Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920090 | YP_009237615.1 | 99.135 | 578 | 5 | 0 | 79 | 656 | 1 | 578 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920090 | sp|Q04647|CCBS_DAUCA | 89.619 | 578 | 56 | 3 | 82 | 656 | 3 | 579 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0920090 | Msa0983470 | 0.826493 | 2.632359e-54 | -8.615850e-47 |
| Msa0920090 | Msa1392110 | 0.871155 | 8.474034e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920090 | MtrunA17_MTg0490401 | 99.135 | 578 | 5 | 0 | 79 | 656 | 1 | 578 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920090 | ATMG00830.1 | 90.054 | 372 | 34 | 3 | 82 | 452 | 5 | 374 | 0.0 | 662 |
| Msa0920090 | ATMG00960.1 | 91.626 | 203 | 17 | 0 | 454 | 656 | 1 | 203 | 7.27e-130 | 381 |
| Msa0920090 | AT2G07768.1 | 92.742 | 124 | 9 | 0 | 533 | 656 | 31 | 154 | 3.03e-71 | 228 |
Find 176 sgRNAs with CRISPR-Local
Find 580 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAATTCGATTCTGTTTC+TGG | 0.077124 | 6_2:-53412206 | None:intergenic |
| GCAAAGCTAATTATCCTTTC+AGG | 0.144738 | 6_2:-53411502 | None:intergenic |
| GTCGGGGTGGCTGGTGGTTT+CGG | 0.161441 | 6_2:+53412298 | Msa0920090:CDS |
| TTCTACCCCTTCTTCATTCT+TGG | 0.164028 | 6_2:+53412385 | Msa0920090:CDS |
| TCGGGGTGGCTGGTGGTTTC+GGG | 0.193497 | 6_2:+53412299 | Msa0920090:CDS |
| CTTTCATTTATCGTTATTTC+CGG | 0.195605 | 6_2:+53410988 | Msa0920090:CDS |
| CCGATGCCTGCTGCTTCATC+TGG | 0.216766 | 6_2:-53412575 | None:intergenic |
| AGGTCAGGGGCGGCCGGCCC+GGG | 0.220901 | 6_2:+53410697 | Msa0920090:CDS |
| ATGGATTCCTTCTTTGTTAC+CGG | 0.230432 | 6_2:+53411242 | Msa0920090:CDS |
| TTGTAATTTGATAAGTTATT+AGG | 0.233064 | 6_2:-53411121 | None:intergenic |
| ATAATAGTTCTTATCTTATT+AGG | 0.233529 | 6_2:+53410677 | Msa0920090:CDS |
| ACCAGAAACAGAATCGAATT+TGG | 0.272737 | 6_2:+53412205 | Msa0920090:CDS |
| CCACTACTTCGCCTCTTTGT+TGG | 0.293559 | 6_2:+53412148 | Msa0920090:CDS |
| GATAATTAGCTTTGCTCCTC+TGG | 0.304044 | 6_2:+53411510 | Msa0920090:CDS |
| GTCGCCAGTGCTATGGGCTT+TGG | 0.335595 | 6_2:+53411808 | Msa0920090:CDS |
| TTCGATTCTGTTTCTGGTCC+TGG | 0.339801 | 6_2:-53412200 | None:intergenic |
| ACCTGCTGGGTTGGGTGGCC+GGG | 0.358547 | 6_2:-53410832 | None:intergenic |
| TGATGAGCCCACCAACTTCC+TGG | 0.360489 | 6_2:-53412267 | None:intergenic |
| GGAACGCTGCTTCGCTCTGC+TGG | 0.364326 | 6_2:+53411910 | Msa0920090:CDS |
| ATGAATTAGGTCGGGGTGGC+TGG | 0.365514 | 6_2:+53412289 | Msa0920090:CDS |
| GGTCAGGGGCGGCCGGCCCG+GGG | 0.377015 | 6_2:+53410698 | Msa0920090:CDS |
| TTTCATTTATCGTTATTTCC+GGG | 0.377926 | 6_2:+53410989 | Msa0920090:CDS |
| ACTATCGCTGTTTGGTCATA+AGG | 0.378313 | 6_2:+53410654 | Msa0920090:CDS |
| CAATTCTTCCATAACATAAC+GGG | 0.379349 | 6_2:-53412681 | None:intergenic |
| TTGGTGCAGCACCTGCATTT+TGG | 0.380040 | 6_2:+53411056 | Msa0920090:CDS |
| CCCTACTCCCAACAAGTTGC+TGG | 0.380321 | 6_2:+53410618 | Msa0920090:CDS |
| GACTCATCCTTTGTTGCATC+TGG | 0.380542 | 6_2:+53411573 | Msa0920090:CDS |
| TGCATTCTTCTTACTTTCCT+CGG | 0.381773 | 6_2:+53411079 | Msa0920090:CDS |
| AGTCATACAAAACTTCTCTA+TGG | 0.386852 | 6_2:-53411303 | None:intergenic |
| AGTTCTTATCTTATTAGGTC+AGG | 0.387112 | 6_2:+53410682 | Msa0920090:CDS |
| GGCTCATCATGAATTAGGTC+GGG | 0.391694 | 6_2:+53412281 | Msa0920090:CDS |
| GCCTTCTCTTCGCTCTGGAC+AGG | 0.394164 | 6_2:+53412063 | Msa0920090:CDS |
| TGGTGGGCTCATCATGAATT+AGG | 0.396242 | 6_2:+53412276 | Msa0920090:CDS |
| ACTCTTCCATGCTGTGTCTC+AGG | 0.398610 | 6_2:+53412429 | Msa0920090:CDS |
| ATCGATGAACAGCGGATTGA+CGG | 0.399729 | 6_2:+53411625 | Msa0920090:CDS |
| GATATAGGATCTTGTGGAAC+AGG | 0.403997 | 6_2:-53411751 | None:intergenic |
| CTCCCAACAAGTTGCTGGTC+GGG | 0.406911 | 6_2:+53410623 | Msa0920090:CDS |
| GAAGCCTGCTCATGCTGCTT+TGG | 0.409092 | 6_2:+53412028 | Msa0920090:CDS |
| GAACGAAGGGAGTGTACAAC+TGG | 0.409966 | 6_2:-53411396 | None:intergenic |
| CGGAGACGTCGCCAGTGCTA+TGG | 0.412857 | 6_2:+53411801 | Msa0920090:CDS |
| ATGAAGAAGGGGTAGAATTA+CGG | 0.416039 | 6_2:-53412379 | None:intergenic |
| TCCTGCCTACAAGTAGGCTT+AGG | 0.423304 | 6_2:-53410556 | None:intergenic |
| CAGCGGATTGACGGAGCTCT+TGG | 0.428027 | 6_2:+53411634 | Msa0920090:CDS |
| GCCGCCAAAGCAGCATGAGC+AGG | 0.429464 | 6_2:-53412032 | None:intergenic |
| GCCTGCTCATGCTGCTTTGG+CGG | 0.433958 | 6_2:+53412031 | Msa0920090:CDS |
| TAGATATGCCGGTCATTAGA+AGG | 0.439323 | 6_2:-53412539 | None:intergenic |
| TCAGTTACAATGTCTAGGTT+GGG | 0.443024 | 6_2:+53410582 | Msa0920090:CDS |
| ACGAAGAAATTTCGAACAAA+AGG | 0.443178 | 6_2:-53411700 | None:intergenic |
| AACTTCGTTCGCGAAGGAAC+CGG | 0.448431 | 6_2:+53411440 | Msa0920090:CDS |
| TGGATTCCTTCTTTGTTACC+GGG | 0.450382 | 6_2:+53411243 | Msa0920090:CDS |
| GGAGGATGTATAGCTGATAT+AGG | 0.451975 | 6_2:-53411766 | None:intergenic |
| AACCCCGCCCCGTTATGTTA+TGG | 0.452029 | 6_2:+53412673 | Msa0920090:CDS |
| AAGGATCGGAACTCGCTGAT+AGG | 0.455632 | 6_2:-53411681 | None:intergenic |
| AGTGGACACGGGGAGGGAGC+AGG | 0.457218 | 6_2:+53412092 | Msa0920090:CDS |
| CGAAGGAACCGGACGTTTGA+CGG | 0.458427 | 6_2:+53411451 | Msa0920090:CDS |
| AAGAAACAACCACCTGCGTT+TGG | 0.464691 | 6_2:+53411037 | Msa0920090:CDS |
| CAAAGCTAATTATCCTTTCA+GGG | 0.466260 | 6_2:-53411501 | None:intergenic |
| GCATCATGCCAGGAAGTTGG+TGG | 0.466426 | 6_2:+53412259 | Msa0920090:CDS |
| TTCAGTTACAATGTCTAGGT+TGG | 0.466903 | 6_2:+53410581 | Msa0920090:CDS |
| GCTTTGCTCCTCTGGGTGCT+AGG | 0.467625 | 6_2:+53411518 | Msa0920090:CDS |
| ATCCCGACCAGCAACTTGTT+GGG | 0.468533 | 6_2:-53410625 | None:intergenic |
| CTTCCATAACATAACGGGGC+GGG | 0.470534 | 6_2:-53412676 | None:intergenic |
| CCAGCAACTTGTTGGGAGTA+GGG | 0.474924 | 6_2:-53410618 | None:intergenic |
| TTCCATAACATAACGGGGCG+GGG | 0.476106 | 6_2:-53412675 | None:intergenic |
| ATGTCTAGGTTGGGCAAGCT+TGG | 0.477646 | 6_2:+53410591 | Msa0920090:CDS |
| TCAATTCTTCCATAACATAA+CGG | 0.478086 | 6_2:-53412682 | None:intergenic |
| ATCGTGAAACTATCGCTGTT+TGG | 0.481179 | 6_2:+53410646 | Msa0920090:CDS |
| TTCGGGTACAGGGGCGACGA+GGG | 0.482243 | 6_2:+53410802 | Msa0920090:intron |
| ATTTGATTCTGCAAGCGGTT+CGG | 0.484114 | 6_2:-53411728 | None:intergenic |
| CATAGCACTGGCGACGTCTC+CGG | 0.488865 | 6_2:-53411800 | None:intergenic |
| ACGAGATCCAAGAATGAAGA+AGG | 0.491481 | 6_2:-53412392 | None:intergenic |
| CGCTCCCGTGGTTCGCGAGA+AGG | 0.491514 | 6_2:+53411541 | Msa0920090:CDS |
| GAAGGAACCGGACGTTTGAC+GGG | 0.491566 | 6_2:+53411452 | Msa0920090:CDS |
| GTTCTTATCTTATTAGGTCA+GGG | 0.492901 | 6_2:+53410683 | Msa0920090:CDS |
| GGAGACGTCGCCAGTGCTAT+GGG | 0.494644 | 6_2:+53411802 | Msa0920090:CDS |
| CGGTTCTTCCTTCTAATGAC+CGG | 0.495639 | 6_2:+53412531 | Msa0920090:CDS |
| CGGCCCGCCCCTGACCTGCT+GGG | 0.503431 | 6_2:-53410845 | None:intergenic |
| CCCTGACCTGCTGGGTTGGG+TGG | 0.503620 | 6_2:-53410837 | None:intergenic |
| TTTCTCCCAGATGAAGCAGC+AGG | 0.504436 | 6_2:+53412569 | Msa0920090:CDS |
| GATCCCGACCAGCAACTTGT+TGG | 0.504796 | 6_2:-53410626 | None:intergenic |
| ATGCGCCGCTTTACCCTGAA+AGG | 0.505428 | 6_2:+53411488 | Msa0920090:CDS |
| CTTATTAGGTCAGGGGCGGC+CGG | 0.508590 | 6_2:+53410691 | Msa0920090:CDS |
| GAAGGATACCGCCGAAAAGA+AGG | 0.509714 | 6_2:+53411888 | Msa0920090:CDS |
| CCTGCCTACAAGTAGGCTTA+GGG | 0.510040 | 6_2:-53410555 | None:intergenic |
| ATAATTAGCTTTGCTCCTCT+GGG | 0.514080 | 6_2:+53411511 | Msa0920090:CDS |
| GTAACGAGGGAGAGATAGAA+TGG | 0.514633 | 6_2:-53411350 | None:intergenic |
| CATCATGCCAGGAAGTTGGT+GGG | 0.515024 | 6_2:+53412260 | Msa0920090:CDS |
| TTAACCGTGGGCATCATGCC+AGG | 0.515384 | 6_2:+53412249 | Msa0920090:CDS |
| GACAGGAGCGCTAGTGGACA+CGG | 0.516431 | 6_2:+53412080 | Msa0920090:CDS |
| AGCGCTAGTGGACACGGGGA+GGG | 0.518742 | 6_2:+53412086 | Msa0920090:CDS |
| GCGGTATCCTTCCGCATTGG+CGG | 0.518979 | 6_2:-53411877 | None:intergenic |
| CGATGCCTGCTGCTTCATCT+GGG | 0.520022 | 6_2:-53412574 | None:intergenic |
| TCGGCGGTATCCTTCCGCAT+TGG | 0.524282 | 6_2:-53411880 | None:intergenic |
| CAATCCGGACCGTATTGAAA+AGG | 0.524527 | 6_2:-53412454 | None:intergenic |
| ACTACCCTAAGCCTACTTGT+AGG | 0.525883 | 6_2:+53410551 | Msa0920090:CDS |
| ATAAAAGAAAGGTGCATTAG+CGG | 0.526142 | 6_2:-53411152 | None:intergenic |
| ACCCGGCCACCCAACCCAGC+AGG | 0.526764 | 6_2:+53410831 | Msa0920090:CDS |
| CCCTAAGCCTACTTGTAGGC+AGG | 0.527063 | 6_2:+53410555 | Msa0920090:CDS |
| CCTGAGATTTGATAAAAGAA+AGG | 0.530266 | 6_2:-53411163 | None:intergenic |
| GAAAAGAATCATAGATATGC+CGG | 0.530772 | 6_2:-53412550 | None:intergenic |
