+44226050 | None:intergenic |
| TATGTGAGTGTCAATTCAAA+AGG | 0.468186 | 6_2:+44234714 | None:intergenic |
| TTGATTGTTTGTTGAGATGG+TGG | 0.475794 | 6_2:+44229070 | None:intergenic |
| CATCCCCAGAAGGACCAATC+AGG | 0.479414 | 6_2:+44228669 | None:intergenic |
| CATTCAAGAAGAGTTGAAGA+TGG | 0.482867 | 6_2:-44226237 | Msa0918040:CDS |
| GGTGGTGGATCAACACCATT+AGG | 0.484583 | 6_2:+44228738 | None:intergenic |
| GTCGAGATTCACCGCCGTAT+TGG | 0.485499 | 6_2:-44233854 | Msa0918040:CDS |
| GAACCTTATGCTTATTGGAA+AGG | 0.488505 | 6_2:-44227846 | Msa0918040:CDS |
| TTCAAAGATGGAGGATCATA+AGG | 0.489687 | 6_2:+44226017 | None:intergenic |
| AGTGAATATAGTGGACCTAA+TGG | 0.489766 | 6_2:-44228753 | Msa0918040:CDS |
| CCACCACTCTTTCGTTATTG+TGG | 0.491263 | 6_2:-44228720 | Msa0918040:CDS |
| TGCAGTGGACACAACCTCAC+TGG | 0.494426 | 6_2:-44229113 | Msa0918040:CDS |
| TGATTGTTTGTTGAGATGGT+GGG | 0.496245 | 6_2:+44229071 | None:intergenic |
| TGATTACTTAATCATCGTAC+AGG | 0.496995 | 6_2:-44225859 | Msa0918040:three_prime_UTR |
| GGTGTTAATCGTCGGCGCGT+TGG | 0.501636 | 6_2:-44233821 | Msa0918040:CDS |
| ATTCTTCAATTGGGTCATTG+AGG | 0.502329 | 6_2:+44234085 | None:intergenic |
| GTGTAAATCTTGGGTTGTGA+TGG | 0.508925 | 6_2:+44234157 | None:intergenic |
| ATGGGCCAATAGTGATGCAC+TGG | 0.512841 | 6_2:+44226875 | None:intergenic |
| GTATGAATGTTGTAAACCTT+AGG | 0.512963 | 6_2:-44225892 | Msa0918040:three_prime_UTR |
| ATTAAGTTTGCTGTGGATTG+GGG | 0.512979 | 6_2:-44226827 | Msa0918040:CDS |
| GTTTCATCTATTTGATTCAG+GGG | 0.518536 | 6_2:+44229176 | None:intergenic |
| ATGAGGTTTCACAAGTAAAG+TGG | 0.522657 | 6_2:+44226928 | None:intergenic |
| GTGAAGAAATCATAGTAATG+AGG | 0.526377 | 6_2:+44226911 | None:intergenic |
| TGAACTATGTGTGGAATCAA+TGG | 0.528306 | 6_2:-44226129 | Msa0918040:CDS |
| TACACCTTGTCTCATATAGT+TGG | 0.531054 | 6_2:-44225747 | Msa0918040:three_prime_UTR |
| TAAAATGTATCATATTTGTA+CGG | 0.532529 | 6_2:-44225719 | Msa0918040:three_prime_UTR |
| TTTCCGGTGGTGTTAATCGT+CGG | 0.536539 | 6_2:-44233829 | Msa0918040:CDS |
| TATGATGGAATCATTGGTCA+AGG | 0.537960 | 6_2:-44226075 | Msa0918040:CDS |
| AGGGCAACAAAAGGATTCCA+TGG | 0.541858 | 6_2:-44227878 | Msa0918040:CDS |
| TAAGGTTCTCTCTTCATCCA+TGG | 0.544245 | 6_2:+44227861 | None:intergenic |
| TACTATGATTTCTTCACAAG+AGG | 0.544561 | 6_2:-44226905 | Msa0918040:CDS |
| AGCTGAATGAGGGCAACAAA+AGG | 0.546608 | 6_2:-44227887 | Msa0918040:CDS |
| GTTCCAAGTAGTGAATATAG+TGG | 0.549365 | 6_2:-44228762 | Msa0918040:CDS |
| CTGAAACCAACGTAAAGCCA+TGG | 0.553183 | 6_2:-44227926 | Msa0918040:CDS |
| CTTCCTTTGTTACTCCTGTG+TGG | 0.554790 | 6_2:+44228979 | None:intergenic |
| CGTGTCCTGATTACTTCCGT+TGG | 0.554988 | 6_2:-44229028 | Msa0918040:CDS |
| TAATCAAACTCGGTATCCTA+AGG | 0.556286 | 6_2:+44225876 | None:intergenic |
| CAAGTCCATTAAGTTTGCTG+TGG | 0.558180 | 6_2:-44226834 | Msa0918040:CDS |
| CACCACCGGAAACACCAATA+CGG | 0.560222 | 6_2:+44233840 | None:intergenic |
| TAAGGAGGAGGCATGGTGCA+TGG | 0.561821 | 6_2:+44226035 | None:intergenic |
| AGAAGCTCCAAACATCAAAA+GGG | 0.563747 | 6_2:-44234024 | Msa0918040:intron |
| TTTCCTGATTGGTCCTTCTG+GGG | 0.564205 | 6_2:-44228672 | Msa0918040:CDS |
| CAATAACGAAAGAGTGGTGG+TGG | 0.565164 | 6_2:+44228723 | None:intergenic |
| CGCCGTATTGGTGTTTCCGG+TGG | 0.566339 | 6_2:-44233842 | Msa0918040:CDS |
| TCAATGGTTTGTAAAGCAGA+AGG | 0.568144 | 6_2:-44226113 | Msa0918040:CDS |
| AAGATGGAAATAAGAAAAGG+AGG | 0.575412 | 6_2:+44234627 | None:intergenic |
| TTTACATTGAAGGTTCTGCT+TGG | 0.576360 | 6_2:-44226988 | Msa0918040:CDS |
| CAAAAGAACTCTATATGGAA+AGG | 0.577282 | 6_2:+44225789 | None:intergenic |
| TGAGGTTTCACAAGTAAAGT+GGG | 0.579233 | 6_2:+44226929 | None:intergenic |
| ATTTGTGCGTTCAAAGATGG+AGG | 0.579510 | 6_2:+44226008 | None:intergenic |
| AGGGAGAGAAAACTACAGAT+CGG | 0.579647 | 6_2:-44233919 | Msa0918040:five_prime_UTR |
| CAGAAACATTACATTTCATG+AGG | 0.583291 | 6_2:+44227793 | None:intergenic |
| ACTATGATTTCTTCACAAGA+GGG | 0.585395 | 6_2:-44226904 | Msa0918040:CDS |
| TGGCAGCTCAATGCACCCAT+AGG | 0.585484 | 6_2:-44227188 | Msa0918040:intron |
| GACACGTGGAAGTAGATGAA+TGG | 0.587599 | 6_2:+44229045 | None:intergenic |
| TCTATTGGGAGAGCTGAATG+AGG | 0.588888 | 6_2:-44227898 | Msa0918040:CDS |
| TTAAATCTTCATGGATCCAA+CGG | 0.591888 | 6_2:+44229012 | None:intergenic |
| CCATGAAGATTTAAGACCAT+GGG | 0.592413 | 6_2:-44229003 | Msa0918040:CDS |
| GAGATCCCATTAAATTGCAG+TGG | 0.601673 | 6_2:-44229128 | Msa0918040:CDS |
| AATCTCCCATGGCTTTACGT+TGG | 0.607546 | 6_2:+44227920 | None:intergenic |
| ATGATGGAATCATTGGTCAA+GGG | 0.609119 | 6_2:-44226074 | Msa0918040:CDS |
| GATGGAGGATCATAAGGAGG+AGG | 0.609393 | 6_2:+44226023 | None:intergenic |
| GTTGTGATGGTGTAAAATGA+TGG | 0.609732 | 6_2:+44234170 | None:intergenic |
| TTGTGGTAATGATGCAACAT+TGG | 0.611983 | 6_2:-44228703 | Msa0918040:CDS |
| CAAAGCTGTTGAACTATGTG+TGG | 0.615663 | 6_2:-44226138 | Msa0918040:CDS |
| TGAAACCAACGTAAAGCCAT+GGG | 0.619025 | 6_2:-44227925 | Msa0918040:CDS |
| CTATTGGGAGAGCTGAATGA+GGG | 0.624757 | 6_2:-44227897 | Msa0918040:CDS |
| TCCATGAAGATTTAAGACCA+TGG | 0.625755 | 6_2:-44229004 | Msa0918040:CDS |
| AGGGTACAAGAAATCTGACT+TGG | 0.630577 | 6_2:-44227208 | Msa0918040:CDS |
| GCACAAATAAGAAGAAAGCA+AGG | 0.634326 | 6_2:-44225993 | Msa0918040:CDS |
| TCTCCCAATAGAATCTCCCA+TGG | 0.636355 | 6_2:+44227909 | None:intergenic |
| AAAGATGGAGGATCATAAGG+AGG | 0.643171 | 6_2:+44226020 | None:intergenic |
| GATGACTTACCATCCCCAGA+AGG | 0.648759 | 6_2:+44228659 | None:intergenic |
| TGGGGACGAGAGTCACAACA+AGG | 0.651153 | 6_2:-44227228 | Msa0918040:CDS |
| GCGCCGACGATTAACACCAC+CGG | 0.651364 | 6_2:+44233826 | None:intergenic |
| CAAGACAAGAGAAAATTCCC+AGG | 0.653139 | 6_2:-44234499 | Msa0918040:intron |
| AGGATCATAAGGAGGAGGCA+TGG | 0.658063 | 6_2:+44226028 | None:intergenic |
| GGCCCACACAGGAGTAACAA+AGG | 0.658392 | 6_2:-44228982 | Msa0918040:CDS |
| GGGCAATAGTCACAAAACAA+AGG | 0.663293 | 6_2:-44226807 | Msa0918040:intron |
| GGAGAGAAAACTACAGATCG+GGG | 0.664854 | 6_2:-44233917 | Msa0918040:five_prime_UTR |
| TTACCACAATAACGAAAGAG+TGG | 0.665538 | 6_2:+44228717 | None:intergenic |
| TCGGCGCGTTGGTGTACGCG+CGG | 0.667727 | 6_2:-44233810 | Msa0918040:CDS |
| TTAGCCAACTATATGAGACA+AGG | 0.681453 | 6_2:+44225743 | None:intergenic |
| CAGTTGTTAAGGAAGTACCC+TGG | 0.684929 | 6_2:-44228834 | Msa0918040:CDS |
| GATGATTAAGTAATCAAACT+CGG | 0.689186 | 6_2:+44225866 | None:intergenic |
| TTAAGACCATGGGCCCACAC+AGG | 0.695820 | 6_2:-44228993 | Msa0918040:CDS |
| TGGTTCATTAGATGAAACTG+CGG | 0.701279 | 6_2:+44229238 | None:intergenic |
| CCACAATAACGAAAGAGTGG+TGG | 0.701858 | 6_2:+44228720 | None:intergenic |
| CACCGGAAACACCAATACGG+CGG | 0.721379 | 6_2:+44233843 | None:intergenic |
| ACGGAAGTAATCAGGACACG+TGG | 0.722938 | 6_2:+44229031 | None:intergenic |
| GGGGACGAGAGTCACAACAA+GGG | 0.759436 | 6_2:-44227227 | Msa0918040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTAAAAAATATTTTGTTT+TGG | + | chr6_2:44226951-44226970 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATAATACAAAG+AGG | - | chr6_2:44227825-44227844 | Msa0918040:CDS | 10.0% |
| !!! | ATTCATTTAAAATTTTACAA+TGG | - | chr6_2:44228730-44228749 | Msa0918040:CDS | 10.0% |
| !!! | TTCATTTAAAATTTTACAAT+GGG | - | chr6_2:44228731-44228750 | Msa0918040:CDS | 10.0% |
| !! | TAAATTATTATATAATGCTT+AGG | - | chr6_2:44229000-44229019 | Msa0918040:CDS | 10.0% |
