Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923680 | XP_003620119.2 | 94.379 | 427 | 15 | 1 | 1 | 418 | 1 | 427 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0320430 | Msa0923680 | 0.802851 | 4.610064e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923680 | MtrunA17_Chr6g0482521 | 94.379 | 427 | 15 | 1 | 1 | 418 | 1 | 427 | 0.0 | 824 |
| Msa0923680 | MtrunA17_Chr1g0188821 | 84.075 | 427 | 55 | 4 | 1 | 416 | 1 | 425 | 0.0 | 701 |
| Msa0923680 | MtrunA17_Chr7g0251521 | 43.826 | 413 | 200 | 5 | 1 | 403 | 1 | 391 | 2.93e-112 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923680 | AT1G73390.7 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G73390.1 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G73390.3 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G73390.2 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G73390.6 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G73390.5 | 75.177 | 423 | 92 | 4 | 1 | 414 | 1 | 419 | 0.0 | 649 |
| Msa0923680 | AT1G17940.3 | 78.431 | 408 | 75 | 4 | 1 | 398 | 1 | 405 | 0.0 | 640 |
| Msa0923680 | AT1G17940.6 | 78.431 | 408 | 75 | 4 | 1 | 398 | 1 | 405 | 0.0 | 640 |
| Msa0923680 | AT1G17940.5 | 78.431 | 408 | 75 | 4 | 1 | 398 | 1 | 405 | 0.0 | 640 |
| Msa0923680 | AT1G17940.1 | 78.431 | 408 | 75 | 4 | 1 | 398 | 1 | 405 | 0.0 | 640 |
| Msa0923680 | AT1G73390.4 | 75.942 | 345 | 71 | 3 | 1 | 336 | 1 | 342 | 0.0 | 531 |
| Msa0923680 | AT1G17940.2 | 75.000 | 300 | 62 | 4 | 1 | 290 | 1 | 297 | 1.60e-154 | 439 |
| Msa0923680 | AT1G17940.4 | 76.531 | 294 | 56 | 4 | 1 | 284 | 1 | 291 | 5.75e-154 | 439 |
| Msa0923680 | AT5G14020.5 | 39.855 | 414 | 213 | 8 | 1 | 396 | 1 | 396 | 5.69e-91 | 281 |
| Msa0923680 | AT5G14020.4 | 39.855 | 414 | 213 | 8 | 1 | 396 | 1 | 396 | 5.69e-91 | 281 |
| Msa0923680 | AT5G14020.1 | 39.855 | 414 | 213 | 8 | 1 | 396 | 1 | 396 | 5.69e-91 | 281 |
| Msa0923680 | AT5G14020.3 | 39.058 | 361 | 185 | 7 | 1 | 344 | 1 | 343 | 1.91e-71 | 228 |
| Msa0923680 | AT5G14020.7 | 39.058 | 361 | 185 | 7 | 1 | 344 | 1 | 343 | 1.91e-71 | 228 |
| Msa0923680 | AT5G14020.2 | 37.582 | 306 | 156 | 7 | 1 | 289 | 1 | 288 | 1.36e-52 | 178 |
| Msa0923680 | AT5G14020.6 | 37.582 | 306 | 156 | 7 | 1 | 289 | 1 | 288 | 1.36e-52 | 178 |
Find 101 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAATCATAGAGATTCTT+AGG | 0.211679 | 6_2:+64306170 | Msa0923680:five_prime_UTR |
| TCTAAAGGCTTCTGGATATC+TGG | 0.243538 | 6_2:+64307475 | Msa0923680:CDS |
| GATATCTTTCTAAAGGCTTC+TGG | 0.245885 | 6_2:+64307467 | Msa0923680:CDS |
| TTCCACTAGTGGACTCTTCT+TGG | 0.275590 | 6_2:+64310252 | Msa0923680:CDS |
| ATGCAGAAATCCACCACTTT+GGG | 0.295835 | 6_2:+64309961 | Msa0923680:intron |
| GGCTCTTGAAGATTACTTGC+CGG | 0.323893 | 6_2:+64306626 | Msa0923680:CDS |
| TTGTAATTGTAGGACCTTCT+TGG | 0.341716 | 6_2:-64306453 | None:intergenic |
| CAGGGTGTAGATATACAAAT+TGG | 0.354606 | 6_2:+64308144 | Msa0923680:intron |
| GGATCAACTCCGAAGGATTC+TGG | 0.358271 | 6_2:+64306262 | Msa0923680:CDS |
| AACATCACCTTCTTGTGAAA+TGG | 0.359369 | 6_2:+64308398 | Msa0923680:CDS |
| GGGGAGTATTGGAGAGGTTT+CGG | 0.359741 | 6_2:+64306303 | Msa0923680:CDS |
| GAGGTTTCGGTATATGTTCC+TGG | 0.365907 | 6_2:+64306316 | Msa0923680:CDS |
| CCTATGCATCCCATCTTTGA+AGG | 0.372987 | 6_2:-64306241 | None:intergenic |
| GATTACTTGCCGGTTCTGTT+AGG | 0.391713 | 6_2:+64306636 | Msa0923680:CDS |
| TTCAATGCCAGGGAAAATTC+AGG | 0.391921 | 6_2:-64310212 | None:intergenic |
| TTCTATTGATATCTTTCTAA+AGG | 0.396920 | 6_2:+64307460 | Msa0923680:CDS |
| CGAAGGAGGCCGGGGAGTAT+TGG | 0.397509 | 6_2:+64306292 | Msa0923680:CDS |
| TTCTTTCCATTCTAGTCAAT+AGG | 0.414124 | 6_2:+64310416 | Msa0923680:three_prime_UTR |
| CGATTTCCACCAGAATCCTT+CGG | 0.417156 | 6_2:-64306271 | None:intergenic |
| GCTGTGGCATATTATTATCA+TGG | 0.417567 | 6_2:+64308706 | Msa0923680:CDS |
| AGTGGAAGTTGATATTCATC+TGG | 0.434131 | 6_2:-64310236 | None:intergenic |
| AACGCTGGCTAATCTTCTTC+AGG | 0.436518 | 6_2:+64306605 | Msa0923680:CDS |
| ATTCATCTGGTTTCAATGCC+AGG | 0.439321 | 6_2:-64310223 | None:intergenic |
| GGTGGAAATCGAAGGAGGCC+GGG | 0.439355 | 6_2:+64306283 | Msa0923680:CDS |
| TGCTTGGTATGAGGTGTTGT+CGG | 0.447527 | 6_2:+64307050 | Msa0923680:CDS |
| TGACCATCACTGGATGATCT+TGG | 0.452353 | 6_2:-64307126 | None:intergenic |
| ACTCCTTCCGCTAGGTCAAC+TGG | 0.454312 | 6_2:-64307646 | None:intergenic |
| TGGTGGAAATCGAAGGAGGC+CGG | 0.462311 | 6_2:+64306282 | Msa0923680:CDS |
| CATATTTCCATTTCACAAGA+AGG | 0.463697 | 6_2:-64308405 | None:intergenic |
| ATGAACCTTCCGTTAGCAAA+TGG | 0.470095 | 6_2:+64308364 | Msa0923680:CDS |
| TTAACTAATCCTAACAGAAC+CGG | 0.471304 | 6_2:-64306645 | None:intergenic |