| TGGGCATCATGCCAGGAAGT+TGG | 0.537377 | 6_2:+53412256 | Msa0920090:CDS |
| CATCCTCCTTGCATTTATGC+CGG | 0.540022 | 6_2:+53411781 | Msa0920090:CDS |
| AGAAGAATGCACCAAAATGC+AGG | 0.540962 | 6_2:-53411067 | None:intergenic |
| ATCTGTAGCAAAACTATGAA+CGG | 0.543422 | 6_2:-53412484 | None:intergenic |
| TTGCTACGCAACAAGAGAGC+TGG | 0.543804 | 6_2:-53412003 | None:intergenic |
| GGGCTCATCATGAATTAGGT+CGG | 0.544072 | 6_2:+53412280 | Msa0920090:CDS |
| GTCGACCCCGGTAACAAAGA+AGG | 0.544742 | 6_2:-53411249 | None:intergenic |
| AATTAGGTCGGGGTGGCTGG+TGG | 0.546250 | 6_2:+53412292 | Msa0920090:CDS |
| TCCTGTCCAGAGCGAAGAGA+AGG | 0.552588 | 6_2:-53412064 | None:intergenic |
| CCAGATGAAGCAGCAGGCAT+CGG | 0.554431 | 6_2:+53412575 | Msa0920090:CDS |
| TTTATCAAATCTCAGGGACA+TGG | 0.554985 | 6_2:+53411170 | Msa0920090:CDS |
| GCTCTGGACAGGAGCGCTAG+TGG | 0.556483 | 6_2:+53412074 | Msa0920090:CDS |
| TTCTTATCTTATTAGGTCAG+GGG | 0.560541 | 6_2:+53410684 | Msa0920090:CDS |
| CGAGATCCAAGAATGAAGAA+GGG | 0.560989 | 6_2:-53412391 | None:intergenic |
| TTTCGGGTACAGGGGCGACG+AGG | 0.562214 | 6_2:+53410801 | Msa0920090:intron |
| TAATCCAAAGCCCATAGCAC+TGG | 0.562650 | 6_2:-53411812 | None:intergenic |
| ATGAACGGAAGCTAGCAATC+CGG | 0.563440 | 6_2:-53412469 | None:intergenic |
| ATAAGTTATTAGGAATATGA+CGG | 0.567260 | 6_2:-53411111 | None:intergenic |
| CCACTCGCCGCCAATGCGGA+AGG | 0.567687 | 6_2:+53411870 | Msa0920090:CDS |
| TATGGCTTTGGGGTCGACCC+CGG | 0.571454 | 6_2:-53411261 | None:intergenic |
| GTTGCGCGCGAGCCGAGTGA+CGG | 0.572249 | 6_2:-53412653 | None:intergenic |
| ACAGGATTTGATTCTGCAAG+CGG | 0.575878 | 6_2:-53411733 | None:intergenic |
| ACCAGCAACTTGTTGGGAGT+AGG | 0.576449 | 6_2:-53410619 | None:intergenic |
| TCTTGTGCACCTCCGTCACT+CGG | 0.577639 | 6_2:+53412641 | Msa0920090:CDS |
| GACTTTCAGTTACAATGTCT+AGG | 0.582684 | 6_2:+53410577 | Msa0920090:CDS |
| ATAGCTGATATAGGATCTTG+TGG | 0.583215 | 6_2:-53411757 | None:intergenic |
| ATTCTGAACTTCGTTCGCGA+AGG | 0.584571 | 6_2:+53411434 | Msa0920090:CDS |
| CAGCAACTTGTTGGGAGTAG+GGG | 0.585937 | 6_2:-53410617 | None:intergenic |
| GGACTATAACCATACTTCCA+TGG | 0.586687 | 6_2:-53410460 | None:intergenic |
| AAGGATACCGCCGAAAAGAA+GGG | 0.588463 | 6_2:+53411889 | Msa0920090:CDS |
| TCGGAACTCGCTGATAGGAA+AGG | 0.588518 | 6_2:-53411676 | None:intergenic |
| CAGGAGCGCTAGTGGACACG+GGG | 0.593645 | 6_2:+53412082 | Msa0920090:CDS |
| TTTGAGACATTATGGCTTTG+GGG | 0.595725 | 6_2:-53411271 | None:intergenic |
| ACTCCCAACAAGTTGCTGGT+CGG | 0.595966 | 6_2:+53410622 | Msa0920090:CDS |
| GAAATTTCGAACAAAAGGAT+CGG | 0.598541 | 6_2:-53411695 | None:intergenic |
| AGGGACATGGTCTAATCATG+AGG | 0.602618 | 6_2:+53411183 | Msa0920090:CDS |
| GAATTTGGATCTTGACATGT+CGG | 0.603473 | 6_2:+53412220 | Msa0920090:CDS |
| ACAGGAGCGCTAGTGGACAC+GGG | 0.603830 | 6_2:+53412081 | Msa0920090:CDS |
| CCAACAAAGAGGCGAAGTAG+TGG | 0.607682 | 6_2:-53412148 | None:intergenic |
| TTTGGATCTTGACATGTCGG+TGG | 0.608522 | 6_2:+53412223 | Msa0920090:CDS |
| TGAAAGTCCTGCCTACAAGT+AGG | 0.610851 | 6_2:-53410562 | None:intergenic |
| GCAGGTGCTGCACCAAACGC+AGG | 0.617602 | 6_2:-53411049 | None:intergenic |
| ACAAGGGTTCGTAGAACGAA+GGG | 0.617664 | 6_2:-53411409 | None:intergenic |
| ACTTCCTGGCATGATGCCCA+CGG | 0.621123 | 6_2:-53412253 | None:intergenic |
| ATTATCCTTTCAGGGTAAAG+CGG | 0.621133 | 6_2:-53411493 | None:intergenic |
| TATCGTGCCAGATGCAACAA+AGG | 0.621147 | 6_2:-53411580 | None:intergenic |
| AAGGTTCCTGAGACACAGCA+TGG | 0.623067 | 6_2:-53412435 | None:intergenic |
| AACAAGGGTTCGTAGAACGA+AGG | 0.623600 | 6_2:-53411410 | None:intergenic |
| GTGAATGCAACGAAAAGACC+CGG | 0.624344 | 6_2:-53411007 | None:intergenic |
| CACTCCACTCGCCGCCAATG+CGG | 0.627529 | 6_2:+53411866 | Msa0920090:CDS |
| TTATCTTATTAGGTCAGGGG+CGG | 0.629120 | 6_2:+53410687 | Msa0920090:CDS |
| ACGTCTCCGGCATAAATGCA+AGG | 0.629887 | 6_2:-53411787 | None:intergenic |
| AACGAAGTTCAGAATCAACA+AGG | 0.630162 | 6_2:-53411426 | None:intergenic |
| GGATTCCTTCTTTGTTACCG+GGG | 0.633186 | 6_2:+53411244 | Msa0920090:CDS |
| AGATACCACTGTGTTCGCGC+CGG | 0.633842 | 6_2:-53412175 | None:intergenic |
| TACGGAATGAATACGAGCTG+TGG | 0.638115 | 6_2:-53412361 | None:intergenic |
| CGAGCTGTGGCTAATACCCA+AGG | 0.640332 | 6_2:-53412348 | None:intergenic |
| GAACACAGTGGTATCTGACC+AGG | 0.641077 | 6_2:+53412182 | Msa0920090:CDS |
| GAGATCCAAGAATGAAGAAG+GGG | 0.643735 | 6_2:-53412390 | None:intergenic |
| GCTCATCATGAATTAGGTCG+GGG | 0.644140 | 6_2:+53412282 | Msa0920090:CDS |
| GCGCCGGCGCTCCAACAAAG+AGG | 0.654234 | 6_2:-53412159 | None:intergenic |
| AACGAAGGGAGTGTACAACT+GGG | 0.655686 | 6_2:-53411395 | None:intergenic |
| GGGACATGGTCTAATCATGA+GGG | 0.660826 | 6_2:+53411184 | Msa0920090:CDS |
| CATCATGAATTAGGTCGGGG+TGG | 0.661572 | 6_2:+53412285 | Msa0920090:CDS |
| AATTCTTCCATAACATAACG+GGG | 0.685111 | 6_2:-53412680 | None:intergenic |
| GGTGCTGCACCAAACGCAGG+TGG | 0.686703 | 6_2:-53411046 | None:intergenic |
| CGGGAGCGCCTAGCACCCAG+AGG | 0.692237 | 6_2:-53411526 | None:intergenic |
| CATAATGTCTCAAAACGAGG+AGG | 0.712119 | 6_2:+53411280 | Msa0920090:CDS |
| AGCCATAATGTCTCAAAACG+AGG | 0.718883 | 6_2:+53411277 | Msa0920090:CDS |
| TATGACGGAACGAAAGACCG+AGG | 0.727157 | 6_2:-53411096 | None:intergenic |
| TCTTCCATAACATAACGGGG+CGG | 0.741774 | 6_2:-53412677 | None:intergenic |
| ACGAAGTTCAGAATCAACAA+GGG | 0.742453 | 6_2:-53411425 | None:intergenic |
| ACGAAGGGAGTGTACAACTG+GGG | 0.743811 | 6_2:-53411394 | None:intergenic |
| CTTCGTCTATCGATGAACAG+CGG | 0.757952 | 6_2:+53411617 | Msa0920090:CDS |
| TTTGCTACAGATGATACACG+AGG | 0.759909 | 6_2:+53412495 | Msa0920090:CDS |
| TCTCCGGCATAAATGCAAGG+AGG | 0.763982 | 6_2:-53411784 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAGTTCTTATCTTATT+AGG | + | chr6_2:53410677-53410696 | Msa0920090:CDS | 15.0% |
| !! | TTGTAATTTGATAAGTTATT+AGG | - | chr6_2:53411124-53411143 | None:intergenic | 15.0% |
| !!! | TCTCTTTTTTATAAGTTATA+CGG | - | chr6_2:53412602-53412621 | None:intergenic | 15.0% |
| !! | TATAACTTATAAAAAAGAGA+TGG | + | chr6_2:53412602-53412621 | Msa0920090:CDS | 15.0% |
| !! | ATAATAGTTCTTATCTTATT+AGG | + | chr6_2:53410677-53410696 | Msa0920090:CDS | 15.0% |
| !! | TTGTAATTTGATAAGTTATT+AGG | - | chr6_2:53411124-53411143 | None:intergenic | 15.0% |
| !!! | TCTCTTTTTTATAAGTTATA+CGG | - | chr6_2:53412602-53412621 | None:intergenic | 15.0% |
| !! | TATAACTTATAAAAAAGAGA+TGG | + | chr6_2:53412602-53412621 | Msa0920090:CDS | 15.0% |
| !! | ATAAGTTATTAGGAATATGA+CGG | - | chr6_2:53411114-53411133 | None:intergenic | 20.0% |
| !! | TGTAGATCAAAAATTATGAA+TGG | + | chr6_2:53411835-53411854 | Msa0920090:CDS | 20.0% |
| !! | GTAGATCAAAAATTATGAAT+GGG | + | chr6_2:53411836-53411855 | Msa0920090:CDS | 20.0% |
| !! | TACCAAAAAATTAAAACATG+TGG | + | chr6_2:53411966-53411985 | Msa0920090:CDS | 20.0% |
| !! | ATAAGTTATTAGGAATATGA+CGG | - | chr6_2:53411114-53411133 | None:intergenic | 20.0% |
| !! | TGTAGATCAAAAATTATGAA+TGG | + | chr6_2:53411835-53411854 | Msa0920090:CDS | 20.0% |
| !! | GTAGATCAAAAATTATGAAT+GGG | + | chr6_2:53411836-53411855 | Msa0920090:CDS | 20.0% |
| !! | TACCAAAAAATTAAAACATG+TGG | + | chr6_2:53411966-53411985 | Msa0920090:CDS | 20.0% |
| !! | CTTTCATTTATCGTTATTTC+CGG | + | chr6_2:53410988-53411007 | Msa0920090:CDS | 25.0% |
| !! | TTTCATTTATCGTTATTTCC+GGG | + | chr6_2:53410989-53411008 | Msa0920090:CDS | 25.0% |
| !! | CTTTCTTTTATCAAATCTCA+GGG | + | chr6_2:53411164-53411183 | Msa0920090:CDS | 25.0% |
| ! | AAAAATTATGAATGGGATTG+TGG | + | chr6_2:53411843-53411862 | Msa0920090:CDS | 25.0% |
| !!! | GACCACATGTTTTAATTTTT+TGG | - | chr6_2:53411971-53411990 | None:intergenic | 25.0% |
| !!! | ATAAAAGAAGCATTTTCTAC+GGG | - | chr6_2:53412327-53412346 | None:intergenic | 25.0% |
| !!! | CATAAAAGAAGCATTTTCTA+CGG | - | chr6_2:53412328-53412347 | None:intergenic | 25.0% |
| ! | TTATAAAAAAGAGATGGTTG+TGG | + | chr6_2:53412608-53412627 | Msa0920090:CDS | 25.0% |
| ! | TATAAAAAAGAGATGGTTGT+GGG | + | chr6_2:53412609-53412628 | Msa0920090:CDS | 25.0% |
| ! | TCAATTCTTCCATAACATAA+CGG | - | chr6_2:53412685-53412704 | None:intergenic | 25.0% |
| !! | CTTTCATTTATCGTTATTTC+CGG | + | chr6_2:53410988-53411007 | Msa0920090:CDS | 25.0% |
| !! | TTTCATTTATCGTTATTTCC+GGG | + | chr6_2:53410989-53411008 | Msa0920090:CDS | 25.0% |
| !! | CTTTCTTTTATCAAATCTCA+GGG | + | chr6_2:53411164-53411183 | Msa0920090:CDS | 25.0% |
| ! | AAAAATTATGAATGGGATTG+TGG | + | chr6_2:53411843-53411862 | Msa0920090:CDS | 25.0% |