| !!! | AATTTTTAATTTTCTAAGTT+TGG | + | chr6_2:44229363-44229382 | None:intergenic | 10.0% |
| !!! | ACTTTTTTTTTTAAAAAACT+CGG | + | chr6_2:44230100-44230119 | None:intergenic | 10.0% |
| !!! | TTATATTAATAACTCTTTTT+AGG | - | chr6_2:44230137-44230156 | Msa0918040:intron | 10.0% |
| !!! | TATATTAATAACTCTTTTTA+GGG | - | chr6_2:44230138-44230157 | Msa0918040:intron | 10.0% |
| !!! | ATATTAATAACTTTTTTTAG+GGG | - | chr6_2:44230166-44230185 | Msa0918040:intron | 10.0% |
| !!! | TGGTTTTTTTTTTTTTTTTA+AGG | - | chr6_2:44230506-44230525 | Msa0918040:intron | 10.0% |
| !!! | AAATTTTTTTGTTTTGTTTT+TGG | + | chr6_2:44233038-44233057 | None:intergenic | 10.0% |
| !! | AGTATTATACAAAAATAAAA+GGG | + | chr6_2:44233134-44233153 | None:intergenic | 10.0% |
| !! | AAGTATTATACAAAAATAAA+AGG | + | chr6_2:44233135-44233154 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTCAAAGTTATT+TGG | - | chr6_2:44233153-44233172 | Msa0918040:intron | 10.0% |
| !!! | CAAAATTTTCATTTTTAATT+TGG | + | chr6_2:44233207-44233226 | None:intergenic | 10.0% |
| !! | AATTTAAAAGAATGAATTAA+TGG | + | chr6_2:44234010-44234029 | None:intergenic | 10.0% |
| !! | ATTAGAAAAAAAATTTATGA+TGG | - | chr6_2:44234374-44234393 | Msa0918040:intron | 10.0% |
| !!! | TTTTAAGATAAATTTAACAT+GGG | - | chr6_2:44234837-44234856 | Msa0918040:five_prime_UTR | 10.0% |
| !! | AATGATTAATATTGCTTATA+TGG | + | chr6_2:44225640-44225659 | None:intergenic | 15.0% |
| !!! | CTTTTTCTCTTTTTTTTTTT+TGG | - | chr6_2:44225797-44225816 | Msa0918040:three_prime_UTR | 15.0% |
| !!! | GACTTTTTTATTTAACAAAA+AGG | + | chr6_2:44225873-44225892 | None:intergenic | 15.0% |
| !! | ACAAAAGAAAAAAGAAAATT+GGG | + | chr6_2:44226267-44226286 | None:intergenic | 15.0% |
| !! | AACAAAAGAAAAAAGAAAAT+TGG | + | chr6_2:44226268-44226287 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAATACTCAC+AGG | + | chr6_2:44226692-44226711 | None:intergenic | 15.0% |
| !!! | AAAAAATAAAGTTACTTTAG+AGG | + | chr6_2:44226869-44226888 | None:intergenic | 15.0% |
| !! | ATTGTTTAAGAACTATTAAT+GGG | - | chr6_2:44227166-44227185 | Msa0918040:intron | 15.0% |
| !! | TTATTCCTAAATAATATGTT+GGG | + | chr6_2:44227365-44227384 | None:intergenic | 15.0% |
| !! | TTTATTCCTAAATAATATGT+TGG | + | chr6_2:44227366-44227385 | None:intergenic | 15.0% |
| !!! | CAATTTTAGGTAAATTAATT+GGG | + | chr6_2:44227390-44227409 | None:intergenic | 15.0% |
| !!! | TCAATTTTAGGTAAATTAAT+TGG | + | chr6_2:44227391-44227410 | None:intergenic | 15.0% |
| !! | AATTAATTTACCTAAAATTG+AGG | - | chr6_2:44227390-44227409 | Msa0918040:intron | 15.0% |
| !!! | GACTATATATAATATTTTGA+AGG | - | chr6_2:44227793-44227812 | Msa0918040:intron | 15.0% |
| !! | TTAAGTTTATATTCTCTTAA+TGG | - | chr6_2:44229793-44229812 | Msa0918040:intron | 15.0% |
| !! | GAGTTATTAATATAATGAAT+GGG | + | chr6_2:44230132-44230151 | None:intergenic | 15.0% |
| !! | AGAGTTATTAATATAATGAA+TGG | + | chr6_2:44230133-44230152 | None:intergenic | 15.0% |
| !!! | ATATTAATAACTCTTTTTAG+GGG | - | chr6_2:44230139-44230158 | Msa0918040:intron | 15.0% |
| !!! | TATTAATAACTTTTTTTAGG+GGG | - | chr6_2:44230167-44230186 | Msa0918040:intron | 15.0% |
| !!! | TGAAATATTATGTCTAAAAT+AGG | + | chr6_2:44230385-44230404 | None:intergenic | 15.0% |
| !!! | ATATAAACAAGTTTAGTTTT+GGG | - | chr6_2:44232329-44232348 | Msa0918040:intron | 15.0% |
| !! | AATTTAGATTCAAAAGTAAT+TGG | + | chr6_2:44232408-44232427 | None:intergenic | 15.0% |
| !!! | CAAAATTTGTTATATTGTTA+GGG | + | chr6_2:44232806-44232825 | None:intergenic | 15.0% |
| !!! | TCAAAATTTGTTATATTGTT+AGG | + | chr6_2:44232807-44232826 | None:intergenic | 15.0% |
| !! | AAAACAAAAAAAAATTTGTG+AGG | + | chr6_2:44232864-44232883 | None:intergenic | 15.0% |
| !! | AAACAAAACAAAAAAATTTG+AGG | - | chr6_2:44233039-44233058 | Msa0918040:intron | 15.0% |
| !!! | TTTTAATCCATAAAAAAATG+AGG | + | chr6_2:44233071-44233090 | None:intergenic | 15.0% |
| !! | GTATTATACAAAAATAAAAG+GGG | + | chr6_2:44233133-44233152 | None:intergenic | 15.0% |
| !!! | AAAAATGAAAATTTTGTTTC+AGG | - | chr6_2:44233211-44233230 | Msa0918040:intron | 15.0% |
| !!! | TCTTTTAAATTTTATCGATT+TGG | - | chr6_2:44234019-44234038 | Msa0918040:intron | 15.0% |
| !! | TAAAATGTATCATATTTGTA+CGG | - | chr6_2:44234745-44234764 | Msa0918040:five_prime_UTR | 15.0% |
| !!! | GTTTTAAGATAAATTTAACA+TGG | - | chr6_2:44234836-44234855 | Msa0918040:five_prime_UTR | 15.0% |
| !! | AGAGAAAAAGATCATTTAAT+AGG | + | chr6_2:44225787-44225806 | None:intergenic | 20.0% |
| !! | AAAAAGATGGAAATAAGAAA+AGG | + | chr6_2:44225843-44225862 | None:intergenic | 20.0% |
| !! | AAAAGGACTAATAAAAAAGA+TGG | + | chr6_2:44225856-44225875 | None:intergenic | 20.0% |
| !!! | AATAAGTGTAACTTTTTTAC+AGG | + | chr6_2:44225901-44225920 | None:intergenic | 20.0% |
| !!! | TTTGAAATGATTCTTCAATT+GGG | + | chr6_2:44226391-44226410 | None:intergenic | 20.0% |
| !!! | TTAACGTTAGTTATTTGTTT+TGG | - | chr6_2:44226763-44226782 | Msa0918040:intron | 20.0% |
| !! | CATTGTTTAAGAACTATTAA+TGG | - | chr6_2:44227165-44227184 | Msa0918040:intron | 20.0% |
| !!! | CATTCAATTATTTAGTCTTT+CGG | + | chr6_2:44227212-44227231 | None:intergenic | 20.0% |
| !! | TTTATCCCAACATATTATTT+AGG | - | chr6_2:44227357-44227376 | Msa0918040:intron | 20.0% |
| !!! | ATCTTTTAAACCTCAATTTT+AGG | + | chr6_2:44227403-44227422 | None:intergenic | 20.0% |
| !! | AATAAGTGTTAGTATTATGT+TGG | + | chr6_2:44227645-44227664 | None:intergenic | 20.0% |
| !! | ATTGACAATTCAACAAAAAT+CGG | + | chr6_2:44228034-44228053 | None:intergenic | 20.0% |
| !! | ATAAAACAATGAATTCCTAT+TGG | + | chr6_2:44228069-44228088 | None:intergenic | 20.0% |
| !!! | AGTTTTTGCTTTGAATAATA+AGG | - | chr6_2:44228275-44228294 | Msa0918040:intron | 20.0% |
| !!! | GTTTTTGCTTTGAATAATAA+GGG | - | chr6_2:44228276-44228295 | Msa0918040:intron | 20.0% |
| !! | TTGAATAATAAGGGTAAATA+TGG | - | chr6_2:44228285-44228304 | Msa0918040:intron | 20.0% |
| !!! | TTGACAAAAAAAGTTTTGTT+TGG | + | chr6_2:44228434-44228453 | None:intergenic | 20.0% |
| !! | TATCATCCAATTTAATGATA+TGG | + | chr6_2:44228624-44228643 | None:intergenic | 20.0% |
| !! | AATAATTTATACCATCCAAT+AGG | + | chr6_2:44228655-44228674 | None:intergenic | 20.0% |
| !! | ACAAACATATGGTTATTATT+TGG | + | chr6_2:44228900-44228919 | None:intergenic | 20.0% |
| !!! | TAATTCTCCTTTAATTTATG+AGG | + | chr6_2:44229146-44229165 | None:intergenic | 20.0% |
| !!! | TTTAATTTTCTAAGTTTGGT+TGG | + | chr6_2:44229359-44229378 | None:intergenic | 20.0% |
| !!! | GTGACTTTAATATATTTTAG+AGG | - | chr6_2:44229554-44229573 | Msa0918040:intron | 20.0% |
| !!! | AGATAAACTAATTGTTTCTT+TGG | - | chr6_2:44229877-44229896 | Msa0918040:intron | 20.0% |
| !!! | ATGTAGAGTTTATTTTTAGA+GGG | + | chr6_2:44230453-44230472 | None:intergenic | 20.0% |
| !!! | AATGTAGAGTTTATTTTTAG+AGG | + | chr6_2:44230454-44230473 | None:intergenic | 20.0% |
| !! | AAATCCTAAATATGAAAGTA+GGG | - | chr6_2:44230666-44230685 | Msa0918040:intron | 20.0% |
| !!! | TTCAAGTTAGTGATATTAAA+AGG | - | chr6_2:44231537-44231556 | Msa0918040:intron | 20.0% |
| !! | ATCTCTAAATTAAAGTTTGT+AGG | - | chr6_2:44232213-44232232 | Msa0918040:intron | 20.0% |
| !!! | CATATAAACAAGTTTAGTTT+TGG | - | chr6_2:44232328-44232347 | Msa0918040:intron | 20.0% |
| !!! | AAGCAAACATTATAGTTTTA+TGG | - | chr6_2:44232484-44232503 | Msa0918040:intron | 20.0% |