| TGAAAGGTGCAAGTCAAAGA+AGG | 0.471603 | 6_2:+64310380 | Msa0923680:three_prime_UTR |
| GATGCAGAAATCCACCACTT+TGG | 0.476283 | 6_2:+64309960 | Msa0923680:intron |
| GTGGAAATCGAAGGAGGCCG+GGG | 0.496135 | 6_2:+64306284 | Msa0923680:CDS |
| TGTTTGTATCAGCATTCAGC+AGG | 0.500486 | 6_2:+64306209 | Msa0923680:five_prime_UTR |
| ACCTTGCTTGAAGTATCCTT+AGG | 0.511047 | 6_2:-64310013 | None:intergenic |
| GTATAGTAAACCTTCAAAGA+TGG | 0.512149 | 6_2:+64306231 | Msa0923680:exon |
| GCACTCTCTCTACAAGCGTT+AGG | 0.513970 | 6_2:+64307676 | Msa0923680:CDS |
| GGAAATACAGAGAAATCTCA+TGG | 0.514022 | 6_2:+64308745 | Msa0923680:CDS |
| AGGGAAAATTCAGGCAATGT+TGG | 0.516859 | 6_2:-64310203 | None:intergenic |
| GTGACGAATGATCAAATACT+AGG | 0.517224 | 6_2:+64310324 | Msa0923680:exon |
| ATCATTCGTCACCATTGAGA+TGG | 0.520053 | 6_2:-64310313 | None:intergenic |
| TAGAACGCGTATAGTTGTAA+TGG | 0.521708 | 6_2:+64306426 | Msa0923680:CDS |
| ATGGAAATATGTAGAAGCTA+AGG | 0.522773 | 6_2:+64308417 | Msa0923680:CDS |
| ATTCATTCTAACCATCTCAA+TGG | 0.526004 | 6_2:+64310302 | Msa0923680:CDS |
| CTTGAAAATAGAGCTTCGAT+TGG | 0.527550 | 6_2:+64310538 | Msa0923680:three_prime_UTR |
| ACCTTCCGTTAGCAAATGGA+TGG | 0.530750 | 6_2:+64308368 | Msa0923680:CDS |
| GATGCTGAAATGTTGGCAAC+AGG | 0.531526 | 6_2:+64308224 | Msa0923680:CDS |
| CTGAGTTCTGCAGGTAGCTG+TGG | 0.531587 | 6_2:-64307521 | None:intergenic |
| TGTACAAACCTGAGTTCTGC+AGG | 0.532438 | 6_2:-64307530 | None:intergenic |
| TATAGTAAACCTTCAAAGAT+GGG | 0.532838 | 6_2:+64306232 | Msa0923680:exon |
| TCATGGTTTGATTCTTGATG+AGG | 0.534070 | 6_2:+64308723 | Msa0923680:CDS |
| CATGGTTTGATTCTTGATGA+GGG | 0.537247 | 6_2:+64308724 | Msa0923680:CDS |
| TTCATCTGGTTTCAATGCCA+GGG | 0.538827 | 6_2:-64310222 | None:intergenic |
| AAACAACCATGTCTAATGCT+TGG | 0.540160 | 6_2:+64307034 | Msa0923680:CDS |
| ATCTTCAGGTGGTTCAACGC+TGG | 0.544605 | 6_2:+64306590 | Msa0923680:intron |
| CCTTCAAAGATGGGATGCAT+AGG | 0.544915 | 6_2:+64306241 | Msa0923680:exon |
| CACAGCTACCTGCAGAACTC+AGG | 0.547607 | 6_2:+64307522 | Msa0923680:CDS |
| CCCATCCATTTGCTAACGGA+AGG | 0.548904 | 6_2:-64308369 | None:intergenic |
| GTTGTAATGGCTAGCCAAGA+AGG | 0.554351 | 6_2:+64306439 | Msa0923680:CDS |
| CTGTTAGGATTAGTTAAAGA+CGG | 0.554729 | 6_2:+64306651 | Msa0923680:CDS |
| CTCTCTACAAGCGTTAGGAC+AGG | 0.561917 | 6_2:+64307681 | Msa0923680:CDS |
| TTTCTGCTGATGACCATCAC+TGG | 0.564943 | 6_2:-64307136 | None:intergenic |
| TCGCCCCATCCATTTGCTAA+CGG | 0.567547 | 6_2:-64308373 | None:intergenic |
| TTTCATGTGTGTATAGATCA+CGG | 0.571172 | 6_2:-64310045 | None:intergenic |
| GAAAGGTGCAAGTCAAAGAA+GGG | 0.574614 | 6_2:+64310381 | Msa0923680:three_prime_UTR |
| AAAATGTTGACTTTCTTGAA+AGG | 0.580205 | 6_2:+64310364 | Msa0923680:three_prime_UTR |
| TGTAGATATACAAATTGGAA+TGG | 0.580711 | 6_2:+64308149 | Msa0923680:CDS |
| TACAGAGAAATCTCATGGGA+TGG | 0.581063 | 6_2:+64308750 | Msa0923680:CDS |
| TCCTAAGGATACTTCAAGCA+AGG | 0.584058 | 6_2:+64310012 | Msa0923680:CDS |
| CCTTCCGTTAGCAAATGGAT+GGG | 0.589372 | 6_2:+64308369 | Msa0923680:CDS |
| CATGTGAGATGCTGAAATGT+TGG | 0.592928 | 6_2:+64308217 | Msa0923680:CDS |
| GGCAATGCTATTACTGTCGA+AGG | 0.594679 | 6_2:+64307086 | Msa0923680:CDS |
| TGAATATCAACTTCCACTAG+TGG | 0.595600 | 6_2:+64310241 | Msa0923680:CDS |
| ACAATAGATAACCTTGACAA+TGG | 0.597710 | 6_2:-64308850 | None:intergenic |
| CTCCAAGAAGAGTCCACTAG+TGG | 0.606002 | 6_2:-64310254 | None:intergenic |
| CATGTCTAATGCTTGGTATG+AGG | 0.607207 | 6_2:+64307041 | Msa0923680:CDS |
| GTGATCTATACACACATGAA+AGG | 0.607536 | 6_2:+64310047 | Msa0923680:CDS |
| AGGATTCTGGTGGAAATCGA+AGG | 0.607776 | 6_2:+64306275 | Msa0923680:CDS |
| ACGCTTGTAGAGAGAGTGCT+CGG | 0.611116 | 6_2:-64307672 | None:intergenic |
| ACACTGCTCCTCCATTGTCA+AGG | 0.615950 | 6_2:+64308839 | Msa0923680:CDS |
| TGCAGAAATCCACCACTTTG+GGG | 0.615962 | 6_2:+64309962 | Msa0923680:intron |
| TTCTGGATATCTGGATTGCG+CGG | 0.616722 | 6_2:+64307484 | Msa0923680:CDS |
| CTCGGAGAACTCCTTCCGCT+AGG | 0.619895 | 6_2:-64307654 | None:intergenic |
| CTTCCAAGATCATCCAGTGA+TGG | 0.623353 | 6_2:+64307123 | Msa0923680:CDS |
| CATCAGCAGAAAGTATCAGA+TGG | 0.628189 | 6_2:+64307147 | Msa0923680:CDS |
| CTTCCGTTAGCAAATGGATG+GGG | 0.629607 | 6_2:+64308370 | Msa0923680:CDS |
| GGTTTCGGAATTCTTAAACC+AGG | 0.633571 | 6_2:-64306334 | None:intergenic |
| CTCATACCAAGCATTAGACA+TGG | 0.642248 | 6_2:-64307040 | None:intergenic |
| TTACCAGTTGACCTAGCGGA+AGG | 0.646010 | 6_2:+64307643 | Msa0923680:CDS |
| GAAATACAGAGAAATCTCAT+GGG | 0.646564 | 6_2:+64308746 | Msa0923680:CDS |
| TCAACTCCGAAGGATTCTGG+TGG | 0.647037 | 6_2:+64306265 | Msa0923680:CDS |
| ATGCATAGGATCAACTCCGA+AGG | 0.658890 | 6_2:+64306255 | Msa0923680:CDS |