| !!! | GACCACATGTTTTAATTTTT+TGG | - | chr6_2:53411971-53411990 | None:intergenic | 25.0% |
| !!! | ATAAAAGAAGCATTTTCTAC+GGG | - | chr6_2:53412327-53412346 | None:intergenic | 25.0% |
| !!! | CATAAAAGAAGCATTTTCTA+CGG | - | chr6_2:53412328-53412347 | None:intergenic | 25.0% |
| ! | TTATAAAAAAGAGATGGTTG+TGG | + | chr6_2:53412608-53412627 | Msa0920090:CDS | 25.0% |
| ! | TATAAAAAAGAGATGGTTGT+GGG | + | chr6_2:53412609-53412628 | Msa0920090:CDS | 25.0% |
| ! | TCAATTCTTCCATAACATAA+CGG | - | chr6_2:53412685-53412704 | None:intergenic | 25.0% |
| AGTTCTTATCTTATTAGGTC+AGG | + | chr6_2:53410682-53410701 | Msa0920090:CDS | 30.0% | |
| GTTCTTATCTTATTAGGTCA+GGG | + | chr6_2:53410683-53410702 | Msa0920090:CDS | 30.0% | |
| TTCTTATCTTATTAGGTCAG+GGG | + | chr6_2:53410684-53410703 | Msa0920090:CDS | 30.0% | |
| ! | ATAAAAGAAAGGTGCATTAG+CGG | - | chr6_2:53411155-53411174 | None:intergenic | 30.0% |
| CCTGAGATTTGATAAAAGAA+AGG | - | chr6_2:53411166-53411185 | None:intergenic | 30.0% | |
| ! | CCTTTCTTTTATCAAATCTC+AGG | + | chr6_2:53411163-53411182 | Msa0920090:CDS | 30.0% |
| ! | ATGAGGGTAGTATTTTATCA+TGG | + | chr6_2:53411200-53411219 | Msa0920090:CDS | 30.0% |
| ! | GTAGTATTTTATCATGGTGT+CGG | + | chr6_2:53411206-53411225 | Msa0920090:CDS | 30.0% |
| !!! | TTTTGAGACATTATGGCTTT+GGG | - | chr6_2:53411275-53411294 | None:intergenic | 30.0% |
| AGTCATACAAAACTTCTCTA+TGG | - | chr6_2:53411306-53411325 | None:intergenic | 30.0% | |
| CAAAGCTAATTATCCTTTCA+GGG | - | chr6_2:53411504-53411523 | None:intergenic | 30.0% | |
| GAAATTTCGAACAAAAGGAT+CGG | - | chr6_2:53411698-53411717 | None:intergenic | 30.0% | |
| ACGAAGAAATTTCGAACAAA+AGG | - | chr6_2:53411703-53411722 | None:intergenic | 30.0% | |
| TAAAAAGCTCGCATGTTATA+CGG | - | chr6_2:53411948-53411967 | None:intergenic | 30.0% | |
| ! | AAAATGCTTCTTTTATGCCT+TGG | + | chr6_2:53412331-53412350 | Msa0920090:CDS | 30.0% |
| ! | AAATGCTTCTTTTATGCCTT+GGG | + | chr6_2:53412332-53412351 | Msa0920090:CDS | 30.0% |
| ATCTGTAGCAAAACTATGAA+CGG | - | chr6_2:53412487-53412506 | None:intergenic | 30.0% | |
| ! | ATACACGAGGAATCTTTTTA+TGG | + | chr6_2:53412508-53412527 | Msa0920090:CDS | 30.0% |
| GAAAAGAATCATAGATATGC+CGG | - | chr6_2:53412553-53412572 | None:intergenic | 30.0% | |
| ATAAAAAAGAGATGGTTGTG+GGG | + | chr6_2:53412610-53412629 | Msa0920090:CDS | 30.0% | |
| AATTCTTCCATAACATAACG+GGG | - | chr6_2:53412683-53412702 | None:intergenic | 30.0% | |
| CAATTCTTCCATAACATAAC+GGG | - | chr6_2:53412684-53412703 | None:intergenic | 30.0% | |
| AGTTCTTATCTTATTAGGTC+AGG | + | chr6_2:53410682-53410701 | Msa0920090:CDS | 30.0% | |
| GTTCTTATCTTATTAGGTCA+GGG | + | chr6_2:53410683-53410702 | Msa0920090:CDS | 30.0% | |
| TTCTTATCTTATTAGGTCAG+GGG | + | chr6_2:53410684-53410703 | Msa0920090:CDS | 30.0% | |
| ! | ATAAAAGAAAGGTGCATTAG+CGG | - | chr6_2:53411155-53411174 | None:intergenic | 30.0% |
| CCTGAGATTTGATAAAAGAA+AGG | - | chr6_2:53411166-53411185 | None:intergenic | 30.0% | |
| ! | CCTTTCTTTTATCAAATCTC+AGG | + | chr6_2:53411163-53411182 | Msa0920090:CDS | 30.0% |
| ! | ATGAGGGTAGTATTTTATCA+TGG | + | chr6_2:53411200-53411219 | Msa0920090:CDS | 30.0% |
| ! | GTAGTATTTTATCATGGTGT+CGG | + | chr6_2:53411206-53411225 | Msa0920090:CDS | 30.0% |
| !!! | TTTTGAGACATTATGGCTTT+GGG | - | chr6_2:53411275-53411294 | None:intergenic | 30.0% |
| AGTCATACAAAACTTCTCTA+TGG | - | chr6_2:53411306-53411325 | None:intergenic | 30.0% | |
| CAAAGCTAATTATCCTTTCA+GGG | - | chr6_2:53411504-53411523 | None:intergenic | 30.0% | |
| GAAATTTCGAACAAAAGGAT+CGG | - | chr6_2:53411698-53411717 | None:intergenic | 30.0% | |
| ACGAAGAAATTTCGAACAAA+AGG | - | chr6_2:53411703-53411722 | None:intergenic | 30.0% | |
| TAAAAAGCTCGCATGTTATA+CGG | - | chr6_2:53411948-53411967 | None:intergenic | 30.0% | |
| ! | AAAATGCTTCTTTTATGCCT+TGG | + | chr6_2:53412331-53412350 | Msa0920090:CDS | 30.0% |
| ! | AAATGCTTCTTTTATGCCTT+GGG | + | chr6_2:53412332-53412351 | Msa0920090:CDS | 30.0% |
| ATCTGTAGCAAAACTATGAA+CGG | - | chr6_2:53412487-53412506 | None:intergenic | 30.0% | |
| ! | ATACACGAGGAATCTTTTTA+TGG | + | chr6_2:53412508-53412527 | Msa0920090:CDS | 30.0% |
| GAAAAGAATCATAGATATGC+CGG | - | chr6_2:53412553-53412572 | None:intergenic | 30.0% | |
| ATAAAAAAGAGATGGTTGTG+GGG | + | chr6_2:53412610-53412629 | Msa0920090:CDS | 30.0% | |
| AATTCTTCCATAACATAACG+GGG | - | chr6_2:53412683-53412702 | None:intergenic | 30.0% | |
| CAATTCTTCCATAACATAAC+GGG | - | chr6_2:53412684-53412703 | None:intergenic | 30.0% | |
| TTATAGTCCCATTCCATTAG+TGG | + | chr6_2:53410474-53410493 | Msa0920090:intron | 35.0% | |
| TATAGTCCCATTCCATTAGT+GGG | + | chr6_2:53410475-53410494 | Msa0920090:intron | 35.0% | |
| ! | CGAAAACCTTCTTCTTTTAC+TGG | - | chr6_2:53410528-53410547 | None:intergenic | 35.0% |
| ! | GTAAAAGAAGAAGGTTTTCG+AGG | + | chr6_2:53410528-53410547 | Msa0920090:intron | 35.0% |
| GACTTTCAGTTACAATGTCT+AGG | + | chr6_2:53410577-53410596 | Msa0920090:CDS | 35.0% | |
| TTCAGTTACAATGTCTAGGT+TGG | + | chr6_2:53410581-53410600 | Msa0920090:CDS | 35.0% | |
| TCAGTTACAATGTCTAGGTT+GGG | + | chr6_2:53410582-53410601 | Msa0920090:CDS | 35.0% | |
| TGCATTCTTCTTACTTTCCT+CGG | + | chr6_2:53411079-53411098 | Msa0920090:CDS | 35.0% | |
| TTTATCAAATCTCAGGGACA+TGG | + | chr6_2:53411170-53411189 | Msa0920090:CDS | 35.0% | |
| GAAGGAATCCATAAAAACGT+GGG | - | chr6_2:53411234-53411253 | None:intergenic | 35.0% | |
| AGAAGGAATCCATAAAAACG+TGG | - | chr6_2:53411235-53411254 | None:intergenic | 35.0% | |
| ATGGATTCCTTCTTTGTTAC+CGG | + | chr6_2:53411242-53411261 | Msa0920090:CDS | 35.0% | |
| ! | TTTGAGACATTATGGCTTTG+GGG | - | chr6_2:53411274-53411293 | None:intergenic | 35.0% |
| !!! | GTTTTGAGACATTATGGCTT+TGG | - | chr6_2:53411276-53411295 | None:intergenic | 35.0% |
| !!! | CACTTTTTTGTTCGTAACGA+GGG | - | chr6_2:53411366-53411385 | None:intergenic | 35.0% |
| CTCGTTACGAACAAAAAAGT+GGG | + | chr6_2:53411365-53411384 | Msa0920090:CDS | 35.0% | |
| TCGTTACGAACAAAAAAGTG+GGG | + | chr6_2:53411366-53411385 | Msa0920090:CDS | 35.0% | |
| ACGAAGTTCAGAATCAACAA+GGG | - | chr6_2:53411428-53411447 | None:intergenic | 35.0% | |
| AACGAAGTTCAGAATCAACA+AGG | - | chr6_2:53411429-53411448 | None:intergenic | 35.0% | |
| ATTATCCTTTCAGGGTAAAG+CGG | - | chr6_2:53411496-53411515 | None:intergenic | 35.0% | |
| GCAAAGCTAATTATCCTTTC+AGG | - | chr6_2:53411505-53411524 | None:intergenic | 35.0% | |
| !! | ATAATTAGCTTTGCTCCTCT+GGG | + | chr6_2:53411511-53411530 | Msa0920090:CDS | 35.0% |
| ATAGCTGATATAGGATCTTG+TGG | - | chr6_2:53411760-53411779 | None:intergenic | 35.0% | |
| AAAAAGCTCGCATGTTATAC+GGG | - | chr6_2:53411947-53411966 | None:intergenic | 35.0% | |
| ACCAGAAACAGAATCGAATT+TGG | + | chr6_2:53412205-53412224 | Msa0920090:CDS | 35.0% | |
| TCCAAATTCGATTCTGTTTC+TGG | - | chr6_2:53412209-53412228 | None:intergenic | 35.0% | |
| GAATTTGGATCTTGACATGT+CGG | + | chr6_2:53412220-53412239 | Msa0920090:CDS | 35.0% | |
| ATGAAGAAGGGGTAGAATTA+CGG | - | chr6_2:53412382-53412401 | None:intergenic | 35.0% | |
| ! | TCTCAGGAACCTTTTCAATA+CGG | + | chr6_2:53412445-53412464 | Msa0920090:CDS | 35.0% |
| TTATAGTCCCATTCCATTAG+TGG | + | chr6_2:53410474-53410493 | Msa0920090:intron | 35.0% | |
| TATAGTCCCATTCCATTAGT+GGG | + | chr6_2:53410475-53410494 | Msa0920090:intron | 35.0% | |
| ! | CGAAAACCTTCTTCTTTTAC+TGG | - | chr6_2:53410528-53410547 | None:intergenic | 35.0% |
| ! | GTAAAAGAAGAAGGTTTTCG+AGG | + | chr6_2:53410528-53410547 | Msa0920090:intron | 35.0% |
| GACTTTCAGTTACAATGTCT+AGG | + | chr6_2:53410577-53410596 | Msa0920090:CDS | 35.0% | |
| TTCAGTTACAATGTCTAGGT+TGG | + | chr6_2:53410581-53410600 | Msa0920090:CDS | 35.0% | |
| TCAGTTACAATGTCTAGGTT+GGG | + | chr6_2:53410582-53410601 | Msa0920090:CDS | 35.0% | |
| TGCATTCTTCTTACTTTCCT+CGG | + | chr6_2:53411079-53411098 | Msa0920090:CDS | 35.0% | |
| TTTATCAAATCTCAGGGACA+TGG | + | chr6_2:53411170-53411189 | Msa0920090:CDS | 35.0% | |
| GAAGGAATCCATAAAAACGT+GGG | - | chr6_2:53411234-53411253 | None:intergenic | 35.0% | |
| AGAAGGAATCCATAAAAACG+TGG | - | chr6_2:53411235-53411254 | None:intergenic | 35.0% | |
| ATGGATTCCTTCTTTGTTAC+CGG | + | chr6_2:53411242-53411261 | Msa0920090:CDS | 35.0% | |
| ! | TTTGAGACATTATGGCTTTG+GGG | - | chr6_2:53411274-53411293 | None:intergenic | 35.0% |
| !!! | GTTTTGAGACATTATGGCTT+TGG | - | chr6_2:53411276-53411295 | None:intergenic | 35.0% |
| !!! | CACTTTTTTGTTCGTAACGA+GGG | - | chr6_2:53411366-53411385 | None:intergenic | 35.0% |