| !!! | CTCCTAATCTAATTTTATTT+CGG | - | chr6_2:44232763-44232782 | Msa0918040:intron | 20.0% |
| !! | AACCGAAATAAAATTAGATT+AGG | + | chr6_2:44232768-44232787 | None:intergenic | 20.0% |
| !! | ACATTCATGTTAACATAAAT+TGG | + | chr6_2:44232900-44232919 | None:intergenic | 20.0% |
| !! | TAGAGTTAATGTTGAATTTA+AGG | + | chr6_2:44233307-44233326 | None:intergenic | 20.0% |
| !! | TAAATTCAACATTAACTCTA+TGG | - | chr6_2:44233307-44233326 | Msa0918040:intron | 20.0% |
| !!! | TAACTTCAATTTTCAAACAT+AGG | + | chr6_2:44233348-44233367 | None:intergenic | 20.0% |
| !! | ATATATTGTGTGTAGATATA+AGG | - | chr6_2:44233453-44233472 | Msa0918040:intron | 20.0% |
| !! | TAATTAATCATATTCTTTGC+TGG | - | chr6_2:44233712-44233731 | Msa0918040:intron | 20.0% |
| !! | CATGTTATTAACTAAGTATT+GGG | + | chr6_2:44233910-44233929 | None:intergenic | 20.0% |
| !! | TCATGTTATTAACTAAGTAT+TGG | + | chr6_2:44233911-44233930 | None:intergenic | 20.0% |
| !!! | AAAATTTATGATGGAATCAT+TGG | - | chr6_2:44234383-44234402 | Msa0918040:intron | 20.0% |
| ! | TCATTCAAATAATTCATTGC+AGG | - | chr6_2:44225655-44225674 | Msa0918040:three_prime_UTR | 25.0% |
| ! | AGAGAAAAATAAATGAACCT+GGG | + | chr6_2:44225985-44226004 | None:intergenic | 25.0% |
| ! | TAGTGTCTAAATAGCAAATT+TGG | + | chr6_2:44226051-44226070 | None:intergenic | 25.0% |
| !!! | CTTTGAAATGATTCTTCAAT+TGG | + | chr6_2:44226392-44226411 | None:intergenic | 25.0% |
| !! | ATTTCAAAGTTTGCATCTTT+TGG | - | chr6_2:44226403-44226422 | Msa0918040:intron | 25.0% |
| !! | AATCAAATCAATGTTGTTTG+AGG | + | chr6_2:44226721-44226740 | None:intergenic | 25.0% |
| !!! | TCAAACAACATTGATTTGAT+TGG | - | chr6_2:44226720-44226739 | Msa0918040:intron | 25.0% |
| !!! | GTTATTTGTTTTGGATGTTT+CGG | - | chr6_2:44226772-44226791 | Msa0918040:intron | 25.0% |
| ! | AAACAGTAACATATACATAG+GGG | + | chr6_2:44226842-44226861 | None:intergenic | 25.0% |
| ! | CAAACAGTAACATATACATA+GGG | + | chr6_2:44226843-44226862 | None:intergenic | 25.0% |
| ! | ACAAACAGTAACATATACAT+AGG | + | chr6_2:44226844-44226863 | None:intergenic | 25.0% |
| !! | CTAAAGTAACTTTCTCATTT+TGG | - | chr6_2:44226903-44226922 | Msa0918040:CDS | 25.0% |
| !!! | TTTGATTTTCCATTCAACAA+AGG | + | chr6_2:44227455-44227474 | None:intergenic | 25.0% |
| ! | AACAAACATATATATAGCCT+AGG | - | chr6_2:44227545-44227564 | Msa0918040:intron | 25.0% |
| ! | TTGACAATTCAACAAAAATC+GGG | + | chr6_2:44228033-44228052 | None:intergenic | 25.0% |
| ! | TACCTTACTTGATATGATTT+AGG | - | chr6_2:44228121-44228140 | Msa0918040:intron | 25.0% |
| ! | AACATTAATCATCAAAGCAT+AGG | - | chr6_2:44228587-44228606 | Msa0918040:intron | 25.0% |
| ! | CCAATTTAATGATATGGATA+TGG | + | chr6_2:44228618-44228637 | None:intergenic | 25.0% |
| ! | CCATATCCATATCATTAAAT+TGG | - | chr6_2:44228615-44228634 | Msa0918040:intron | 25.0% |
| ! | GATGATATAAATGAACCTAT+TGG | - | chr6_2:44228637-44228656 | Msa0918040:intron | 25.0% |
| ! | ATATAAATGAACCTATTGGA+TGG | - | chr6_2:44228641-44228660 | Msa0918040:intron | 25.0% |
| ! | CACAAATAACATATACATGT+TGG | + | chr6_2:44228788-44228807 | None:intergenic | 25.0% |
| ! | AATAACCATATGTTTGTAAG+AGG | - | chr6_2:44228903-44228922 | Msa0918040:CDS | 25.0% |
| ! | ATAACCATATGTTTGTAAGA+GGG | - | chr6_2:44228904-44228923 | Msa0918040:CDS | 25.0% |
| ! | TTATGTGCCTCATAAATTAA+AGG | - | chr6_2:44229136-44229155 | Msa0918040:CDS | 25.0% |
| !!! | AGATTAATACTTGTTGTAAG+TGG | - | chr6_2:44229179-44229198 | Msa0918040:CDS | 25.0% |
| !! | AAATTTTGCTTCATTGATGA+AGG | - | chr6_2:44229213-44229232 | Msa0918040:CDS | 25.0% |
| !! | AATTTTGCTTCATTGATGAA+GGG | - | chr6_2:44229214-44229233 | Msa0918040:CDS | 25.0% |
| !! | TTTGCTACTAGATATTTCTA+AGG | - | chr6_2:44229318-44229337 | Msa0918040:intron | 25.0% |
| ! | CAAAATTACAATGTTAACGT+GGG | + | chr6_2:44229485-44229504 | None:intergenic | 25.0% |
| !! | TTTTGATGAGAGAGAATTAT+TGG | - | chr6_2:44229612-44229631 | Msa0918040:intron | 25.0% |
| !! | TCTCTTAATGGTAATTTTAG+TGG | - | chr6_2:44229805-44229824 | Msa0918040:intron | 25.0% |
| !!! | CTCTTAATGGTAATTTTAGT+GGG | - | chr6_2:44229806-44229825 | Msa0918040:intron | 25.0% |
| !! | AAACTAATTGTTTCTTTGGT+TGG | - | chr6_2:44229881-44229900 | Msa0918040:intron | 25.0% |
| ! | TTTCGTATATTCACAACTAT+TGG | - | chr6_2:44230215-44230234 | Msa0918040:intron | 25.0% |
| !!! | AATCCCACAGTTTTTTTTAA+GGG | + | chr6_2:44230247-44230266 | None:intergenic | 25.0% |
| !!! | TAATCCCACAGTTTTTTTTA+AGG | + | chr6_2:44230248-44230267 | None:intergenic | 25.0% |
| !!! | GTTTGTTTTACTGTTTTTTC+TGG | - | chr6_2:44230486-44230505 | Msa0918040:intron | 25.0% |
| ! | CTTAAACGTTCTTTCAAAAA+AGG | + | chr6_2:44230555-44230574 | None:intergenic | 25.0% |
| ! | CAAATCCTAAATATGAAAGT+AGG | - | chr6_2:44230665-44230684 | Msa0918040:intron | 25.0% |
| !! | ACTAACAAACGATTCTTTTT+GGG | + | chr6_2:44230870-44230889 | None:intergenic | 25.0% |
| !! | TACTAACAAACGATTCTTTT+TGG | + | chr6_2:44230871-44230890 | None:intergenic | 25.0% |
| !! | CTCATTTAGTGAATAAGTTT+TGG | - | chr6_2:44231067-44231086 | Msa0918040:intron | 25.0% |
| ! | TGTTTCATCTATTTGATTCA+GGG | + | chr6_2:44231292-44231311 | None:intergenic | 25.0% |
| ! | ATGAAACACCAAAAAAAAAC+CGG | - | chr6_2:44231304-44231323 | Msa0918040:intron | 25.0% |
| !!! | ATTTGATTCCGGTTTTTTTT+TGG | + | chr6_2:44231315-44231334 | None:intergenic | 25.0% |
| !! | AAGAGATACTTTTACTCTAT+GGG | - | chr6_2:44231599-44231618 | Msa0918040:intron | 25.0% |
| !! | TTATGTTTGATTGTGTTGAT+TGG | - | chr6_2:44231673-44231692 | Msa0918040:intron | 25.0% |
| !!! | TTTTGTATCCGATTTGTTTA+AGG | - | chr6_2:44231846-44231865 | Msa0918040:intron | 25.0% |
| ! | CGACTATTAAATCAAGTTAT+AGG | + | chr6_2:44231907-44231926 | None:intergenic | 25.0% |
| ! | ATTTAATAGTCGAGATTTGA+TGG | - | chr6_2:44231915-44231934 | Msa0918040:intron | 25.0% |
| ! | TTTGGAAGATGTCAATTATA+CGG | - | chr6_2:44231964-44231983 | Msa0918040:intron | 25.0% |
| ! | ATAGTAGTTTCAAAATGTCA+TGG | - | chr6_2:44232017-44232036 | Msa0918040:intron | 25.0% |
| ! | AAAACTACTTATCCTATGTT+TGG | + | chr6_2:44232086-44232105 | None:intergenic | 25.0% |
| !!! | GTAGGTTTTAATGTATGATT+AGG | - | chr6_2:44232231-44232250 | Msa0918040:intron | 25.0% |
| !! | TAAGCTTTTCTAAATCAATG+AGG | - | chr6_2:44232360-44232379 | Msa0918040:intron | 25.0% |
| ! | AAGAACAATCAATCTCTATT+TGG | + | chr6_2:44232444-44232463 | None:intergenic | 25.0% |
| !! | TGTGCTTTAATTGATGATAT+AGG | - | chr6_2:44232514-44232533 | Msa0918040:intron | 25.0% |
| !! | ATGTTTCTGAAAAACAAGAA+TGG | - | chr6_2:44232685-44232704 | Msa0918040:intron | 25.0% |
| ! | AAATTAGATTAGGAGAGATA+AGG | + | chr6_2:44232758-44232777 | None:intergenic | 25.0% |
| ! | TTAACATAAATTGGCCATTA+GGG | + | chr6_2:44232891-44232910 | None:intergenic | 25.0% |
| ! | CGTCAAAATTATATTCGTTA+AGG | - | chr6_2:44233011-44233030 | Msa0918040:intron | 25.0% |
| !!! | GATGAAACCTCATTTTTTTA+TGG | - | chr6_2:44233061-44233080 | Msa0918040:intron | 25.0% |
| !!! | TGAAAATTTTGTTTCAGGAT+TGG | - | chr6_2:44233216-44233235 | Msa0918040:intron | 25.0% |
| !!! | GAAAATTTTGTTTCAGGATT+GGG | - | chr6_2:44233217-44233236 | Msa0918040:intron | 25.0% |
| !!! | AAAATTTTGTTTCAGGATTG+GGG | - | chr6_2:44233218-44233237 | Msa0918040:intron | 25.0% |
| ! | AGATATAAGGTTTACATTGA+AGG | - | chr6_2:44233466-44233485 | Msa0918040:intron | 25.0% |
| !! | TAGAATGTATTTTTCACTCA+CGG | + | chr6_2:44233503-44233522 | None:intergenic | 25.0% |