| TGTCGAAGAATATAATCGAA+CGG | 0.660030 | 6_2:+64306392 | Msa0923680:CDS |
| ATTCTGGTGGAAATCGAAGG+AGG | 0.668058 | 6_2:+64306278 | Msa0923680:CDS |
| ATAGATAACCTTGACAATGG+AGG | 0.670282 | 6_2:-64308847 | None:intergenic |
| GCAGAAATCCACCACTTTGG+GGG | 0.675346 | 6_2:+64309963 | Msa0923680:intron |
| GAAACCTCTCCAATACTCCC+CGG | 0.678283 | 6_2:-64306301 | None:intergenic |
| AAACTTACCAGTTGACCTAG+CGG | 0.687779 | 6_2:+64307639 | Msa0923680:CDS |
| AGAAAGCAAGAAGTTGTGTG+AGG | 0.689038 | 6_2:+64308810 | Msa0923680:CDS |
| GAGGCCGGGGAGTATTGGAG+AGG | 0.692450 | 6_2:+64306297 | Msa0923680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATTCTATGATATAT+TGG | + | chr6_2:64306526-64306545 | Msa0923680:intron | 10.0% |
| !! | AAATCAATAAACATAAAAAA+TGG | - | chr6_2:64308106-64308125 | None:intergenic | 10.0% |
| !!! | ATTTTTGTTATAAAATACTT+TGG | + | chr6_2:64308954-64308973 | Msa0923680:intron | 10.0% |
| !! | AAAATATGTATGAAATTTAG+AGG | - | chr6_2:64306933-64306952 | None:intergenic | 15.0% |
| !!! | ACATATTTTTGAGTTTAATT+TGG | + | chr6_2:64306944-64306963 | Msa0923680:intron | 15.0% |
| !! | AAGATTATATTTCACATTAT+TGG | - | chr6_2:64307410-64307429 | None:intergenic | 15.0% |
| !!! | TAATGTGAAATATAATCTTT+TGG | + | chr6_2:64307411-64307430 | Msa0923680:intron | 15.0% |
| !!! | TAAGAAAACTAATGAATTTT+GGG | - | chr6_2:64307929-64307948 | None:intergenic | 15.0% |
| !!! | TTAAGAAAACTAATGAATTT+TGG | - | chr6_2:64307930-64307949 | None:intergenic | 15.0% |
| !! | AATAAACATAAAAAATGGAT+GGG | - | chr6_2:64308101-64308120 | None:intergenic | 15.0% |
| !!! | AATATAACTACTCTATTTTT+TGG | + | chr6_2:64309216-64309235 | Msa0923680:intron | 15.0% |
| !!! | ATACGTTTATATTTTATAAC+AGG | + | chr6_2:64310165-64310184 | Msa0923680:intron | 15.0% |
| !! | TCAATAGGAAAAAATAAAAT+AGG | + | chr6_2:64310431-64310450 | Msa0923680:three_prime_UTR | 15.0% |
| !! | GTTATAATTTATTGATGCAT+CGG | + | chr6_2:64306553-64306572 | Msa0923680:intron | 20.0% |
| !! | ATTATTTATCTTTATGGTGT+AGG | + | chr6_2:64306845-64306864 | Msa0923680:intron | 20.0% |
| !!! | AATCTTTTTGTAGTATTACT+TGG | - | chr6_2:64307179-64307198 | None:intergenic | 20.0% |
| !! | AAGTAATACTACAAAAAGAT+TGG | + | chr6_2:64307178-64307197 | Msa0923680:intron | 20.0% |
| !! | TTCTATTGATATCTTTCTAA+AGG | + | chr6_2:64307460-64307479 | Msa0923680:CDS | 20.0% |
| !! | AGATTAAACAATACAAAAGT+GGG | - | chr6_2:64307568-64307587 | None:intergenic | 20.0% |
| !! | TAGATTAAACAATACAAAAG+TGG | - | chr6_2:64307569-64307588 | None:intergenic | 20.0% |
| !! | CTAAATAAATTTCCAAGTTA+GGG | - | chr6_2:64307785-64307804 | None:intergenic | 20.0% |
| !! | ACTAAATAAATTTCCAAGTT+AGG | - | chr6_2:64307786-64307805 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATACTGTTCTAA+GGG | + | chr6_2:64307941-64307960 | Msa0923680:intron | 20.0% |
| !! | AGATTCTCTATACAAATTAA+TGG | - | chr6_2:64308021-64308040 | None:intergenic | 20.0% |
| !! | CAATAAACATAAAAAATGGA+TGG | - | chr6_2:64308102-64308121 | None:intergenic | 20.0% |
| !! | ATCTTTGCAATAAATACTTA+AGG | + | chr6_2:64308626-64308645 | Msa0923680:intron | 20.0% |
| !! | TCTTTGCAATAAATACTTAA+GGG | + | chr6_2:64308627-64308646 | Msa0923680:intron | 20.0% |
| !!! | GTTAAAATAAAAGCTCATTT+TGG | + | chr6_2:64309039-64309058 | Msa0923680:intron | 20.0% |
| !! | AGTAGTTATATTATTAACCA+TGG | - | chr6_2:64309208-64309227 | None:intergenic | 20.0% |
| !!! | TTTTGCACAAAAATAAACTA+TGG | + | chr6_2:64309432-64309451 | Msa0923680:intron | 20.0% |
| !!! | TATATTTTATAACAGGATCA+TGG | + | chr6_2:64310172-64310191 | Msa0923680:intron | 20.0% |
| ! | TATGAATCATAGAGATTCTT+AGG | + | chr6_2:64306170-64306189 | Msa0923680:five_prime_UTR | 25.0% |
| ! | TATAGTAAACCTTCAAAGAT+GGG | + | chr6_2:64306232-64306251 | Msa0923680:exon | 25.0% |
| !! | CTTTTTGTTCTTGTAATTGT+AGG | - | chr6_2:64306466-64306485 | None:intergenic | 25.0% |
| !! | AATACAAAGTACAGTTTGTT+TGG | + | chr6_2:64306879-64306898 | Msa0923680:intron | 25.0% |
| ! | TATTTCACATTATTGGATTG+TGG | - | chr6_2:64307403-64307422 | None:intergenic | 25.0% |
| !!! | ATTACTTTGGCTTTGATTTT+AGG | + | chr6_2:64307614-64307633 | Msa0923680:intron | 25.0% |
| !!! | TATTGCTGTTTCTTTTGTAT+TGG | + | chr6_2:64307704-64307723 | Msa0923680:intron | 25.0% |
| ! | AATCAACATAACTTTGTGAT+AGG | - | chr6_2:64307812-64307831 | None:intergenic | 25.0% |
| !!! | AAAACTAATGAATTTTGGGA+TGG | - | chr6_2:64307925-64307944 | None:intergenic | 25.0% |
| !! | GTTTTCTTAATACTGTTCTA+AGG | + | chr6_2:64307940-64307959 | Msa0923680:intron | 25.0% |
| ! | AGAATCTTTCACTAGAATAA+GGG | + | chr6_2:64308034-64308053 | Msa0923680:intron | 25.0% |
| ! | TGTAGATATACAAATTGGAA+TGG | + | chr6_2:64308149-64308168 | Msa0923680:CDS | 25.0% |
