AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0939800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0939800 MtrunA17_Chr6g0455391 87.017 362 24 2 45 383 53 414 0.0 652
Msa0939800 MtrunA17_Chr6g0455401 77.929 367 52 3 45 382 54 420 0.0 585
Msa0939800 MtrunA17_Chr7g0219921 75.543 368 60 4 45 382 53 420 0.0 582
Msa0939800 MtrunA17_Chr2g0308381 70.866 381 76 6 32 382 51 426 0.0 555
Msa0939800 MtrunA17_Chr6g0455411 64.110 365 105 5 45 383 45 409 1.60e-174 493
Msa0939800 MtrunA17_Chr7g0219931 64.228 369 98 5 45 383 45 409 1.89e-174 493
Msa0939800 MtrunA17_Chr2g0333731 62.331 369 108 4 45 382 54 422 5.90e-173 489
Msa0939800 MtrunA17_Chr2g0308371 57.453 369 127 4 45 383 50 418 3.53e-157 449
Msa0939800 MtrunA17_Chr3g0145441 40.206 388 196 10 30 382 52 438 1.42e-100 306
Msa0939800 MtrunA17_Chr2g0319581 26.733 404 207 20 45 373 244 633 5.00e-28 115
Msa0939800 MtrunA17_Chr4g0068011 24.742 388 206 17 63 372 239 618 2.63e-26 110
Msa0939800 MtrunA17_Chr2g0294901 25.180 417 225 19 45 383 227 634 3.64e-25 107
Msa0939800 MtrunA17_Chr5g0394101 23.288 438 234 21 18 372 16 434 9.27e-21 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0939800 AT5G60920.1 68.108 370 86 4 45 382 62 431 0.0 541
Msa0939800 AT3G02210.1 70.461 369 77 5 45 382 59 426 0.0 540
Msa0939800 AT5G60920.2 68.108 370 86 4 45 382 15 384 0.0 539
Msa0939800 AT3G29810.1 68.579 366 87 5 44 382 53 417 0.0 534
Msa0939800 AT5G15630.3 64.110 365 105 5 45 383 10 374 5.71e-175 493
Msa0939800 AT5G15630.1 64.110 365 105 5 45 383 46 410 2.31e-174 493
Msa0939800 AT5G15630.4 63.989 361 104 5 49 383 1 361 5.27e-173 488
Msa0939800 AT5G15630.2 63.989 361 104 5 49 383 1 361 5.27e-173 488
Msa0939800 AT5G15630.5 64.706 289 83 3 45 314 46 334 5.36e-137 394
Msa0939800 AT1G09790.1 50.413 363 150 6 47 381 63 423 1.43e-123 364
Msa0939800 AT1G09790.2 50.413 363 150 6 47 381 52 412 1.61e-123 364
Msa0939800 AT5G60950.1 55.414 157 68 1 45 201 48 202 1.84e-57 186
Msa0939800 AT4G16120.1 24.654 434 238 20 18 372 207 630 1.88e-26 111
Msa0939800 AT5G49270.1 23.210 405 223 17 47 372 236 631 1.49e-22 100
Msa0939800 AT4G27110.1 23.908 435 247 22 13 372 204 629 1.01e-20 94.4
Msa0939800 AT3G16860.1 21.689 438 257 19 12 372 194 622 1.29e-20 94.4
Msa0939800 AT3G20580.1 23.969 388 206 17 63 372 263 639 6.77e-19 89.0

Find 205 sgRNAs with CRISPR-Local

Find 1035 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCACAAAGTTTACTTTAA+TGG 0.101746 6_3:-11944277 Msa0939800:five_prime_UTR
AATGCTGAAACTGCATTTAT+TGG 0.135761 6_3:+11932909 None:intergenic
ACATGCCAGTGAACCCTAAT+TGG 0.184504 6_3:+11944926 None:intergenic
AGTCTTGCAGGGGCAGAATT+AGG 0.194146 6_3:+11944211 None:intergenic
AATGGTTCATTGTCTTTCTT+TGG 0.197526 6_3:+11944974 None:intergenic
TGCAAGACTAGTTACCTTTA+AGG 0.202982 6_3:-11944197 Msa0939800:five_prime_UTR
TTTGCAATTTGTTGATTATA+AGG 0.214928 6_3:+11932972 None:intergenic
TGAGAAGATGAGTGCCTTAA+AGG 0.220412 6_3:+11944183 None:intergenic
TCCGAAGAATTTCACTCTTT+TGG 0.224509 6_3:-11945730 Msa0939800:five_prime_UTR
GGGCAAATAACGAGGTAATA+TGG 0.235292 6_3:-11933106 Msa0939800:CDS
TGAGTCAGATTGTAAAAGTT+TGG 0.259277 6_3:+11931572 None:intergenic
GGAGATTGTTCAAAATTTAA+AGG 0.262010 6_3:-11933053 Msa0939800:CDS
CTCATCATATGTGCCCAATT+AGG 0.268750 6_3:-11944940 Msa0939800:five_prime_UTR
ATTCGTCCTGTAGTTGAAAT+TGG 0.270485 6_3:+11931625 None:intergenic
TGAGTCTTGCGGCGCCTATC+AGG 0.275487 6_3:+11945645 None:intergenic
ACAGGATGAATTACTCTCTT+TGG 0.276733 6_3:-11944847 Msa0939800:five_prime_UTR
CAGATGATGCAACAATGATT+TGG 0.278576 6_3:-11931104 Msa0939800:CDS
TATTGATTTGTAGTTGAAAC+TGG 0.300314 6_3:+11931544 None:intergenic
TTGATTGTTATGTTTCCATT+TGG 0.310173 6_3:+11946569 None:intergenic
TCTGGTGTTATGTATTTAGT+AGG 0.312688 6_3:+11932771 None:intergenic
AAACTCACTTATGGATTGAT+AGG 0.320707 6_3:+11944751 None:intergenic
CGGTCACGAATTTCAATTAC+AGG 0.321388 6_3:-11944865 Msa0939800:five_prime_UTR
AGATGATGCAACAATGATTT+GGG 0.331004 6_3:-11931103 Msa0939800:CDS
TTAAAGGTAACTAGTCTTGC+AGG 0.331622 6_3:+11944199 None:intergenic
TCATCATATGTGCCCAATTA+GGG 0.335778 6_3:-11944939 Msa0939800:five_prime_UTR
CATAGTTGCTTATGATCCTT+TGG 0.336115 6_3:-11946594 Msa0939800:intron
GGGAGAAAAGGGTAGGTATC+AGG 0.339439 6_3:+11944232 None:intergenic
AAGTTTAACCGTTCGGTTTG+TGG 0.342669 6_3:+11945752 None:intergenic
TGTAATGGTTTCATTGTAGA+AGG 0.344689 6_3:+11945180 None:intergenic
GAATGATTTACTCATTCATT+AGG 0.346685 6_3:+11930901 None:intergenic
GATGACACTGGCATGTTCTA+TGG 0.348374 6_3:-11944415 Msa0939800:five_prime_UTR
TCATTATGTGTCGAAACATT+TGG 0.349018 6_3:+11946048 None:intergenic
AAGTAAAACTCTTATCCTTT+CGG 0.352736 6_3:+11931010 None:intergenic
GTCTTGCAGGGGCAGAATTA+GGG 0.367339 6_3:+11944212 None:intergenic
TGTGTGACATTGTTAAGATT+TGG 0.368115 6_3:+11944806 None:intergenic
TCTGATTGAATATTTCCCTT+TGG 0.369513 6_3:+11944355 None:intergenic
GATGGTCATTAGGATGGAAT+TGG 0.371382 6_3:-11933127 Msa0939800:CDS
CCTATCAGGTGTAAGGAAAT+TGG 0.371740 6_3:+11945659 None:intergenic
ATACTTCAATGATCTACTAA+TGG 0.379941 6_3:-11944386 Msa0939800:five_prime_UTR
ATGAATCCGGGATGGACATT+AGG 0.393954 6_3:-11946029 Msa0939800:five_prime_UTR
TCGGCACCTGGATGGTCATT+AGG 0.394891 6_3:-11933137 Msa0939800:CDS
GCATGTGAAGACTAACTATA+AGG 0.401581 6_3:-11944909 Msa0939800:five_prime_UTR
CGCCATTGAAATAGATCCTC+CGG 0.403954 6_3:+11930965 None:intergenic
ACGGTCGTAGATTTACTTCC+TGG 0.404095 6_3:-11932999 Msa0939800:CDS
AACGAATAGTACCACGCCTT+TGG 0.406614 6_3:-11931738 Msa0939800:intron
ATGGAAACATAACAATCAAA+TGG 0.407716 6_3:-11946565 Msa0939800:five_prime_UTR
CTGATTGAGCTGAGTTGCCC+TGG 0.409314 6_3:+11932050 None:intergenic
AGATCCTGCAGAAGCTATAT+CGG 0.411992 6_3:-11945805 Msa0939800:five_prime_UTR
ATGTGCCAGTGAACTTGAAT+AGG 0.415187 6_3:+11931692 None:intergenic
GTTTCGACACATAATGAATC+CGG 0.417994 6_3:-11946042 Msa0939800:five_prime_UTR
GGGCTAAGAAAGAAGTAATA+TGG 0.424928 6_3:-11945998 Msa0939800:five_prime_UTR
AGTGAAATCTTACTCTATAC+AGG 0.430147 6_3:+11932024 None:intergenic
CAGGGCAACTCAGCTCAATC+AGG 0.430296 6_3:-11932049 Msa0939800:CDS
GGCAAATAACGAGGTAATAT+GGG 0.431111 6_3:-11933105 Msa0939800:CDS
GGTTTGGAGTTATAATTTAG+TGG 0.436118 6_3:+11946820 None:intergenic
CCAATTTCCTTACACCTGAT+AGG 0.438006 6_3:-11945659 Msa0939800:five_prime_UTR
ATGGGCCATCGTGGGAGGTC+AGG 0.439872 6_3:-11933087 Msa0939800:CDS
ACTTACTCAGCTAGGGTTTG+TGG 0.441055 6_3:-11935012 Msa0939800:intron
CCCCGGAGGATCTATTTCAA+TGG 0.443193 6_3:-11930967 Msa0939800:CDS
CTTACTCAGCTAGGGTTTGT+GGG 0.445001 6_3:-11935011 Msa0939800:intron
CTCATGCAAGCCGGTCCTAC+TGG 0.447413 6_3:-11931057 Msa0939800:CDS
GACATGTTCATGCAGCTGCC+AGG 0.447709 6_3:-11932068 Msa0939800:CDS
GTAGGTTTCTAACAACCATT+TGG 0.448372 6_3:-11946925 None:intergenic
GTTCTAGGGAATTCTAGTTA+TGG 0.449811 6_3:+11946894 None:intergenic
TCTTCGGAAGTTTAACCGTT+CGG 0.451217 6_3:+11945745 None:intergenic
CAAGTTAGTGTTGGACAAGC+TGG 0.455458 6_3:-11945777 Msa0939800:five_prime_UTR
AATTTCACCTTGCAAGCACC+TGG 0.457709 6_3:-11932831 Msa0939800:CDS
TATGATCCTTTGGATCCAAA+TGG 0.458909 6_3:-11946584 Msa0939800:five_prime_UTR
CAAGTCAGCGTCGGTGGAGC+TGG 0.459204 6_3:-11932885 Msa0939800:CDS
GCCAAAAGAGTGAAATTCTT+CGG 0.461099 6_3:+11945729 None:intergenic
TTTGTGAACTGTTGATTGTA+AGG 0.462544 6_3:+11945864 None:intergenic
GGCAGCTGCATGAACATGTC+GGG 0.464797 6_3:+11932071 None:intergenic
CTTGTGTTAGTCTCTTATGC+AGG 0.468104 6_3:-11946709 Msa0939800:intron
CCAACGTTATCGTCATATAT+CGG 0.469571 6_3:-11933156 Msa0939800:CDS
GTACTTACCACATAACCATC+TGG 0.470755 6_3:+11946524 None:intergenic
CATGCCAGTGAACCCTAATT+GGG 0.473173 6_3:+11944927 None:intergenic
ACAGGACGAATTACTCAGAT+TGG 0.476930 6_3:-11931613 Msa0939800:CDS
GCTGCATGAACATGTCGGGC+AGG 0.483922 6_3:+11932075 None:intergenic
AAAGGGTAGGTATCAGGTGG+AGG 0.487206 6_3:+11944238 None:intergenic
ATCTTAACGACAAGGAGTAT+TGG 0.490277 6_3:-11931667 Msa0939800:CDS
GGGGCAGAATTAGGGAGAAA+AGG 0.491941 6_3:+11944220 None:intergenic
CTGTTACCAATTTCAACTAC+AGG 0.493146 6_3:-11931631 Msa0939800:CDS
AATACATAACACCAGACAAA+AGG 0.493782 6_3:-11932764 Msa0939800:CDS
TGATGAGTGCATTGCATCAA+TGG 0.493981 6_3:+11944956 None:intergenic
TGGAAACATAACAATCAAAT+GGG 0.494010 6_3:-11946564 Msa0939800:five_prime_UTR
CAAGGAGTATTGGCGCGTAA+AGG 0.495517 6_3:-11931657 Msa0939800:CDS
ATGTTTCCATTTGGATCCAA+AGG 0.499015 6_3:+11946578 None:intergenic
GGGCAGAATTAGGGAGAAAA+GGG 0.502737 6_3:+11944221 None:intergenic
CAAATTGCAAATTGTTGCAA+AGG 0.503458 6_3:-11932960 Msa0939800:CDS
CCTTCACATTCAAGCAAGGA+TGG 0.510651 6_3:-11944306 Msa0939800:five_prime_UTR
GGGAGAAGGTCTACAACTGT+AGG 0.515221 6_3:+11945894 None:intergenic
CCTTGTCCCTCCTGCGCATG+TGG 0.516413 6_3:-11945157 Msa0939800:five_prime_UTR
TGAACAATCTCCTTGTTCTG+TGG 0.517037 6_3:+11945956 None:intergenic
ATGGTCATTAGGATGGAATT+GGG 0.517230 6_3:-11933126 Msa0939800:CDS
AATGTATAGTATTGTAGAGA+AGG 0.518003 6_3:+11946862 None:intergenic
GAATTACTCAGATTGGAACT+TGG 0.521426 6_3:-11931606 Msa0939800:CDS
GTTATGGCTTACTCACCAAA+TGG 0.521450 6_3:+11946910 None:intergenic
TTGGCAGCCACATGCGCAGG+AGG 0.526832 6_3:+11945150 None:intergenic
AGGTGGAGTCGTTTCAGCAT+GGG 0.528195 6_3:-11945832 Msa0939800:five_prime_UTR
CCTGGACCTGGTTATACTTG+TGG 0.530570 6_3:-11945705 Msa0939800:five_prime_UTR
GCTAGGGTTTGTGGGAGAGA+TGG 0.530683 6_3:-11935003 Msa0939800:CDS
GAAGACGAGTGAGATGAGTG+TGG 0.531232 6_3:-11934934 Msa0939800:CDS
AATGATCTACTAATGGAAGC+TGG 0.531281 6_3:-11944379 Msa0939800:five_prime_UTR