| ! | CAATAAGATCATCTTGAATA+GGG | + | chr6_2:44233884-44233903 | None:intergenic | 25.0% |
| ! | ACAATAAGATCATCTTGAAT+AGG | + | chr6_2:44233885-44233904 | None:intergenic | 25.0% |
| ! | TAAGCTCTGTACAATTATAA+TGG | - | chr6_2:44233937-44233956 | Msa0918040:intron | 25.0% |
| !! | AGAGTTTTGCATATGAATTT+AGG | + | chr6_2:44234281-44234300 | None:intergenic | 25.0% |
| ! | GATGATTAAGTAATCAAACT+CGG | + | chr6_2:44234601-44234620 | None:intergenic | 25.0% |
| !! | TTTCCATATAGAGTTCTTTT+GGG | - | chr6_2:44234677-44234696 | Msa0918040:five_prime_UTR | 25.0% |
| GTCAATTCAAAAGGAAGATT+GGG | + | chr6_2:44225744-44225763 | None:intergenic | 30.0% | |
| TGTCAATTCAAAAGGAAGAT+TGG | + | chr6_2:44225745-44225764 | None:intergenic | 30.0% | |
| TATGTGAGTGTCAATTCAAA+AGG | + | chr6_2:44225753-44225772 | None:intergenic | 30.0% | |
| AAGATGGAAATAAGAAAAGG+AGG | + | chr6_2:44225840-44225859 | None:intergenic | 30.0% | |
| !!! | TGTAACTTTTTTACAGGTTG+AGG | + | chr6_2:44225895-44225914 | None:intergenic | 30.0% |
| CAGAGAAAAATAAATGAACC+TGG | + | chr6_2:44225986-44226005 | None:intergenic | 30.0% | |
| GTTGAGAAAAGATGTTAGAT+GGG | + | chr6_2:44226245-44226264 | None:intergenic | 30.0% | |
| TCTATTGTGACTTTGTTCTT+GGG | + | chr6_2:44226341-44226360 | None:intergenic | 30.0% | |
| ! | ATACATACCCTTTTGATGTT+TGG | + | chr6_2:44226450-44226469 | None:intergenic | 30.0% |
| AAAAAGACATGAGAATTGCT+TGG | - | chr6_2:44226799-44226818 | Msa0918040:intron | 30.0% | |
| AACAGTAACATATACATAGG+GGG | + | chr6_2:44226841-44226860 | None:intergenic | 30.0% | |
| ! | AAGTAACTTTCTCATTTTGG+TGG | - | chr6_2:44226906-44226925 | Msa0918040:CDS | 30.0% |
| !! | CATACTCATTGTTGTTTCTT+TGG | + | chr6_2:44227037-44227056 | None:intergenic | 30.0% |
| ! | TATTTAGTCTTTCGGTTATG+TGG | + | chr6_2:44227204-44227223 | None:intergenic | 30.0% |
| AGTTAAGTAGTTGAATGACA+AGG | - | chr6_2:44227597-44227616 | Msa0918040:intron | 30.0% | |
| AGTGTTAGTATTATGTTGGA+TGG | + | chr6_2:44227641-44227660 | None:intergenic | 30.0% | |
| ! | AAAAGTCAACAATGTCCTTT+TGG | - | chr6_2:44227936-44227955 | Msa0918040:intron | 30.0% |
| ! | TCAACAAAAATCGGGTTTTT+AGG | + | chr6_2:44228025-44228044 | None:intergenic | 30.0% |
| AATATATTCAGCTCTCCAAT+AGG | - | chr6_2:44228051-44228070 | Msa0918040:intron | 30.0% | |
| AGCCTAAATCATATCAAGTA+AGG | + | chr6_2:44228126-44228145 | None:intergenic | 30.0% | |
| !!! | GGTAACATTTTAACTCTGTT+TGG | + | chr6_2:44228413-44228432 | None:intergenic | 30.0% |
| !!! | AGAGCTAAAAGCTCTTTTTT+TGG | - | chr6_2:44228477-44228496 | Msa0918040:intron | 30.0% |
| !!! | GAGCTAAAAGCTCTTTTTTT+GGG | - | chr6_2:44228478-44228497 | Msa0918040:intron | 30.0% |
| TTCAAATCTTATAGGATGGA+CGG | + | chr6_2:44228534-44228553 | None:intergenic | 30.0% | |
| ! | ATGGTTGCTTTATTGAGAAA+CGG | - | chr6_2:44228846-44228865 | Msa0918040:CDS | 30.0% |
| ! | TTACATATAGGCGTTATTTC+TGG | + | chr6_2:44229098-44229117 | None:intergenic | 30.0% |
| AGAAATAACGCCTATATGTA+AGG | - | chr6_2:44229097-44229116 | Msa0918040:CDS | 30.0% | |
| ! | ATTTTGCTTCATTGATGAAG+GGG | - | chr6_2:44229215-44229234 | Msa0918040:CDS | 30.0% |
| GCAAAATTACAATGTTAACG+TGG | + | chr6_2:44229486-44229505 | None:intergenic | 30.0% | |
| ! | ATGAGAGAGAATTATTGGTT+AGG | - | chr6_2:44229617-44229636 | Msa0918040:intron | 30.0% |
| !! | TTTGAGTTGATTTCTCGTAA+TGG | - | chr6_2:44229757-44229776 | Msa0918040:intron | 30.0% |
| ! | TCTCGTAATGGTAATTTTAG+TGG | - | chr6_2:44229769-44229788 | Msa0918040:intron | 30.0% |
| !! | CTCGTAATGGTAATTTTAGT+GGG | - | chr6_2:44229770-44229789 | Msa0918040:intron | 30.0% |
| TGGGTTAAATGACTTTAAGT+GGG | - | chr6_2:44229825-44229844 | Msa0918040:intron | 30.0% | |
| ! | TTTAAGTGGGATTTTGTGAA+TGG | - | chr6_2:44229838-44229857 | Msa0918040:intron | 30.0% |
| ! | AAAATTTCAAGTCAACCACT+GGG | + | chr6_2:44229996-44230015 | None:intergenic | 30.0% |
| TAAGCCCTTAAAAAAAACTG+TGG | - | chr6_2:44230240-44230259 | Msa0918040:intron | 30.0% | |
| AAGCCCTTAAAAAAAACTGT+GGG | - | chr6_2:44230241-44230260 | Msa0918040:intron | 30.0% | |
| GCCAAAATAATGTAGAGTAA+CGG | - | chr6_2:44230596-44230615 | Msa0918040:intron | 30.0% | |
| ! | CACGCCACTTTAATTAAATT+GGG | - | chr6_2:44230620-44230639 | Msa0918040:intron | 30.0% |
| ! | ACGCCACTTTAATTAAATTG+GGG | - | chr6_2:44230621-44230640 | Msa0918040:intron | 30.0% |
| TCTCCCCAATTTAATTAAAG+TGG | + | chr6_2:44230627-44230646 | None:intergenic | 30.0% | |
| ATGACCCTACTTTCATATTT+AGG | + | chr6_2:44230673-44230692 | None:intergenic | 30.0% | |
| AGACAAATGAGTGTATGAAA+GGG | + | chr6_2:44230726-44230745 | None:intergenic | 30.0% | |
| AAGACAAATGAGTGTATGAA+AGG | + | chr6_2:44230727-44230746 | None:intergenic | 30.0% | |
| TGTCTTTATCATACAAACAC+AGG | - | chr6_2:44230741-44230760 | Msa0918040:intron | 30.0% | |
| GTCTTTATCATACAAACACA+GGG | - | chr6_2:44230742-44230761 | Msa0918040:intron | 30.0% | |
| ACATAATAGTAAACGTTCGA+TGG | + | chr6_2:44230789-44230808 | None:intergenic | 30.0% | |
| TTTGTAATAGTCTCTCATGT+AGG | + | chr6_2:44230969-44230988 | None:intergenic | 30.0% | |
| ACTTATTCACTAAATGAGAC+CGG | + | chr6_2:44231065-44231084 | None:intergenic | 30.0% | |
| !! | TATGCTTTGTTTGTTAGGAT+TGG | + | chr6_2:44231249-44231268 | None:intergenic | 30.0% |
| !! | CATCATATGCTTTGTTTGTT+AGG | + | chr6_2:44231254-44231273 | None:intergenic | 30.0% |
| GTTTCATCTATTTGATTCAG+GGG | + | chr6_2:44231291-44231310 | None:intergenic | 30.0% | |
| GTGTTTCATCTATTTGATTC+AGG | + | chr6_2:44231293-44231312 | None:intergenic | 30.0% | |
| TTAAATCTTCATGGATCCAA+CGG | + | chr6_2:44231455-44231474 | None:intergenic | 30.0% | |
| ! | CAAGAGATACTTTTACTCTA+TGG | - | chr6_2:44231598-44231617 | Msa0918040:intron | 30.0% |
| ! | AGAGATACTTTTACTCTATG+GGG | - | chr6_2:44231600-44231619 | Msa0918040:intron | 30.0% |
| !! | TGGATATTGTTTTTCCTGAT+TGG | - | chr6_2:44231781-44231800 | Msa0918040:intron | 30.0% |
| AAAGAATCTTAGCATGTGTT+TGG | - | chr6_2:44231946-44231965 | Msa0918040:intron | 30.0% | |
| TCAAATGCTAAACCAAACAT+AGG | - | chr6_2:44232071-44232090 | Msa0918040:intron | 30.0% | |
| !!! | TAAACAAGTTTAGTTTTGGG+AGG | - | chr6_2:44232332-44232351 | Msa0918040:intron | 30.0% |
| AACCTTATGCTTATTGGAAA+GGG | - | chr6_2:44232619-44232638 | Msa0918040:intron | 30.0% | |
| CAGAAACATTACATTTCATG+AGG | + | chr6_2:44232674-44232693 | None:intergenic | 30.0% | |
| GGAGAGATAAGGTTTATATA+AGG | + | chr6_2:44232747-44232766 | None:intergenic | 30.0% | |
| !!! | TTTTTGTTTTTCCTCCCTAA+TGG | - | chr6_2:44232874-44232893 | Msa0918040:intron | 30.0% |
| GTTAACATAAATTGGCCATT+AGG | + | chr6_2:44232892-44232911 | None:intergenic | 30.0% | |
| GAATTTAAGGACATACCTAT+GGG | + | chr6_2:44233294-44233313 | None:intergenic | 30.0% | |
| TGAATTTAAGGACATACCTA+TGG | + | chr6_2:44233295-44233314 | None:intergenic | 30.0% | |
| GTGAAGAAATCATAGTAATG+AGG | + | chr6_2:44233556-44233575 | None:intergenic | 30.0% | |
| TACTATGATTTCTTCACAAG+AGG | - | chr6_2:44233559-44233578 | Msa0918040:intron | 30.0% | |
| ACTATGATTTCTTCACAAGA+GGG | - | chr6_2:44233560-44233579 | Msa0918040:intron | 30.0% | |
| CACTTATCATCTTCCTTAAT+GGG | + | chr6_2:44233610-44233629 | None:intergenic | 30.0% | |
| ! | TTATCACCTTAGAGTCTTTT+TGG | - | chr6_2:44234083-44234102 | Msa0918040:five_prime_UTR | 30.0% |
| ! | AATTCAACGAGTCGAATTTT+GGG | - | chr6_2:44234497-44234516 | Msa0918040:intron | 30.0% |