| !! | CAAAAAATGTTCTGTTTTAC+AGG | + | chr6_2:64308327-64308346 | Msa0923680:intron | 25.0% |
| ! | TTCTACAACGAAAACTAAAA+AGG | - | chr6_2:64308518-64308537 | None:intergenic | 25.0% |
| !! | AACTTTAAAAACGATTTACC+AGG | + | chr6_2:64308684-64308703 | Msa0923680:intron | 25.0% |
| ! | ATATCATAGCAGTTTGTAAA+GGG | - | chr6_2:64308880-64308899 | None:intergenic | 25.0% |
| ! | AATATCATAGCAGTTTGTAA+AGG | - | chr6_2:64308881-64308900 | None:intergenic | 25.0% |
| !! | TTTTACATGAACAATCACAT+AGG | - | chr6_2:64308921-64308940 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTCTAGTTAAGCA+AGG | + | chr6_2:64308987-64309006 | Msa0923680:intron | 25.0% |
| !!! | AAGGATGTTTTTGGAAAAAT+TGG | + | chr6_2:64309006-64309025 | Msa0923680:intron | 25.0% |
| ! | TTATTAACTGTACATCAACA+TGG | - | chr6_2:64309098-64309117 | None:intergenic | 25.0% |
| !! | CAATTGAGTACAAATTTTTG+TGG | - | chr6_2:64309459-64309478 | None:intergenic | 25.0% |
| !! | GTTTTGTACTTTCGAAAATT+TGG | + | chr6_2:64309542-64309561 | Msa0923680:intron | 25.0% |
| !!! | AAATTTTCTGAGAAATAGAG+AGG | + | chr6_2:64309787-64309806 | Msa0923680:intron | 25.0% |
| ! | ATGTCTTCGAAAAATGTTAT+AGG | - | chr6_2:64309837-64309856 | None:intergenic | 25.0% |
| ! | CTTATACTATACTATAATGC+CGG | + | chr6_2:64309899-64309918 | Msa0923680:intron | 25.0% |
| !!! | TTTTTCAGAGAGATATTTCA+TGG | - | chr6_2:64309990-64310009 | None:intergenic | 25.0% |
| ! | TGTAGTACATGAAAAAGAAA+AGG | + | chr6_2:64310129-64310148 | Msa0923680:intron | 25.0% |
| !!! | AAAATGTTGACTTTCTTGAA+AGG | + | chr6_2:64310364-64310383 | Msa0923680:three_prime_UTR | 25.0% |
| !!! | TTTTTTCCTATTGACTAGAA+TGG | - | chr6_2:64310425-64310444 | None:intergenic | 25.0% |
| ! | AAGTACAATAAAAAAGAGAG+TGG | - | chr6_2:64310473-64310492 | None:intergenic | 25.0% |
| GTATAGTAAACCTTCAAAGA+TGG | + | chr6_2:64306231-64306250 | Msa0923680:exon | 30.0% | |
| TGAGAAAAATCAACAGGTTT+CGG | - | chr6_2:64306352-64306371 | None:intergenic | 30.0% | |
| GATGATTGAGAAAAATCAAC+AGG | - | chr6_2:64306358-64306377 | None:intergenic | 30.0% | |
| ! | GATTTTTCTCAATCATCACT+TGG | + | chr6_2:64306361-64306380 | Msa0923680:CDS | 30.0% |
| TGTCGAAGAATATAATCGAA+CGG | + | chr6_2:64306392-64306411 | Msa0923680:CDS | 30.0% | |
| !! | AGAAAAAGTGTTACTCAACA+TGG | + | chr6_2:64306484-64306503 | Msa0923680:CDS | 30.0% |
| ! | CATGGTTAGTTATTTAGCAA+AGG | + | chr6_2:64306502-64306521 | Msa0923680:intron | 30.0% |
| TTAACTAATCCTAACAGAAC+CGG | - | chr6_2:64306648-64306667 | None:intergenic | 30.0% | |
| !! | CTGTTAGGATTAGTTAAAGA+CGG | + | chr6_2:64306651-64306670 | Msa0923680:CDS | 30.0% |
| TGTAAATGGTTTAAACATCG+AGG | - | chr6_2:64306749-64306768 | None:intergenic | 30.0% | |
| TGATCAGCATTCTTCTATAT+AGG | - | chr6_2:64306979-64306998 | None:intergenic | 30.0% | |
| ATTATTGGATTGTGGCAAAA+TGG | - | chr6_2:64307395-64307414 | None:intergenic | 30.0% | |
| AATAAGCATCAAAGGAATGA+AGG | - | chr6_2:64307597-64307616 | None:intergenic | 30.0% | |
| TCCTTTGATGCTTATTACTT+TGG | + | chr6_2:64307601-64307620 | Msa0923680:intron | 30.0% | |
| TTTGTATCATTGTTCCTCAA+TGG | + | chr6_2:64307741-64307760 | Msa0923680:intron | 30.0% | |
| !!! | AGATTAGTTTTTAGCCATTG+AGG | - | chr6_2:64307758-64307777 | None:intergenic | 30.0% |
| !!! | AAGGGAGTTTAGTTTTATCT+AGG | + | chr6_2:64307959-64307978 | Msa0923680:intron | 30.0% |
| !!! | AGGGAGTTTAGTTTTATCTA+GGG | + | chr6_2:64307960-64307979 | Msa0923680:intron | 30.0% |
| GAGAATCTTTCACTAGAATA+AGG | + | chr6_2:64308033-64308052 | Msa0923680:intron | 30.0% | |
| GAATCTTTCACTAGAATAAG+GGG | + | chr6_2:64308035-64308054 | Msa0923680:intron | 30.0% | |
| CATATTTCCATTTCACAAGA+AGG | - | chr6_2:64308408-64308427 | None:intergenic | 30.0% | |
| ATGGAAATATGTAGAAGCTA+AGG | + | chr6_2:64308417-64308436 | Msa0923680:CDS | 30.0% | |
| CCAAGATACACATAACTTAT+AGG | - | chr6_2:64308454-64308473 | None:intergenic | 30.0% | |
| CCTATAAGTTATGTGTATCT+TGG | + | chr6_2:64308451-64308470 | Msa0923680:intron | 30.0% | |
| TTTATTGCAAAGATCGAAGT+AGG | - | chr6_2:64308620-64308639 | None:intergenic | 30.0% | |
| GAAATACAGAGAAATCTCAT+GGG | + | chr6_2:64308746-64308765 | Msa0923680:CDS | 30.0% | |
| ACAATAGATAACCTTGACAA+TGG | - | chr6_2:64308853-64308872 | None:intergenic | 30.0% | |
| TATCATAGCAGTTTGTAAAG+GGG | - | chr6_2:64308879-64308898 | None:intergenic | 30.0% | |
| ! | TAGTTAAGCAAGGATGTTTT+TGG | + | chr6_2:64308997-64309016 | Msa0923680:intron | 30.0% |
| GATTAATAATGCCAGCTTTA+GGG | + | chr6_2:64309061-64309080 | Msa0923680:intron | 30.0% | |
| TCTGTTAGATAAGAATTCCA+TGG | + | chr6_2:64309188-64309207 | Msa0923680:intron | 30.0% | |