CATTATTATGCAGATGACAC+TGG 0.531475 6_3:-11944427 Msa0939800:intron
GAAGTAATATGGTCTGTGAC+AGG 0.532425 6_3:-11945987 Msa0939800:five_prime_UTR
CAGTTCACAAACTGTTGTAA+AGG 0.533555 6_3:-11945852 Msa0939800:five_prime_UTR
TCAAATGGGATATTATGTCT+TGG 0.533661 6_3:-11946550 Msa0939800:five_prime_UTR
AGACTAACTATAAGGACTAT+TGG 0.533923 6_3:-11944901 Msa0939800:five_prime_UTR
GGAGATTGTTCAAAATTCAA+AGG 0.535719 6_3:-11945945 Msa0939800:five_prime_UTR
CGGTCGTAGATTTACTTCCT+GGG 0.537810 6_3:-11932998 Msa0939800:CDS
ACATGTTCATGCAGCTGCCA+GGG 0.538326 6_3:-11932067 Msa0939800:CDS
ACCTTGCAAGCACCTGGACC+AGG 0.539849 6_3:-11932825 Msa0939800:CDS
GCTGGCCCGCATGTATAACC+TGG 0.540849 6_3:+11932807 None:intergenic
CTAATGGAAGCTGGACCAAA+GGG 0.542706 6_3:-11944370 Msa0939800:five_prime_UTR
TGTGCCCAATTAGGGTTCAC+TGG 0.543791 6_3:-11944931 Msa0939800:five_prime_UTR
GCATTTCAAGTCAGCGTCGG+TGG 0.544000 6_3:-11932891 Msa0939800:CDS
ACCTGGTCCAGGTGCTTGCA+AGG 0.545971 6_3:+11932824 None:intergenic
TACTCAATGCTTGAGTCTTG+CGG 0.546090 6_3:+11945634 None:intergenic
GAGAGAGCGACGCAACAAGT+TGG 0.547637 6_3:+11932124 None:intergenic
AAGACGAGTGAGATGAGTGT+GGG 0.549779 6_3:-11934933 Msa0939800:CDS
ATGGATTGATAGGGAAGAAG+TGG 0.549902 6_3:+11944761 None:intergenic
GATAAAGATACACAGCAACT+TGG 0.551191 6_3:+11945205 None:intergenic
TGTTGATTATAAGGCGTCCC+AGG 0.551344 6_3:+11932981 None:intergenic
TGTGTCCTATTCAAGTTCAC+TGG 0.552904 6_3:-11931697 Msa0939800:CDS
GTCCATCCTAATGTCCATCC+CGG 0.554834 6_3:+11946023 None:intergenic
CTGTACATTACCAGTAGGAC+CGG 0.554977 6_3:+11931047 None:intergenic
CACCTGGATGGTCATTAGGA+TGG 0.555076 6_3:-11933133 Msa0939800:CDS
GCCATTGAAATAGATCCTCC+GGG 0.557266 6_3:+11930966 None:intergenic
AGAAAAGGGTAGGTATCAGG+TGG 0.557270 6_3:+11944235 None:intergenic
TTCCATCCTAATGACCATCC+AGG 0.562010 6_3:+11933131 None:intergenic
ACTAATGGAAGCTGGACCAA+AGG 0.563542 6_3:-11944371 Msa0939800:five_prime_UTR
AAGGTGGAGTCGTTTCAGCA+TGG 0.564539 6_3:-11945833 Msa0939800:five_prime_UTR
GTCATATATCGGCACCTGGA+TGG 0.565403 6_3:-11933145 Msa0939800:CDS
ATTGCAAATTGTTGCAAAGG+CGG 0.568025 6_3:-11932957 Msa0939800:CDS
ACTCATTCATTAGGCAACCA+TGG 0.568095 6_3:+11930910 None:intergenic
CATGGATAAGCATCAGTTGG+TGG 0.568328 6_3:+11930928 None:intergenic
TGGCAGCTGCATGAACATGT+CGG 0.570980 6_3:+11932070 None:intergenic
TTGGGGAGTTAAATTCTACA+AGG 0.571215 6_3:-11931085 Msa0939800:CDS
GCAGGAGGGACAAGGTGTAA+TGG 0.573249 6_3:+11945165 None:intergenic
CCACATGCGCAGGAGGGACA+AGG 0.573307 6_3:+11945157 None:intergenic
ACAGTTGTAGACCTTCTCCC+TGG 0.573788 6_3:-11945891 Msa0939800:five_prime_UTR
GGAGCTCAAACCACAGAACA+AGG 0.574329 6_3:-11945966 Msa0939800:five_prime_UTR
CCGCATGTATAACCTGGTCC+AGG 0.574573 6_3:+11932813 None:intergenic
TAAAGGTAACTAGTCTTGCA+GGG 0.575314 6_3:+11944200 None:intergenic
TTTATTATTATGCAGTGACA+TGG 0.579365 6_3:-11945270 Msa0939800:intron
AACCATGGATAAGCATCAGT+TGG 0.580773 6_3:+11930925 None:intergenic
GGAGGTCAGGCAACTGAACA+AGG 0.581194 6_3:-11933074 Msa0939800:CDS
CCACAAGTATAACCAGGTCC+AGG 0.582035 6_3:+11945705 None:intergenic
ATCAGGTGTAAGGAAATTGG+TGG 0.582540 6_3:+11945662 None:intergenic
GGAAGTAAATCTACGACCGT+TGG 0.583414 6_3:+11933002 None:intergenic
AAAGCCGATATAGCTTCTGC+AGG 0.584674 6_3:+11945801 None:intergenic
TTTCGACACATAATGAATCC+GGG 0.587226 6_3:-11946041 Msa0939800:five_prime_UTR
AGAGATGGAGACAAATGAAG+AGG 0.587608 6_3:-11934988 Msa0939800:CDS
AAAGGGAAATATTCAATCAG+AGG 0.588184 6_3:-11944353 Msa0939800:five_prime_UTR
ATTATGTCTTGGACACCAGA+TGG 0.588570 6_3:-11946539 Msa0939800:five_prime_UTR
AACTCACTTATGGATTGATA+GGG 0.589286 6_3:+11944752 None:intergenic
CTGCATGAACATGTCGGGCA+GGG 0.590524 6_3:+11932076 None:intergenic
CGAGGTAATATGGGCCATCG+TGG 0.591244 6_3:-11933096 Msa0939800:CDS
ATCCGGGATGGACATTAGGA+TGG 0.594947 6_3:-11946025 Msa0939800:five_prime_UTR
GGAGAAGGTCTACAACTGTA+GGG 0.599520 6_3:+11945895 None:intergenic
TAGCTCTAAGATTCTGAGCA+TGG 0.600634 6_3:-11945011 Msa0939800:five_prime_UTR
TGTTGATTGTAAGGTACACC+AGG 0.602245 6_3:+11945873 None:intergenic
TAACACATTATTCATCAATG+AGG 0.606661 6_3:-11946756 Msa0939800:five_prime_UTR
CTTCACATTCAAGCAAGGAT+GGG 0.608150 6_3:-11944305 Msa0939800:five_prime_UTR
AGTGTGGGTTTCGAGTTCGA+TGG 0.609496 6_3:-11934918 Msa0939800:CDS
CTGGACCAGGTTATACATGC+GGG 0.609953 6_3:-11932812 Msa0939800:CDS
GTTCGATGGAGAGTTAGAGA+AGG 0.610274 6_3:-11934904 Msa0939800:CDS
TAGAAATTGTGAGTATGTGC+AGG 0.612076 6_3:+11945240 None:intergenic
TGTAAGGTACACCAGGGAGA+AGG 0.612287 6_3:+11945880 None:intergenic
TTCACAAACTGTTGTAAAGG+TGG 0.614474 6_3:-11945849 Msa0939800:five_prime_UTR
AGAATTAGGGAGAAAAGGGT+AGG 0.614482 6_3:+11944225 None:intergenic
CCATTAAAGTAAACTTTGTG+AGG 0.615298 6_3:+11944277 None:intergenic
GGTGGAGTCGTTTCAGCATG+GGG 0.615934 6_3:-11945831 Msa0939800:five_prime_UTR
TCTAAGATTCTGAGCATGGT+GGG 0.618501 6_3:-11945007 Msa0939800:five_prime_UTR
GCAGGGCCACAAGTATAACC+AGG 0.619293 6_3:+11945699 None:intergenic
AGCTGGTACCACAAACCGAA+CGG 0.619895 6_3:-11945760 Msa0939800:five_prime_UTR
CCGATATATGACGATAACGT+TGG 0.620173 6_3:+11933156 None:intergenic
TCAGCATTTCAAGTCAGCGT+CGG 0.622176 6_3:-11932894 Msa0939800:CDS
GATGGACATTAGGATGGACA+TGG 0.623160 6_3:-11946019 Msa0939800:five_prime_UTR
GAGGTAATATGGGCCATCGT+GGG 0.625482 6_3:-11933095 Msa0939800:CDS
CTCTAAGATTCTGAGCATGG+TGG 0.625735 6_3:-11945008 Msa0939800:five_prime_UTR
TATCGTCATATATCGGCACC+TGG 0.629206 6_3:-11933149 Msa0939800:CDS
GACACATAATGAATCCGGGA+TGG 0.630209 6_3:-11946037 Msa0939800:five_prime_UTR
GTAATATGGGCCATCGTGGG+AGG 0.630484 6_3:-11933092 Msa0939800:CDS
TGACTAGTACATTGAACCAA+AGG 0.632886 6_3:+11931722 None:intergenic
AAGGATTTACTCATGCAAGC+CGG 0.633291 6_3:-11931066 Msa0939800:CDS
TGGCAGCCACATGCGCAGGA+GGG 0.634044 6_3:+11945151 None:intergenic
GATACCTTCACATTCAAGCA+AGG 0.634149 6_3:-11944310 Msa0939800:five_prime_UTR
TCTAACTGTACATTACCAGT+AGG 0.636191 6_3:+11931042 None:intergenic
TTGGACACCAGATGGTTATG+TGG 0.650667 6_3:-11946531 Msa0939800:intron
AGTTGCCTGACCTCCCACGA+TGG 0.651134 6_3:+11933082 None:intergenic
TGAATTGATGCATAAAGTGT+CGG 0.654613 6_3:-11944136 Msa0939800:five_prime_UTR
CACCAACTGATGCTTATCCA+TGG 0.655108 6_3:-11930927 Msa0939800:CDS
GGTGTAAGGAAATTGGTGGA+AGG 0.658633 6_3:+11945666 None:intergenic
CCATCCTTGCTTGAATGTGA+AGG 0.664681 6_3:+11944306 None:intergenic
CCTGGACCAGGTTATACATG+CGG 0.667071 6_3:-11932813 Msa0939800:CDS
GATGATGCAACAATGATTTG+GGG 0.676545 6_3:-11931102 Msa0939800:CDS
AAAGGTAACTAGTCTTGCAG+GGG 0.678000 6_3:+11944201 None:intergenic
ATGGAATTGGGCAAATAACG+AGG 0.683644 6_3:-11933114 Msa0939800:CDS
ATGGACATTAGGATGGACAT+GGG 0.698791 6_3:-11946018 Msa0939800:five_prime_UTR
GCACATTAATCTTAACGACA+AGG 0.710677 6_3:-11931675 Msa0939800:CDS
AGTACATTGAACCAAAGGCG+TGG 0.728539 6_3:+11931727 None:intergenic
GTTGATTGTAAGGTACACCA+GGG 0.744782 6_3:+11945874 None:intergenic
CCATTGAAATAGATCCTCCG+GGG 0.745449 6_3:+11930967 None:intergenic
CTATTGGCGAGTCAAAATCG+CGG 0.793209 6_3:-11944885 Msa0939800:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATAATAATTTTTTTTT+AGG - chr6_3:11938798-11938817 Msa0939800:intron 0.0%
!!! AAAATAATAATTTTTTTTTA+GGG - chr6_3:11938799-11938818 Msa0939800:intron 0.0%
!!! ATTTTTTTTTAAAATAAAAT+TGG + chr6_3:11939391-11939410 None:intergenic 0.0%
!! AAATGAAAAAATATATATTG+AGG + chr6_3:11931028-11931047 None:intergenic 10.0%
!! ATAATAAAATAATAACAAAG+GGG + chr6_3:11932542-11932561 None:intergenic 10.0%
!! TCTTTAATAAGTAATTTATA+AGG + chr6_3:11938404-11938423 None:intergenic 10.0%
!!! TACTTTATTTTTTGATTTTT+TGG + chr6_3:11938656-11938675 None:intergenic 10.0%
!!! AAAAAAAAAGTATATTTAGT+TGG + chr6_3:11938733-11938752 None:intergenic 10.0%
!!! TTTATATATTATCATTTTAG+AGG - chr6_3:11939251-11939270 Msa0939800:intron 10.0%
!!! GATGATATATTTTTATTTTA+AGG - chr6_3:11939507-11939526 Msa0939800:intron 10.0%
!!! CATTTTAAAACAATTTTTTT+AGG - chr6_3:11940435-11940454 Msa0939800:intron 10.0%
!! ACACAAAAAAAATATATAAT+TGG + chr6_3:11940889-11940908 Msa0939810:intron 10.0%
!!! AAATTATTTTTGTTTTTGTT+TGG + chr6_3:11942790-11942809 Msa0939810:CDS 10.0%
!!! GTAATAATTTTATCATTTTT+AGG - chr6_3:11945525-11945544 Msa0939800:intron 10.0%
!! AAAAAATATATATTGAGGTT+TGG + chr6_3:11931023-11931042 None:intergenic 15.0%
!!! CTTTTAAATAAACACTTAAA+GGG + chr6_3:11931600-11931619 None:intergenic 15.0%
!!! ACTTTTAAATAAACACTTAA+AGG + chr6_3:11931601-11931620 None:intergenic 15.0%
!!! GATTATGCATTTTTTTTATT+AGG - chr6_3:11931731-11931750 Msa0939800:CDS 15.0%
!! CAAAATTATTTAATCATTGT+TGG - chr6_3:11932775-11932794 Msa0939800:CDS 15.0%
!!! TTTGTAATTTCGATTTATTT+TGG + chr6_3:11933196-11933215 None:intergenic 15.0%
!!! TTGTAATTTTAATACATTCA+AGG - chr6_3:11933292-11933311 Msa0939800:intron 15.0%
!!! TGTAATTTTAATACATTCAA+GGG - chr6_3:11933293-11933312 Msa0939800:intron 15.0%
!!! TGTGAAAATATTATGTTTTT+TGG + chr6_3:11934113-11934132 None:intergenic 15.0%
!!! ATAATATTTTCACACTAAAT+AGG - chr6_3:11934119-11934138 Msa0939800:intron 15.0%
!!! TAATATTTTCACACTAAATA+GGG - chr6_3:11934120-11934139 Msa0939800:intron 15.0%
!!! TCAAATTTTACTTTTGATAA+AGG + chr6_3:11934663-11934682 None:intergenic 15.0%
!!! TTGCTATTTTGAAAATTTTA+GGG + chr6_3:11935384-11935403 None:intergenic 15.0%
!!! ATTGCTATTTTGAAAATTTT+AGG + chr6_3:11935385-11935404 None:intergenic 15.0%
!! GTAAATAATATCTTTCTTAA+AGG - chr6_3:11935714-11935733 Msa0939800:intron 15.0%