| !! | AATTTTGGGAGACAAGTTAT+TGG | - | chr6_2:44234511-44234530 | Msa0918040:five_prime_UTR | 30.0% |
| GTATGAATGTTGTAAACCTT+AGG | - | chr6_2:44234572-44234591 | Msa0918040:five_prime_UTR | 30.0% | |
| TGATTACTTAATCATCGTAC+AGG | - | chr6_2:44234605-44234624 | Msa0918040:five_prime_UTR | 30.0% | |
| TCGTACAGGAAAAAAAAAAG+AGG | - | chr6_2:44234619-44234638 | Msa0918040:five_prime_UTR | 30.0% | |
| CAAAAGAACTCTATATGGAA+AGG | + | chr6_2:44234678-44234697 | None:intergenic | 30.0% | |
| ! | CTTTCCATATAGAGTTCTTT+TGG | - | chr6_2:44234676-44234695 | Msa0918040:five_prime_UTR | 30.0% |
| CACGAGATTCAACTTCAAAA+AGG | - | chr6_2:44225714-44225733 | Msa0918040:three_prime_UTR | 35.0% | |
| GCTATTTAGACACTACATCA+TGG | - | chr6_2:44226056-44226075 | Msa0918040:CDS | 35.0% | |
| GGTTGAGAAAAGATGTTAGA+TGG | + | chr6_2:44226246-44226265 | None:intergenic | 35.0% | |
| ! | GTTGTGATGGTGTAAAATGA+TGG | + | chr6_2:44226297-44226316 | None:intergenic | 35.0% |
| ! | GTTGTGATGGTGTAAATCTT+GGG | + | chr6_2:44226319-44226338 | None:intergenic | 35.0% |
| GTCTATTGTGACTTTGTTCT+TGG | + | chr6_2:44226342-44226361 | None:intergenic | 35.0% | |
| ! | TGAGGTTTGGTCAATTTGAT+TGG | + | chr6_2:44226364-44226383 | None:intergenic | 35.0% |
| ATTCTTCAATTGGGTCATTG+AGG | + | chr6_2:44226382-44226401 | None:intergenic | 35.0% | |
| AAGAAGCTCCAAACATCAAA+AGG | - | chr6_2:44226439-44226458 | Msa0918040:intron | 35.0% | |
| AGAAGCTCCAAACATCAAAA+GGG | - | chr6_2:44226440-44226459 | Msa0918040:intron | 35.0% | |
| !!! | AACGTTGTTGTTGTTTTGCA+GGG | - | chr6_2:44226526-44226545 | Msa0918040:intron | 35.0% |
| !! | GGGCAATTTGGTAATTTTGA+AGG | - | chr6_2:44226567-44226586 | Msa0918040:intron | 35.0% |
| TAGCAGTGAGAATTCATGTT+GGG | + | chr6_2:44227524-44227543 | None:intergenic | 35.0% | |
| TTAGCAGTGAGAATTCATGT+TGG | + | chr6_2:44227525-44227544 | None:intergenic | 35.0% | |
| CACAAACACAAAGTTAACCT+AGG | + | chr6_2:44227565-44227584 | None:intergenic | 35.0% | |
| CTAGGTTAACTTTGTGTTTG+TGG | - | chr6_2:44227563-44227582 | Msa0918040:intron | 35.0% | |
| ACAACACCAATCAAGTTTGA+GGG | + | chr6_2:44227688-44227707 | None:intergenic | 35.0% | |
| TACTAGAAGTTCAGTGACTT+TGG | - | chr6_2:44227875-44227894 | Msa0918040:CDS | 35.0% | |
| TCAGTGACTTTGGTATAGTT+AGG | - | chr6_2:44227885-44227904 | Msa0918040:CDS | 35.0% | |
| TGACTTTGGTATAGTTAGGT+AGG | - | chr6_2:44227889-44227908 | Msa0918040:CDS | 35.0% | |
| TTGGTATAGTTAGGTAGGTT+TGG | - | chr6_2:44227894-44227913 | Msa0918040:CDS | 35.0% | |
| ! | AATGTCCTTTTGGCGTATTA+GGG | - | chr6_2:44227946-44227965 | Msa0918040:intron | 35.0% |
| GATATGATTTAGGCTCTGTA+TGG | - | chr6_2:44228131-44228150 | Msa0918040:intron | 35.0% | |
| ! | GATAAGCTAGTTGAAGTGTT+TGG | - | chr6_2:44228238-44228257 | Msa0918040:intron | 35.0% |
| ACGAGCTTATAGCTTATTTC+AGG | + | chr6_2:44228386-44228405 | None:intergenic | 35.0% | |
| GTCCATCCTATAAGATTTGA+AGG | - | chr6_2:44228533-44228552 | Msa0918040:intron | 35.0% | |
| CTCCTTCAAATCTTATAGGA+TGG | + | chr6_2:44228538-44228557 | None:intergenic | 35.0% | |
| CATCCTATAAGATTTGAAGG+AGG | - | chr6_2:44228536-44228555 | Msa0918040:intron | 35.0% | |
| TCTCCTCCTTCAAATCTTAT+AGG | + | chr6_2:44228542-44228561 | None:intergenic | 35.0% | |
| TCTAACACAAACCTAAACCA+TGG | - | chr6_2:44228827-44228846 | Msa0918040:CDS | 35.0% | |
| CAATAAAGCAACCATGGTTT+AGG | + | chr6_2:44228841-44228860 | None:intergenic | 35.0% | |
| GTTTCTCAATAAAGCAACCA+TGG | + | chr6_2:44228847-44228866 | None:intergenic | 35.0% | |
| ACCATACTGTCCTTACATAT+AGG | + | chr6_2:44229110-44229129 | None:intergenic | 35.0% | |
| !! | TAGGGTTCTGAAATGTGTTT+AGG | - | chr6_2:44229272-44229291 | Msa0918040:intron | 35.0% |
| !! | AGGGTTCTGAAATGTGTTTA+GGG | - | chr6_2:44229273-44229292 | Msa0918040:intron | 35.0% |
| ! | TCTGAAATGTGTTTAGGGTA+TGG | - | chr6_2:44229278-44229297 | Msa0918040:intron | 35.0% |
| ACACATTCTAAACCTCACAA+GGG | + | chr6_2:44229729-44229748 | None:intergenic | 35.0% | |
| AACACATTCTAAACCTCACA+AGG | + | chr6_2:44229730-44229749 | None:intergenic | 35.0% | |
| ! | GTGGGTTAAATGACTTTAAG+TGG | - | chr6_2:44229824-44229843 | Msa0918040:intron | 35.0% |
| !! | AGATTTTGACCCAACCTATT+TGG | - | chr6_2:44229964-44229983 | Msa0918040:intron | 35.0% |
| !! | GATTTTGACCCAACCTATTT+GGG | - | chr6_2:44229965-44229984 | Msa0918040:intron | 35.0% |
| !! | ATTTTGACCCAACCTATTTG+GGG | - | chr6_2:44229966-44229985 | Msa0918040:intron | 35.0% |
| ! | CAAAATTTCAAGTCAACCAC+TGG | + | chr6_2:44229997-44230016 | None:intergenic | 35.0% |
| !!! | CAGTGGTTGACTTGAAATTT+TGG | - | chr6_2:44229995-44230014 | Msa0918040:intron | 35.0% |
| ACTCTACATTTGCTTCTTGT+TGG | - | chr6_2:44230464-44230483 | Msa0918040:intron | 35.0% | |
| ! | GCCGTTACTCTACATTATTT+TGG | + | chr6_2:44230600-44230619 | None:intergenic | 35.0% |
| CCAATTTAATTAAAGTGGCG+TGG | + | chr6_2:44230622-44230641 | None:intergenic | 35.0% | |
| ! | CCACGCCACTTTAATTAAAT+TGG | - | chr6_2:44230619-44230638 | Msa0918040:intron | 35.0% |
| TGGTTCATTAGATGAAACTG+CGG | + | chr6_2:44231229-44231248 | None:intergenic | 35.0% | |
| !!! | ATTTGATTCAGGGGCTTTTT+TGG | + | chr6_2:44231282-44231301 | None:intergenic | 35.0% |
| ATGGGATCTCTATTTGATTC+CGG | + | chr6_2:44231326-44231345 | None:intergenic | 35.0% | |
| TGTGTCCACTGCAATTTAAT+GGG | + | chr6_2:44231344-44231363 | None:intergenic | 35.0% | |
| TTGTGTCCACTGCAATTTAA+TGG | + | chr6_2:44231345-44231364 | None:intergenic | 35.0% | |
| ! | TGATTGTTTGTTGAGATGGT+GGG | + | chr6_2:44231396-44231415 | None:intergenic | 35.0% |
| ! | TTGATTGTTTGTTGAGATGG+TGG | + | chr6_2:44231397-44231416 | None:intergenic | 35.0% |
| ! | GTCTTGATTGTTTGTTGAGA+TGG | + | chr6_2:44231400-44231419 | None:intergenic | 35.0% |
| ! | TCCATGAAGATTTAAGACCA+TGG | - | chr6_2:44231460-44231479 | Msa0918040:intron | 35.0% |
| ! | CCATGAAGATTTAAGACCAT+GGG | - | chr6_2:44231461-44231480 | Msa0918040:intron | 35.0% |
| ! | GAGATACTTTTACTCTATGG+GGG | - | chr6_2:44231601-44231620 | Msa0918040:intron | 35.0% |
| TCAAACATAAGCTCCAAATC+AGG | + | chr6_2:44231663-44231682 | None:intergenic | 35.0% | |
| TATTCACTACTTGGAACAAC+TGG | + | chr6_2:44231699-44231718 | None:intergenic | 35.0% | |
| GTTCCAAGTAGTGAATATAG+TGG | - | chr6_2:44231702-44231721 | Msa0918040:intron | 35.0% | |
| !! | AGTGAATATAGTGGACCTAA+TGG | - | chr6_2:44231711-44231730 | Msa0918040:intron | 35.0% |
| TTACCACAATAACGAAAGAG+TGG | + | chr6_2:44231750-44231769 | None:intergenic | 35.0% | |
| ! | TTGTGGTAATGATGCAACAT+TGG | - | chr6_2:44231761-44231780 | Msa0918040:intron | 35.0% |
| TCGAAATTTGACTGACAAGA+CGG | + | chr6_2:44231872-44231891 | None:intergenic | 35.0% | |
| GTCAGTCAAATTTCGACAAT+TGG | - | chr6_2:44231876-44231895 | Msa0918040:intron | 35.0% | |
| ! | GTCATGGTGATTTTTGCATT+AGG | - | chr6_2:44232033-44232052 | Msa0918040:intron | 35.0% |
| AGAGAGAACCTTATGCTTAT+TGG | - | chr6_2:44232613-44232632 | Msa0918040:intron | 35.0% | |
| GAACCTTATGCTTATTGGAA+AGG | - | chr6_2:44232618-44232637 | Msa0918040:intron | 35.0% | |
| TTCCCTTTCCAATAAGCATA+AGG | + | chr6_2:44232624-44232643 | None:intergenic | 35.0% | |
| TTTACATTGAAGGTTCTGCT+TGG | - | chr6_2:44233476-44233495 | Msa0918040:intron | 35.0% | |
| TGAGGTTTCACAAGTAAAGT+GGG | + | chr6_2:44233538-44233557 | None:intergenic | 35.0% | |