| GAAGATTCGAGAATAATTAC+TGG | - | chr6_2:64309626-64309645 | None:intergenic | 30.0% | |
| ! | GAATCTTCAATTGAGTTTTG+AGG | + | chr6_2:64309638-64309657 | Msa0923680:intron | 30.0% |
| TGGTATGTAACTATAGTTGT+AGG | + | chr6_2:64309680-64309699 | Msa0923680:intron | 30.0% | |
| CTATAGTTGTAGGTGTATAA+AGG | + | chr6_2:64309690-64309709 | Msa0923680:intron | 30.0% | |
| ! | TCTCTCTGAAAAAATTCCTA+AGG | + | chr6_2:64309997-64310016 | Msa0923680:CDS | 30.0% |
| TTTCATGTGTGTATAGATCA+CGG | - | chr6_2:64310048-64310067 | None:intergenic | 30.0% | |
| ! | CACATGAAAGGTAAATTTTC+TGG | + | chr6_2:64310059-64310078 | Msa0923680:intron | 30.0% |
| ATTCATTCTAACCATCTCAA+TGG | + | chr6_2:64310302-64310321 | Msa0923680:CDS | 30.0% | |
| TTCTTTCCATTCTAGTCAAT+AGG | + | chr6_2:64310416-64310435 | Msa0923680:three_prime_UTR | 30.0% | |
| TAGAACGCGTATAGTTGTAA+TGG | + | chr6_2:64306426-64306445 | Msa0923680:CDS | 35.0% | |
| TTGTAATTGTAGGACCTTCT+TGG | - | chr6_2:64306456-64306475 | None:intergenic | 35.0% | |
| GAACCAAGAAGATGAAAAAG+AGG | + | chr6_2:64306904-64306923 | Msa0923680:intron | 35.0% | |
| AAACAACCATGTCTAATGCT+TGG | + | chr6_2:64307034-64307053 | Msa0923680:CDS | 35.0% | |
| ! | GATATCTTTCTAAAGGCTTC+TGG | + | chr6_2:64307467-64307486 | Msa0923680:CDS | 35.0% |
| AACTCAGGTTTGTACATATC+TGG | + | chr6_2:64307537-64307556 | Msa0923680:intron | 35.0% | |
| GCCAAAGTAATAAGCATCAA+AGG | - | chr6_2:64307605-64307624 | None:intergenic | 35.0% | |
| CGAGCAAATTGTTATCTTCA+TGG | - | chr6_2:64307901-64307920 | None:intergenic | 35.0% | |
| !!! | GGGAGTTTAGTTTTATCTAG+GGG | + | chr6_2:64307961-64307980 | Msa0923680:intron | 35.0% |
| ATGGATGGGAACATGATTAA+TGG | - | chr6_2:64308087-64308106 | None:intergenic | 35.0% | |
| !! | TCCTTTACTGTTTTTCCTTC+AGG | + | chr6_2:64308125-64308144 | Msa0923680:intron | 35.0% |
| !! | CCTTTACTGTTTTTCCTTCA+GGG | + | chr6_2:64308126-64308145 | Msa0923680:intron | 35.0% |
| TTTGTATATCTACACCCTGA+AGG | - | chr6_2:64308143-64308162 | None:intergenic | 35.0% | |
| CAGGGTGTAGATATACAAAT+TGG | + | chr6_2:64308144-64308163 | Msa0923680:intron | 35.0% | |
| AACATCACCTTCTTGTGAAA+TGG | + | chr6_2:64308398-64308417 | Msa0923680:CDS | 35.0% | |
| GCTGTGGCATATTATTATCA+TGG | + | chr6_2:64308706-64308725 | Msa0923680:CDS | 35.0% | |
| TCATGGTTTGATTCTTGATG+AGG | + | chr6_2:64308723-64308742 | Msa0923680:CDS | 35.0% | |
| CATGGTTTGATTCTTGATGA+GGG | + | chr6_2:64308724-64308743 | Msa0923680:CDS | 35.0% | |
| GGAAATACAGAGAAATCTCA+TGG | + | chr6_2:64308745-64308764 | Msa0923680:CDS | 35.0% | |
| ATAGATAACCTTGACAATGG+AGG | - | chr6_2:64308850-64308869 | None:intergenic | 35.0% | |
| TGGAAAAATTGGAGTCTAAC+TGG | + | chr6_2:64309017-64309036 | Msa0923680:intron | 35.0% | |
| GGATTAATAATGCCAGCTTT+AGG | + | chr6_2:64309060-64309079 | Msa0923680:intron | 35.0% | |
| AAGAACTTCATACGACAGAT+AGG | - | chr6_2:64309149-64309168 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTTAGGAATCGAA+GGG | - | chr6_2:64309248-64309267 | None:intergenic | 35.0% |
| CCTTCGATTCCTAAGAAAAA+GGG | + | chr6_2:64309246-64309265 | Msa0923680:intron | 35.0% | |
| ! | TTACTACAGCCCTTTTTCTT+AGG | - | chr6_2:64309258-64309277 | None:intergenic | 35.0% |
| ! | TAGTAATCTAGAGTTCAACC+AGG | + | chr6_2:64309272-64309291 | Msa0923680:intron | 35.0% |
| ! | AGTAATCTAGAGTTCAACCA+GGG | + | chr6_2:64309273-64309292 | Msa0923680:intron | 35.0% |
| AGCGAATGATTATTCCATTC+AGG | + | chr6_2:64309312-64309331 | Msa0923680:intron | 35.0% | |
| GCGAATGATTATTCCATTCA+GGG | + | chr6_2:64309313-64309332 | Msa0923680:intron | 35.0% | |
| CGAATGATTATTCCATTCAG+GGG | + | chr6_2:64309314-64309333 | Msa0923680:intron | 35.0% | |
| !! | ACAATTCTAGCTCATTGATC+TGG | + | chr6_2:64309396-64309415 | Msa0923680:intron | 35.0% |
| AGAAGAAACTCATGATCACA+AGG | - | chr6_2:64309519-64309538 | None:intergenic | 35.0% | |
| ! | CAAAATCAATTTGCTTCGAG+GGG | - | chr6_2:64309579-64309598 | None:intergenic | 35.0% |
| ! | GCAAAATCAATTTGCTTCGA+GGG | - | chr6_2:64309580-64309599 | None:intergenic | 35.0% |
| ! | AGCAAAATCAATTTGCTTCG+AGG | - | chr6_2:64309581-64309600 | None:intergenic | 35.0% |
| !!! | GAGTTTTGAGGATCATAATG+AGG | + | chr6_2:64309650-64309669 | Msa0923680:intron | 35.0% |
| GATCATAATGAGGATGTTGT+TGG | + | chr6_2:64309660-64309679 | Msa0923680:intron | 35.0% | |
| GTGATCTATACACACATGAA+AGG | + | chr6_2:64310047-64310066 | Msa0923680:CDS | 35.0% | |
| ATGATCATCAGATTGCAGTT+AGG | - | chr6_2:64310106-64310125 | None:intergenic | 35.0% | |
| !! | AGTGGAAGTTGATATTCATC+TGG | - | chr6_2:64310239-64310258 | None:intergenic | 35.0% |
| TGAATATCAACTTCCACTAG+TGG | + | chr6_2:64310241-64310260 | Msa0923680:CDS | 35.0% | |
| GTGACGAATGATCAAATACT+AGG | + | chr6_2:64310324-64310343 | Msa0923680:exon | 35.0% | |