!!! TTTATGATTAAGTTTAAAAC+TGG + chr6_3:11935765-11935784 None:intergenic 15.0%
!!! AACAAAATTGTTTTTTTTTG+TGG + chr6_3:11937562-11937581 None:intergenic 15.0%
!!! AGTTGGAATTTTTTTTAAAT+AGG + chr6_3:11938585-11938604 None:intergenic 15.0%
!!! TTTTTTTAACAATAGTTTGA+AGG + chr6_3:11938884-11938903 None:intergenic 15.0%
!! TATATATATATATGTGCAAA+TGG + chr6_3:11939065-11939084 None:intergenic 15.0%
!!! AAAATTTTGATATTTATGTG+AGG + chr6_3:11939346-11939365 None:intergenic 15.0%
!!! TCTATATATTGTTATTTTAG+TGG + chr6_3:11940104-11940123 Msa0939810:CDS 15.0%
!! ACAAAATTAAACAATTTAAC+TGG - chr6_3:11940139-11940158 Msa0939800:intron 15.0%
!! TAAGATATGAAAAATGTTAA+CGG + chr6_3:11940183-11940202 Msa0939810:intron 15.0%
!!! TAAGTTTTAAATAACAATTG+CGG - chr6_3:11941204-11941223 Msa0939800:intron 15.0%
!!! AGAAACATTTTACTATTTAA+TGG - chr6_3:11941703-11941722 Msa0939800:intron 15.0%
!!! TATTTTAGTTTATTTCATAG+CGG + chr6_3:11941818-11941837 Msa0939810:CDS 15.0%
!!! TTTTTTTTCCTTCTATTTTT+AGG + chr6_3:11942073-11942092 Msa0939810:intron 15.0%
!!! TTTAACACATTATATCATTT+TGG + chr6_3:11942275-11942294 Msa0939810:CDS 15.0%
!!! ATTAATTTCGTTTTTTGATT+TGG + chr6_3:11942733-11942752 Msa0939810:CDS 15.0%
!!! ATGTCTGTAATTTTTAAATA+AGG - chr6_3:11943045-11943064 Msa0939800:intron 15.0%
!!! TAATTTTTAAATAAGGTCAA+GGG - chr6_3:11943052-11943071 Msa0939800:intron 15.0%
!!! ATATATGATTTTCTTCTAAA+CGG - chr6_3:11945830-11945849 Msa0939800:five_prime_UTR 15.0%
!! AAATATAAAACAAGTAGCAA+TGG + chr6_3:11931331-11931350 None:intergenic 20.0%
!! TATATAGTTAGAGAATTGTT+TGG - chr6_3:11931375-11931394 Msa0939800:intron 20.0%
!!! TTTTTCGATTTTTTTTCTTC+AGG + chr6_3:11931536-11931555 None:intergenic 20.0%
!! TAAAATAAGTCAATTCAAAG+AGG - chr6_3:11931685-11931704 Msa0939800:CDS 20.0%
!! AAAAATGCATAATCACAATT+AGG + chr6_3:11931725-11931744 None:intergenic 20.0%
!! TACAAAATGTTATCAAATAG+CGG + chr6_3:11932344-11932363 None:intergenic 20.0%
!!! AAAGAAGAAAATCGTAATTT+TGG + chr6_3:11933351-11933370 None:intergenic 20.0%
!! ATAATGATAACATGCTTAAA+TGG + chr6_3:11933383-11933402 None:intergenic 20.0%
!!! TTATGGATATAAGTTGAAAA+CGG + chr6_3:11934036-11934055 None:intergenic 20.0%
!! TGTTAAACATGATTTATGAT+AGG + chr6_3:11934182-11934201 None:intergenic 20.0%
!! ATAAATCATGTTTAACATTG+AGG - chr6_3:11934185-11934204 Msa0939800:intron 20.0%
!! CTATGTAATGATGTATTTAT+TGG + chr6_3:11934269-11934288 None:intergenic 20.0%
!! CAATAAATACATCATTACAT+AGG - chr6_3:11934267-11934286 Msa0939800:intron 20.0%
!!! TATGATTTGTTTCTTAGTTT+CGG + chr6_3:11934333-11934352 None:intergenic 20.0%
!! AAACTAAGAAACAAATCATA+GGG - chr6_3:11934333-11934352 Msa0939800:intron 20.0%
!!! TTTTACTTTTGATAAAGGTT+GGG + chr6_3:11934658-11934677 None:intergenic 20.0%
!!! ATTTTACTTTTGATAAAGGT+TGG + chr6_3:11934659-11934678 None:intergenic 20.0%
!! AAGTAAAATTTGAATCCTTT+CGG - chr6_3:11934670-11934689 Msa0939800:intron 20.0%
!! AAAGAAATATAATGTTTGCA+CGG - chr6_3:11934790-11934809 Msa0939800:intron 20.0%
!! ACTTAATTGAATATAGTGTA+TGG + chr6_3:11934915-11934934 None:intergenic 20.0%
!! AATGCAAAATATCAAATTTG+AGG - chr6_3:11935433-11935452 Msa0939800:intron 20.0%
!! ATGCAAAATATCAAATTTGA+GGG - chr6_3:11935434-11935453 Msa0939800:intron 20.0%
!!! AGTTTTCAGTATAATTATCT+AGG + chr6_3:11935917-11935936 None:intergenic 20.0%
!! GATAATTATACTGAAAACTT+AGG - chr6_3:11935918-11935937 Msa0939800:intron 20.0%
!!! GAATGTTTTCTAATATTGAT+CGG - chr6_3:11936526-11936545 Msa0939800:intron 20.0%
!! TTTCACTTAATTACAATTTG+TGG + chr6_3:11936675-11936694 None:intergenic 20.0%
!! GTGATTCTATGTTAATATTA+AGG + chr6_3:11936920-11936939 None:intergenic 20.0%
!! TTCTTATATTTATGTAATGC+AGG + chr6_3:11937681-11937700 None:intergenic 20.0%
!! TGCATTACATAAATATAAGA+AGG - chr6_3:11937680-11937699 Msa0939800:intron 20.0%
!! ATAAACTTTGATGAAATTTC+TGG + chr6_3:11938121-11938140 None:intergenic 20.0%
!!! ATTGAATGTACATTTTTGTT+TGG - chr6_3:11938239-11938258 Msa0939800:intron 20.0%
!!! TGATTCATCTACAATATTTT+GGG + chr6_3:11938455-11938474 None:intergenic 20.0%
!!! TTGATTCATCTACAATATTT+TGG + chr6_3:11938456-11938475 None:intergenic 20.0%
!!! TTGGAACAAAGAATTTTAAA+AGG + chr6_3:11938637-11938656 None:intergenic 20.0%
!! AACTATTGTTAAAAAAACCT+TGG - chr6_3:11938887-11938906 Msa0939800:intron 20.0%
!! TATGCATTACTTATAAGATA+AGG - chr6_3:11939031-11939050 Msa0939800:intron 20.0%
!! TTTACACATTAAATGAATCT+CGG - chr6_3:11939425-11939444 Msa0939800:intron 20.0%
!! AAACAAATCAATAGTTGATT+AGG + chr6_3:11940308-11940327 Msa0939810:intron 20.0%
!!! AAATGACACTCATTTTAAAA+CGG - chr6_3:11940461-11940480 Msa0939800:intron 20.0%
!! GTTAAAAAAATTACTCACAT+TGG - chr6_3:11940521-11940540 Msa0939800:intron 20.0%
!!! TTGTGTGTGTTTTATTTTAA+TGG - chr6_3:11940903-11940922 Msa0939800:intron 20.0%
!!! TATTTAAAACTTAGACCTTA+GGG + chr6_3:11941197-11941216 Msa0939810:CDS 20.0%
!!! TTATTTAAAACTTAGACCTT+AGG + chr6_3:11941198-11941217 Msa0939810:CDS 20.0%
!! CAGTATATTATAGAGTTTAA+TGG - chr6_3:11941483-11941502 Msa0939800:intron 20.0%
!!! TTTTGAAGTATTTGTACAAT+TGG + chr6_3:11941927-11941946 Msa0939810:intron 20.0%
!! TAAATCATCAATAATTGACT+CGG - chr6_3:11942231-11942250 Msa0939800:intron 20.0%
!!! TTTTGATTAAAAGATTCTAC+AGG - chr6_3:11942442-11942461 Msa0939800:intron 20.0%
!! GAAATTAATCAACAAACAAT+AGG - chr6_3:11942744-11942763 Msa0939800:intron 20.0%
!!! GTAATTTTTAAATAAGGTCA+AGG - chr6_3:11943051-11943070 Msa0939800:intron 20.0%
!!! ATGTATTTTCACGAAAATAA+TGG - chr6_3:11943079-11943098 Msa0939800:intron 20.0%
!!! TGTATTTTCACGAAAATAAT+GGG - chr6_3:11943080-11943099 Msa0939800:intron 20.0%
!!! TTTGCAATTTGTTGATTATA+AGG + chr6_3:11944855-11944874 None:intergenic 20.0%
!! GAAAATTATACTGAAAACTT+AGG + chr6_3:11945132-11945151 None:intergenic 20.0%
!!! AGTTTTCAGTATAATTTTCT+AGG - chr6_3:11945133-11945152 Msa0939800:five_prime_UTR 20.0%
!!! CAAAATTTGGTTTAAGTAAT+AGG + chr6_3:11945445-11945464 None:intergenic 20.0%
!!! TTTAGGATTAAGTTTAAAAC+TGG - chr6_3:11945542-11945561 Msa0939800:intron 20.0%
!! ATCATAATATCTTTCTGATA+GGG + chr6_3:11945593-11945612 None:intergenic 20.0%
!! AATCATAATATCTTTCTGAT+AGG + chr6_3:11945594-11945613 None:intergenic 20.0%
!! AAAAAATCAGAGTAATGTTA+AGG + chr6_3:11945625-11945644 None:intergenic 20.0%
!!! AGTTTGTGTAAAATTTTTCA+AGG - chr6_3:11946307-11946326 Msa0939800:intron 20.0%
!!! TTTTACTTTCGATAAAGATT+GGG - chr6_3:11946829-11946848 Msa0939800:five_prime_UTR 20.0%
! ATTGTAGAGAAGGAAAAAAA+TGG + chr6_3:11930955-11930974 None:intergenic 25.0%
! AATGTATAGTATTGTAGAGA+AGG + chr6_3:11930965-11930984 None:intergenic 25.0%
! TAACACATTATTCATCAATG+AGG - chr6_3:11931068-11931087 Msa0939800:CDS 25.0%
! TTGATTGTTATGTTTCCATT+TGG + chr6_3:11931258-11931277 None:intergenic 25.0%
! ATGGAAACATAACAATCAAA+TGG - chr6_3:11931259-11931278 Msa0939800:intron 25.0%
! TGGAAACATAACAATCAAAT+GGG - chr6_3:11931260-11931279 Msa0939800:intron 25.0%
! AATGATGGCTTATCATATAA+GGG + chr6_3:11931423-11931442 None:intergenic 25.0%
!!! AACTCTAAAATGATAGTTAC+AGG + chr6_3:11931453-11931472 None:intergenic 25.0%
! TAAATAAACACTTAAAGGGA+AGG + chr6_3:11931596-11931615 None:intergenic 25.0%
! TTAAAAGTTTATCCCTACTA+AGG - chr6_3:11931613-11931632 Msa0939800:CDS 25.0%
! ATGTTGTCAATAGAAAAACT+AGG + chr6_3:11932453-11932472 None:intergenic 25.0%
! TTTATTATTATGCAGTGACA+TGG - chr6_3:11932554-11932573 Msa0939800:intron 25.0%
!!! TTACACAGTTTTTCTTGTTT+TGG + chr6_3:11932696-11932715 None:intergenic 25.0%
!! CTCTTTTGTTAGTAATTTTG+CGG - chr6_3:11933231-11933250 Msa0939800:intron 25.0%
!! GTTTCTTTTGTTAGTCATTT+TGG + chr6_3:11933258-11933277 None:intergenic 25.0%
! GACTAACAAAAGAAACATTT+AGG - chr6_3:11933262-11933281 Msa0939800:intron 25.0%
! ATACTTCAATGATCTACTAA+TGG - chr6_3:11933438-11933457 Msa0939800:intron 25.0%
!! AGTGTCGGATATTTAAAAAA+AGG - chr6_3:11933703-11933722 Msa0939800:intron 25.0%
! ACAGACTCAAAATTATTGTT+GGG + chr6_3:11933904-11933923 None:intergenic 25.0%
! AACAGACTCAAAATTATTGT+TGG + chr6_3:11933905-11933924 None:intergenic 25.0%
! AATCTCGCAAATATTTATGT+CGG + chr6_3:11933961-11933980 None:intergenic 25.0%
! ACATGATTTATGATAGGATA+TGG + chr6_3:11934176-11934195 None:intergenic 25.0%
! GAAACTAAGAAACAAATCAT+AGG - chr6_3:11934332-11934351 Msa0939800:intron 25.0%
! TAGTTGTCTACGATTATAAA+GGG + chr6_3:11934871-11934890 None:intergenic 25.0%
! TTAGTTGTCTACGATTATAA+AGG + chr6_3:11934872-11934891 None:intergenic 25.0%
!! AGTTTGTGTAAGATTTTTCA+AGG + chr6_3:11934985-11935004 None:intergenic 25.0%
! CTGTTACTAATTTCAATTAC+AGG + chr6_3:11935117-11935136 None:intergenic 25.0%
! AAAGAATAGTATTATGCCTT+TGG + chr6_3:11935224-11935243 None:intergenic 25.0%
!! AAAGGCATAATACTATTCTT+TGG - chr6_3:11935223-11935242 Msa0939800:intron 25.0%
!! TTTTAGTCCTTGAAATTGTA+AGG - chr6_3:11935343-11935362 Msa0939800:intron 25.0%
!! TTTTAGTCCTTCAAATTGTA+AGG + chr6_3:11935415-11935434 None:intergenic 25.0%
! ATATATGATTTCCTTCTGAA+CGG + chr6_3:11935475-11935494 None:intergenic 25.0%
! TATCATTATAGAATGATGAG+AGG - chr6_3:11935585-11935604 Msa0939800:intron 25.0%
! ATCATTATAGAATGATGAGA+GGG - chr6_3:11935586-11935605 Msa0939800:intron 25.0%
!!! TTTTTATTTTTGCAGTGACA+TGG + chr6_3:11935670-11935689 None:intergenic 25.0%
! TGTAAAAAAAACTATGCTCA+AGG - chr6_3:11935738-11935757 Msa0939800:intron 25.0%
!!! ATAATTATCTAGGTCTTGTT+TGG + chr6_3:11935907-11935926 None:intergenic 25.0%
! GGAGATTGTTCAAAATTTAA+AGG + chr6_3:11944771-11944790 None:intergenic 25.0%
! GTCTAACTAACAATTGATAA+TGG + chr6_3:11936433-11936452 None:intergenic 25.0%