| CTCGTTACGAACAAAAAAGT+GGG | + | chr6_2:53411365-53411384 | Msa0920090:CDS | 35.0% | |
| TCGTTACGAACAAAAAAGTG+GGG | + | chr6_2:53411366-53411385 | Msa0920090:CDS | 35.0% | |
| ACGAAGTTCAGAATCAACAA+GGG | - | chr6_2:53411428-53411447 | None:intergenic | 35.0% | |
| AACGAAGTTCAGAATCAACA+AGG | - | chr6_2:53411429-53411448 | None:intergenic | 35.0% | |
| ATTATCCTTTCAGGGTAAAG+CGG | - | chr6_2:53411496-53411515 | None:intergenic | 35.0% | |
| GCAAAGCTAATTATCCTTTC+AGG | - | chr6_2:53411505-53411524 | None:intergenic | 35.0% | |
| !! | ATAATTAGCTTTGCTCCTCT+GGG | + | chr6_2:53411511-53411530 | Msa0920090:CDS | 35.0% |
| ATAGCTGATATAGGATCTTG+TGG | - | chr6_2:53411760-53411779 | None:intergenic | 35.0% | |
| AAAAAGCTCGCATGTTATAC+GGG | - | chr6_2:53411947-53411966 | None:intergenic | 35.0% | |
| ACCAGAAACAGAATCGAATT+TGG | + | chr6_2:53412205-53412224 | Msa0920090:CDS | 35.0% | |
| TCCAAATTCGATTCTGTTTC+TGG | - | chr6_2:53412209-53412228 | None:intergenic | 35.0% | |
| GAATTTGGATCTTGACATGT+CGG | + | chr6_2:53412220-53412239 | Msa0920090:CDS | 35.0% | |
| ATGAAGAAGGGGTAGAATTA+CGG | - | chr6_2:53412382-53412401 | None:intergenic | 35.0% | |
| ! | TCTCAGGAACCTTTTCAATA+CGG | + | chr6_2:53412445-53412464 | Msa0920090:CDS | 35.0% |
| ATGGATCCCACTAATGGAAT+GGG | - | chr6_2:53410484-53410503 | None:intergenic | 40.0% | |
| TATGGATCCCACTAATGGAA+TGG | - | chr6_2:53410485-53410504 | None:intergenic | 40.0% | |
| !!! | CCTTCTTCTTTTACTGGCTT+GGG | - | chr6_2:53410522-53410541 | None:intergenic | 40.0% |
| !! | ACCTTCTTCTTTTACTGGCT+TGG | - | chr6_2:53410523-53410542 | None:intergenic | 40.0% |
| ATCGTGAAACTATCGCTGTT+TGG | + | chr6_2:53410646-53410665 | Msa0920090:CDS | 40.0% | |
| ACTATCGCTGTTTGGTCATA+AGG | + | chr6_2:53410654-53410673 | Msa0920090:CDS | 40.0% | |
| TTATCTTATTAGGTCAGGGG+CGG | + | chr6_2:53410687-53410706 | Msa0920090:CDS | 40.0% | |
| !! | GCTTTGTTATTCCCATCATC+CGG | - | chr6_2:53410920-53410939 | None:intergenic | 40.0% |
| AGAAGAATGCACCAAAATGC+AGG | - | chr6_2:53411070-53411089 | None:intergenic | 40.0% | |
| TGGATTCCTTCTTTGTTACC+GGG | + | chr6_2:53411243-53411262 | Msa0920090:CDS | 40.0% | |
| AGCCATAATGTCTCAAAACG+AGG | + | chr6_2:53411277-53411296 | Msa0920090:CDS | 40.0% | |
| !!! | CTCCTCGTTTTGAGACATTA+TGG | - | chr6_2:53411282-53411301 | None:intergenic | 40.0% |
| CATAATGTCTCAAAACGAGG+AGG | + | chr6_2:53411280-53411299 | Msa0920090:CDS | 40.0% | |
| !!! | CCACTTTTTTGTTCGTAACG+AGG | - | chr6_2:53411367-53411386 | None:intergenic | 40.0% |
| CCTCGTTACGAACAAAAAAG+TGG | + | chr6_2:53411364-53411383 | Msa0920090:CDS | 40.0% | |
| GTAAAGCGGCGCATAAAAAA+GGG | - | chr6_2:53411482-53411501 | None:intergenic | 40.0% | |
| !! | GATAATTAGCTTTGCTCCTC+TGG | + | chr6_2:53411510-53411529 | Msa0920090:CDS | 40.0% |
| ATTTGATTCTGCAAGCGGTT+CGG | - | chr6_2:53411731-53411750 | None:intergenic | 40.0% | |
| ACAGGATTTGATTCTGCAAG+CGG | - | chr6_2:53411736-53411755 | None:intergenic | 40.0% | |
| GATATAGGATCTTGTGGAAC+AGG | - | chr6_2:53411754-53411773 | None:intergenic | 40.0% | |
| GGAGGATGTATAGCTGATAT+AGG | - | chr6_2:53411769-53411788 | None:intergenic | 40.0% | |
| TTCTACCCCTTCTTCATTCT+TGG | + | chr6_2:53412385-53412404 | Msa0920090:CDS | 40.0% | |
| GAGATCCAAGAATGAAGAAG+GGG | - | chr6_2:53412393-53412412 | None:intergenic | 40.0% | |
| CGAGATCCAAGAATGAAGAA+GGG | - | chr6_2:53412394-53412413 | None:intergenic | 40.0% | |
| ACGAGATCCAAGAATGAAGA+AGG | - | chr6_2:53412395-53412414 | None:intergenic | 40.0% | |
| TTTGCTACAGATGATACACG+AGG | + | chr6_2:53412495-53412514 | Msa0920090:CDS | 40.0% | |
| ! | CACGAGGAATCTTTTTATGG+CGG | + | chr6_2:53412511-53412530 | Msa0920090:CDS | 40.0% |
| TAGATATGCCGGTCATTAGA+AGG | - | chr6_2:53412542-53412561 | None:intergenic | 40.0% | |
| ATGGATCCCACTAATGGAAT+GGG | - | chr6_2:53410484-53410503 | None:intergenic | 40.0% | |
| TATGGATCCCACTAATGGAA+TGG | - | chr6_2:53410485-53410504 | None:intergenic | 40.0% | |
| !!! | CCTTCTTCTTTTACTGGCTT+GGG | - | chr6_2:53410522-53410541 | None:intergenic | 40.0% |
| !! | ACCTTCTTCTTTTACTGGCT+TGG | - | chr6_2:53410523-53410542 | None:intergenic | 40.0% |
| ATCGTGAAACTATCGCTGTT+TGG | + | chr6_2:53410646-53410665 | Msa0920090:CDS | 40.0% | |
| ACTATCGCTGTTTGGTCATA+AGG | + | chr6_2:53410654-53410673 | Msa0920090:CDS | 40.0% | |
| TTATCTTATTAGGTCAGGGG+CGG | + | chr6_2:53410687-53410706 | Msa0920090:CDS | 40.0% | |
| !! | GCTTTGTTATTCCCATCATC+CGG | - | chr6_2:53410920-53410939 | None:intergenic | 40.0% |
| AGAAGAATGCACCAAAATGC+AGG | - | chr6_2:53411070-53411089 | None:intergenic | 40.0% | |
| TGGATTCCTTCTTTGTTACC+GGG | + | chr6_2:53411243-53411262 | Msa0920090:CDS | 40.0% | |
| AGCCATAATGTCTCAAAACG+AGG | + | chr6_2:53411277-53411296 | Msa0920090:CDS | 40.0% | |
| !!! | CTCCTCGTTTTGAGACATTA+TGG | - | chr6_2:53411282-53411301 | None:intergenic | 40.0% |
| CATAATGTCTCAAAACGAGG+AGG | + | chr6_2:53411280-53411299 | Msa0920090:CDS | 40.0% | |
| !!! | CCACTTTTTTGTTCGTAACG+AGG | - | chr6_2:53411367-53411386 | None:intergenic | 40.0% |
| CCTCGTTACGAACAAAAAAG+TGG | + | chr6_2:53411364-53411383 | Msa0920090:CDS | 40.0% | |
| GTAAAGCGGCGCATAAAAAA+GGG | - | chr6_2:53411482-53411501 | None:intergenic | 40.0% | |
| !! | GATAATTAGCTTTGCTCCTC+TGG | + | chr6_2:53411510-53411529 | Msa0920090:CDS | 40.0% |
| ATTTGATTCTGCAAGCGGTT+CGG | - | chr6_2:53411731-53411750 | None:intergenic | 40.0% | |
| ACAGGATTTGATTCTGCAAG+CGG | - | chr6_2:53411736-53411755 | None:intergenic | 40.0% | |
| GATATAGGATCTTGTGGAAC+AGG | - | chr6_2:53411754-53411773 | None:intergenic | 40.0% | |
| GGAGGATGTATAGCTGATAT+AGG | - | chr6_2:53411769-53411788 | None:intergenic | 40.0% | |
| TTCTACCCCTTCTTCATTCT+TGG | + | chr6_2:53412385-53412404 | Msa0920090:CDS | 40.0% | |
| GAGATCCAAGAATGAAGAAG+GGG | - | chr6_2:53412393-53412412 | None:intergenic | 40.0% | |
| CGAGATCCAAGAATGAAGAA+GGG | - | chr6_2:53412394-53412413 | None:intergenic | 40.0% | |
| ACGAGATCCAAGAATGAAGA+AGG | - | chr6_2:53412395-53412414 | None:intergenic | 40.0% | |
| TTTGCTACAGATGATACACG+AGG | + | chr6_2:53412495-53412514 | Msa0920090:CDS | 40.0% | |
| ! | CACGAGGAATCTTTTTATGG+CGG | + | chr6_2:53412511-53412530 | Msa0920090:CDS | 40.0% |
| TAGATATGCCGGTCATTAGA+AGG | - | chr6_2:53412542-53412561 | None:intergenic | 40.0% | |
| TAGGCTATGGATCCCACTAA+TGG | - | chr6_2:53410490-53410509 | None:intergenic | 45.0% | |
| TTAGTGGGATCCATAGCCTA+CGG | + | chr6_2:53410490-53410509 | Msa0920090:intron | 45.0% | |
| CCCAAGCCAGTAAAAGAAGA+AGG | + | chr6_2:53410519-53410538 | Msa0920090:intron | 45.0% | |
| ACTACCCTAAGCCTACTTGT+AGG | + | chr6_2:53410551-53410570 | Msa0920090:CDS | 45.0% | |
| TGAAAGTCCTGCCTACAAGT+AGG | - | chr6_2:53410565-53410584 | None:intergenic | 45.0% | |
| GTTATGCCATTACCAATCGC+GGG | - | chr6_2:53410728-53410747 | None:intergenic | 45.0% | |
| GGTTATGCCATTACCAATCG+CGG | - | chr6_2:53410729-53410748 | None:intergenic | 45.0% | |
| ! | GGTAATGGCATAACCAGAAG+AGG | + | chr6_2:53410734-53410753 | Msa0920090:intron | 45.0% |
| GCATAACCAGAAGAGGAGTA+GGG | + | chr6_2:53410741-53410760 | Msa0920090:intron | 45.0% | |
| CATAACCAGAAGAGGAGTAG+GGG | + | chr6_2:53410742-53410761 | Msa0920090:intron | 45.0% | |
| AAATCCTGCCACCTTTCTTG+TGG | + | chr6_2:53410879-53410898 | Msa0920090:intron | 45.0% | |
| AGGATGATCCACAAGAAAGG+TGG | - | chr6_2:53410890-53410909 | None:intergenic | 45.0% | |
| CACAGGATGATCCACAAGAA+AGG | - | chr6_2:53410893-53410912 | None:intergenic | 45.0% | |
| CTTTCTTGTGGATCATCCTG+TGG | + | chr6_2:53410891-53410910 | Msa0920090:intron | 45.0% | |
| GTGAATGCAACGAAAAGACC+CGG | - | chr6_2:53411010-53411029 | None:intergenic | 45.0% | |
| AAGAAACAACCACCTGCGTT+TGG | + | chr6_2:53411037-53411056 | Msa0920090:CDS | 45.0% | |
| AGGGACATGGTCTAATCATG+AGG | + | chr6_2:53411183-53411202 | Msa0920090:CDS | 45.0% | |
| GGGACATGGTCTAATCATGA+GGG | + | chr6_2:53411184-53411203 | Msa0920090:CDS | 45.0% | |
| ! | TGTCGGATCCCACGTTTTTA+TGG | + | chr6_2:53411223-53411242 | Msa0920090:CDS | 45.0% |
| GGATTCCTTCTTTGTTACCG+GGG | + | chr6_2:53411244-53411263 | Msa0920090:CDS | 45.0% | |
| GTAACGAGGGAGAGATAGAA+TGG | - | chr6_2:53411353-53411372 | None:intergenic | 45.0% | |
| ! | AACGAAGGGAGTGTACAACT+GGG | - | chr6_2:53411398-53411417 | None:intergenic | 45.0% |
| ACAAGGGTTCGTAGAACGAA+GGG | - | chr6_2:53411412-53411431 | None:intergenic | 45.0% | |
| AACAAGGGTTCGTAGAACGA+AGG | - | chr6_2:53411413-53411432 | None:intergenic | 45.0% | |