| ATGAGGTTTCACAAGTAAAG+TGG | + | chr6_2:44233539-44233558 | None:intergenic | 35.0% | |
| TAATTCCAGTGCATCACTAT+TGG | - | chr6_2:44233584-44233603 | Msa0918040:intron | 35.0% | |
| GCACTTATCATCTTCCTTAA+TGG | + | chr6_2:44233611-44233630 | None:intergenic | 35.0% | |
| !! | CATTAAGTTTGCTGTGGATT+GGG | - | chr6_2:44233636-44233655 | Msa0918040:intron | 35.0% |
| !! | ATTAAGTTTGCTGTGGATTG+GGG | - | chr6_2:44233637-44233656 | Msa0918040:intron | 35.0% |
| ATGATATAGTTCCCTTGAAG+TGG | - | chr6_2:44233769-44233788 | Msa0918040:intron | 35.0% | |
| AATGTGTTTCTCCACTTCAA+GGG | + | chr6_2:44233783-44233802 | None:intergenic | 35.0% | |
| AAATGTGTTTCTCCACTTCA+AGG | + | chr6_2:44233784-44233803 | None:intergenic | 35.0% | |
| AATCCTACAATTCAACTCAC+TGG | - | chr6_2:44233820-44233839 | Msa0918040:CDS | 35.0% | |
| ATCCTACAATTCAACTCACT+GGG | - | chr6_2:44233821-44233840 | Msa0918040:CDS | 35.0% | |
| TGTTTGTGACATTGCTTCAT+AGG | - | chr6_2:44234057-44234076 | Msa0918040:five_prime_UTR | 35.0% | |
| !!! | ACCTTAGAGTCTTTTTGGTT+TGG | - | chr6_2:44234088-44234107 | Msa0918040:five_prime_UTR | 35.0% |
| !!! | CCTTAGAGTCTTTTTGGTTT+GGG | - | chr6_2:44234089-44234108 | Msa0918040:five_prime_UTR | 35.0% |
| ! | ACATGTCTTTTTGCTTCATC+AGG | - | chr6_2:44234173-44234192 | Msa0918040:five_prime_UTR | 35.0% |
| CATTCAAGAAGAGTTGAAGA+TGG | - | chr6_2:44234227-44234246 | Msa0918040:intron | 35.0% | |
| ! | ACAGCTTTGTCACTTATTGA+TGG | + | chr6_2:44234315-44234334 | None:intergenic | 35.0% |
| TGAACTATGTGTGGAATCAA+TGG | - | chr6_2:44234335-44234354 | Msa0918040:intron | 35.0% | |
| ! | TCAATGGTTTGTAAAGCAGA+AGG | - | chr6_2:44234351-44234370 | Msa0918040:intron | 35.0% |
| ! | TATGATGGAATCATTGGTCA+AGG | - | chr6_2:44234389-44234408 | Msa0918040:intron | 35.0% |
| ! | ATGATGGAATCATTGGTCAA+GGG | - | chr6_2:44234390-44234409 | Msa0918040:intron | 35.0% |
| TTCAAAGATGGAGGATCATA+AGG | + | chr6_2:44234450-44234469 | None:intergenic | 35.0% | |
| CTTATTTGTGCGTTCAAAGA+TGG | + | chr6_2:44234462-44234481 | None:intergenic | 35.0% | |
| GCACAAATAAGAAGAAAGCA+AGG | - | chr6_2:44234471-44234490 | Msa0918040:intron | 35.0% | |
| ! | CAATTCAACGAGTCGAATTT+TGG | - | chr6_2:44234496-44234515 | Msa0918040:intron | 35.0% |
| TAATCAAACTCGGTATCCTA+AGG | + | chr6_2:44234591-44234610 | None:intergenic | 35.0% | |
| CTACCCAAAAGAACTCTATA+TGG | + | chr6_2:44234683-44234702 | None:intergenic | 35.0% | |
| TACACCTTGTCTCATATAGT+TGG | - | chr6_2:44234717-44234736 | Msa0918040:five_prime_UTR | 35.0% | |
| TTAGCCAACTATATGAGACA+AGG | + | chr6_2:44234724-44234743 | None:intergenic | 35.0% | |
| !! | CTCTTGTCTTGTGTTGTTTG+CGG | + | chr6_2:44225956-44225975 | None:intergenic | 40.0% |
| CAAGACAAGAGAAAATTCCC+AGG | - | chr6_2:44225965-44225984 | Msa0918040:CDS | 40.0% | |
| ! | GTGTAAATCTTGGGTTGTGA+TGG | + | chr6_2:44226310-44226329 | None:intergenic | 40.0% |
| ! | GGTTGTGATGGTGTAAATCT+TGG | + | chr6_2:44226320-44226339 | None:intergenic | 40.0% |
| ! | ACTTTGTTCTTGGGTTGTGA+TGG | + | chr6_2:44226332-44226351 | None:intergenic | 40.0% |
| TCAATTGGGTCATTGAGGTT+TGG | + | chr6_2:44226377-44226396 | None:intergenic | 40.0% | |
| !!! | CAACGTTGTTGTTGTTTTGC+AGG | - | chr6_2:44226525-44226544 | Msa0918040:intron | 40.0% |
| AGGGAGAGAAAACTACAGAT+CGG | - | chr6_2:44226545-44226564 | Msa0918040:intron | 40.0% | |
| AAATACTCACAGGTGTTTCC+AGG | + | chr6_2:44226682-44226701 | None:intergenic | 40.0% | |
| GCATACTGTCCTTTGTTGAA+TGG | - | chr6_2:44227443-44227462 | Msa0918040:intron | 40.0% | |
| TCAATGGTACGCTTACAATG+AGG | + | chr6_2:44227499-44227518 | None:intergenic | 40.0% | |
| GACAACACCAATCAAGTTTG+AGG | + | chr6_2:44227689-44227708 | None:intergenic | 40.0% | |
| ! | CAATGTCCTTTTGGCGTATT+AGG | - | chr6_2:44227945-44227964 | Msa0918040:intron | 40.0% |
| ! | ATGTCCTTTTGGCGTATTAG+GGG | - | chr6_2:44227947-44227966 | Msa0918040:intron | 40.0% |
| TAAACCCCTAATACGCCAAA+AGG | + | chr6_2:44227954-44227973 | None:intergenic | 40.0% | |
| TCTTGTGCACAGCTGTTTAA+TGG | + | chr6_2:44227977-44227996 | None:intergenic | 40.0% | |
| ! | GTTGCTTTATTGAGAAACGG+TGG | - | chr6_2:44228849-44228868 | Msa0918040:CDS | 40.0% |
| GGTACCCTCTTACAAACATA+TGG | + | chr6_2:44228911-44228930 | None:intergenic | 40.0% | |
| TTTACCTCAGACTCAGACAA+AGG | + | chr6_2:44228932-44228951 | None:intergenic | 40.0% | |
| GCCTATATGTAAGGACAGTA+TGG | - | chr6_2:44229106-44229125 | Msa0918040:CDS | 40.0% | |
| AGAACCCTAAAGCGAAAACA+TGG | + | chr6_2:44229261-44229280 | None:intergenic | 40.0% | |
| !! | TTCTAAGGCCTAATGAGTGT+CGG | - | chr6_2:44229333-44229352 | Msa0918040:intron | 40.0% |
| ! | TAATTTTGCACCCCAGTTGA+TGG | - | chr6_2:44229497-44229516 | Msa0918040:intron | 40.0% |
| TTCTAAACCTCACAAGGGAA+AGG | + | chr6_2:44229724-44229743 | None:intergenic | 40.0% | |
| !! | TTTGGAGTGCGCTTTTAGAA+CGG | - | chr6_2:44230013-44230032 | Msa0918040:intron | 40.0% |
| !! | GGATTAGTTGGTCTTTGGAT+CGG | - | chr6_2:44230071-44230090 | Msa0918040:intron | 40.0% |
| !!! | CTACATTATTTTGGCAACGC+TGG | + | chr6_2:44230591-44230610 | None:intergenic | 40.0% |
| TTGGGGAGATCTAGTTATGT+AGG | - | chr6_2:44230638-44230657 | Msa0918040:intron | 40.0% | |
| TGGGGAGATCTAGTTATGTA+GGG | - | chr6_2:44230639-44230658 | Msa0918040:intron | 40.0% | |
| CGGCTACATAGATCGAATTA+CGG | + | chr6_2:44231045-44231064 | None:intergenic | 40.0% | |
| CGTAATTCGATCTATGTAGC+CGG | - | chr6_2:44231043-44231062 | Msa0918040:intron | 40.0% | |
| ACCATAATGTCTCTGTGTGT+AGG | - | chr6_2:44231194-44231213 | Msa0918040:intron | 40.0% | |
| TCCTACACACAGAGACATTA+TGG | + | chr6_2:44231198-44231217 | None:intergenic | 40.0% | |
| ATAATGTCTCTGTGTGTAGG+AGG | - | chr6_2:44231197-44231216 | Msa0918040:intron | 40.0% | |
| GAGATCCCATTAAATTGCAG+TGG | - | chr6_2:44231336-44231355 | Msa0918040:intron | 40.0% | |
| ! | CCCATGGTCTTAAATCTTCA+TGG | + | chr6_2:44231464-44231483 | None:intergenic | 40.0% |
| TTCCTTTGTTACTCCTGTGT+GGG | + | chr6_2:44231487-44231506 | None:intergenic | 40.0% | |
| ! | CCAAATCAGGCAATTTTCCA+GGG | + | chr6_2:44231650-44231669 | None:intergenic | 40.0% |
| ! | TCCAAATCAGGCAATTTTCC+AGG | + | chr6_2:44231651-44231670 | None:intergenic | 40.0% |
| GGTCCACTATATTCACTACT+TGG | + | chr6_2:44231708-44231727 | None:intergenic | 40.0% | |
| !! | TTTTTCCTGATTGGTCCTTC+TGG | - | chr6_2:44231790-44231809 | Msa0918040:intron | 40.0% |
| !! | TTTTCCTGATTGGTCCTTCT+GGG | - | chr6_2:44231791-44231810 | Msa0918040:intron | 40.0% |
| CAAGACGGCCTTAAACAAAT+CGG | + | chr6_2:44231857-44231876 | None:intergenic | 40.0% | |
| TGAAACCAACGTAAAGCCAT+GGG | - | chr6_2:44232539-44232558 | Msa0918040:intron | 40.0% | |
| AAAGCCATGGGAGATTCTAT+TGG | - | chr6_2:44232551-44232570 | Msa0918040:intron | 40.0% | |
| AAGCCATGGGAGATTCTATT+GGG | - | chr6_2:44232552-44232571 | Msa0918040:intron | 40.0% | |
| TAAGGTTCTCTCTTCATCCA+TGG | + | chr6_2:44232606-44232625 | None:intergenic | 40.0% | |
| !! | TGTCTTGTTTCAGCAACACT+TGG | + | chr6_2:44232648-44232667 | None:intergenic | 40.0% |
| GAATGCTCGATTATATGAGC+AGG | - | chr6_2:44232707-44232726 | Msa0918040:intron | 40.0% | |
| ACATAAATTGGCCATTAGGG+AGG | + | chr6_2:44232888-44232907 | None:intergenic | 40.0% | |
| AGGGTACAAGAAATCTGACT+TGG | - | chr6_2:44233256-44233275 | Msa0918040:intron | 40.0% | |
| !! | CAAGTCCATTAAGTTTGCTG+TGG | - | chr6_2:44233630-44233649 | Msa0918040:intron | 40.0% |