! TGGGAATATCACAATAAAAT+GGG + chr6_3:11936611-11936630 None:intergenic 25.0%
! ATGGGAATATCACAATAAAA+TGG + chr6_3:11936612-11936631 None:intergenic 25.0%
! TTTATTGTGATATTCCCATT+TGG - chr6_3:11936613-11936632 Msa0939800:intron 25.0%
! TTATTGTGATATTCCCATTT+GGG - chr6_3:11936614-11936633 Msa0939800:intron 25.0%
!!! TGGTGTTATTCAATGTTTTT+AGG + chr6_3:11936793-11936812 None:intergenic 25.0%
!!! CGTCACAATTTTTTATATTG+CGG + chr6_3:11937310-11937329 None:intergenic 25.0%
! CAATATAAAAAATTGTGACG+CGG - chr6_3:11937310-11937329 Msa0939800:intron 25.0%
!! ATTTCTGTGTTTTATGTTGA+TGG + chr6_3:11937533-11937552 None:intergenic 25.0%
! ACATAAAACACAGAAATGAA+AGG - chr6_3:11937536-11937555 Msa0939800:intron 25.0%
!! TGAGAGTTGGAATTTTTATT+TGG - chr6_3:11938157-11938176 Msa0939800:intron 25.0%
! TATTTGGTCACATATGAAAA+TGG - chr6_3:11938173-11938192 Msa0939800:intron 25.0%
! TCTAAACTTCCTTGTAAAAA+AGG + chr6_3:11938315-11938334 None:intergenic 25.0%
!! TCATCTAAAACTGTTAATGA+AGG + chr6_3:11938499-11938518 None:intergenic 25.0%
!!! TATTTTGTATTTTTTGTCCG+TGG + chr6_3:11938537-11938556 None:intergenic 25.0%
!! TTTTCAGTAATTCTGTTAGT+TGG + chr6_3:11938602-11938621 None:intergenic 25.0%
! TATATCATCGAAGAGATTAT+CGG + chr6_3:11939496-11939515 None:intergenic 25.0%
! TAAATTGTTCTTGTACTTGT+AGG + chr6_3:11939731-11939750 None:intergenic 25.0%
! ACTCGTTGAGATATTAATTT+AGG + chr6_3:11939754-11939773 None:intergenic 25.0%
! TTCTTTCTTAGACAAATTTG+TGG + chr6_3:11939804-11939823 None:intergenic 25.0%
!! AAATATACTAAGAGTGTATG+AGG + chr6_3:11939986-11940005 None:intergenic 25.0%
! AACAATATATAGAGACTTAG+TGG - chr6_3:11940111-11940130 Msa0939800:intron 25.0%
!!! GTTTTTGTGTTTGTTTTTGT+CGG + chr6_3:11940660-11940679 Msa0939810:intron 25.0%
! AATAAATACACACTGAAAGA+CGG + chr6_3:11941103-11941122 Msa0939810:intron 25.0%
! AAAAGTGAAAAAAGTCTATG+TGG - chr6_3:11941138-11941157 Msa0939800:intron 25.0%
!! ATTTTCTTTGTTCTTTACTG+TGG - chr6_3:11941386-11941405 Msa0939800:intron 25.0%
! TCAAGTGTAAATTAACATGA+AGG + chr6_3:11941528-11941547 Msa0939810:intron 25.0%
! ATGGAAATATCACAATCAAA+TGG - chr6_3:11941604-11941623 Msa0939800:intron 25.0%
! TGGAAATATCACAATCAAAT+GGG - chr6_3:11941605-11941624 Msa0939800:intron 25.0%
! TCAAATGGGATATTATAAGT+TGG - chr6_3:11941619-11941638 Msa0939800:intron 25.0%
!! AGAGATGACAATAGATTTTT+GGG + chr6_3:11942190-11942209 Msa0939810:CDS 25.0%
! TAGTATAAAAGCTATGAAGA+TGG + chr6_3:11942213-11942232 Msa0939810:CDS 25.0%
! TTTCAGAAAAGAAAATTGAG+TGG - chr6_3:11943021-11943040 Msa0939800:intron 25.0%
!! CTTACTTTGAAAACAGAATA+AGG - chr6_3:11943158-11943177 Msa0939800:intron 25.0%
! ATCAAAAAAGGTTCAATACA+AGG - chr6_3:11943252-11943271 Msa0939800:intron 25.0%
!!! TTTTGTCTGATTTGATGATT+GGG + chr6_3:11944303-11944322 None:intergenic 25.0%
!!! TTTTTGTCTGATTTGATGAT+TGG + chr6_3:11944304-11944323 None:intergenic 25.0%
! TGTAAAACTTATATGCACTA+TGG + chr6_3:11944461-11944480 None:intergenic 25.0%
! AATATAATGATGTAGTGAGA+TGG + chr6_3:11944505-11944524 None:intergenic 25.0%
! GGAGATTGTTCAAAATTTAA+AGG - chr6_3:11944771-11944790 Msa0939800:five_prime_UTR 25.0%
!! ATAATTTTCTAGGTCATGTT+TGG - chr6_3:11945143-11945162 Msa0939800:five_prime_UTR 25.0%
!! AATTTGGTTTAAGTAATAGG+AGG + chr6_3:11945442-11945461 None:intergenic 25.0%
! TACAACTAACTGACAAAATT+TGG + chr6_3:11945458-11945477 None:intergenic 25.0%
! TTTAGTCCTTGAAATTGTAA+AGG - chr6_3:11935344-11935363 Msa0939800:intron 25.0%
!! TTTTAGTCCTTGAAATTGTA+AGG + chr6_3:11935343-11935362 None:intergenic 25.0%
!!! TATTGATTTGTAGTTGAAAC+TGG + chr6_3:11946283-11946302 None:intergenic 25.0%
! ACTTACTTGAATATAGTGTA+CGG - chr6_3:11946377-11946396 Msa0939800:intron 25.0%
! AAGTAAAACTCTTATCCTTT+CGG + chr6_3:11946817-11946836 None:intergenic 25.0%
!! GTTTTACTTTCGATAAAGAT+TGG - chr6_3:11946828-11946847 Msa0939800:five_prime_UTR 25.0%
! GAAGGAAAAAAATGGTTCTA+GGG + chr6_3:11930947-11930966 None:intergenic 30.0%
AGAAGGAAAAAAATGGTTCT+AGG + chr6_3:11930948-11930967 None:intergenic 30.0%
! GGTTTGGAGTTATAATTTAG+TGG + chr6_3:11931007-11931026 None:intergenic 30.0%
TCAAATGGGATATTATGTCT+TGG - chr6_3:11931274-11931293 Msa0939800:intron 30.0%
GAATGATGGCTTATCATATA+AGG + chr6_3:11931424-11931443 None:intergenic 30.0%
AAGAAGACTCAAATATTGCA+TGG - chr6_3:11931555-11931574 Msa0939800:CDS 30.0%
!!! GCATTTTTTTTATTAGGCGA+CGG - chr6_3:11931737-11931756 Msa0939800:intron 30.0%
TCATTATGTGTCGAAACATT+TGG + chr6_3:11931779-11931798 None:intergenic 30.0%
GGAGATTGTTCAAAATTCAA+AGG - chr6_3:11931879-11931898 Msa0939800:intron 30.0%
! TTTGTGAACTGTTGATTGTA+AGG + chr6_3:11931963-11931982 None:intergenic 30.0%
TTATCAAATAGCGGCTATAA+CGG + chr6_3:11932335-11932354 None:intergenic 30.0%
TCAATAGAAAAACTAGGACT+AGG + chr6_3:11932447-11932466 None:intergenic 30.0%
TGTAATGGTTTCATTGTAGA+AGG + chr6_3:11932647-11932666 None:intergenic 30.0%
!! TAAAGCGTCATGAACTTTTT+CGG + chr6_3:11932734-11932753 None:intergenic 30.0%
AATGGTTCATTGTCTTTCTT+TGG + chr6_3:11932853-11932872 None:intergenic 30.0%
AGACTAACTATAAGGACTAT+TGG - chr6_3:11932923-11932942 Msa0939800:intron 30.0%
TGTGTGACATTGTTAAGATT+TGG + chr6_3:11933021-11933040 None:intergenic 30.0%
! AACTCACTTATGGATTGATA+GGG + chr6_3:11933075-11933094 None:intergenic 30.0%
! AAACTCACTTATGGATTGAT+AGG + chr6_3:11933076-11933095 None:intergenic 30.0%
TATATGCTGAAACTCACTTA+TGG + chr6_3:11933085-11933104 None:intergenic 30.0%
!!! ATGATTGTCTGGTTTTCTTA+AGG + chr6_3:11933135-11933154 None:intergenic 30.0%
ACTAACAAAAGAGACATCTA+AGG + chr6_3:11933224-11933243 None:intergenic 30.0%
TCTGATTGAATATTTCCCTT+TGG + chr6_3:11933472-11933491 None:intergenic 30.0%
AAAGGGAAATATTCAATCAG+AGG - chr6_3:11933471-11933490 Msa0939800:intron 30.0%
CCATTAAAGTAAACTTTGTG+AGG + chr6_3:11933550-11933569 None:intergenic 30.0%
CCTCACAAAGTTTACTTTAA+TGG - chr6_3:11933547-11933566 Msa0939800:intron 30.0%
!! TATTTTTACTGCTAGCAGTT+TGG - chr6_3:11933665-11933684 Msa0939800:intron 30.0%
TGAATTGATGCATAAAGTGT+CGG - chr6_3:11933688-11933707 Msa0939800:intron 30.0%
TTTGATACACAAGCACTAAA+TGG - chr6_3:11933862-11933881 Msa0939800:intron 30.0%
CAGACTCAAAATTATTGTTG+GGG + chr6_3:11933903-11933922 None:intergenic 30.0%
!! GTTTGGTTTGAATTCCAAAT+CGG - chr6_3:11934398-11934417 Msa0939800:intron 30.0%
!!! ACAAGTTTTGACTCGATTTT+GGG + chr6_3:11934427-11934446 None:intergenic 30.0%
!!! TACAAGTTTTGACTCGATTT+TGG + chr6_3:11934428-11934447 None:intergenic 30.0%
TCATGCACATTCTTAATGTT+TGG + chr6_3:11934493-11934512 None:intergenic 30.0%
TCTGATTGTACATTACCAAT+AGG - chr6_3:11934702-11934721 Msa0939800:intron 30.0%
TATATGATTTCCTTCTGAAC+GGG + chr6_3:11935474-11935493 None:intergenic 30.0%
AATTTACAACACCAGACAAA+AGG + chr6_3:11935991-11936010 None:intergenic 30.0%
!! TCTGGTGTTGTAAATTTAGT+AGG - chr6_3:11935995-11936014 Msa0939800:intron 30.0%
TGTAAATTTAGTAGGTGTTC+CGG - chr6_3:11936003-11936022 Msa0939800:intron 30.0%
!! TTTGCAGTTTGTTGATTGTA+AGG - chr6_3:11936196-11936215 Msa0939800:intron 30.0%
!! ACTAACAATTGATAATGGAC+AGG + chr6_3:11936428-11936447 None:intergenic 30.0%
TCATCATGAATAATGTGTTC+TGG - chr6_3:11936487-11936506 Msa0939800:intron 30.0%
TAAAATGGGATATCATAAGC+TGG + chr6_3:11936597-11936616 None:intergenic 30.0%
!!! AATGTTTTTAGGAGTAAGCA+TGG + chr6_3:11936782-11936801 None:intergenic 30.0%
AGCTGTCACAATCTAATAAA+AGG - chr6_3:11936815-11936834 Msa0939800:intron 30.0%
! AGTGACAGGGTTTAAAATAA+AGG - chr6_3:11937080-11937099 Msa0939800:intron 30.0%
TGCAACATAATGTGTATGTT+TGG - chr6_3:11937121-11937140 Msa0939800:intron 30.0%
AATGTGTATGTTTGGATTGA+TGG - chr6_3:11937129-11937148 Msa0939800:intron 30.0%
TCTGCAAGATGATAAATTGT+GGG + chr6_3:11937245-11937264 None:intergenic 30.0%
TTCTGCAAGATGATAAATTG+TGG + chr6_3:11937246-11937265 None:intergenic 30.0%
! TTTATGCCTCCATGATTTTA+AGG + chr6_3:11937355-11937374 None:intergenic 30.0%
!! GAAAAGGGTTTTTGGAAAAA+GGG + chr6_3:11937436-11937455 None:intergenic 30.0%
!! TGAAAAGGGTTTTTGGAAAA+AGG + chr6_3:11937437-11937456 None:intergenic 30.0%
GTTGAAAATGTGGTTGAAAA+GGG + chr6_3:11937451-11937470 None:intergenic 30.0%
TGTTGAAAATGTGGTTGAAA+AGG + chr6_3:11937452-11937471 None:intergenic 30.0%
CATTCATGTTGTTGAAAATG+TGG + chr6_3:11937461-11937480 None:intergenic 30.0%
!!! CTTACGTGATTTTGATTCAT+GGG + chr6_3:11937612-11937631 None:intergenic 30.0%
TGTAGAACAGTGTAAATATC+AGG - chr6_3:11937730-11937749 Msa0939800:intron 30.0%
ATGGACAATGTTTAAGGAAA+TGG - chr6_3:11937766-11937785 Msa0939800:intron 30.0%
TTTCTTTCTCTTCAAGTGTT+TGG + chr6_3:11937892-11937911 None:intergenic 30.0%
!!! TTGTGAGTCTAAGTTTTAGA+CGG - chr6_3:11938284-11938303 Msa0939800:intron 30.0%
!!! GATATTTGTCATTTTGTCCA+CGG - chr6_3:11938517-11938536 Msa0939800:intron 30.0%
AACCTTCTTTGAACTTTGAA+GGG + chr6_3:11938913-11938932 None:intergenic 30.0%
AATGAGGTAGAGACTATTTA+GGG - chr6_3:11938935-11938954 Msa0939800:intron 30.0%
TTCACTCAAACATACAAAGT+AGG + chr6_3:11939123-11939142 None:intergenic 30.0%
ATATCATCGAAGAGATTATC+GGG + chr6_3:11939495-11939514 None:intergenic 30.0%
TAGACAAATTTGTGGAGAAA+TGG + chr6_3:11939796-11939815 None:intergenic 30.0%
! GGAAATGTATACATTTTGCT+TGG + chr6_3:11939860-11939879 None:intergenic 30.0%
!!! AAACGACATTCGTTTTGAAA+CGG + chr6_3:11940216-11940235 Msa0939810:intron 30.0%
! TTCAAAACGAATGTCGTTTA+AGG - chr6_3:11940217-11940236 Msa0939800:intron 30.0%
ATGGACAATGTTTAAGGAAA+GGG + chr6_3:11937766-11937785 None:intergenic 30.0%