| ATTCTGAACTTCGTTCGCGA+AGG | + | chr6_2:53411434-53411453 | Msa0920090:CDS | 45.0% | |
| GGTAAAGCGGCGCATAAAAA+AGG | - | chr6_2:53411483-53411502 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTCTCGCGAACCA+CGG | - | chr6_2:53411549-53411568 | None:intergenic | 45.0% |
| GTTCGCGAGAAGGAAAAAGA+AGG | + | chr6_2:53411551-53411570 | Msa0920090:CDS | 45.0% | |
| GACTCATCCTTTGTTGCATC+TGG | + | chr6_2:53411573-53411592 | Msa0920090:CDS | 45.0% | |
| TATCGTGCCAGATGCAACAA+AGG | - | chr6_2:53411583-53411602 | None:intergenic | 45.0% | |
| CTTCGTCTATCGATGAACAG+CGG | + | chr6_2:53411617-53411636 | Msa0920090:CDS | 45.0% | |
| !! | ATCGATGAACAGCGGATTGA+CGG | + | chr6_2:53411625-53411644 | Msa0920090:CDS | 45.0% |
| CATCCTCCTTGCATTTATGC+CGG | + | chr6_2:53411781-53411800 | Msa0920090:CDS | 45.0% | |
| TAATCCAAAGCCCATAGCAC+TGG | - | chr6_2:53411815-53411834 | None:intergenic | 45.0% | |
| AAGGATACCGCCGAAAAGAA+GGG | + | chr6_2:53411889-53411908 | Msa0920090:CDS | 45.0% | |
| ! | AAGCAGCGTTCCCTTCTTTT+CGG | - | chr6_2:53411902-53411921 | None:intergenic | 45.0% |
| !! | TTCGATTCTGTTTCTGGTCC+TGG | - | chr6_2:53412203-53412222 | None:intergenic | 45.0% |
| TTTGGATCTTGACATGTCGG+TGG | + | chr6_2:53412223-53412242 | Msa0920090:CDS | 45.0% | |
| ! | ATGTCGGTGGTTTTTAACCG+TGG | + | chr6_2:53412236-53412255 | Msa0920090:CDS | 45.0% |
| ! | TGTCGGTGGTTTTTAACCGT+GGG | + | chr6_2:53412237-53412256 | Msa0920090:CDS | 45.0% |
| !! | TGGTGGGCTCATCATGAATT+AGG | + | chr6_2:53412276-53412295 | Msa0920090:CDS | 45.0% |
| GGGCTCATCATGAATTAGGT+CGG | + | chr6_2:53412280-53412299 | Msa0920090:CDS | 45.0% | |
| GGCTCATCATGAATTAGGTC+GGG | + | chr6_2:53412281-53412300 | Msa0920090:CDS | 45.0% | |
| GCTCATCATGAATTAGGTCG+GGG | + | chr6_2:53412282-53412301 | Msa0920090:CDS | 45.0% | |
| TACGGAATGAATACGAGCTG+TGG | - | chr6_2:53412364-53412383 | None:intergenic | 45.0% | |
| ! | GGAACCTTTTCAATACGGTC+CGG | + | chr6_2:53412450-53412469 | Msa0920090:CDS | 45.0% |
| CAATCCGGACCGTATTGAAA+AGG | - | chr6_2:53412457-53412476 | None:intergenic | 45.0% | |
| ATGAACGGAAGCTAGCAATC+CGG | - | chr6_2:53412472-53412491 | None:intergenic | 45.0% | |
| CGGTTCTTCCTTCTAATGAC+CGG | + | chr6_2:53412531-53412550 | Msa0920090:CDS | 45.0% | |
| ! | TCTTCCATAACATAACGGGG+CGG | - | chr6_2:53412680-53412699 | None:intergenic | 45.0% |
| TAGGCTATGGATCCCACTAA+TGG | - | chr6_2:53410490-53410509 | None:intergenic | 45.0% | |
| TTAGTGGGATCCATAGCCTA+CGG | + | chr6_2:53410490-53410509 | Msa0920090:intron | 45.0% | |
| CCCAAGCCAGTAAAAGAAGA+AGG | + | chr6_2:53410519-53410538 | Msa0920090:intron | 45.0% | |
| ACTACCCTAAGCCTACTTGT+AGG | + | chr6_2:53410551-53410570 | Msa0920090:CDS | 45.0% | |
| TGAAAGTCCTGCCTACAAGT+AGG | - | chr6_2:53410565-53410584 | None:intergenic | 45.0% | |
| GTTATGCCATTACCAATCGC+GGG | - | chr6_2:53410728-53410747 | None:intergenic | 45.0% | |
| GGTTATGCCATTACCAATCG+CGG | - | chr6_2:53410729-53410748 | None:intergenic | 45.0% | |
| ! | GGTAATGGCATAACCAGAAG+AGG | + | chr6_2:53410734-53410753 | Msa0920090:intron | 45.0% |
| GCATAACCAGAAGAGGAGTA+GGG | + | chr6_2:53410741-53410760 | Msa0920090:intron | 45.0% | |
| CATAACCAGAAGAGGAGTAG+GGG | + | chr6_2:53410742-53410761 | Msa0920090:intron | 45.0% | |
| AAATCCTGCCACCTTTCTTG+TGG | + | chr6_2:53410879-53410898 | Msa0920090:intron | 45.0% | |
| AGGATGATCCACAAGAAAGG+TGG | - | chr6_2:53410890-53410909 | None:intergenic | 45.0% | |
| CACAGGATGATCCACAAGAA+AGG | - | chr6_2:53410893-53410912 | None:intergenic | 45.0% | |
| CTTTCTTGTGGATCATCCTG+TGG | + | chr6_2:53410891-53410910 | Msa0920090:intron | 45.0% | |
| GTGAATGCAACGAAAAGACC+CGG | - | chr6_2:53411010-53411029 | None:intergenic | 45.0% | |
| AAGAAACAACCACCTGCGTT+TGG | + | chr6_2:53411037-53411056 | Msa0920090:CDS | 45.0% | |
| AGGGACATGGTCTAATCATG+AGG | + | chr6_2:53411183-53411202 | Msa0920090:CDS | 45.0% | |
| GGGACATGGTCTAATCATGA+GGG | + | chr6_2:53411184-53411203 | Msa0920090:CDS | 45.0% | |
| ! | TGTCGGATCCCACGTTTTTA+TGG | + | chr6_2:53411223-53411242 | Msa0920090:CDS | 45.0% |
| GGATTCCTTCTTTGTTACCG+GGG | + | chr6_2:53411244-53411263 | Msa0920090:CDS | 45.0% | |
| GTAACGAGGGAGAGATAGAA+TGG | - | chr6_2:53411353-53411372 | None:intergenic | 45.0% | |
| ! | AACGAAGGGAGTGTACAACT+GGG | - | chr6_2:53411398-53411417 | None:intergenic | 45.0% |
| ACAAGGGTTCGTAGAACGAA+GGG | - | chr6_2:53411412-53411431 | None:intergenic | 45.0% | |
| AACAAGGGTTCGTAGAACGA+AGG | - | chr6_2:53411413-53411432 | None:intergenic | 45.0% | |
| ATTCTGAACTTCGTTCGCGA+AGG | + | chr6_2:53411434-53411453 | Msa0920090:CDS | 45.0% | |
| GGTAAAGCGGCGCATAAAAA+AGG | - | chr6_2:53411483-53411502 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTCTCGCGAACCA+CGG | - | chr6_2:53411549-53411568 | None:intergenic | 45.0% |
| GTTCGCGAGAAGGAAAAAGA+AGG | + | chr6_2:53411551-53411570 | Msa0920090:CDS | 45.0% | |
| GACTCATCCTTTGTTGCATC+TGG | + | chr6_2:53411573-53411592 | Msa0920090:CDS | 45.0% | |
| TATCGTGCCAGATGCAACAA+AGG | - | chr6_2:53411583-53411602 | None:intergenic | 45.0% | |
| CTTCGTCTATCGATGAACAG+CGG | + | chr6_2:53411617-53411636 | Msa0920090:CDS | 45.0% | |
| !! | ATCGATGAACAGCGGATTGA+CGG | + | chr6_2:53411625-53411644 | Msa0920090:CDS | 45.0% |
| CATCCTCCTTGCATTTATGC+CGG | + | chr6_2:53411781-53411800 | Msa0920090:CDS | 45.0% | |
| TAATCCAAAGCCCATAGCAC+TGG | - | chr6_2:53411815-53411834 | None:intergenic | 45.0% | |
| AAGGATACCGCCGAAAAGAA+GGG | + | chr6_2:53411889-53411908 | Msa0920090:CDS | 45.0% | |
| ! | AAGCAGCGTTCCCTTCTTTT+CGG | - | chr6_2:53411902-53411921 | None:intergenic | 45.0% |
| !! | TTCGATTCTGTTTCTGGTCC+TGG | - | chr6_2:53412203-53412222 | None:intergenic | 45.0% |
| TTTGGATCTTGACATGTCGG+TGG | + | chr6_2:53412223-53412242 | Msa0920090:CDS | 45.0% | |
| ! | ATGTCGGTGGTTTTTAACCG+TGG | + | chr6_2:53412236-53412255 | Msa0920090:CDS | 45.0% |
| ! | TGTCGGTGGTTTTTAACCGT+GGG | + | chr6_2:53412237-53412256 | Msa0920090:CDS | 45.0% |
| !! | TGGTGGGCTCATCATGAATT+AGG | + | chr6_2:53412276-53412295 | Msa0920090:CDS | 45.0% |
| GGGCTCATCATGAATTAGGT+CGG | + | chr6_2:53412280-53412299 | Msa0920090:CDS | 45.0% | |
| GGCTCATCATGAATTAGGTC+GGG | + | chr6_2:53412281-53412300 | Msa0920090:CDS | 45.0% | |
| GCTCATCATGAATTAGGTCG+GGG | + | chr6_2:53412282-53412301 | Msa0920090:CDS | 45.0% | |
| TACGGAATGAATACGAGCTG+TGG | - | chr6_2:53412364-53412383 | None:intergenic | 45.0% | |
| ! | GGAACCTTTTCAATACGGTC+CGG | + | chr6_2:53412450-53412469 | Msa0920090:CDS | 45.0% |
| CAATCCGGACCGTATTGAAA+AGG | - | chr6_2:53412457-53412476 | None:intergenic | 45.0% | |
| ATGAACGGAAGCTAGCAATC+CGG | - | chr6_2:53412472-53412491 | None:intergenic | 45.0% | |
| CGGTTCTTCCTTCTAATGAC+CGG | + | chr6_2:53412531-53412550 | Msa0920090:CDS | 45.0% | |
| ! | TCTTCCATAACATAACGGGG+CGG | - | chr6_2:53412680-53412699 | None:intergenic | 45.0% |
| TAGTGGGATCCATAGCCTAC+GGG | + | chr6_2:53410491-53410510 | Msa0920090:intron | 50.0% | |
| CCTGCCTACAAGTAGGCTTA+GGG | - | chr6_2:53410558-53410577 | None:intergenic | 50.0% | |
| TCCTGCCTACAAGTAGGCTT+AGG | - | chr6_2:53410559-53410578 | None:intergenic | 50.0% | |
| ! | ATGTCTAGGTTGGGCAAGCT+TGG | + | chr6_2:53410591-53410610 | Msa0920090:CDS | 50.0% |
| !! | CAGCAACTTGTTGGGAGTAG+GGG | - | chr6_2:53410620-53410639 | None:intergenic | 50.0% |
| !! | CCAGCAACTTGTTGGGAGTA+GGG | - | chr6_2:53410621-53410640 | None:intergenic | 50.0% |
| !! | ACCAGCAACTTGTTGGGAGT+AGG | - | chr6_2:53410622-53410641 | None:intergenic | 50.0% |
| ACTCCCAACAAGTTGCTGGT+CGG | + | chr6_2:53410622-53410641 | Msa0920090:CDS | 50.0% | |
| ! | ATCCCGACCAGCAACTTGTT+GGG | - | chr6_2:53410628-53410647 | None:intergenic | 50.0% |
| GGCATAACCAGAAGAGGAGT+AGG | + | chr6_2:53410740-53410759 | Msa0920090:intron | 50.0% | |
| GCAGGATTTGAACCTATGGC+CGG | - | chr6_2:53410868-53410887 | None:intergenic | 50.0% | |
| GGTGGCAGGATTTGAACCTA+TGG | - | chr6_2:53410872-53410891 | None:intergenic | 50.0% | |
| TGATCCACAAGAAAGGTGGC+AGG | - | chr6_2:53410886-53410905 | None:intergenic | 50.0% | |
| GTGGATCATCCTGTGGTTAC+CGG | + | chr6_2:53410898-53410917 | Msa0920090:intron | 50.0% | |
| ATCCTGTGGTTACCGGATGA+TGG | + | chr6_2:53410905-53410924 | Msa0920090:intron | 50.0% | |
| TCCTGTGGTTACCGGATGAT+GGG | + | chr6_2:53410906-53410925 | Msa0920090:intron | 50.0% | |
| ! | TTGGTGCAGCACCTGCATTT+TGG | + | chr6_2:53411056-53411075 | Msa0920090:CDS | 50.0% |
| ! | TATGACGGAACGAAAGACCG+AGG | - | chr6_2:53411099-53411118 | None:intergenic | 50.0% |