| ! | CAATCGAAGCTCTATTTTCA+AGG | - | chr6_2:64310540-64310559 | None:intergenic | 35.0% |
| CTTGAAAATAGAGCTTCGAT+TGG | + | chr6_2:64310538-64310557 | Msa0923680:three_prime_UTR | 35.0% | |
| TGTTTGTATCAGCATTCAGC+AGG | + | chr6_2:64306209-64306228 | Msa0923680:five_prime_UTR | 40.0% | |
| GGTTTCGGAATTCTTAAACC+AGG | - | chr6_2:64306337-64306356 | None:intergenic | 40.0% | |
| TGTCGTGTGATTTCATCTTC+AGG | + | chr6_2:64306576-64306595 | Msa0923680:intron | 40.0% | |
| ! | GCTCTCTGTATTTTATCAGC+AGG | + | chr6_2:64306709-64306728 | Msa0923680:intron | 40.0% |
| ATAGCATACATCAACCACTG+GGG | - | chr6_2:64306801-64306820 | None:intergenic | 40.0% | |
| GATAGCATACATCAACCACT+GGG | - | chr6_2:64306802-64306821 | None:intergenic | 40.0% | |
| AGATAGCATACATCAACCAC+TGG | - | chr6_2:64306803-64306822 | None:intergenic | 40.0% | |
| !! | CTGCCTCTTTTTCATCTTCT+TGG | - | chr6_2:64306910-64306929 | None:intergenic | 40.0% |
| GAATGCTGATCAATTTGTCC+CGG | + | chr6_2:64306987-64307006 | Msa0923680:intron | 40.0% | |
| ! | AAAGAGTGCACAGAAGTAAC+CGG | - | chr6_2:64307009-64307028 | None:intergenic | 40.0% |
| TACTTCTGTGCACTCTTTAC+AGG | + | chr6_2:64307011-64307030 | Msa0923680:intron | 40.0% | |
| CTCATACCAAGCATTAGACA+TGG | - | chr6_2:64307043-64307062 | None:intergenic | 40.0% | |
| CATGTCTAATGCTTGGTATG+AGG | + | chr6_2:64307041-64307060 | Msa0923680:CDS | 40.0% | |
| !!! | GTTGTCGGTTTTGCATTTGA+TGG | + | chr6_2:64307065-64307084 | Msa0923680:CDS | 40.0% |
| !! | CATCAGCAGAAAGTATCAGA+TGG | + | chr6_2:64307147-64307166 | Msa0923680:CDS | 40.0% |
| GCTTGCAAATCGCGTATAAA+TGG | + | chr6_2:64307206-64307225 | Msa0923680:intron | 40.0% | |
| TTGGATTGTGGCAAAATGGA+AGG | - | chr6_2:64307391-64307410 | None:intergenic | 40.0% | |
| TCTAAAGGCTTCTGGATATC+TGG | + | chr6_2:64307475-64307494 | Msa0923680:CDS | 40.0% | |
| AAACTTACCAGTTGACCTAG+CGG | + | chr6_2:64307639-64307658 | Msa0923680:CDS | 40.0% | |
| ACTAATCTGCTTCCCTAACT+TGG | + | chr6_2:64307770-64307789 | Msa0923680:intron | 40.0% | |
| CCCTGAAGGAAAAACAGTAA+AGG | - | chr6_2:64308129-64308148 | None:intergenic | 40.0% | |
| CATGTGAGATGCTGAAATGT+TGG | + | chr6_2:64308217-64308236 | Msa0923680:CDS | 40.0% | |
| ATGAACCTTCCGTTAGCAAA+TGG | + | chr6_2:64308364-64308383 | Msa0923680:CDS | 40.0% | |
| !! | GTTATGTGTATCTTGGTGCT+TGG | + | chr6_2:64308458-64308477 | Msa0923680:intron | 40.0% |
| !! | GAACGAAAAGAGTACTATGC+AGG | - | chr6_2:64308496-64308515 | None:intergenic | 40.0% |
| AAAAACGATTTACCAGGCTG+TGG | + | chr6_2:64308690-64308709 | Msa0923680:intron | 40.0% | |
| GATAATAATATGCCACAGCC+TGG | - | chr6_2:64308705-64308724 | None:intergenic | 40.0% | |
| TACAGAGAAATCTCATGGGA+TGG | + | chr6_2:64308750-64308769 | Msa0923680:CDS | 40.0% | |
| AGAAAGCAAGAAGTTGTGTG+AGG | + | chr6_2:64308810-64308829 | Msa0923680:CDS | 40.0% | |
| ACATCAACATGGATCAACAC+TGG | - | chr6_2:64309087-64309106 | None:intergenic | 40.0% | |
| CCCTTCGATTCCTAAGAAAA+AGG | + | chr6_2:64309245-64309264 | Msa0923680:intron | 40.0% | |
| ! | CCCTTTTTCTTAGGAATCGA+AGG | - | chr6_2:64309249-64309268 | None:intergenic | 40.0% |
| ! | GTAATCTAGAGTTCAACCAG+GGG | + | chr6_2:64309274-64309293 | Msa0923680:intron | 40.0% |
| TTTCAACTAAAGCCTAGCCA+AGG | - | chr6_2:64309360-64309379 | None:intergenic | 40.0% | |
| CCAAATACAAGATGCTTCAC+AGG | - | chr6_2:64309493-64309512 | None:intergenic | 40.0% | |
| ! | CCTGTGAAGCATCTTGTATT+TGG | + | chr6_2:64309490-64309509 | Msa0923680:intron | 40.0% |
| GCCATAATACAACACAACAC+CGG | - | chr6_2:64309921-64309940 | None:intergenic | 40.0% | |
| ATCATGGCTGCAAGTTAGAT+GGG | - | chr6_2:64309943-64309962 | None:intergenic | 40.0% | |
| ATGCAGAAATCCACCACTTT+GGG | + | chr6_2:64309961-64309980 | Msa0923680:intron | 40.0% | |
| TCCTAAGGATACTTCAAGCA+AGG | + | chr6_2:64310012-64310031 | Msa0923680:CDS | 40.0% | |
| ! | ACCTTGCTTGAAGTATCCTT+AGG | - | chr6_2:64310016-64310035 | None:intergenic | 40.0% |
| ! | TCTGGAGTTCATGACTAATC+TGG | + | chr6_2:64310077-64310096 | Msa0923680:intron | 40.0% |
| AGGGAAAATTCAGGCAATGT+TGG | - | chr6_2:64310206-64310225 | None:intergenic | 40.0% | |
| ! | AACATTGCCTGAATTTTCCC+TGG | + | chr6_2:64310205-64310224 | Msa0923680:CDS | 40.0% |
| TTCAATGCCAGGGAAAATTC+AGG | - | chr6_2:64310215-64310234 | None:intergenic | 40.0% | |
| ! | TTCATCTGGTTTCAATGCCA+GGG | - | chr6_2:64310225-64310244 | None:intergenic | 40.0% |
| ! | ATTCATCTGGTTTCAATGCC+AGG | - | chr6_2:64310226-64310245 | None:intergenic | 40.0% |
| ATCATTCGTCACCATTGAGA+TGG | - | chr6_2:64310316-64310335 | None:intergenic | 40.0% | |
| ! | TGAAAGGTGCAAGTCAAAGA+AGG | + | chr6_2:64310380-64310399 | Msa0923680:three_prime_UTR | 40.0% |