! TGAACTTTTTATTCCTTCTG+TGG - chr6_3:11940823-11940842 Msa0939800:intron 30.0%
!!! TGTGCTGTTTAAATCTCTTT+TGG - chr6_3:11940861-11940880 Msa0939800:intron 30.0%
CAATCTCATAACAAACACTA+AGG + chr6_3:11940941-11940960 Msa0939810:intron 30.0%
!! AGTGTTTGTTATGAGATTGA+TGG - chr6_3:11940942-11940961 Msa0939800:intron 30.0%
CTTTCATGTTGTTCAAAATG+TGG - chr6_3:11940976-11940995 Msa0939800:intron 30.0%
TTGAAATGTGACCTCAATTA+TGG - chr6_3:11941288-11941307 Msa0939800:intron 30.0%
GGGTTGTGTAACATAAAAAA+CGG - chr6_3:11941313-11941332 Msa0939800:intron 30.0%
! AACGGTTTAATTTCGTTAAC+TGG - chr6_3:11941331-11941350 Msa0939800:intron 30.0%
TGATTGTGATATTTCCATGT+GGG + chr6_3:11941602-11941621 Msa0939810:intron 30.0%
TTGATTGTGATATTTCCATG+TGG + chr6_3:11941603-11941622 Msa0939810:intron 30.0%
! AATGGAACACATTTTTGTGA+TGG - chr6_3:11941721-11941740 Msa0939800:intron 30.0%
!!! GGTGTTTTAAGTTAGAATGT+TGG + chr6_3:11942002-11942021 Msa0939810:intron 30.0%
!!! CTATTTTTAGGCATTGGTTT+TGG + chr6_3:11942061-11942080 Msa0939810:intron 30.0%
AACCAATGCCTAAAAATAGA+AGG - chr6_3:11942062-11942081 Msa0939800:intron 30.0%
!!! TTCCTTCTATTTTTAGGCAT+TGG + chr6_3:11942067-11942086 Msa0939810:intron 30.0%
TCCTATAAAATCCAAAGAGT+AGG - chr6_3:11942109-11942128 Msa0939800:intron 30.0%
! TCCTACTCTTTGGATTTTAT+AGG + chr6_3:11942113-11942132 Msa0939810:intron 30.0%
! GAGAGATGACAATAGATTTT+TGG + chr6_3:11942191-11942210 Msa0939810:CDS 30.0%
! TTTTAATCAAAAGCCTTCCT+AGG + chr6_3:11942434-11942453 Msa0939810:intron 30.0%
! TGCTGATTGATACAAAAGAA+AGG + chr6_3:11942518-11942537 Msa0939810:intron 30.0%
ATCAATCAGCAATTTCTGTA+AGG - chr6_3:11942527-11942546 Msa0939800:intron 30.0%
GCTTATTCTTCCCATTTAAT+AGG + chr6_3:11942555-11942574 Msa0939810:intron 30.0%
TAATTTACACTTACTCAGCT+AGG - chr6_3:11942804-11942823 Msa0939800:intron 30.0%
AATTTACACTTACTCAGCTA+GGG - chr6_3:11942805-11942824 Msa0939800:intron 30.0%
!!! TTTTCACGAAAATAATGGGT+AGG - chr6_3:11943084-11943103 Msa0939800:intron 30.0%
TGAAAACAGAATAAGGAAAG+TGG - chr6_3:11943165-11943184 Msa0939800:intron 30.0%
!!! CCTTTTTTGATTAATGATGC+CGG + chr6_3:11943243-11943262 Msa0939810:CDS 30.0%
AAAAAAGGTTCAATACAAGG+AGG - chr6_3:11943255-11943274 Msa0939800:intron 30.0%
! TTTGTCTGATTTGATGATTG+GGG + chr6_3:11944302-11944321 None:intergenic 30.0%
! ATTCATACACACCTTGATTT+TGG - chr6_3:11944333-11944352 Msa0939800:five_prime_UTR 30.0%
! TTCATACACACCTTGATTTT+GGG - chr6_3:11944334-11944353 Msa0939800:five_prime_UTR 30.0%
AAACTTATATGCACTATGGT+TGG + chr6_3:11944457-11944476 None:intergenic 30.0%
!!! GATGTTTTTTACAGCAATGT+GGG + chr6_3:11944803-11944822 None:intergenic 30.0%
TTGCTGTAAAAAACATCCAA+CGG - chr6_3:11944806-11944825 Msa0939800:five_prime_UTR 30.0%
CAAATTGCAAATTGTTGCAA+AGG - chr6_3:11944864-11944883 Msa0939800:five_prime_UTR 30.0%
AATGCTGAAACTGCATTTAT+TGG + chr6_3:11944918-11944937 None:intergenic 30.0%
!! TCTGGTGTTATGTATTTAGT+AGG + chr6_3:11945056-11945075 None:intergenic 30.0%
AATACATAACACCAGACAAA+AGG - chr6_3:11945060-11945079 Msa0939800:intron 30.0%
! TAAGTTGTTTCCATATATCC+TGG - chr6_3:11945278-11945297 Msa0939800:intron 30.0%
CAACTTATGAACATGTCATA+AGG - chr6_3:11945326-11945345 Msa0939800:intron 30.0%
TGAGCATTTAAGAGACTATT+TGG + chr6_3:11945368-11945387 None:intergenic 30.0%
!!! CTGATTTTTTTTCAGTGACA+TGG - chr6_3:11945635-11945654 Msa0939800:intron 30.0%
AGTGAAATCTTACTCTATAC+AGG + chr6_3:11935502-11935521 None:intergenic 30.0%
! TGATTTTCTTCTAAACGGAT+CGG - chr6_3:11945835-11945854 Msa0939800:five_prime_UTR 30.0%
TTAGTGCCTTTACAATTTCA+AGG + chr6_3:11945900-11945919 None:intergenic 30.0%
TTGCTATGTCGCAAATTTAA+AGG - chr6_3:11945921-11945940 Msa0939800:five_prime_UTR 30.0%
TGAGTCAGATTGTAAAAGTT+TGG + chr6_3:11946255-11946274 None:intergenic 30.0%
ACTAAGTTGTTTATCCAAAC+AGG + chr6_3:11946454-11946473 None:intergenic 30.0%
TACAAACCCTAAGATTATGA+AGG - chr6_3:11946611-11946630 Msa0939800:intron 30.0%
ACAAACCCTAAGATTATGAA+GGG - chr6_3:11946612-11946631 Msa0939800:intron 30.0%
AAAACCCCTTCATAATCTTA+GGG + chr6_3:11946620-11946639 None:intergenic 30.0%
ATAATGTTCACACAGTGATT+AGG + chr6_3:11946689-11946708 None:intergenic 30.0%
AGATGATGCAACAATGATTT+GGG - chr6_3:11946721-11946740 Msa0939800:five_prime_UTR 30.0%
!! GTTCTAGGGAATTCTAGTTA+TGG + chr6_3:11930933-11930952 None:intergenic 35.0%
CATAGTTGCTTATGATCCTT+TGG - chr6_3:11931230-11931249 Msa0939800:intron 35.0%
TATGATCCTTTGGATCCAAA+TGG - chr6_3:11931240-11931259 Msa0939800:intron 35.0%
ATGTTTCCATTTGGATCCAA+AGG + chr6_3:11931249-11931268 None:intergenic 35.0%
! GTTACAGGTCTTTTGAATGA+TGG + chr6_3:11931438-11931457 None:intergenic 35.0%
AGAGATCAATTTAGTCAGGA+AGG + chr6_3:11931492-11931511 None:intergenic 35.0%
TCGTAGAGATCAATTTAGTC+AGG + chr6_3:11931496-11931515 None:intergenic 35.0%
ATCCAAACATGACCTTAGTA+GGG + chr6_3:11931628-11931647 None:intergenic 35.0%
TATCCAAACATGACCTTAGT+AGG + chr6_3:11931629-11931648 None:intergenic 35.0%
GTTTCGACACATAATGAATC+CGG - chr6_3:11931782-11931801 Msa0939800:intron 35.0%
TTTCGACACATAATGAATCC+GGG - chr6_3:11931783-11931802 Msa0939800:intron 35.0%
GGGCTAAGAAAGAAGTAATA+TGG - chr6_3:11931826-11931845 Msa0939800:intron 35.0%
CAGTTCACAAACTGTTGTAA+AGG - chr6_3:11931972-11931991 Msa0939800:intron 35.0%
TTCACAAACTGTTGTAAAGG+TGG - chr6_3:11931975-11931994 Msa0939800:intron 35.0%
! TCCGAAGAATTTCACTCTTT+TGG - chr6_3:11932094-11932113 Msa0939800:CDS 35.0%
GCCAAAAGAGTGAAATTCTT+CGG + chr6_3:11932098-11932117 None:intergenic 35.0%
AAATTCCTCCAAGCAACAAA+AGG - chr6_3:11932300-11932319 Msa0939800:intron 35.0%
AATTCCTCCAAGCAACAAAA+GGG - chr6_3:11932301-11932320 Msa0939800:intron 35.0%
GCACTATAGCATCTTTATCA+CGG + chr6_3:11932384-11932403 None:intergenic 35.0%
AATCTGCTATGAAAACTGCA+AGG - chr6_3:11932417-11932436 Msa0939800:intron 35.0%
TAGAAATTGTGAGTATGTGC+AGG + chr6_3:11932587-11932606 None:intergenic 35.0%
GATAAAGATACACAGCAACT+TGG + chr6_3:11932622-11932641 None:intergenic 35.0%
TCATCATATGTGCCCAATTA+GGG - chr6_3:11932885-11932904 Msa0939800:CDS 35.0%
GCATGTGAAGACTAACTATA+AGG - chr6_3:11932915-11932934 Msa0939800:CDS 35.0%
ACAGGATGAATTACTCTCTT+TGG - chr6_3:11932977-11932996 Msa0939800:CDS 35.0%
CATTATTATGCAGATGACAC+TGG - chr6_3:11933397-11933416 Msa0939800:intron 35.0%
AATGATCTACTAATGGAAGC+TGG - chr6_3:11933445-11933464 Msa0939800:intron 35.0%
!! TAAAGGTAACTAGTCTTGCA+GGG + chr6_3:11933627-11933646 None:intergenic 35.0%
!! TTAAAGGTAACTAGTCTTGC+AGG + chr6_3:11933628-11933647 None:intergenic 35.0%
! TGCAAGACTAGTTACCTTTA+AGG - chr6_3:11933627-11933646 Msa0939800:intron 35.0%
AAAACACTAAGCCAAACTCA+AGG - chr6_3:11933831-11933850 Msa0939800:intron 35.0%
AAAAAACACAGCCTTGAGTT+TGG + chr6_3:11933845-11933864 None:intergenic 35.0%
AAGCACTAAATGGATGCTAA+GGG - chr6_3:11933872-11933891 Msa0939800:intron 35.0%
TTATATCCATAAGCTCTCCA+AGG - chr6_3:11934044-11934063 Msa0939800:intron 35.0%
! AATGTTTCTGACAAAGACCT+TGG + chr6_3:11934064-11934083 None:intergenic 35.0%
!! ACTAAATAGGGTTAGCTACA+TGG - chr6_3:11934132-11934151 Msa0939800:intron 35.0%
GTTTCTTAGTTTCGGCATAT+CGG + chr6_3:11934325-11934344 None:intergenic 35.0%
ATTCAAACCAAACCAAAGCA+CGG + chr6_3:11934391-11934410 None:intergenic 35.0%
ATTCTTAATGTTTGGATCCG+TGG + chr6_3:11934485-11934504 None:intergenic 35.0%
! AAGGAAGGAAACCTTTTGTT+TGG - chr6_3:11934548-11934567 Msa0939800:intron 35.0%
TTGTACATTACCAATAGGAC+CGG - chr6_3:11934707-11934726 Msa0939800:intron 35.0%
AATGATTTACTCATGCAAGC+CGG + chr6_3:11934729-11934748 None:intergenic 35.0%
ATAATGTTTGCACGGTGATT+AGG - chr6_3:11934798-11934817 Msa0939800:intron 35.0%
TCCAAACCAATAACTCCTTA+CGG + chr6_3:11935019-11935038 None:intergenic 35.0%
TGAGTCAGATTGTCAAAGTT+TGG - chr6_3:11935055-11935074 Msa0939800:intron 35.0%
ACAGGATGAATTACTCAGAT+TGG + chr6_3:11935099-11935118 None:intergenic 35.0%
! AGCTTAACTACAAGGAGTAT+TGG + chr6_3:11935153-11935172 None:intergenic 35.0%
GCACATTAAGCTTAACTACA+AGG + chr6_3:11935161-11935180 None:intergenic 35.0%
TGACTAGTACATTGAACCAA+AGG - chr6_3:11935205-11935224 Msa0939800:intron 35.0%
! TCACATTTCCTTTTTCTGTG+TGG + chr6_3:11935295-11935314 None:intergenic 35.0%
GACAGAACCTTACAATTTCA+AGG + chr6_3:11945952-11945971 None:intergenic 35.0%
CAAACTGCAAATTGTTGCAA+AGG + chr6_3:11936187-11936206 None:intergenic 35.0%
! TTGTTGATTGTAAGGTGTTC+CGG - chr6_3:11936204-11936223 Msa0939800:intron 35.0%
!!! GGATCTTTTTTACAGCAATG+CGG - chr6_3:11936247-11936266 Msa0939800:intron 35.0%
!!! GATCTTTTTTACAGCAATGC+GGG - chr6_3:11936248-11936267 Msa0939800:intron 35.0%
GAAAGAGGTAATATGGAACA+TGG + chr6_3:11936326-11936345 None:intergenic 35.0%
CCAACAGTATCGTCATATAT+CGG + chr6_3:11936383-11936402 None:intergenic 35.0%
TTGGAAGTTGTTCATCGTAA+CGG - chr6_3:11936399-11936418 Msa0939800:intron 35.0%
TATTAGATTGTGACAGCTTC+TGG + chr6_3:11936813-11936832 None:intergenic 35.0%
TTTGCATAAAAACACCACCA+AGG - chr6_3:11936851-11936870 Msa0939800:intron 35.0%
ACCAGTAAACACTACTGATA+CGG - chr6_3:11936938-11936957 Msa0939800:intron 35.0%
! ATTTTAAACCCTGTCGCATA+AGG + chr6_3:11936981-11937000 None:intergenic 35.0%
! TGCGACAGGGTTTAAAATAA+AGG - chr6_3:11936983-11937002 Msa0939800:intron 35.0%
! TTCAAGTTTCAACCACAATC+TGG - chr6_3:11937006-11937025 Msa0939800:intron 35.0%
TCAAGTTTCAACCACAATCT+GGG - chr6_3:11937007-11937026 Msa0939800:intron 35.0%
TTCGTCAAAATCATAGTGAC+AGG - chr6_3:11937066-11937085 Msa0939800:intron 35.0%
TCGTCAAAATCATAGTGACA+GGG - chr6_3:11937067-11937086 Msa0939800:intron 35.0%