| ! | ACGAAGGGAGTGTACAACTG+GGG | - | chr6_2:53411397-53411416 | None:intergenic | 50.0% |
| ! | GAACGAAGGGAGTGTACAAC+TGG | - | chr6_2:53411399-53411418 | None:intergenic | 50.0% |
| AACTTCGTTCGCGAAGGAAC+CGG | + | chr6_2:53411440-53411459 | Msa0920090:CDS | 50.0% | |
| ! | TTTTCCTTCTCGCGAACCAC+GGG | - | chr6_2:53411548-53411567 | None:intergenic | 50.0% |
| TCGGAACTCGCTGATAGGAA+AGG | - | chr6_2:53411679-53411698 | None:intergenic | 50.0% | |
| AAGGATCGGAACTCGCTGAT+AGG | - | chr6_2:53411684-53411703 | None:intergenic | 50.0% | |
| TCTCCGGCATAAATGCAAGG+AGG | - | chr6_2:53411787-53411806 | None:intergenic | 50.0% | |
| ACGTCTCCGGCATAAATGCA+AGG | - | chr6_2:53411790-53411809 | None:intergenic | 50.0% | |
| GAAGGATACCGCCGAAAAGA+AGG | + | chr6_2:53411888-53411907 | Msa0920090:CDS | 50.0% | |
| TTGCTACGCAACAAGAGAGC+TGG | - | chr6_2:53412006-53412025 | None:intergenic | 50.0% | |
| ! | TTTTCGCCTTCTCTTCGCTC+TGG | + | chr6_2:53412058-53412077 | Msa0920090:CDS | 50.0% |
| CCAACAAAGAGGCGAAGTAG+TGG | - | chr6_2:53412151-53412170 | None:intergenic | 50.0% | |
| CCACTACTTCGCCTCTTTGT+TGG | + | chr6_2:53412148-53412167 | Msa0920090:CDS | 50.0% | |
| GAACACAGTGGTATCTGACC+AGG | + | chr6_2:53412182-53412201 | Msa0920090:CDS | 50.0% | |
| ! | CATCATGCCAGGAAGTTGGT+GGG | + | chr6_2:53412260-53412279 | Msa0920090:CDS | 50.0% |
| CATCATGAATTAGGTCGGGG+TGG | + | chr6_2:53412285-53412304 | Msa0920090:CDS | 50.0% | |
| ACTCTTCCATGCTGTGTCTC+AGG | + | chr6_2:53412429-53412448 | Msa0920090:CDS | 50.0% | |
| AAGGTTCCTGAGACACAGCA+TGG | - | chr6_2:53412438-53412457 | None:intergenic | 50.0% | |
| TTTCTCCCAGATGAAGCAGC+AGG | + | chr6_2:53412569-53412588 | Msa0920090:CDS | 50.0% | |
| ! | TTCCATAACATAACGGGGCG+GGG | - | chr6_2:53412678-53412697 | None:intergenic | 50.0% |
| ! | CTTCCATAACATAACGGGGC+GGG | - | chr6_2:53412679-53412698 | None:intergenic | 50.0% |
| TAGTGGGATCCATAGCCTAC+GGG | + | chr6_2:53410491-53410510 | Msa0920090:intron | 50.0% | |
| CCTGCCTACAAGTAGGCTTA+GGG | - | chr6_2:53410558-53410577 | None:intergenic | 50.0% | |
| TCCTGCCTACAAGTAGGCTT+AGG | - | chr6_2:53410559-53410578 | None:intergenic | 50.0% | |
| ! | ATGTCTAGGTTGGGCAAGCT+TGG | + | chr6_2:53410591-53410610 | Msa0920090:CDS | 50.0% |
| !! | CAGCAACTTGTTGGGAGTAG+GGG | - | chr6_2:53410620-53410639 | None:intergenic | 50.0% |
| !! | CCAGCAACTTGTTGGGAGTA+GGG | - | chr6_2:53410621-53410640 | None:intergenic | 50.0% |
| !! | ACCAGCAACTTGTTGGGAGT+AGG | - | chr6_2:53410622-53410641 | None:intergenic | 50.0% |
| ACTCCCAACAAGTTGCTGGT+CGG | + | chr6_2:53410622-53410641 | Msa0920090:CDS | 50.0% | |
| ! | ATCCCGACCAGCAACTTGTT+GGG | - | chr6_2:53410628-53410647 | None:intergenic | 50.0% |
| GGCATAACCAGAAGAGGAGT+AGG | + | chr6_2:53410740-53410759 | Msa0920090:intron | 50.0% | |
| GCAGGATTTGAACCTATGGC+CGG | - | chr6_2:53410868-53410887 | None:intergenic | 50.0% | |
| GGTGGCAGGATTTGAACCTA+TGG | - | chr6_2:53410872-53410891 | None:intergenic | 50.0% | |
| TGATCCACAAGAAAGGTGGC+AGG | - | chr6_2:53410886-53410905 | None:intergenic | 50.0% | |
| GTGGATCATCCTGTGGTTAC+CGG | + | chr6_2:53410898-53410917 | Msa0920090:intron | 50.0% | |
| ATCCTGTGGTTACCGGATGA+TGG | + | chr6_2:53410905-53410924 | Msa0920090:intron | 50.0% | |
| TCCTGTGGTTACCGGATGAT+GGG | + | chr6_2:53410906-53410925 | Msa0920090:intron | 50.0% | |
| ! | TTGGTGCAGCACCTGCATTT+TGG | + | chr6_2:53411056-53411075 | Msa0920090:CDS | 50.0% |
| ! | TATGACGGAACGAAAGACCG+AGG | - | chr6_2:53411099-53411118 | None:intergenic | 50.0% |
| ! | ACGAAGGGAGTGTACAACTG+GGG | - | chr6_2:53411397-53411416 | None:intergenic | 50.0% |
| ! | GAACGAAGGGAGTGTACAAC+TGG | - | chr6_2:53411399-53411418 | None:intergenic | 50.0% |
| AACTTCGTTCGCGAAGGAAC+CGG | + | chr6_2:53411440-53411459 | Msa0920090:CDS | 50.0% | |
| ! | TTTTCCTTCTCGCGAACCAC+GGG | - | chr6_2:53411548-53411567 | None:intergenic | 50.0% |
| TCGGAACTCGCTGATAGGAA+AGG | - | chr6_2:53411679-53411698 | None:intergenic | 50.0% | |
| AAGGATCGGAACTCGCTGAT+AGG | - | chr6_2:53411684-53411703 | None:intergenic | 50.0% | |
| TCTCCGGCATAAATGCAAGG+AGG | - | chr6_2:53411787-53411806 | None:intergenic | 50.0% | |
| ACGTCTCCGGCATAAATGCA+AGG | - | chr6_2:53411790-53411809 | None:intergenic | 50.0% | |
| GAAGGATACCGCCGAAAAGA+AGG | + | chr6_2:53411888-53411907 | Msa0920090:CDS | 50.0% | |
| TTGCTACGCAACAAGAGAGC+TGG | - | chr6_2:53412006-53412025 | None:intergenic | 50.0% | |
| ! | TTTTCGCCTTCTCTTCGCTC+TGG | + | chr6_2:53412058-53412077 | Msa0920090:CDS | 50.0% |
| CCAACAAAGAGGCGAAGTAG+TGG | - | chr6_2:53412151-53412170 | None:intergenic | 50.0% | |
| CCACTACTTCGCCTCTTTGT+TGG | + | chr6_2:53412148-53412167 | Msa0920090:CDS | 50.0% | |
| GAACACAGTGGTATCTGACC+AGG | + | chr6_2:53412182-53412201 | Msa0920090:CDS | 50.0% | |
| ! | CATCATGCCAGGAAGTTGGT+GGG | + | chr6_2:53412260-53412279 | Msa0920090:CDS | 50.0% |
| CATCATGAATTAGGTCGGGG+TGG | + | chr6_2:53412285-53412304 | Msa0920090:CDS | 50.0% | |
| ACTCTTCCATGCTGTGTCTC+AGG | + | chr6_2:53412429-53412448 | Msa0920090:CDS | 50.0% | |
| AAGGTTCCTGAGACACAGCA+TGG | - | chr6_2:53412438-53412457 | None:intergenic | 50.0% | |
| TTTCTCCCAGATGAAGCAGC+AGG | + | chr6_2:53412569-53412588 | Msa0920090:CDS | 50.0% | |
| ! | TTCCATAACATAACGGGGCG+GGG | - | chr6_2:53412678-53412697 | None:intergenic | 50.0% |
| ! | CTTCCATAACATAACGGGGC+GGG | - | chr6_2:53412679-53412698 | None:intergenic | 50.0% |
| TGGGAAAGACCCGTAGGCTA+TGG | - | chr6_2:53410503-53410522 | None:intergenic | 55.0% | |
| CCCTAAGCCTACTTGTAGGC+AGG | + | chr6_2:53410555-53410574 | Msa0920090:CDS | 55.0% | |
| CCCTACTCCCAACAAGTTGC+TGG | + | chr6_2:53410618-53410637 | Msa0920090:CDS | 55.0% | |
| CTCCCAACAAGTTGCTGGTC+GGG | + | chr6_2:53410623-53410642 | Msa0920090:CDS | 55.0% | |
| GATCCCGACCAGCAACTTGT+TGG | - | chr6_2:53410629-53410648 | None:intergenic | 55.0% | |
| GGGTTACCCGCGATTGGTAA+TGG | + | chr6_2:53410719-53410738 | Msa0920090:intron | 55.0% | |
| TGTCTCCCCTACTCCTCTTC+TGG | - | chr6_2:53410750-53410769 | None:intergenic | 55.0% | |
| GAAGAGGAGTAGGGGAGACA+AGG | + | chr6_2:53410750-53410769 | Msa0920090:intron | 55.0% | |
| GTAGCGCAGCGCATCTGTTT+CGG | + | chr6_2:53410784-53410803 | Msa0920090:intron | 55.0% | |
| TAGCGCAGCGCATCTGTTTC+GGG | + | chr6_2:53410785-53410804 | Msa0920090:intron | 55.0% | |
| ! | AGCGCATCTGTTTCGGGTAC+AGG | + | chr6_2:53410791-53410810 | Msa0920090:intron | 55.0% |
| ! | GCGCATCTGTTTCGGGTACA+GGG | + | chr6_2:53410792-53410811 | Msa0920090:intron | 55.0% |
| ! | CGCATCTGTTTCGGGTACAG+GGG | + | chr6_2:53410793-53410812 | Msa0920090:intron | 55.0% |
| TCCCATCATCCGGTAACCAC+AGG | - | chr6_2:53410910-53410929 | None:intergenic | 55.0% | |
| GTCGACCCCGGTAACAAAGA+AGG | - | chr6_2:53411252-53411271 | None:intergenic | 55.0% | |
| CGAAGGAACCGGACGTTTGA+CGG | + | chr6_2:53411451-53411470 | Msa0920090:CDS | 55.0% | |
| GAAGGAACCGGACGTTTGAC+GGG | + | chr6_2:53411452-53411471 | Msa0920090:CDS | 55.0% | |
| AGCGGCGCATAAAAAAGGGC+TGG | - | chr6_2:53411478-53411497 | None:intergenic | 55.0% | |
| ! | ATGCGCCGCTTTACCCTGAA+AGG | + | chr6_2:53411488-53411507 | Msa0920090:CDS | 55.0% |
| ! | CAGCGTTCCCTTCTTTTCGG+CGG | - | chr6_2:53411899-53411918 | None:intergenic | 55.0% |
| ! | GAAGCCTGCTCATGCTGCTT+TGG | + | chr6_2:53412028-53412047 | Msa0920090:CDS | 55.0% |
| TCCTGTCCAGAGCGAAGAGA+AGG | - | chr6_2:53412067-53412086 | None:intergenic | 55.0% | |
| AGATACCACTGTGTTCGCGC+CGG | - | chr6_2:53412178-53412197 | None:intergenic | 55.0% | |
| TTAACCGTGGGCATCATGCC+AGG | + | chr6_2:53412249-53412268 | Msa0920090:CDS | 55.0% | |
| ACTTCCTGGCATGATGCCCA+CGG | - | chr6_2:53412256-53412275 | None:intergenic | 55.0% | |
| TGGGCATCATGCCAGGAAGT+TGG | + | chr6_2:53412256-53412275 | Msa0920090:CDS | 55.0% | |
| GCATCATGCCAGGAAGTTGG+TGG | + | chr6_2:53412259-53412278 | Msa0920090:CDS | 55.0% | |
| TGATGAGCCCACCAACTTCC+TGG | - | chr6_2:53412270-53412289 | None:intergenic | 55.0% | |
| ATGAATTAGGTCGGGGTGGC+TGG | + | chr6_2:53412289-53412308 | Msa0920090:CDS | 55.0% | |
| CGAGCTGTGGCTAATACCCA+AGG | - | chr6_2:53412351-53412370 | None:intergenic | 55.0% | |
| ! | CGATGCCTGCTGCTTCATCT+GGG | - | chr6_2:53412577-53412596 | None:intergenic | 55.0% |
| CCAGATGAAGCAGCAGGCAT+CGG | + | chr6_2:53412575-53412594 | Msa0920090:CDS | 55.0% | |
| TCTTGTGCACCTCCGTCACT+CGG | + | chr6_2:53412641-53412660 | Msa0920090:CDS | 55.0% | |
| AACCCCGCCCCGTTATGTTA+TGG | + | chr6_2:53412673-53412692 | Msa0920090:CDS | 55.0% | |