| ! | GAAAGGTGCAAGTCAAAGAA+GGG | + | chr6_2:64310381-64310400 | Msa0923680:three_prime_UTR | 40.0% |
| CCTATGCATCCCATCTTTGA+AGG | - | chr6_2:64306244-64306263 | None:intergenic | 45.0% | |
| CCTTCAAAGATGGGATGCAT+AGG | + | chr6_2:64306241-64306260 | Msa0923680:exon | 45.0% | |
| ATGCATAGGATCAACTCCGA+AGG | + | chr6_2:64306255-64306274 | Msa0923680:CDS | 45.0% | |
| CGATTTCCACCAGAATCCTT+CGG | - | chr6_2:64306274-64306293 | None:intergenic | 45.0% | |
| AGGATTCTGGTGGAAATCGA+AGG | + | chr6_2:64306275-64306294 | Msa0923680:CDS | 45.0% | |
| ATTCTGGTGGAAATCGAAGG+AGG | + | chr6_2:64306278-64306297 | Msa0923680:CDS | 45.0% | |
| GAGGTTTCGGTATATGTTCC+TGG | + | chr6_2:64306316-64306335 | Msa0923680:CDS | 45.0% | |
| ! | GTTGTAATGGCTAGCCAAGA+AGG | + | chr6_2:64306439-64306458 | Msa0923680:CDS | 45.0% |
| CGTGTGATTTCATCTTCAGG+TGG | + | chr6_2:64306579-64306598 | Msa0923680:intron | 45.0% | |
| ! | AACGCTGGCTAATCTTCTTC+AGG | + | chr6_2:64306605-64306624 | Msa0923680:CDS | 45.0% |
| GGCTCTTGAAGATTACTTGC+CGG | + | chr6_2:64306626-64306645 | Msa0923680:CDS | 45.0% | |
| !! | GATTACTTGCCGGTTCTGTT+AGG | + | chr6_2:64306636-64306655 | Msa0923680:CDS | 45.0% |
| ! | AAGAGTGCACAGAAGTAACC+GGG | - | chr6_2:64307008-64307027 | None:intergenic | 45.0% |
| !! | TGCTTGGTATGAGGTGTTGT+CGG | + | chr6_2:64307050-64307069 | Msa0923680:CDS | 45.0% |
| GGCAATGCTATTACTGTCGA+AGG | + | chr6_2:64307086-64307105 | Msa0923680:CDS | 45.0% | |
| CTTCCAAGATCATCCAGTGA+TGG | + | chr6_2:64307123-64307142 | Msa0923680:CDS | 45.0% | |
| TGACCATCACTGGATGATCT+TGG | - | chr6_2:64307129-64307148 | None:intergenic | 45.0% | |
| TTTCTGCTGATGACCATCAC+TGG | - | chr6_2:64307139-64307158 | None:intergenic | 45.0% | |
| TTCTGGATATCTGGATTGCG+CGG | + | chr6_2:64307484-64307503 | Msa0923680:CDS | 45.0% | |
| TGTACAAACCTGAGTTCTGC+AGG | - | chr6_2:64307533-64307552 | None:intergenic | 45.0% | |
| !! | ACCGTTGATTTAGCATCGCT+AGG | + | chr6_2:64307838-64307857 | Msa0923680:intron | 45.0% |
| CCCTAGCGATGCTAAATCAA+CGG | - | chr6_2:64307842-64307861 | None:intergenic | 45.0% | |
| !! | CCGTTGATTTAGCATCGCTA+GGG | + | chr6_2:64307839-64307858 | Msa0923680:intron | 45.0% |
| GATGCTGAAATGTTGGCAAC+AGG | + | chr6_2:64308224-64308243 | Msa0923680:CDS | 45.0% | |
| ACCTTCCGTTAGCAAATGGA+TGG | + | chr6_2:64308368-64308387 | Msa0923680:CDS | 45.0% | |
| CCTTCCGTTAGCAAATGGAT+GGG | + | chr6_2:64308369-64308388 | Msa0923680:CDS | 45.0% | |
| CTTCCGTTAGCAAATGGATG+GGG | + | chr6_2:64308370-64308389 | Msa0923680:CDS | 45.0% | |
| GCAAAGATCGAAGTAGGCTA+AGG | - | chr6_2:64308614-64308633 | None:intergenic | 45.0% | |
| TAGACTTGACTTAGTTCCCC+TGG | - | chr6_2:64309293-64309312 | None:intergenic | 45.0% | |
| GTTATAGGCTCTTGCAGAAG+TGG | - | chr6_2:64309822-64309841 | None:intergenic | 45.0% | |
| !! | GCCGGTGTTGTGTTGTATTA+TGG | + | chr6_2:64309917-64309936 | Msa0923680:intron | 45.0% |
| CATCATGGCTGCAAGTTAGA+TGG | - | chr6_2:64309944-64309963 | None:intergenic | 45.0% | |
| !! | AGTGGTGGATTTCTGCATCA+TGG | - | chr6_2:64309959-64309978 | None:intergenic | 45.0% |
| GATGCAGAAATCCACCACTT+TGG | + | chr6_2:64309960-64309979 | Msa0923680:intron | 45.0% | |
| TGCAGAAATCCACCACTTTG+GGG | + | chr6_2:64309962-64309981 | Msa0923680:intron | 45.0% | |
| TATTTCATGGTCCCCCAAAG+TGG | - | chr6_2:64309977-64309996 | None:intergenic | 45.0% | |
| !! | TTCCACTAGTGGACTCTTCT+TGG | + | chr6_2:64310252-64310271 | Msa0923680:CDS | 45.0% |
| !! | ATTATTATTATTTATCTTTA+TGG | + | chr6_2:64306839-64306858 | Msa0923680:intron | 5.0% |
| GGATCAACTCCGAAGGATTC+TGG | + | chr6_2:64306262-64306281 | Msa0923680:CDS | 50.0% | |
| TCAACTCCGAAGGATTCTGG+TGG | + | chr6_2:64306265-64306284 | Msa0923680:CDS | 50.0% | |
| GAAACCTCTCCAATACTCCC+CGG | - | chr6_2:64306304-64306323 | None:intergenic | 50.0% | |
| !! | GGGGAGTATTGGAGAGGTTT+CGG | + | chr6_2:64306303-64306322 | Msa0923680:CDS | 50.0% |
| ATCTTCAGGTGGTTCAACGC+TGG | + | chr6_2:64306590-64306609 | Msa0923680:intron | 50.0% | |
| TTACCAGTTGACCTAGCGGA+AGG | + | chr6_2:64307643-64307662 | Msa0923680:CDS | 50.0% | |
| !! | ACGCTTGTAGAGAGAGTGCT+CGG | - | chr6_2:64307675-64307694 | None:intergenic | 50.0% |
| GCACTCTCTCTACAAGCGTT+AGG | + | chr6_2:64307676-64307695 | Msa0923680:CDS | 50.0% | |
| CTCTCTACAAGCGTTAGGAC+AGG | + | chr6_2:64307681-64307700 | Msa0923680:CDS | 50.0% | |
| ! | CCCATCCATTTGCTAACGGA+AGG | - | chr6_2:64308372-64308391 | None:intergenic | 50.0% |
| ! | TCGCCCCATCCATTTGCTAA+CGG | - | chr6_2:64308376-64308395 | None:intergenic | 50.0% |
| ACACTGCTCCTCCATTGTCA+AGG | + | chr6_2:64308839-64308858 | Msa0923680:CDS | 50.0% | |