TAAAGGTTCAACCACAATCT+AGG - chr6_3:11937097-11937116 Msa0939800:intron 35.0%
ATAAATTGTGGGTGCATGTT+TGG + chr6_3:11937234-11937253 None:intergenic 35.0%
ATTGCGGAGAATTGTGAAAT+GGG + chr6_3:11937294-11937313 None:intergenic 35.0%
TATTGCGGAGAATTGTGAAA+TGG + chr6_3:11937295-11937314 None:intergenic 35.0%
!!! AAGGTCAGGGTTTTAAATAG+CGG + chr6_3:11937336-11937355 None:intergenic 35.0%
AAACCCTGACCTTAAAATCA+TGG - chr6_3:11937343-11937362 Msa0939800:intron 35.0%
! TGGAGGCATAAAAAAACATG+TGG - chr6_3:11937363-11937382 Msa0939800:intron 35.0%
! GGAGGCATAAAAAAACATGT+GGG - chr6_3:11937364-11937383 Msa0939800:intron 35.0%
GAGGCATAAAAAAACATGTG+GGG - chr6_3:11937365-11937384 Msa0939800:intron 35.0%
! GGATGATTTTGTGACTGTTA+GGG + chr6_3:11937394-11937413 None:intergenic 35.0%
! TGGATGATTTTGTGACTGTT+AGG + chr6_3:11937395-11937414 None:intergenic 35.0%
! ATGTGGTTGAAAAGGGTTTT+TGG + chr6_3:11937444-11937463 None:intergenic 35.0%
!!! CCTTACGTGATTTTGATTCA+TGG + chr6_3:11937613-11937632 None:intergenic 35.0%
CCATGAATCAAAATCACGTA+AGG - chr6_3:11937610-11937629 Msa0939800:intron 35.0%
ATCAGGAACATAAACATGCA+TGG - chr6_3:11937747-11937766 Msa0939800:intron 35.0%
ACATGCATGGACAATGTTTA+AGG - chr6_3:11937760-11937779 Msa0939800:intron 35.0%
GTGTTTATGTTGTGTACAGT+TGG - chr6_3:11938014-11938033 Msa0939800:intron 35.0%
TTGAAAGTGGTATGTGAATG+TGG - chr6_3:11938047-11938066 Msa0939800:intron 35.0%
TTTGATTCATGTGTGAGAGT+TGG - chr6_3:11938144-11938163 Msa0939800:intron 35.0%
TTGGTCACATATGAAAATGG+TGG - chr6_3:11938176-11938195 Msa0939800:intron 35.0%
ATCGAGTTACCTAATGAGTA+GGG + chr6_3:11938203-11938222 None:intergenic 35.0%
AATCGAGTTACCTAATGAGT+AGG + chr6_3:11938204-11938223 None:intergenic 35.0%
!!! ACGGTGTTTCCTTTTTTACA+AGG - chr6_3:11938303-11938322 Msa0939800:intron 35.0%
GTTGAATTTCGAAACTCATC+AGG - chr6_3:11938338-11938357 Msa0939800:intron 35.0%
! CCTTTCATTCGTCTTTTGTT+TGG + chr6_3:11938688-11938707 None:intergenic 35.0%
CCAAACAAAAGACGAATGAA+AGG - chr6_3:11938685-11938704 Msa0939800:intron 35.0%
CAACCTTCTTTGAACTTTGA+AGG + chr6_3:11938914-11938933 None:intergenic 35.0%
CTTCAAAGTTCAAAGAAGGT+TGG - chr6_3:11938912-11938931 Msa0939800:intron 35.0%
GAATGAGGTAGAGACTATTT+AGG - chr6_3:11938934-11938953 Msa0939800:intron 35.0%
ACTATTTAGGGAGGTTATTG+AGG - chr6_3:11938947-11938966 Msa0939800:intron 35.0%
CATGATGAATGTGTAGTTTC+AGG - chr6_3:11939171-11939190 Msa0939800:intron 35.0%
!! ATTTTAGAGGCTCAACCTAT+AGG - chr6_3:11939264-11939283 Msa0939800:intron 35.0%
! TCTAAAGTCTTGCTTCCTAT+AGG + chr6_3:11939282-11939301 None:intergenic 35.0%
! AAGTAGATGTACTTGCCTTT+TGG - chr6_3:11939310-11939329 Msa0939800:intron 35.0%
! GATGATTCCTTTTGCTCAAA+AGG - chr6_3:11939581-11939600 Msa0939800:intron 35.0%
! TTCTAGACCTTTTGAGCAAA+AGG + chr6_3:11939591-11939610 None:intergenic 35.0%
!!! GGTTTGTGTTTGGTTTTTGT+GGG + chr6_3:11939624-11939643 None:intergenic 35.0%
!!! TGGTTTGTGTTTGGTTTTTG+TGG + chr6_3:11939625-11939644 None:intergenic 35.0%
! GATTGGTTATGGTTTGTGTT+TGG + chr6_3:11939634-11939653 None:intergenic 35.0%
! CCAAGTTACTTGATTGGTTA+TGG + chr6_3:11939645-11939664 None:intergenic 35.0%
CCATAACCAATCAAGTAACT+TGG - chr6_3:11939642-11939661 Msa0939800:intron 35.0%
AAGACTCCAAGTTACTTGAT+TGG + chr6_3:11939651-11939670 None:intergenic 35.0%
GGGCAATGAAAAAGATATCA+AGG + chr6_3:11939675-11939694 None:intergenic 35.0%
GTACTTGTAGGTTACATCTA+CGG + chr6_3:11939719-11939738 None:intergenic 35.0%
ATTAGGAGTGAAGAGTTAAC+GGG + chr6_3:11939886-11939905 None:intergenic 35.0%
GATTAGGAGTGAAGAGTTAA+CGG + chr6_3:11939887-11939906 None:intergenic 35.0%
AGGATACTAAGAGTGGAAAT+AGG + chr6_3:11939966-11939985 None:intergenic 35.0%
GATAAGAATGTCACTCTAGT+CGG - chr6_3:11940006-11940025 Msa0939800:intron 35.0%
!! ATTTTAGTGGCTCACTAGAA+GGG + chr6_3:11940091-11940110 Msa0939810:CDS 35.0%
!!! TATTTTAGTGGCTCACTAGA+AGG + chr6_3:11940092-11940111 Msa0939810:CDS 35.0%
!!! CACTCATTTTAAAACGGATG+AGG - chr6_3:11940467-11940486 Msa0939800:intron 35.0%
CATGGACAATGTTTAAGGAA+AGG + chr6_3:11937765-11937784 None:intergenic 35.0%
TCATGCATGGACAATGTTTA+AGG + chr6_3:11940701-11940720 Msa0939810:intron 35.0%
AAGAGGAACAAAATCATGCA+TGG + chr6_3:11940714-11940733 Msa0939810:intron 35.0%
TGTAAAACAGCGTAAACAAG+AGG + chr6_3:11940731-11940750 Msa0939810:intron 35.0%
ACATGAATCAAAACCACAGA+AGG + chr6_3:11940839-11940858 Msa0939810:intron 35.0%
!!! TTCTGTGGTTTTGATTCATG+TGG - chr6_3:11940838-11940857 Msa0939800:intron 35.0%
TCATGTTGTTCAAAATGTGG+TGG - chr6_3:11940979-11940998 Msa0939800:intron 35.0%
! TGTTCAAAATGTGGTGGAAA+AGG - chr6_3:11940985-11941004 Msa0939800:intron 35.0%
! GTTCAAAATGTGGTGGAAAA+GGG - chr6_3:11940986-11941005 Msa0939800:intron 35.0%
ATTGCAATTTCATGCAACCT+AGG - chr6_3:11941018-11941037 Msa0939800:intron 35.0%
TTGCAATTTCATGCAACCTA+GGG - chr6_3:11941019-11941038 Msa0939800:intron 35.0%
! GGTTGTGAGGACATTTTATA+TGG - chr6_3:11941046-11941065 Msa0939800:intron 35.0%
AATGTGACCTCAATTATGGT+CGG - chr6_3:11941292-11941311 Msa0939800:intron 35.0%
! ATTATAAGTTGGACACCTGA+TGG - chr6_3:11941630-11941649 Msa0939800:intron 35.0%
GTACTTACAACATAACCATC+AGG + chr6_3:11941648-11941667 Msa0939810:intron 35.0%
GATAACACATTGAGAGAATC+TGG + chr6_3:11941762-11941781 Msa0939810:CDS 35.0%
TTCTCTCAATGTGTTATCAG+TGG - chr6_3:11941764-11941783 Msa0939800:intron 35.0%
GGAGCCAGACAAAAAAAATT+GGG - chr6_3:11941788-11941807 Msa0939800:intron 35.0%
!!! CCATCCCAATTTTTTTTGTC+TGG + chr6_3:11941795-11941814 Msa0939810:CDS 35.0%
CCAGACAAAAAAAATTGGGA+TGG - chr6_3:11941792-11941811 Msa0939800:intron 35.0%
! TTATAGGAGCATGCTGATAT+TGG + chr6_3:11942097-11942116 Msa0939810:intron 35.0%
!!! GTGTTTTGTTTCCTACTCTT+TGG + chr6_3:11942123-11942142 Msa0939810:intron 35.0%
! AATCAACTCTGTCTCTGTTT+TGG - chr6_3:11942325-11942344 Msa0939800:intron 35.0%
AGATTTCAACCTAACTACCT+AGG - chr6_3:11942414-11942433 Msa0939800:intron 35.0%
AAAGATTCTACAGGTCTACA+TGG - chr6_3:11942451-11942470 Msa0939800:intron 35.0%
! TCTGTAAGGCACCTATTAAA+TGG - chr6_3:11942541-11942560 Msa0939800:intron 35.0%
! CTGTAAGGCACCTATTAAAT+GGG - chr6_3:11942542-11942561 Msa0939800:intron 35.0%
AACCCTAAGCAAATCAAAAG+GGG + chr6_3:11942688-11942707 Msa0939810:CDS 35.0%
CAACCCTAAGCAAATCAAAA+GGG + chr6_3:11942689-11942708 Msa0939810:CDS 35.0%
ACAACCCTAAGCAAATCAAA+AGG + chr6_3:11942690-11942709 Msa0939810:CDS 35.0%
!! TTTGATTTGCTTAGGGTTGT+AGG - chr6_3:11942690-11942709 Msa0939800:intron 35.0%
TAAGAATCGACACATAACAG+TGG + chr6_3:11943142-11943161 Msa0939810:CDS 35.0%
AACAGAATAAGGAAAGTGGT+AGG - chr6_3:11943169-11943188 Msa0939800:intron 35.0%
ACAGAATAAGGAAAGTGGTA+GGG - chr6_3:11943170-11943189 Msa0939800:intron 35.0%
TTAACCGAAACCAACTTAAC+CGG - chr6_3:11943221-11943240 Msa0939800:intron 35.0%
! ATTAATGATGCCGGTTAAGT+TGG + chr6_3:11943234-11943253 Msa0939810:CDS 35.0%
CCGGCATCATTAATCAAAAA+AGG - chr6_3:11943240-11943259 Msa0939800:intron 35.0%
GAGGACAAATCTCAAAAACA+TGG - chr6_3:11943274-11943293 Msa0939800:intron 35.0%
! ACCTTGAGGTAAAGTTTGTT+AGG + chr6_3:11943359-11943378 None:intergenic 35.0%
AAATACAGTCCACTAGAGTA+CGG - chr6_3:11943454-11943473 Msa0939800:intron 35.0%
!! GAGAAAGGTGATTTTTGAGA+CGG + chr6_3:11943484-11943503 None:intergenic 35.0%
CGATTCTGTTATGGCATATT+TGG + chr6_3:11943878-11943897 None:intergenic 35.0%
!!! GATTTTTAGTATCTGCAACC+AGG + chr6_3:11943928-11943947 None:intergenic 35.0%
ACATGGTTCAACTACAGTTA+GGG + chr6_3:11943957-11943976 None:intergenic 35.0%
TACATGGTTCAACTACAGTT+AGG + chr6_3:11943958-11943977 None:intergenic 35.0%
! ATAAGGCTCGCAATTTTCTA+TGG + chr6_3:11944039-11944058 None:intergenic 35.0%
GAAAGTTAATGCACCACATA+AGG + chr6_3:11944056-11944075 None:intergenic 35.0%
!! TCGATTTGTTGTCTGTTGAA+GGG + chr6_3:11944249-11944268 None:intergenic 35.0%
!! ATCGATTTGTTGTCTGTTGA+AGG + chr6_3:11944250-11944269 None:intergenic 35.0%
! TTGTCTGATTTGATGATTGG+GGG + chr6_3:11944301-11944320 None:intergenic 35.0%
! TCATACACACCTTGATTTTG+GGG - chr6_3:11944335-11944354 Msa0939800:five_prime_UTR 35.0%
!! AACTTGTTAGCAGTAGAGAT+CGG + chr6_3:11944608-11944627 None:intergenic 35.0%
CCAACGTTATCGTCATATAT+CGG - chr6_3:11944668-11944687 Msa0939800:intron 35.0%
ATGGTCATTAGGATGGAATT+GGG - chr6_3:11944698-11944717 Msa0939800:intron 35.0%
GGCAAATAACGAGGTAATAT+GGG - chr6_3:11944719-11944738 Msa0939800:intron 35.0%
!!! TTTTTTACAGCAATGTGGGA+TGG + chr6_3:11944799-11944818 None:intergenic 35.0%
!!! GGATGTTTTTTACAGCAATG+TGG + chr6_3:11944804-11944823 None:intergenic 35.0%
ATTGCAAATTGTTGCAAAGG+CGG - chr6_3:11944867-11944886 Msa0939800:five_prime_UTR 35.0%
! GCTTGCAAGGTGAAATTTTT+CGG + chr6_3:11944990-11945009 None:intergenic 35.0%
TTGTTTCCATATATCCTGGA+GGG - chr6_3:11945282-11945301 Msa0939800:intron 35.0%
TAAGCTCAAATTAGTGCTCA+TGG - chr6_3:11945398-11945417 Msa0939800:intron 35.0%
! CAGTTAGTTGTATAGCTCTA+AGG - chr6_3:11945466-11945485 Msa0939800:intron 35.0%
GACAGAACCTTACAATTTCA+AGG - chr6_3:11945952-11945971 Msa0939800:five_prime_UTR 35.0%
GACTATAACCACACAGAAAA+AGG + chr6_3:11946026-11946045 None:intergenic 35.0%
TGACTAGTACATTGAACCAA+AGG + chr6_3:11935205-11935224 None:intergenic 35.0%
GCACATTAATCTTAACGACA+AGG - chr6_3:11946149-11946168 Msa0939800:intron 35.0%
! ATCTTAACGACAAGGAGTAT+TGG - chr6_3:11946157-11946176 Msa0939800:intron 35.0%
CTGTTACCAATTTCAACTAC+AGG - chr6_3:11946193-11946212 Msa0939800:intron 35.0%
ATTCGTCCTGTAGTTGAAAT+TGG + chr6_3:11946202-11946221 None:intergenic 35.0%