| CCAATCCACAGCAAACTTAA+TGG | + | chr6_2:44233638-44233657 | None:intergenic | 40.0% | |
| !! | CCATTAAGTTTGCTGTGGAT+TGG | - | chr6_2:44233635-44233654 | Msa0918040:intron | 40.0% |
| GGGCAATAGTCACAAAACAA+AGG | - | chr6_2:44233657-44233676 | Msa0918040:intron | 40.0% | |
| ! | TTCCCAGTGAGTTGAATTGT+AGG | + | chr6_2:44233826-44233845 | None:intergenic | 40.0% |
| CCCAAACCAAAAAGACTCTA+AGG | + | chr6_2:44234092-44234111 | None:intergenic | 40.0% | |
| CAAAGCTGTTGAACTATGTG+TGG | - | chr6_2:44234326-44234345 | Msa0918040:intron | 40.0% | |
| GTGCATGGATTTGTGTTTGA+AGG | + | chr6_2:44234417-44234436 | None:intergenic | 40.0% | |
| AAAGATGGAGGATCATAAGG+AGG | + | chr6_2:44234447-44234466 | None:intergenic | 40.0% | |
| ATTTGTGCGTTCAAAGATGG+AGG | + | chr6_2:44234459-44234478 | None:intergenic | 40.0% | |
| GGGAGAGAAAACTACAGATC+GGG | - | chr6_2:44226546-44226565 | Msa0918040:intron | 45.0% | |
| GGAGAGAAAACTACAGATCG+GGG | - | chr6_2:44226547-44226566 | Msa0918040:intron | 45.0% | |
| AACTACAGATCGGGGCAATT+TGG | - | chr6_2:44226555-44226574 | Msa0918040:intron | 45.0% | |
| ! | TTTCCGGTGGTGTTAATCGT+CGG | - | chr6_2:44226635-44226654 | Msa0918040:intron | 45.0% |
| GAATTCATGTTGGGCGTCAA+TGG | + | chr6_2:44227515-44227534 | None:intergenic | 45.0% | |
| GGTTTGCCCTCAAACTTGAT+TGG | - | chr6_2:44227679-44227698 | Msa0918040:intron | 45.0% | |
| TCTAAGAGTAGGGCTCTGTT+TGG | + | chr6_2:44228508-44228527 | None:intergenic | 45.0% | |
| AACAGAGCCCTACTCTTAGA+TGG | - | chr6_2:44228508-44228527 | Msa0918040:intron | 45.0% | |
| GGGACATAACACGAAACATG+AGG | - | chr6_2:44229235-44229254 | Msa0918040:CDS | 45.0% | |
| ! | TGAGGCCATGTTTTCGCTTT+AGG | - | chr6_2:44229253-44229272 | Msa0918040:intron | 45.0% |
| ! | GAGGCCATGTTTTCGCTTTA+GGG | - | chr6_2:44229254-44229273 | Msa0918040:intron | 45.0% |
| GTCATAGGTAGGTCCACAAA+AGG | + | chr6_2:44229431-44229450 | None:intergenic | 45.0% | |
| GGGTCGTAAAAGTCATAGGT+AGG | + | chr6_2:44229442-44229461 | None:intergenic | 45.0% | |
| ACGTGGGTCGTAAAAGTCAT+AGG | + | chr6_2:44229446-44229465 | None:intergenic | 45.0% | |
| !!! | TACGACCCACGTTTTTTCGA+AGG | - | chr6_2:44229454-44229473 | Msa0918040:intron | 45.0% |
| CCGTTCCTTCGAAAAAACGT+GGG | + | chr6_2:44229462-44229481 | None:intergenic | 45.0% | |
| !!! | CCCACGTTTTTTCGAAGGAA+CGG | - | chr6_2:44229459-44229478 | Msa0918040:intron | 45.0% |
| ! | GGCTTCAGTGATTTTGTGGT+GGG | - | chr6_2:44229523-44229542 | Msa0918040:intron | 45.0% |
| !!! | GATTTTGTGGTGGGTGACTT+TGG | - | chr6_2:44229532-44229551 | Msa0918040:intron | 45.0% |
| ! | ACTTTGGCTTCGATGTCTTG+CGG | + | chr6_2:44229664-44229683 | None:intergenic | 45.0% |
| AGGCAACAACACACGTTAAC+CGG | + | chr6_2:44229704-44229723 | None:intergenic | 45.0% | |
| !!! | TTGGAGTGCGCTTTTAGAAC+GGG | - | chr6_2:44230014-44230033 | Msa0918040:intron | 45.0% |
| !! | ATTGATCCCCTCGGATTAGT+TGG | - | chr6_2:44230059-44230078 | Msa0918040:intron | 45.0% |
| CAAAGACCAACTAATCCGAG+GGG | + | chr6_2:44230068-44230087 | None:intergenic | 45.0% | |
| CCAAAGACCAACTAATCCGA+GGG | + | chr6_2:44230069-44230088 | None:intergenic | 45.0% | |
| TCCAAAGACCAACTAATCCG+AGG | + | chr6_2:44230070-44230089 | None:intergenic | 45.0% | |
| ! | TTGTGGGACATTTTCCAGTG+AGG | + | chr6_2:44231368-44231387 | None:intergenic | 45.0% |
| !! | GAGATGGTGGGATTGTTTGT+GGG | + | chr6_2:44231384-44231403 | None:intergenic | 45.0% |
| !! | TGAGATGGTGGGATTGTTTG+TGG | + | chr6_2:44231385-44231404 | None:intergenic | 45.0% |
| GACACGTGGAAGTAGATGAA+TGG | + | chr6_2:44231422-44231441 | None:intergenic | 45.0% | |
| TGGATCCAACGGAAGTAATC+AGG | + | chr6_2:44231444-44231463 | None:intergenic | 45.0% | |
| CTTCCTTTGTTACTCCTGTG+TGG | + | chr6_2:44231488-44231507 | None:intergenic | 45.0% | |
| GGGGGATTCTACAGTTGTTA+AGG | - | chr6_2:44231619-44231638 | Msa0918040:intron | 45.0% | |
| !! | CAGTTGTTAAGGAAGTACCC+TGG | - | chr6_2:44231630-44231649 | Msa0918040:intron | 45.0% |
| CCCTGGAAAATTGCCTGATT+TGG | - | chr6_2:44231647-44231666 | Msa0918040:intron | 45.0% | |
| CAATAACGAAAGAGTGGTGG+TGG | + | chr6_2:44231744-44231763 | None:intergenic | 45.0% | |
| CCACAATAACGAAAGAGTGG+TGG | + | chr6_2:44231747-44231766 | None:intergenic | 45.0% | |
| CCACCACTCTTTCGTTATTG+TGG | - | chr6_2:44231744-44231763 | Msa0918040:intron | 45.0% | |
| ! | TTTCCTGATTGGTCCTTCTG+GGG | - | chr6_2:44231792-44231811 | Msa0918040:intron | 45.0% |
| !! | CATGGCTTTACGTTGGTTTC+AGG | + | chr6_2:44232540-44232559 | None:intergenic | 45.0% |
| CTGAAACCAACGTAAAGCCA+TGG | - | chr6_2:44232538-44232557 | Msa0918040:intron | 45.0% | |
| ! | AATCTCCCATGGCTTTACGT+TGG | + | chr6_2:44232547-44232566 | None:intergenic | 45.0% |
| TCTCCCAATAGAATCTCCCA+TGG | + | chr6_2:44232558-44232577 | None:intergenic | 45.0% | |
| TCTATTGGGAGAGCTGAATG+AGG | - | chr6_2:44232566-44232585 | Msa0918040:intron | 45.0% | |
| CTATTGGGAGAGCTGAATGA+GGG | - | chr6_2:44232567-44232586 | Msa0918040:intron | 45.0% | |
| AGCTGAATGAGGGCAACAAA+AGG | - | chr6_2:44232577-44232596 | Msa0918040:intron | 45.0% | |
| AGGGCAACAAAAGGATTCCA+TGG | - | chr6_2:44232586-44232605 | Msa0918040:intron | 45.0% | |
| GCATCACTATTGGCCCATTA+AGG | - | chr6_2:44233594-44233613 | Msa0918040:intron | 45.0% | |
| CTTCATCAGGCACACGAAAT+TGG | - | chr6_2:44234186-44234205 | Msa0918040:intron | 45.0% | |
| !! | AACTAATTATAAATATAATT+TGG | + | chr6_2:44227330-44227349 | None:intergenic | 5.0% |
| !!! | ACTTATTTATATTTTAAAAT+AGG | - | chr6_2:44227658-44227677 | Msa0918040:intron | 5.0% |
| !!! | TAATATTAATAACTTTTTTT+AGG | - | chr6_2:44230164-44230183 | Msa0918040:intron | 5.0% |
| !!! | AATATTAATAACTTTTTTTA+GGG | - | chr6_2:44230165-44230184 | Msa0918040:intron | 5.0% |
| !! | TAGTAATAATTTAAATTTAA+AGG | + | chr6_2:44232179-44232198 | None:intergenic | 5.0% |
| !!! | AAAATTTTCATTTTTAATTT+GGG | + | chr6_2:44233206-44233225 | None:intergenic | 5.0% |
| CACCACCGGAAACACCAATA+CGG | + | chr6_2:44226627-44226646 | None:intergenic | 50.0% | |
| TGGACGGCCATCTAAGAGTA+GGG | + | chr6_2:44228518-44228537 | None:intergenic | 50.0% | |
| ATGGACGGCCATCTAAGAGT+AGG | + | chr6_2:44228519-44228538 | None:intergenic | 50.0% | |
| GGTACCTTTGTCTGAGTCTG+AGG | - | chr6_2:44228925-44228944 | Msa0918040:CDS | 50.0% | |
| ! | TTGGTTGGCCGACACTCATT+AGG | + | chr6_2:44229344-44229363 | None:intergenic | 50.0% |
| ! | GAAGACCACGTGTCCTTTTG+TGG | - | chr6_2:44229415-44229434 | Msa0918040:intron | 50.0% |
| TAGGTCCACAAAAGGACACG+TGG | + | chr6_2:44229423-44229442 | None:intergenic | 50.0% | |
| GCCGTTCCTTCGAAAAAACG+TGG | + | chr6_2:44229463-44229482 | None:intergenic | 50.0% | |
| !!! | TTTTGCACCCCAGTTGATGG+TGG | - | chr6_2:44229500-44229519 | Msa0918040:intron | 50.0% |
| !! | TTTGCACCCCAGTTGATGGT+GGG | - | chr6_2:44229501-44229520 | Msa0918040:intron | 50.0% |
| ! | GTGGGGCTTCAGTGATTTTG+TGG | - | chr6_2:44229519-44229538 | Msa0918040:intron | 50.0% |
| ! | GGGCTTCAGTGATTTTGTGG+TGG | - | chr6_2:44229522-44229541 | Msa0918040:intron | 50.0% |
| CAACAACACACGTTAACCGG+GGG | + | chr6_2:44229701-44229720 | None:intergenic | 50.0% | |
| GCAACAACACACGTTAACCG+GGG | + | chr6_2:44229702-44229721 | None:intergenic | 50.0% | |
| GGCAACAACACACGTTAACC+GGG | + | chr6_2:44229703-44229722 | None:intergenic | 50.0% | |
| GTTGTTGCCTTTCCCTTGTG+AGG | - | chr6_2:44229714-44229733 | Msa0918040:intron | 50.0% | |