| TGGGAAAGACCCGTAGGCTA+TGG | - | chr6_2:53410503-53410522 | None:intergenic | 55.0% | |
| CCCTAAGCCTACTTGTAGGC+AGG | + | chr6_2:53410555-53410574 | Msa0920090:CDS | 55.0% | |
| CCCTACTCCCAACAAGTTGC+TGG | + | chr6_2:53410618-53410637 | Msa0920090:CDS | 55.0% | |
| CTCCCAACAAGTTGCTGGTC+GGG | + | chr6_2:53410623-53410642 | Msa0920090:CDS | 55.0% | |
| GATCCCGACCAGCAACTTGT+TGG | - | chr6_2:53410629-53410648 | None:intergenic | 55.0% | |
| GGGTTACCCGCGATTGGTAA+TGG | + | chr6_2:53410719-53410738 | Msa0920090:intron | 55.0% | |
| TGTCTCCCCTACTCCTCTTC+TGG | - | chr6_2:53410750-53410769 | None:intergenic | 55.0% | |
| GAAGAGGAGTAGGGGAGACA+AGG | + | chr6_2:53410750-53410769 | Msa0920090:intron | 55.0% | |
| GTAGCGCAGCGCATCTGTTT+CGG | + | chr6_2:53410784-53410803 | Msa0920090:intron | 55.0% | |
| TAGCGCAGCGCATCTGTTTC+GGG | + | chr6_2:53410785-53410804 | Msa0920090:intron | 55.0% | |
| ! | AGCGCATCTGTTTCGGGTAC+AGG | + | chr6_2:53410791-53410810 | Msa0920090:intron | 55.0% |
| ! | GCGCATCTGTTTCGGGTACA+GGG | + | chr6_2:53410792-53410811 | Msa0920090:intron | 55.0% |
| ! | CGCATCTGTTTCGGGTACAG+GGG | + | chr6_2:53410793-53410812 | Msa0920090:intron | 55.0% |
| TCCCATCATCCGGTAACCAC+AGG | - | chr6_2:53410910-53410929 | None:intergenic | 55.0% | |
| GTCGACCCCGGTAACAAAGA+AGG | - | chr6_2:53411252-53411271 | None:intergenic | 55.0% | |
| CGAAGGAACCGGACGTTTGA+CGG | + | chr6_2:53411451-53411470 | Msa0920090:CDS | 55.0% | |
| GAAGGAACCGGACGTTTGAC+GGG | + | chr6_2:53411452-53411471 | Msa0920090:CDS | 55.0% | |
| AGCGGCGCATAAAAAAGGGC+TGG | - | chr6_2:53411478-53411497 | None:intergenic | 55.0% | |
| ! | ATGCGCCGCTTTACCCTGAA+AGG | + | chr6_2:53411488-53411507 | Msa0920090:CDS | 55.0% |
| ! | CAGCGTTCCCTTCTTTTCGG+CGG | - | chr6_2:53411899-53411918 | None:intergenic | 55.0% |
| ! | GAAGCCTGCTCATGCTGCTT+TGG | + | chr6_2:53412028-53412047 | Msa0920090:CDS | 55.0% |
| TCCTGTCCAGAGCGAAGAGA+AGG | - | chr6_2:53412067-53412086 | None:intergenic | 55.0% | |
| AGATACCACTGTGTTCGCGC+CGG | - | chr6_2:53412178-53412197 | None:intergenic | 55.0% | |
| TTAACCGTGGGCATCATGCC+AGG | + | chr6_2:53412249-53412268 | Msa0920090:CDS | 55.0% | |
| ACTTCCTGGCATGATGCCCA+CGG | - | chr6_2:53412256-53412275 | None:intergenic | 55.0% | |
| TGGGCATCATGCCAGGAAGT+TGG | + | chr6_2:53412256-53412275 | Msa0920090:CDS | 55.0% | |
| GCATCATGCCAGGAAGTTGG+TGG | + | chr6_2:53412259-53412278 | Msa0920090:CDS | 55.0% | |
| TGATGAGCCCACCAACTTCC+TGG | - | chr6_2:53412270-53412289 | None:intergenic | 55.0% | |
| ATGAATTAGGTCGGGGTGGC+TGG | + | chr6_2:53412289-53412308 | Msa0920090:CDS | 55.0% | |
| CGAGCTGTGGCTAATACCCA+AGG | - | chr6_2:53412351-53412370 | None:intergenic | 55.0% | |
| ! | CGATGCCTGCTGCTTCATCT+GGG | - | chr6_2:53412577-53412596 | None:intergenic | 55.0% |
| CCAGATGAAGCAGCAGGCAT+CGG | + | chr6_2:53412575-53412594 | Msa0920090:CDS | 55.0% | |
| TCTTGTGCACCTCCGTCACT+CGG | + | chr6_2:53412641-53412660 | Msa0920090:CDS | 55.0% | |
| AACCCCGCCCCGTTATGTTA+TGG | + | chr6_2:53412673-53412692 | Msa0920090:CDS | 55.0% | |
| !! | CTGGCTTGGGAAAGACCCGT+AGG | - | chr6_2:53410509-53410528 | None:intergenic | 60.0% |
| CTTATTAGGTCAGGGGCGGC+CGG | + | chr6_2:53410691-53410710 | Msa0920090:CDS | 60.0% | |
| TACCAATCGCGGGTAACCCC+CGG | - | chr6_2:53410718-53410737 | None:intergenic | 60.0% | |
| GGGAGACAAGGTTACGCGCT+GGG | + | chr6_2:53410762-53410781 | Msa0920090:intron | 60.0% | |
| !! | TATGGCTTTGGGGTCGACCC+CGG | - | chr6_2:53411264-53411283 | None:intergenic | 60.0% |
| GCTTTGCTCCTCTGGGTGCT+AGG | + | chr6_2:53411518-53411537 | Msa0920090:CDS | 60.0% | |
| !! | CAGCGGATTGACGGAGCTCT+TGG | + | chr6_2:53411634-53411653 | Msa0920090:CDS | 60.0% |
| !! | CATAGCACTGGCGACGTCTC+CGG | - | chr6_2:53411803-53411822 | None:intergenic | 60.0% |
| GGAGACGTCGCCAGTGCTAT+GGG | + | chr6_2:53411802-53411821 | Msa0920090:CDS | 60.0% | |
| GTCGCCAGTGCTATGGGCTT+TGG | + | chr6_2:53411808-53411827 | Msa0920090:CDS | 60.0% | |
| GCGGTATCCTTCCGCATTGG+CGG | - | chr6_2:53411880-53411899 | None:intergenic | 60.0% | |
| TCGGCGGTATCCTTCCGCAT+TGG | - | chr6_2:53411883-53411902 | None:intergenic | 60.0% | |
| CTTCGCTCTGCTGGATGCGT+CGG | + | chr6_2:53411919-53411938 | Msa0920090:CDS | 60.0% | |
| !! | GCCTGCTCATGCTGCTTTGG+CGG | + | chr6_2:53412031-53412050 | Msa0920090:CDS | 60.0% |
| ! | GCCTTCTCTTCGCTCTGGAC+AGG | + | chr6_2:53412063-53412082 | Msa0920090:CDS | 60.0% |
| !! | GACAGGAGCGCTAGTGGACA+CGG | + | chr6_2:53412080-53412099 | Msa0920090:CDS | 60.0% |
| !! | ACAGGAGCGCTAGTGGACAC+GGG | + | chr6_2:53412081-53412100 | Msa0920090:CDS | 60.0% |
| TCGCCTCTTTGTTGGAGCGC+CGG | + | chr6_2:53412156-53412175 | Msa0920090:CDS | 60.0% | |
| AATTAGGTCGGGGTGGCTGG+TGG | + | chr6_2:53412292-53412311 | Msa0920090:CDS | 60.0% | |
| ! | CCGATGCCTGCTGCTTCATC+TGG | - | chr6_2:53412578-53412597 | None:intergenic | 60.0% |
| !! | CTGGCTTGGGAAAGACCCGT+AGG | - | chr6_2:53410509-53410528 | None:intergenic | 60.0% |
| CTTATTAGGTCAGGGGCGGC+CGG | + | chr6_2:53410691-53410710 | Msa0920090:CDS | 60.0% | |
| TACCAATCGCGGGTAACCCC+CGG | - | chr6_2:53410718-53410737 | None:intergenic | 60.0% | |
| GGGAGACAAGGTTACGCGCT+GGG | + | chr6_2:53410762-53410781 | Msa0920090:intron | 60.0% | |
| !! | TATGGCTTTGGGGTCGACCC+CGG | - | chr6_2:53411264-53411283 | None:intergenic | 60.0% |
| GCTTTGCTCCTCTGGGTGCT+AGG | + | chr6_2:53411518-53411537 | Msa0920090:CDS | 60.0% | |
| !! | CAGCGGATTGACGGAGCTCT+TGG | + | chr6_2:53411634-53411653 | Msa0920090:CDS | 60.0% |
| !! | CATAGCACTGGCGACGTCTC+CGG | - | chr6_2:53411803-53411822 | None:intergenic | 60.0% |
| GGAGACGTCGCCAGTGCTAT+GGG | + | chr6_2:53411802-53411821 | Msa0920090:CDS | 60.0% | |
| GTCGCCAGTGCTATGGGCTT+TGG | + | chr6_2:53411808-53411827 | Msa0920090:CDS | 60.0% | |
| GCGGTATCCTTCCGCATTGG+CGG | - | chr6_2:53411880-53411899 | None:intergenic | 60.0% | |
| TCGGCGGTATCCTTCCGCAT+TGG | - | chr6_2:53411883-53411902 | None:intergenic | 60.0% | |
| CTTCGCTCTGCTGGATGCGT+CGG | + | chr6_2:53411919-53411938 | Msa0920090:CDS | 60.0% | |
| !! | GCCTGCTCATGCTGCTTTGG+CGG | + | chr6_2:53412031-53412050 | Msa0920090:CDS | 60.0% |
| ! | GCCTTCTCTTCGCTCTGGAC+AGG | + | chr6_2:53412063-53412082 | Msa0920090:CDS | 60.0% |
| !! | GACAGGAGCGCTAGTGGACA+CGG | + | chr6_2:53412080-53412099 | Msa0920090:CDS | 60.0% |
| !! | ACAGGAGCGCTAGTGGACAC+GGG | + | chr6_2:53412081-53412100 | Msa0920090:CDS | 60.0% |
| TCGCCTCTTTGTTGGAGCGC+CGG | + | chr6_2:53412156-53412175 | Msa0920090:CDS | 60.0% | |
| AATTAGGTCGGGGTGGCTGG+TGG | + | chr6_2:53412292-53412311 | Msa0920090:CDS | 60.0% | |
| ! | CCGATGCCTGCTGCTTCATC+TGG | - | chr6_2:53412578-53412597 | None:intergenic | 60.0% |
| ACCAATCGCGGGTAACCCCC+GGG | - | chr6_2:53410717-53410736 | None:intergenic | 65.0% | |
| GGGGAGACAAGGTTACGCGC+TGG | + | chr6_2:53410761-53410780 | Msa0920090:intron | 65.0% | |
| ! | TTTCGGGTACAGGGGCGACG+AGG | + | chr6_2:53410801-53410820 | Msa0920090:intron | 65.0% |
| TTCGGGTACAGGGGCGACGA+GGG | + | chr6_2:53410802-53410821 | Msa0920090:intron | 65.0% | |
| CCACCCAACCCAGCAGGTCA+GGG | + | chr6_2:53410837-53410856 | Msa0920090:intron | 65.0% | |
| CACCCAACCCAGCAGGTCAG+GGG | + | chr6_2:53410838-53410857 | Msa0920090:intron | 65.0% | |
| ! | GGTGCTGCACCAAACGCAGG+TGG | - | chr6_2:53411049-53411068 | None:intergenic | 65.0% |
| ! | GCAGGTGCTGCACCAAACGC+AGG | - | chr6_2:53411052-53411071 | None:intergenic | 65.0% |
| CGGAGACGTCGCCAGTGCTA+TGG | + | chr6_2:53411801-53411820 | Msa0920090:CDS | 65.0% | |
| CACTCCACTCGCCGCCAATG+CGG | + | chr6_2:53411866-53411885 | Msa0920090:CDS | 65.0% | |
| GGAACGCTGCTTCGCTCTGC+TGG | + | chr6_2:53411910-53411929 | Msa0920090:CDS | 65.0% | |
| GCCGCCAAAGCAGCATGAGC+AGG | - | chr6_2:53412035-53412054 | None:intergenic | 65.0% | |
| !! | GCTCTGGACAGGAGCGCTAG+TGG | + | chr6_2:53412074-53412093 | Msa0920090:CDS | 65.0% |
| !! | CAGGAGCGCTAGTGGACACG+GGG | + | chr6_2:53412082-53412101 | Msa0920090:CDS | 65.0% |
| ! | AGCGCTAGTGGACACGGGGA+GGG | + | chr6_2:53412086-53412105 | Msa0920090:CDS | 65.0% |
| GTCGGGGTGGCTGGTGGTTT+CGG | + | chr6_2:53412298-53412317 | Msa0920090:CDS | 65.0% | |
| TCGGGGTGGCTGGTGGTTTC+GGG | + | chr6_2:53412299-53412318 | Msa0920090:CDS | 65.0% | |
| ACCAATCGCGGGTAACCCCC+GGG | - | chr6_2:53410717-53410736 | None:intergenic | 65.0% | |
| GGGGAGACAAGGTTACGCGC+TGG | + | chr6_2:53410761-53410780 | Msa0920090:intron | 65.0% | |
| ! | TTTCGGGTACAGGGGCGACG+AGG | + | chr6_2:53410801-53410820 | Msa0920090:intron | 65.0% |