GAATTACTCAGATTGGAACT+TGG - chr6_3:11946218-11946237 Msa0939800:intron 35.0%
AGTCTCACAAGTACTTACAT+CGG - chr6_3:11946584-11946603 Msa0939800:five_prime_UTR 35.0%
CAAACCCTAAGATTATGAAG+GGG - chr6_3:11946613-11946632 Msa0939800:intron 35.0%
GAAAACCCCTTCATAATCTT+AGG + chr6_3:11946621-11946640 None:intergenic 35.0%
CAGATGATGCAACAATGATT+TGG - chr6_3:11946720-11946739 Msa0939800:five_prime_UTR 35.0%
GATGATGCAACAATGATTTG+GGG - chr6_3:11946722-11946741 Msa0939800:five_prime_UTR 35.0%
TTGGGGAGTTAAATTCTACA+AGG - chr6_3:11946739-11946758 Msa0939800:five_prime_UTR 35.0%
TCTAACTGTACATTACCAGT+AGG + chr6_3:11946785-11946804 None:intergenic 35.0%
GTTATGGCTTACTCACCAAA+TGG + chr6_3:11930917-11930936 None:intergenic 40.0%
! CTTGTGTTAGTCTCTTATGC+AGG - chr6_3:11931115-11931134 Msa0939800:intron 40.0%
ATTATGTCTTGGACACCAGA+TGG - chr6_3:11931285-11931304 Msa0939800:intron 40.0%
GTACTTACCACATAACCATC+TGG + chr6_3:11931303-11931322 None:intergenic 40.0%
ATCCCTACTAAGGTCATGTT+TGG - chr6_3:11931623-11931642 Msa0939800:CDS 40.0%
ATGGACATTAGGATGGACAT+GGG - chr6_3:11931806-11931825 Msa0939800:intron 40.0%
GAAGTAATATGGTCTGTGAC+AGG - chr6_3:11931837-11931856 Msa0939800:intron 40.0%
TGAACAATCTCCTTGTTCTG+TGG + chr6_3:11931871-11931890 None:intergenic 40.0%
GTTGATTGTAAGGTACACCA+GGG + chr6_3:11931953-11931972 None:intergenic 40.0%
! TGTTGATTGTAAGGTACACC+AGG + chr6_3:11931954-11931973 None:intergenic 40.0%
AGATCCTGCAGAAGCTATAT+CGG - chr6_3:11932019-11932038 Msa0939800:intron 40.0%
!!! TCGGCTTTTCAAGTTAGTGT+TGG - chr6_3:11932038-11932057 Msa0939800:CDS 40.0%
! AAGTTTAACCGTTCGGTTTG+TGG + chr6_3:11932075-11932094 None:intergenic 40.0%
TCTTCGGAAGTTTAACCGTT+CGG + chr6_3:11932082-11932101 None:intergenic 40.0%
!!! AATTTCACTCTTTTGGCTCC+TGG - chr6_3:11932101-11932120 Msa0939800:CDS 40.0%
! TGGAAGGAACAACTTTTGCA+GGG + chr6_3:11932145-11932164 None:intergenic 40.0%
ATCAGGTGTAAGGAAATTGG+TGG + chr6_3:11932165-11932184 None:intergenic 40.0%
CCTATCAGGTGTAAGGAAAT+TGG + chr6_3:11932168-11932187 None:intergenic 40.0%
CCAATTTCCTTACACCTGAT+AGG - chr6_3:11932165-11932184 Msa0939800:CDS 40.0%
TACTCAATGCTTGAGTCTTG+CGG + chr6_3:11932193-11932212 None:intergenic 40.0%
!! TCATTGTTGGTTTGCTATGC+AGG - chr6_3:11932788-11932807 Msa0939800:CDS 40.0%
!! TAGCTCTAAGATTCTGAGCA+TGG - chr6_3:11932813-11932832 Msa0939800:CDS 40.0%
! TCTAAGATTCTGAGCATGGT+GGG - chr6_3:11932817-11932836 Msa0939800:CDS 40.0%
TGATGAGTGCATTGCATCAA+TGG + chr6_3:11932871-11932890 None:intergenic 40.0%
CTCATCATATGTGCCCAATT+AGG - chr6_3:11932884-11932903 Msa0939800:CDS 40.0%
CGGTCACGAATTTCAATTAC+AGG - chr6_3:11932959-11932978 Msa0939800:CDS 40.0%
! ATGGATTGATAGGGAAGAAG+TGG + chr6_3:11933066-11933085 None:intergenic 40.0%
GAACGATCGAAATGATTGTC+TGG + chr6_3:11933146-11933165 None:intergenic 40.0%
TTTCGATCGTTCAATGTGTG+AGG - chr6_3:11933154-11933173 Msa0939800:CDS 40.0%
GTGTGAGACGTTGTCTTAAT+AGG + chr6_3:11933319-11933338 None:intergenic 40.0%
GATACCTTCACATTCAAGCA+AGG - chr6_3:11933514-11933533 Msa0939800:intron 40.0%
CTTCACATTCAAGCAAGGAT+GGG - chr6_3:11933519-11933538 Msa0939800:intron 40.0%
AGAATTAGGGAGAAAAGGGT+AGG + chr6_3:11933602-11933621 None:intergenic 40.0%
!! AAAGGTAACTAGTCTTGCAG+GGG + chr6_3:11933626-11933645 None:intergenic 40.0%
TGAGAAGATGAGTGCCTTAA+AGG + chr6_3:11933644-11933663 None:intergenic 40.0%
CAAGCACTAAATGGATGCTA+AGG - chr6_3:11933871-11933890 Msa0939800:intron 40.0%
! TAGGGAGAATGTGCTATTCT+TGG - chr6_3:11934351-11934370 Msa0939800:intron 40.0%
TGCTATTCTTGGATTGTCCA+TGG - chr6_3:11934362-11934381 Msa0939800:intron 40.0%
!!! TCGATTTTGGGATACCGATT+TGG + chr6_3:11934415-11934434 None:intergenic 40.0%
! AGAATGTGCATGAAGTACCA+AGG - chr6_3:11934500-11934519 Msa0939800:intron 40.0%
AAAGGTTTCCTTCCTTGCTT+TGG + chr6_3:11934544-11934563 None:intergenic 40.0%
!! GGAAACCTTTTGTTTGGAAC+CGG - chr6_3:11934554-11934573 Msa0939800:intron 40.0%
!! TAATGCCGGTTCCAAACAAA+AGG + chr6_3:11934562-11934581 None:intergenic 40.0%
!! TTTTGTTTGGAACCGGCATT+AGG - chr6_3:11934561-11934580 Msa0939800:intron 40.0%
TATCCATGGTTACCTAATGC+CGG + chr6_3:11934576-11934595 None:intergenic 40.0%
!!! ATCAGAGCTACTTTTCCGAA+AGG + chr6_3:11934688-11934707 None:intergenic 40.0%
!! TTTAACTCCCCAAAGCATTG+CGG - chr6_3:11934755-11934774 Msa0939800:intron 40.0%
AGATGATACCGCAATGCTTT+GGG + chr6_3:11934766-11934785 None:intergenic 40.0%
AACTTACTTATCGACCCGTA+AGG - chr6_3:11935001-11935020 Msa0939800:CDS 40.0%
CCAAACCAATAACTCCTTAC+GGG + chr6_3:11935018-11935037 None:intergenic 40.0%
AGTTTGGATGTTGAACAACC+AGG - chr6_3:11935071-11935090 Msa0939800:intron 40.0%
GAATTACTCAGATTGGAACC+TGG + chr6_3:11935092-11935111 None:intergenic 40.0%
GACTGTAACCACACAGAAAA+AGG - chr6_3:11935284-11935303 Msa0939800:intron 40.0%
TCTATACAGCTTCCTGATTG+AGG - chr6_3:11935515-11935534 Msa0939800:intron 40.0%
ACATGTGGACAAGCAAAAAC+CGG + chr6_3:11936025-11936044 None:intergenic 40.0%
! GCTTTCAGGGTGAAATTTTG+CGG - chr6_3:11936061-11936080 Msa0939800:intron 40.0%
AAATGCAGTTGCGTCATTTC+AGG + chr6_3:11936131-11936150 None:intergenic 40.0%
AATGACGCAACTGCATTTGT+TGG - chr6_3:11936133-11936152 Msa0939800:intron 40.0%
ACTGCAAATTGTTGCAAAGG+TGG + chr6_3:11936184-11936203 None:intergenic 40.0%
! TGTTGATTGTAAGGTGTTCC+GGG - chr6_3:11936205-11936224 Msa0939800:intron 40.0%
ACTGTCGTAGATTTACTTCC+CGG + chr6_3:11936226-11936245 None:intergenic 40.0%
GGAAGTAAATCTACGACAGT+TGG - chr6_3:11936226-11936245 Msa0939800:intron 40.0%
GAGGTAATATGGAACATGGT+GGG + chr6_3:11936322-11936341 None:intergenic 40.0%
AGAGGTAATATGGAACATGG+TGG + chr6_3:11936323-11936342 None:intergenic 40.0%
GGGCAAAGAAAGAGGTAATA+TGG + chr6_3:11936333-11936352 None:intergenic 40.0%
ATGGTCATTAGGATGGACAT+GGG + chr6_3:11936353-11936372 None:intergenic 40.0%
CCGATATATGACGATACTGT+TGG - chr6_3:11936380-11936399 Msa0939800:intron 40.0%
ATATTCCCATTTGGGTCAAG+CGG - chr6_3:11936622-11936641 Msa0939800:intron 40.0%
!!! ACCACCAAGGTTTTAAATCG+CGG - chr6_3:11936864-11936883 Msa0939800:intron 40.0%
! TTGACCGCGATTTAAAACCT+TGG + chr6_3:11936871-11936890 None:intergenic 40.0%
!!! AAGGTTTTAAATCGCGGTCA+AGG - chr6_3:11936870-11936889 Msa0939800:intron 40.0%
ATAAGGCCACCAAAATTGGA+GGG + chr6_3:11936964-11936983 None:intergenic 40.0%
TGCAACATGACGTGTATGTT+TGG - chr6_3:11937031-11937050 Msa0939800:intron 40.0%
GACGTGTATGTTTGGATTGA+TGG - chr6_3:11937039-11937058 Msa0939800:intron 40.0%
TTATGTTGCAGCCTAGATTG+TGG + chr6_3:11937111-11937130 None:intergenic 40.0%
!! TTTGGATTGATGGTGAGTTC+TGG - chr6_3:11937049-11937068 Msa0939800:intron 40.0%
!! TTGGATTGATGGTGAGTTCT+GGG - chr6_3:11937140-11937159 Msa0939800:intron 40.0%
ACGGTGAAATGGCAAAATCA+CGG + chr6_3:11937207-11937226 None:intergenic 40.0%
TGTTTGGATTGACGGTGAAA+TGG + chr6_3:11937218-11937237 None:intergenic 40.0%
!!! CCTCCATGATTTTAAGGTCA+GGG + chr6_3:11937349-11937368 None:intergenic 40.0%
GGTCAATTGTGATTGTGATG+TGG + chr6_3:11937415-11937434 None:intergenic 40.0%
ACACTGTTCTACACTTCAAC+AGG + chr6_3:11937723-11937742 None:intergenic 40.0%
TATAGAGAGAGAGAGATACG+CGG - chr6_3:11937975-11937994 Msa0939800:intron 40.0%
TGGCAATGTGAGTTTGAAAG+TGG - chr6_3:11938034-11938053 Msa0939800:intron 40.0%
TTAGTAAAGTCCCTTCCAAG+GGG + chr6_3:11938085-11938104 None:intergenic 40.0%
CTTAGTAAAGTCCCTTCCAA+GGG + chr6_3:11938086-11938105 None:intergenic 40.0%
GTTCAAAGAAGGTTGGAATG+AGG - chr6_3:11938919-11938938 Msa0939800:intron 40.0%
TTTAGGGAGGTTATTGAGGA+AGG - chr6_3:11938951-11938970 Msa0939800:intron 40.0%
!!! TTTGGTTTTTGTGGGAAGAG+AGG + chr6_3:11939616-11939635 None:intergenic 40.0%
TTAGGAGTGAAGAGTTAACG+GGG + chr6_3:11939885-11939904 None:intergenic 40.0%
GTGGAAATAGGCAAATAGTG+AGG + chr6_3:11939954-11939973 None:intergenic 40.0%
GTGTATGAGGATACTAAGAG+TGG + chr6_3:11939973-11939992 None:intergenic 40.0%
!!! TGACTTCCAGTGTTTTGATC+AGG - chr6_3:11940587-11940606 Msa0939800:intron 40.0%
TGACTCAAACAGGATGAGAA+TGG + chr6_3:11940616-11940635 Msa0939810:intron 40.0%
TACATCTCTCTGACTCAAAC+AGG + chr6_3:11940626-11940645 Msa0939810:intron 40.0%
!! ACGCTGTTTTACACTTCAAC+AGG - chr6_3:11940738-11940757 Msa0939800:intron 40.0%
TTTCATGCAACCTAGGGATT+TGG - chr6_3:11941025-11941044 Msa0939800:intron 40.0%
AAGACGGAATGTGGTAAACT+CGG + chr6_3:11941087-11941106 Msa0939810:intron 40.0%
AAGTCTATGTGGCCATTGTT+AGG - chr6_3:11941149-11941168 Msa0939800:intron 40.0%
AGTCTATGTGGCCATTGTTA+GGG - chr6_3:11941150-11941169 Msa0939800:intron 40.0%
AAACTTAGACCTTAGGGTTG+TGG + chr6_3:11941191-11941210 Msa0939810:CDS 40.0%
ATGTGACCTCAATTATGGTC+GGG - chr6_3:11941293-11941312 Msa0939800:intron 40.0%
ATATTTCCATGTGGGTCAAG+TGG + chr6_3:11941594-11941613 Msa0939810:intron 40.0%
TCTCAATGTGTTATCAGTGG+CGG - chr6_3:11941767-11941786 Msa0939800:intron 40.0%
CGGAGCCAGACAAAAAAAAT+TGG - chr6_3:11941787-11941806 Msa0939800:intron 40.0%
AAAAGCCAAACCAAGTCTAC+TGG - chr6_3:11941943-11941962 Msa0939800:intron 40.0%
GAAACTAGAAAGCCACACAA+AGG - chr6_3:11941974-11941993 Msa0939800:intron 40.0%
TATGTGAGCATAGTAGTTGC+TGG + chr6_3:11942023-11942042 Msa0939810:intron 40.0%
! GGACTGATATGTTGTTGTTG+CGG + chr6_3:11942169-11942188 Msa0939810:intron 40.0%
!!! ACTCTGTCTCTGTTTTGGTA+TGG - chr6_3:11942330-11942349 Msa0939800:intron 40.0%
TTCAACCTAACTACCTAGGA+AGG - chr6_3:11942418-11942437 Msa0939800:intron 40.0%
AAAAGCCTTCCTAGGTAGTT+AGG + chr6_3:11942426-11942445 Msa0939810:intron 40.0%