| ATCAACACTGGCCCTAAAGC+TGG | - | chr6_2:64309075-64309094 | None:intergenic | 50.0% | |
| TTCCATTCAGGGGTCGAACT+CGG | + | chr6_2:64309324-64309343 | Msa0923680:intron | 50.0% | |
| GCAGAAATCCACCACTTTGG+GGG | + | chr6_2:64309963-64309982 | Msa0923680:intron | 50.0% | |
| CTCCAAGAAGAGTCCACTAG+TGG | - | chr6_2:64310257-64310276 | None:intergenic | 50.0% | |
| TGGTGGAAATCGAAGGAGGC+CGG | + | chr6_2:64306282-64306301 | Msa0923680:CDS | 55.0% | |
| CGGTGCGCATGGTGTGTAAA+TGG | - | chr6_2:64306763-64306782 | None:intergenic | 55.0% | |
| TGGGGTCTAGCACAAGTGGT+CGG | - | chr6_2:64306783-64306802 | None:intergenic | 55.0% | |
| CTGAGTTCTGCAGGTAGCTG+TGG | - | chr6_2:64307524-64307543 | None:intergenic | 55.0% | |
| CACAGCTACCTGCAGAACTC+AGG | + | chr6_2:64307522-64307541 | Msa0923680:CDS | 55.0% | |
| ACTCCTTCCGCTAGGTCAAC+TGG | - | chr6_2:64307649-64307668 | None:intergenic | 55.0% | |
| TTCATGGTCCCCCAAAGTGG+TGG | - | chr6_2:64309974-64309993 | None:intergenic | 55.0% | |
| GGTGGAAATCGAAGGAGGCC+GGG | + | chr6_2:64306283-64306302 | Msa0923680:CDS | 60.0% | |
| GTGGAAATCGAAGGAGGCCG+GGG | + | chr6_2:64306284-64306303 | Msa0923680:CDS | 60.0% | |
| CCACTGGGGTCTAGCACAAG+TGG | - | chr6_2:64306787-64306806 | None:intergenic | 60.0% | |
| CCACTTGTGCTAGACCCCAG+TGG | + | chr6_2:64306784-64306803 | Msa0923680:intron | 60.0% | |
| CTCGGAGAACTCCTTCCGCT+AGG | - | chr6_2:64307657-64307676 | None:intergenic | 60.0% | |
| AGCCGAGTTCGACCCCTGAA+TGG | - | chr6_2:64309329-64309348 | None:intergenic | 60.0% | |
| ATTCAGGGGTCGAACTCGGC+TGG | + | chr6_2:64309328-64309347 | Msa0923680:intron | 60.0% | |
| AACTCGGCTGGAGCAGTCCT+TGG | + | chr6_2:64309340-64309359 | Msa0923680:intron | 60.0% | |
| ! | CGAAGGAGGCCGGGGAGTAT+TGG | + | chr6_2:64306292-64306311 | Msa0923680:CDS | 65.0% |
| !! | GAGGCCGGGGAGTATTGGAG+AGG | + | chr6_2:64306297-64306316 | Msa0923680:CDS | 65.0% |
| GCACAAGTGGTCGGTGCGCA+TGG | - | chr6_2:64306774-64306793 | None:intergenic | 65.0% | |
| GGCTGGAGCAGTCCTTGGCT+AGG | + | chr6_2:64309345-64309364 | Msa0923680:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 64306155 | 64310566 | 64306155 | ID=Msa0923680;Name=Msa0923680 |
| chr6_2 | mRNA | 64306155 | 64310566 | 64306155 | ID=Msa0923680-mRNA-1;Parent=Msa0923680;Name=Msa0923680-mRNA-1;_AED=0.11;_eAED=0.11;_QI=95|0.88|0.8|1|1|1|10|232|418 |
| chr6_2 | exon | 64306155 | 64306505 | 64306155 | ID=Msa0923680-mRNA-1:exon:10107;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64306598 | 64306704 | 64306598 | ID=Msa0923680-mRNA-1:exon:10108;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64307033 | 64307168 | 64307033 | ID=Msa0923680-mRNA-1:exon:10109;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64307447 | 64307543 | 64307447 | ID=Msa0923680-mRNA-1:exon:10110;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64307636 | 64307702 | 64307636 | ID=Msa0923680-mRNA-1:exon:10111;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64308147 | 64308245 | 64308147 | ID=Msa0923680-mRNA-1:exon:10112;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64308349 | 64308438 | 64308349 | ID=Msa0923680-mRNA-1:exon:10113;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64308706 | 64308860 | 64308706 | ID=Msa0923680-mRNA-1:exon:10114;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64309967 | 64310068 | 64309967 | ID=Msa0923680-mRNA-1:exon:10115;Parent=Msa0923680-mRNA-1 |
| chr6_2 | exon | 64310187 | 64310566 | 64310187 | ID=Msa0923680-mRNA-1:exon:10116;Parent=Msa0923680-mRNA-1 |
| chr6_2 | five_prime_UTR | 64306155 | 64306249 | 64306155 | ID=Msa0923680-mRNA-1:five_prime_utr;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64306250 | 64306505 | 64306250 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64306598 | 64306704 | 64306598 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64307033 | 64307168 | 64307033 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64307447 | 64307543 | 64307447 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64307636 | 64307702 | 64307636 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64308147 | 64308245 | 64308147 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64308349 | 64308438 | 64308349 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64308706 | 64308860 | 64308706 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64309967 | 64310068 | 64309967 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | CDS | 64310187 | 64310334 | 64310187 | ID=Msa0923680-mRNA-1:cds;Parent=Msa0923680-mRNA-1 |
| chr6_2 | three_prime_UTR | 64310335 | 64310566 | 64310335 | ID=Msa0923680-mRNA-1:three_prime_utr;Parent=Msa0923680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