| ! | TGACCCAACCTATTTGGGGT+TGG | - | chr6_2:44229970-44229989 | Msa0918040:intron | 50.0% |
| !!! | TGGAGTGCGCTTTTAGAACG+GGG | - | chr6_2:44230015-44230034 | Msa0918040:intron | 50.0% |
| !! | CCCTCGGATTAGTTGGTCTT+TGG | - | chr6_2:44230066-44230085 | Msa0918040:intron | 50.0% |
| ACGGAAGTAATCAGGACACG+TGG | + | chr6_2:44231436-44231455 | None:intergenic | 50.0% | |
| CGTGTCCTGATTACTTCCGT+TGG | - | chr6_2:44231436-44231455 | Msa0918040:intron | 50.0% | |
| !! | GGTGGTGGATCAACACCATT+AGG | + | chr6_2:44231729-44231748 | None:intergenic | 50.0% |
| GATGACTTACCATCCCCAGA+AGG | + | chr6_2:44231808-44231827 | None:intergenic | 50.0% | |
| GAAGATGCATGACAAGTGCG+TGG | + | chr6_2:44231995-44232014 | None:intergenic | 50.0% | |
| ATGGGCCAATAGTGATGCAC+TGG | + | chr6_2:44233592-44233611 | None:intergenic | 50.0% | |
| ! | CGATTTGGACGTACGCTATC+TGG | - | chr6_2:44234034-44234053 | Msa0918040:five_prime_UTR | 50.0% |
| AGGATCATAAGGAGGAGGCA+TGG | + | chr6_2:44234439-44234458 | None:intergenic | 50.0% | |
| GATGGAGGATCATAAGGAGG+AGG | + | chr6_2:44234444-44234463 | None:intergenic | 50.0% | |
| GTCGAGATTCACCGCCGTAT+TGG | - | chr6_2:44226610-44226629 | Msa0918040:intron | 55.0% | |
| ! | CACCGCCGTATTGGTGTTTC+CGG | - | chr6_2:44226619-44226638 | Msa0918040:intron | 55.0% |
| CACCGGAAACACCAATACGG+CGG | + | chr6_2:44226624-44226643 | None:intergenic | 55.0% | |
| !! | TTGCACCCCAGTTGATGGTG+GGG | - | chr6_2:44229502-44229521 | Msa0918040:intron | 55.0% |
| TGAAGCCCCACCATCAACTG+GGG | + | chr6_2:44229510-44229529 | None:intergenic | 55.0% | |
| CTGAAGCCCCACCATCAACT+GGG | + | chr6_2:44229511-44229530 | None:intergenic | 55.0% | |
| ACTGAAGCCCCACCATCAAC+TGG | + | chr6_2:44229512-44229531 | None:intergenic | 55.0% | |
| AACACACGTTAACCGGGGGT+GGG | + | chr6_2:44229697-44229716 | None:intergenic | 55.0% | |
| GGGCCAACCCCAAATAGGTT+GGG | + | chr6_2:44229976-44229995 | None:intergenic | 55.0% | |
| TGGGCCAACCCCAAATAGGT+TGG | + | chr6_2:44229977-44229996 | None:intergenic | 55.0% | |
| TCAATCCCACCACCCACTTG+TGG | + | chr6_2:44230044-44230063 | None:intergenic | 55.0% | |
| TGCAGTGGACACAACCTCAC+TGG | - | chr6_2:44231351-44231370 | Msa0918040:intron | 55.0% | |
| TTAAGACCATGGGCCCACAC+AGG | - | chr6_2:44231471-44231490 | Msa0918040:intron | 55.0% | |
| GGCCCACACAGGAGTAACAA+AGG | - | chr6_2:44231482-44231501 | Msa0918040:intron | 55.0% | |
| CATCCCCAGAAGGACCAATC+AGG | + | chr6_2:44231798-44231817 | None:intergenic | 55.0% | |
| ! | CTGATTGGTCCTTCTGGGGA+TGG | - | chr6_2:44231796-44231815 | Msa0918040:intron | 55.0% |
| TGGGGACGAGAGTCACAACA+AGG | - | chr6_2:44233236-44233255 | Msa0918040:intron | 55.0% | |
| GGGGACGAGAGTCACAACAA+GGG | - | chr6_2:44233237-44233256 | Msa0918040:intron | 55.0% | |
| TGGCAGCTCAATGCACCCAT+AGG | - | chr6_2:44233276-44233295 | Msa0918040:intron | 55.0% | |
| ! | TAAGGAGGAGGCATGGTGCA+TGG | + | chr6_2:44234432-44234451 | None:intergenic | 55.0% |
| ! | CGCCGTATTGGTGTTTCCGG+TGG | - | chr6_2:44226622-44226641 | Msa0918040:intron | 60.0% |
| ! | GCGCCGACGATTAACACCAC+CGG | + | chr6_2:44226641-44226660 | None:intergenic | 60.0% |
| GGTGTTAATCGTCGGCGCGT+TGG | - | chr6_2:44226643-44226662 | Msa0918040:intron | 60.0% | |
| GGTGGGGGCTTCAGTGACTT+TGG | + | chr6_2:44229680-44229699 | None:intergenic | 60.0% | |
| ACACACGTTAACCGGGGGTG+GGG | + | chr6_2:44229696-44229715 | None:intergenic | 60.0% | |
| CAACACACGTTAACCGGGGG+TGG | + | chr6_2:44229698-44229717 | None:intergenic | 60.0% | |
| CCACTGGGCCAACCCCAAAT+AGG | + | chr6_2:44229981-44230000 | None:intergenic | 60.0% | |
| !! | CCTATTTGGGGTTGGCCCAG+TGG | - | chr6_2:44229978-44229997 | Msa0918040:intron | 60.0% |
| TAGAACGGGGCCTCCACAAG+TGG | - | chr6_2:44230028-44230047 | Msa0918040:intron | 60.0% | |
| AGAACGGGGCCTCCACAAGT+GGG | - | chr6_2:44230029-44230048 | Msa0918040:intron | 60.0% | |
| ATCCCACCACCCACTTGTGG+AGG | + | chr6_2:44230041-44230060 | None:intergenic | 60.0% | |
| !! | GGTGGTGGGATTGATCCCCT+CGG | - | chr6_2:44230050-44230069 | Msa0918040:intron | 60.0% |
| GTTACTCCTGTGTGGGCCCA+TGG | + | chr6_2:44231480-44231499 | None:intergenic | 60.0% | |
| GTTGGTGTACGCGCGGTTCC+TGG | - | chr6_2:44226661-44226680 | Msa0918040:intron | 65.0% | |
| CACACGTTAACCGGGGGTGG+GGG | + | chr6_2:44229695-44229714 | None:intergenic | 65.0% | |
| GGCCTCCACAAGTGGGTGGT+GGG | - | chr6_2:44230036-44230055 | Msa0918040:intron | 65.0% | |
| ! | TCGGCGCGTTGGTGTACGCG+CGG | - | chr6_2:44226654-44226673 | Msa0918040:intron | 70.0% |
| GTCACTGAAGCCCCCACCCC+CGG | - | chr6_2:44229682-44229701 | Msa0918040:intron | 70.0% | |
| ACGGGGCCTCCACAAGTGGG+TGG | - | chr6_2:44230032-44230051 | Msa0918040:intron | 70.0% | |
| GGGCCTCCACAAGTGGGTGG+TGG | - | chr6_2:44230035-44230054 | Msa0918040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 44225609 | 44234877 | 44225609 | ID=Msa0918040;Name=Msa0918040 |
| chr6_2 | mRNA | 44225609 | 44234877 | 44225609 | ID=Msa0918040-mRNA-1;Parent=Msa0918040;Name=Msa0918040-mRNA-1;_AED=0.11;_eAED=0.11;_QI=576|0.87|0.88|1|0.62|0.55|9|320|494 |
| chr6_2 | exon | 44225609 | 44226291 | 44225609 | ID=Msa0918040-mRNA-1:exon:7039;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44226808 | 44227018 | 44226808 | ID=Msa0918040-mRNA-1:exon:7038;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44227189 | 44227253 | 44227189 | ID=Msa0918040-mRNA-1:exon:7037;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44227800 | 44227950 | 44227800 | ID=Msa0918040-mRNA-1:exon:7036;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44228669 | 44229270 | 44228669 | ID=Msa0918040-mRNA-1:exon:7035;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44233795 | 44233939 | 44233795 | ID=Msa0918040-mRNA-1:exon:7034;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44234025 | 44234142 | 44234025 | ID=Msa0918040-mRNA-1:exon:7033;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44234165 | 44234192 | 44234165 | ID=Msa0918040-mRNA-1:exon:7032;Parent=Msa0918040-mRNA-1 |
| chr6_2 | exon | 44234500 | 44234877 | 44234500 | ID=Msa0918040-mRNA-1:exon:7031;Parent=Msa0918040-mRNA-1 |
| chr6_2 | five_prime_UTR | 44234500 | 44234877 | 44234500 | ID=Msa0918040-mRNA-1:five_prime_utr;Parent=Msa0918040-mRNA-1 |
| chr6_2 | five_prime_UTR | 44234165 | 44234192 | 44234165 | ID=Msa0918040-mRNA-1:five_prime_utr;Parent=Msa0918040-mRNA-1 |
| chr6_2 | five_prime_UTR | 44234025 | 44234142 | 44234025 | ID=Msa0918040-mRNA-1:five_prime_utr;Parent=Msa0918040-mRNA-1 |
| chr6_2 | five_prime_UTR | 44233888 | 44233939 | 44233888 | ID=Msa0918040-mRNA-1:five_prime_utr;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44233795 | 44233887 | 44233795 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44228669 | 44229270 | 44228669 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44227800 | 44227950 | 44227800 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44227189 | 44227253 | 44227189 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44226808 | 44227018 | 44226808 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | CDS | 44225929 | 44226291 | 44225929 | ID=Msa0918040-mRNA-1:cds;Parent=Msa0918040-mRNA-1 |
| chr6_2 | three_prime_UTR | 44225609 | 44225928 | 44225609 | ID=Msa0918040-mRNA-1:three_prime_utr;Parent=Msa0918040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