| TTCGGGTACAGGGGCGACGA+GGG | + | chr6_2:53410802-53410821 | Msa0920090:intron | 65.0% | |
| CCACCCAACCCAGCAGGTCA+GGG | + | chr6_2:53410837-53410856 | Msa0920090:intron | 65.0% | |
| CACCCAACCCAGCAGGTCAG+GGG | + | chr6_2:53410838-53410857 | Msa0920090:intron | 65.0% | |
| ! | GGTGCTGCACCAAACGCAGG+TGG | - | chr6_2:53411049-53411068 | None:intergenic | 65.0% |
| ! | GCAGGTGCTGCACCAAACGC+AGG | - | chr6_2:53411052-53411071 | None:intergenic | 65.0% |
| CGGAGACGTCGCCAGTGCTA+TGG | + | chr6_2:53411801-53411820 | Msa0920090:CDS | 65.0% | |
| CACTCCACTCGCCGCCAATG+CGG | + | chr6_2:53411866-53411885 | Msa0920090:CDS | 65.0% | |
| GGAACGCTGCTTCGCTCTGC+TGG | + | chr6_2:53411910-53411929 | Msa0920090:CDS | 65.0% | |
| GCCGCCAAAGCAGCATGAGC+AGG | - | chr6_2:53412035-53412054 | None:intergenic | 65.0% | |
| !! | GCTCTGGACAGGAGCGCTAG+TGG | + | chr6_2:53412074-53412093 | Msa0920090:CDS | 65.0% |
| !! | CAGGAGCGCTAGTGGACACG+GGG | + | chr6_2:53412082-53412101 | Msa0920090:CDS | 65.0% |
| ! | AGCGCTAGTGGACACGGGGA+GGG | + | chr6_2:53412086-53412105 | Msa0920090:CDS | 65.0% |
| GTCGGGGTGGCTGGTGGTTT+CGG | + | chr6_2:53412298-53412317 | Msa0920090:CDS | 65.0% | |
| TCGGGGTGGCTGGTGGTTTC+GGG | + | chr6_2:53412299-53412318 | Msa0920090:CDS | 65.0% | |
| TCGGGTACAGGGGCGACGAG+GGG | + | chr6_2:53410803-53410822 | Msa0920090:intron | 70.0% | |
| !! | GGCGACGAGGGGTGCTAACC+CGG | + | chr6_2:53410814-53410833 | Msa0920090:CDS | 70.0% |
| ! | ACCTGCTGGGTTGGGTGGCC+GGG | - | chr6_2:53410835-53410854 | None:intergenic | 70.0% |
| ! | GACCTGCTGGGTTGGGTGGC+CGG | - | chr6_2:53410836-53410855 | None:intergenic | 70.0% |
| GCCACCCAACCCAGCAGGTC+AGG | + | chr6_2:53410836-53410855 | Msa0920090:intron | 70.0% | |
| ! | CCCTGACCTGCTGGGTTGGG+TGG | - | chr6_2:53410840-53410859 | None:intergenic | 70.0% |
| CGCCCCTGACCTGCTGGGTT+GGG | - | chr6_2:53410843-53410862 | None:intergenic | 70.0% | |
| CCAACCCAGCAGGTCAGGGG+CGG | + | chr6_2:53410841-53410860 | Msa0920090:intron | 70.0% | |
| CAACCCAGCAGGTCAGGGGC+GGG | + | chr6_2:53410842-53410861 | Msa0920090:intron | 70.0% | |
| !! | GGGCTGGCCCGTCAAACGTC+CGG | - | chr6_2:53411462-53411481 | None:intergenic | 70.0% |
| CGCTCCCGTGGTTCGCGAGA+AGG | + | chr6_2:53411541-53411560 | Msa0920090:CDS | 70.0% | |
| ! | CCTTCCGCATTGGCGGCGAG+TGG | - | chr6_2:53411873-53411892 | None:intergenic | 70.0% |
| CCACTCGCCGCCAATGCGGA+AGG | + | chr6_2:53411870-53411889 | Msa0920090:CDS | 70.0% | |
| ! | GAGCGCTAGTGGACACGGGG+AGG | + | chr6_2:53412085-53412104 | Msa0920090:CDS | 70.0% |
| AGTGGACACGGGGAGGGAGC+AGG | + | chr6_2:53412092-53412111 | Msa0920090:CDS | 70.0% | |
| ! | GCGCCGGCGCTCCAACAAAG+AGG | - | chr6_2:53412162-53412181 | None:intergenic | 70.0% |
| GTTGCGCGCGAGCCGAGTGA+CGG | - | chr6_2:53412656-53412675 | None:intergenic | 70.0% | |
| TCGGGTACAGGGGCGACGAG+GGG | + | chr6_2:53410803-53410822 | Msa0920090:intron | 70.0% | |
| !! | GGCGACGAGGGGTGCTAACC+CGG | + | chr6_2:53410814-53410833 | Msa0920090:CDS | 70.0% |
| ! | ACCTGCTGGGTTGGGTGGCC+GGG | - | chr6_2:53410835-53410854 | None:intergenic | 70.0% |
| ! | GACCTGCTGGGTTGGGTGGC+CGG | - | chr6_2:53410836-53410855 | None:intergenic | 70.0% |
| GCCACCCAACCCAGCAGGTC+AGG | + | chr6_2:53410836-53410855 | Msa0920090:intron | 70.0% | |
| ! | CCCTGACCTGCTGGGTTGGG+TGG | - | chr6_2:53410840-53410859 | None:intergenic | 70.0% |
| CGCCCCTGACCTGCTGGGTT+GGG | - | chr6_2:53410843-53410862 | None:intergenic | 70.0% | |
| CCAACCCAGCAGGTCAGGGG+CGG | + | chr6_2:53410841-53410860 | Msa0920090:intron | 70.0% | |
| CAACCCAGCAGGTCAGGGGC+GGG | + | chr6_2:53410842-53410861 | Msa0920090:intron | 70.0% | |
| !! | GGGCTGGCCCGTCAAACGTC+CGG | - | chr6_2:53411462-53411481 | None:intergenic | 70.0% |
| CGCTCCCGTGGTTCGCGAGA+AGG | + | chr6_2:53411541-53411560 | Msa0920090:CDS | 70.0% | |
| ! | CCTTCCGCATTGGCGGCGAG+TGG | - | chr6_2:53411873-53411892 | None:intergenic | 70.0% |
| CCACTCGCCGCCAATGCGGA+AGG | + | chr6_2:53411870-53411889 | Msa0920090:CDS | 70.0% | |
| ! | GAGCGCTAGTGGACACGGGG+AGG | + | chr6_2:53412085-53412104 | Msa0920090:CDS | 70.0% |
| AGTGGACACGGGGAGGGAGC+AGG | + | chr6_2:53412092-53412111 | Msa0920090:CDS | 70.0% | |
| ! | GCGCCGGCGCTCCAACAAAG+AGG | - | chr6_2:53412162-53412181 | None:intergenic | 70.0% |
| GTTGCGCGCGAGCCGAGTGA+CGG | - | chr6_2:53412656-53412675 | None:intergenic | 70.0% | |
| ATCGCGGGTAACCCCCGGGC+CGG | - | chr6_2:53410713-53410732 | None:intergenic | 75.0% | |
| GCCCGGGGGTTACCCGCGAT+TGG | + | chr6_2:53410713-53410732 | Msa0920090:intron | 75.0% | |
| ACCCGGCCACCCAACCCAGC+AGG | + | chr6_2:53410831-53410850 | Msa0920090:CDS | 75.0% | |
| CCGCCCCTGACCTGCTGGGT+TGG | - | chr6_2:53410844-53410863 | None:intergenic | 75.0% | |
| !! | CGGGAGCGCCTAGCACCCAG+AGG | - | chr6_2:53411529-53411548 | None:intergenic | 75.0% |
| CTGGGTGCTAGGCGCTCCCG+TGG | + | chr6_2:53411529-53411548 | Msa0920090:CDS | 75.0% | |
| !! | GAGCGCCGGCGCGAACACAG+TGG | + | chr6_2:53412170-53412189 | Msa0920090:CDS | 75.0% |
| ATCGCGGGTAACCCCCGGGC+CGG | - | chr6_2:53410713-53410732 | None:intergenic | 75.0% | |
| GCCCGGGGGTTACCCGCGAT+TGG | + | chr6_2:53410713-53410732 | Msa0920090:intron | 75.0% | |
| ACCCGGCCACCCAACCCAGC+AGG | + | chr6_2:53410831-53410850 | Msa0920090:CDS | 75.0% | |
| CCGCCCCTGACCTGCTGGGT+TGG | - | chr6_2:53410844-53410863 | None:intergenic | 75.0% | |
| !! | CGGGAGCGCCTAGCACCCAG+AGG | - | chr6_2:53411529-53411548 | None:intergenic | 75.0% |
| CTGGGTGCTAGGCGCTCCCG+TGG | + | chr6_2:53411529-53411548 | Msa0920090:CDS | 75.0% | |
| !! | GAGCGCCGGCGCGAACACAG+TGG | + | chr6_2:53412170-53412189 | Msa0920090:CDS | 75.0% |
| ! | TAGGTCAGGGGCGGCCGGCC+CGG | + | chr6_2:53410696-53410715 | Msa0920090:CDS | 80.0% |
| ! | CGGCCCGCCCCTGACCTGCT+GGG | - | chr6_2:53410848-53410867 | None:intergenic | 80.0% |
| ! | CCAGCAGGTCAGGGGCGGGC+CGG | + | chr6_2:53410846-53410865 | Msa0920090:intron | 80.0% |
| ! | GTCAGGGGCGGGCCGGCCAT+AGG | + | chr6_2:53410853-53410872 | Msa0920090:intron | 80.0% |
| ! | GCGCGCGAGCCGAGTGACGG+AGG | - | chr6_2:53412653-53412672 | None:intergenic | 80.0% |
| ! | TAGGTCAGGGGCGGCCGGCC+CGG | + | chr6_2:53410696-53410715 | Msa0920090:CDS | 80.0% |
| ! | CGGCCCGCCCCTGACCTGCT+GGG | - | chr6_2:53410848-53410867 | None:intergenic | 80.0% |
| ! | CCAGCAGGTCAGGGGCGGGC+CGG | + | chr6_2:53410846-53410865 | Msa0920090:intron | 80.0% |
| ! | GTCAGGGGCGGGCCGGCCAT+AGG | + | chr6_2:53410853-53410872 | Msa0920090:intron | 80.0% |
| ! | GCGCGCGAGCCGAGTGACGG+AGG | - | chr6_2:53412653-53412672 | None:intergenic | 80.0% |
| ! | AGGTCAGGGGCGGCCGGCCC+GGG | + | chr6_2:53410697-53410716 | Msa0920090:CDS | 85.0% |
| ! | CCGGCCCGCCCCTGACCTGC+TGG | - | chr6_2:53410849-53410868 | None:intergenic | 85.0% |
| ! | AGGTCAGGGGCGGCCGGCCC+GGG | + | chr6_2:53410697-53410716 | Msa0920090:CDS | 85.0% |
| ! | CCGGCCCGCCCCTGACCTGC+TGG | - | chr6_2:53410849-53410868 | None:intergenic | 85.0% |
| ! | GGTCAGGGGCGGCCGGCCCG+GGG | + | chr6_2:53410698-53410717 | Msa0920090:CDS | 90.0% |
| ! | GTCAGGGGCGGCCGGCCCGG+GGG | + | chr6_2:53410699-53410718 | Msa0920090:CDS | 90.0% |
| ! | GGTCAGGGGCGGCCGGCCCG+GGG | + | chr6_2:53410698-53410717 | Msa0920090:CDS | 90.0% |
| ! | GTCAGGGGCGGCCGGCCCGG+GGG | + | chr6_2:53410699-53410718 | Msa0920090:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53410462 | 53412704 | 53410462 | ID=Msa0920090;Name=Msa0920090 |
| chr6_2 | mRNA | 53410462 | 53412704 | 53410462 | ID=Msa0920090-mRNA-1;Parent=Msa0920090;Name=Msa0920090-mRNA-1;_AED=0.11;_eAED=0.20;_QI=0|0|0|1|0|0|4|0|656 |
| chr6_2 | exon | 53410462 | 53410467 | 53410462 | ID=Msa0920090-mRNA-1:exon:7993;Parent=Msa0920090-mRNA-1 |
| chr6_2 | exon | 53410541 | 53410720 | 53410541 | ID=Msa0920090-mRNA-1:exon:7994;Parent=Msa0920090-mRNA-1 |
| chr6_2 | exon | 53410813 | 53410852 | 53410813 | ID=Msa0920090-mRNA-1:exon:7995;Parent=Msa0920090-mRNA-1 |
| chr6_2 | exon | 53410960 | 53412704 | 53410960 | ID=Msa0920090-mRNA-1:exon:7996;Parent=Msa0920090-mRNA-1 |
| chr6_2 | CDS | 53410462 | 53410467 | 53410462 | ID=Msa0920090-mRNA-1:cds;Parent=Msa0920090-mRNA-1 |
| chr6_2 | CDS | 53410541 | 53410720 | 53410541 | ID=Msa0920090-mRNA-1:cds;Parent=Msa0920090-mRNA-1 |
| chr6_2 | CDS | 53410813 | 53410852 | 53410813 | ID=Msa0920090-mRNA-1:cds;Parent=Msa0920090-mRNA-1 |
| chr6_2 | CDS | 53410960 | 53412704 | 53410960 | ID=Msa0920090-mRNA-1:cds;Parent=Msa0920090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