!!! TTCCCCCTTTTGATTTGCTT+AGG - chr6_3:11942682-11942701 Msa0939800:intron 40.0%
!!! TCCCCCTTTTGATTTGCTTA+GGG - chr6_3:11942683-11942702 Msa0939800:intron 40.0%
ACCCTAAGCAAATCAAAAGG+GGG + chr6_3:11942687-11942706 Msa0939810:CDS 40.0%
AGAGATGGAGACAAATGAAG+AGG - chr6_3:11942836-11942855 Msa0939800:intron 40.0%
TGTTAGGCGAAAAGCAAACA+TGG + chr6_3:11943343-11943362 None:intergenic 40.0%
GCCTAACAAACTTTACCTCA+AGG - chr6_3:11943355-11943374 Msa0939800:intron 40.0%
ACTTTACCTCAAGGTCAGAA+TGG - chr6_3:11943364-11943383 Msa0939800:intron 40.0%
CTTTACCTCAAGGTCAGAAT+GGG - chr6_3:11943365-11943384 Msa0939800:intron 40.0%
TGTATTTCTCCCCACAGATT+TGG + chr6_3:11943441-11943460 None:intergenic 40.0%
AATACAGTCCACTAGAGTAC+GGG - chr6_3:11943455-11943474 Msa0939800:intron 40.0%
TATTCATCAAGGGTGGAGAA+AGG + chr6_3:11943499-11943518 None:intergenic 40.0%
GGTTCTTGAGGATGAATCAT+TGG + chr6_3:11943551-11943570 None:intergenic 40.0%
AGCATGTTTCCACGTCATTT+GGG - chr6_3:11943579-11943598 Msa0939800:intron 40.0%
GAGATTTCATAGAGAGCTGA+TGG + chr6_3:11943658-11943677 None:intergenic 40.0%
! CATTTCAGCCATCTGAAACT+CGG - chr6_3:11943690-11943709 Msa0939800:intron 40.0%
GAAAGAAGTCAAAACTGTGC+AGG + chr6_3:11943769-11943788 None:intergenic 40.0%
AGGAAAATGCAGACACAGTA+GGG + chr6_3:11943908-11943927 None:intergenic 40.0%
CAACTACGTGTTCAACTACA+TGG + chr6_3:11943974-11943993 None:intergenic 40.0%
! AGAAAATTGCGAGCCTTATG+TGG - chr6_3:11944040-11944059 Msa0939800:intron 40.0%
!! TTCAGGAAGACAAAGTGTTG+TGG + chr6_3:11944189-11944208 None:intergenic 40.0%
TTCCTGAACCGAGTCAAATA+AGG - chr6_3:11944201-11944220 Msa0939800:five_prime_UTR 40.0%
TCCTGAACCGAGTCAAATAA+GGG - chr6_3:11944202-11944221 Msa0939800:five_prime_UTR 40.0%
! GGAAACTCCCTTATTTGACT+CGG + chr6_3:11944212-11944231 None:intergenic 40.0%
!! CGATTTGTTGTCTGTTGAAG+GGG + chr6_3:11944248-11944267 None:intergenic 40.0%
TAATAGTCGCCCCAAAATCA+AGG + chr6_3:11944347-11944366 None:intergenic 40.0%
TGAAATGTGATTCTCCCCAA+AGG - chr6_3:11944558-11944577 Msa0939800:intron 40.0%
CCGATATATGACGATAACGT+TGG + chr6_3:11944671-11944690 None:intergenic 40.0%
GATGGTCATTAGGATGGAAT+TGG - chr6_3:11944697-11944716 Msa0939800:intron 40.0%
ATGGAATTGGGCAAATAACG+AGG - chr6_3:11944710-11944729 Msa0939800:intron 40.0%
GGGCAAATAACGAGGTAATA+TGG - chr6_3:11944718-11944737 Msa0939800:intron 40.0%
! TGAGTTACTCTCCTTTTGTC+TGG + chr6_3:11945074-11945093 None:intergenic 40.0%
! GTTGTTTCCATATATCCTGG+AGG - chr6_3:11945281-11945300 Msa0939800:intron 40.0%
!! ACGCAACAAGTTGGAGTTTT+CGG + chr6_3:11945694-11945713 None:intergenic 40.0%
! ACGCATTTCCTTTTTCTGTG+TGG - chr6_3:11946015-11946034 Msa0939800:five_prime_UTR 40.0%
! TGTGTCCTATTCAAGTTCAC+TGG - chr6_3:11946127-11946146 Msa0939800:intron 40.0%
ATGTGCCAGTGAACTTGAAT+AGG + chr6_3:11946135-11946154 None:intergenic 40.0%
ACAGGACGAATTACTCAGAT+TGG - chr6_3:11946211-11946230 Msa0939800:intron 40.0%
GATGTAAGTACTTGTGAGAC+TGG + chr6_3:11946585-11946604 None:intergenic 40.0%
AAGGATTTACTCATGCAAGC+CGG - chr6_3:11946758-11946777 Msa0939800:five_prime_UTR 40.0%
!!! GTTAGAGCTACTTTTCCGAA+AGG - chr6_3:11946799-11946818 Msa0939800:five_prime_UTR 40.0%
! ATAAAGATTGGGCTTTTCCC+CGG - chr6_3:11946840-11946859 Msa0939800:five_prime_UTR 40.0%
AACCATGGATAAGCATCAGT+TGG + chr6_3:11946902-11946921 None:intergenic 40.0%
TTGGACACCAGATGGTTATG+TGG - chr6_3:11931293-11931312 Msa0939800:intron 45.0%
!! TTAGAGTTTTGTCGCCCTTG+CGG - chr6_3:11931465-11931484 Msa0939800:intron 45.0%
GACACATAATGAATCCGGGA+TGG - chr6_3:11931787-11931806 Msa0939800:intron 45.0%
ATGAATCCGGGATGGACATT+AGG - chr6_3:11931795-11931814 Msa0939800:intron 45.0%
GATGGACATTAGGATGGACA+TGG - chr6_3:11931805-11931824 Msa0939800:intron 45.0%
! GGGATTTTCTTGCAGCAATG+AGG + chr6_3:11931912-11931931 None:intergenic 45.0%
GGAGAAGGTCTACAACTGTA+GGG + chr6_3:11931932-11931951 None:intergenic 45.0%
AAAGCCGATATAGCTTCTGC+AGG + chr6_3:11932026-11932045 None:intergenic 45.0%
! CAAGTTAGTGTTGGACAAGC+TGG - chr6_3:11932047-11932066 Msa0939800:CDS 45.0%
! GTGGAAGGAACAACTTTTGC+AGG + chr6_3:11932146-11932165 None:intergenic 45.0%
GGTGTAAGGAAATTGGTGGA+AGG + chr6_3:11932161-11932180 None:intergenic 45.0%
!! CTCTAAGATTCTGAGCATGG+TGG - chr6_3:11932816-11932835 Msa0939800:CDS 45.0%
CATGCCAGTGAACCCTAATT+GGG + chr6_3:11932900-11932919 None:intergenic 45.0%
ACATGCCAGTGAACCCTAAT+TGG + chr6_3:11932901-11932920 None:intergenic 45.0%
CTATTGGCGAGTCAAAATCG+CGG - chr6_3:11932939-11932958 Msa0939800:intron 45.0%
GATGACACTGGCATGTTCTA+TGG - chr6_3:11933409-11933428 Msa0939800:intron 45.0%
ACTAATGGAAGCTGGACCAA+AGG - chr6_3:11933453-11933472 Msa0939800:intron 45.0%
CTAATGGAAGCTGGACCAAA+GGG - chr6_3:11933454-11933473 Msa0939800:intron 45.0%
CCATCCTTGCTTGAATGTGA+AGG + chr6_3:11933521-11933540 None:intergenic 45.0%
CCTTCACATTCAAGCAAGGA+TGG - chr6_3:11933518-11933537 Msa0939800:intron 45.0%
AGAAAAGGGTAGGTATCAGG+TGG + chr6_3:11933592-11933611 None:intergenic 45.0%
GGGCAGAATTAGGGAGAAAA+GGG + chr6_3:11933606-11933625 None:intergenic 45.0%
CAAAGACCTTGGAGAGCTTA+TGG + chr6_3:11934053-11934072 None:intergenic 45.0%
TTCCTTCCTTGCTTTGGTGA+TGG + chr6_3:11934538-11934557 None:intergenic 45.0%
GGTAACCATGGATAAGCATC+AGG - chr6_3:11934582-11934601 Msa0939800:intron 45.0%
AACCATGGATAAGCATCAGG+TGG - chr6_3:11934585-11934604 Msa0939800:intron 45.0%
! ATAAAGGTTGGGCTTTTCCC+CGG + chr6_3:11934647-11934666 None:intergenic 45.0%
GATGATACCGCAATGCTTTG+GGG + chr6_3:11934765-11934784 None:intergenic 45.0%
CAGATGATACCGCAATGCTT+TGG + chr6_3:11934767-11934786 None:intergenic 45.0%
ATCGACCCGTAAGGAGTTAT+TGG - chr6_3:11935010-11935029 Msa0939800:intron 45.0%
! CCCGTAAGGAGTTATTGGTT+TGG - chr6_3:11935015-11935034 Msa0939800:intron 45.0%
GCTTAATGTGCCAGTGAACT+CGG - chr6_3:11935170-11935189 Msa0939800:intron 45.0%
CATTTGGCCTCGGTTGTTAA+CGG + chr6_3:11935253-11935272 None:intergenic 45.0%
GTTAACAACCGAGGCCAAAT+GGG - chr6_3:11935252-11935271 Msa0939800:intron 45.0%
AATTGACGAACCCGTTCAGA+AGG - chr6_3:11935461-11935480 Msa0939800:intron 45.0%
! TGAGTCACTCTCCTTTTGTC+TGG - chr6_3:11935977-11935996 Msa0939800:intron 45.0%
GCTTGTCCACATGTATAACC+TGG - chr6_3:11936031-11936050 Msa0939800:intron 45.0%
!! AATTTCACCCTGAAAGCACC+TGG + chr6_3:11936058-11936077 None:intergenic 45.0%
!! CGGCAGTTTGACAGTTTTGT+TGG - chr6_3:11936081-11936100 Msa0939800:intron 45.0%
!! GCGTCATTTCAGGTTATCGT+TGG + chr6_3:11936121-11936140 None:intergenic 45.0%
GGAAGTCAGACAACTGAACA+AGG + chr6_3:11936301-11936320 None:intergenic 45.0%
ATGGACATGGGCAAAGAAAG+AGG + chr6_3:11936341-11936360 None:intergenic 45.0%
GATGGTCATTAGGATGGACA+TGG + chr6_3:11936354-11936373 None:intergenic 45.0%
TATCGTCATATATCGGCACC+TGG + chr6_3:11944675-11944694 None:intergenic 45.0%
GAAGTTGTTCATCGTAACGG+TGG - chr6_3:11936402-11936421 Msa0939800:intron 45.0%
ATCATAAGCTGGACAGCTGA+TGG + chr6_3:11936586-11936605 None:intergenic 45.0%
ATGATCCGCTTGACCCAAAT+GGG + chr6_3:11936630-11936649 None:intergenic 45.0%
TATGATCCGCTTGACCCAAA+TGG + chr6_3:11936631-11936650 None:intergenic 45.0%
! ACCGCGATTTAAAACCTTGG+TGG + chr6_3:11936868-11936887 None:intergenic 45.0%
GCCGTATCAGTAGTGTTTAC+TGG + chr6_3:11936942-11936961 None:intergenic 45.0%
CATAAGGCCACCAAAATTGG+AGG + chr6_3:11936965-11936984 None:intergenic 45.0%
TCGCATAAGGCCACCAAAAT+TGG + chr6_3:11936968-11936987 None:intergenic 45.0%
!! AGTTCTGGGAAGCTCAAAAG+AGG - chr6_3:11937154-11937173 Msa0939800:intron 45.0%
TGGGTGCATGTTTGGATTGA+CGG + chr6_3:11937226-11937245 None:intergenic 45.0%
GTGAAATGGGACCTCAATTG+AGG + chr6_3:11937281-11937300 None:intergenic 45.0%
CCCTGACCTTAAAATCATGG+AGG - chr6_3:11937346-11937365 Msa0939800:intron 45.0%
!!! GCCTCCATGATTTTAAGGTC+AGG + chr6_3:11937350-11937369 None:intergenic 45.0%
ATAGAGAGAGAGAGATACGC+GGG - chr6_3:11937976-11937995 Msa0939800:intron 45.0%
CCTTAGTAAAGTCCCTTCCA+AGG + chr6_3:11938087-11938106 None:intergenic 45.0%
CCTTGGAAGGGACTTTACTA+AGG - chr6_3:11938084-11938103 Msa0939800:intron 45.0%
GGAAGGGACTTTACTAAGGT+AGG - chr6_3:11938088-11938107 Msa0939800:intron 45.0%
!! AATGGTGGACCCTACTCATT+AGG - chr6_3:11938191-11938210 Msa0939800:intron 45.0%
TCAGGTTTAGAGAGACCTCA+AGG - chr6_3:11938356-11938375 Msa0939800:intron 45.0%
AGACGAATGAAAGGAACACC+TGG - chr6_3:11938694-11938713 Msa0939800:intron 45.0%
TGAAAGGAACACCTGGCTTA+AGG - chr6_3:11938701-11938720 Msa0939800:intron 45.0%
! CTTTGAACTTTGAAGGGCCA+AGG + chr6_3:11938907-11938926 None:intergenic 45.0%
GGCCCTTCAAAGTTCAAAGA+AGG - chr6_3:11938908-11938927 Msa0939800:intron 45.0%
GAGGTAGAGACTATTTAGGG+AGG - chr6_3:11938938-11938957 Msa0939800:intron 45.0%
GGAGGTTATTGAGGAAGGAA+GGG - chr6_3:11938956-11938975 Msa0939800:intron 45.0%
! TGTACTTGCCTTTTGGCAAG+TGG - chr6_3:11939317-11939336 Msa0939800:intron 45.0%
! GTACTTGCCTTTTGGCAAGT+GGG - chr6_3:11939318-11939337 Msa0939800:intron 45.0%
GTCAAATGCAATGAGGGGTA+GGG + chr6_3:11939695-11939714 None:intergenic 45.0%
TACGGCGTCAAATGCAATGA+GGG + chr6_3:11939701-11939720 None:intergenic 45.0%
! CAGAGACTCAGAGTACTTGA+AGG - chr6_3:11939926-11939945 Msa0939800:intron 45.0%
TGGTTGCCTGATCAAAACAC+TGG + chr6_3:11940596-11940615 Msa0939810:intron 45.0%
! AACCTAGGGATTTGGTTGTG+AGG - chr6_3:11941033-11941052 Msa0939800:intron 45.0%
ACACACTGAAAGACGGAATG+TGG + chr6_3:11941096-11941115 Msa0939810:intron 45.0%
TTAGGGTTGTGGAGACATGT+GGG + chr6_3:11941180-11941199 Msa0939810:intron 45.0%
ACACAACCCGACCATAATTG+AGG + chr6_3:11941302-11941321 Msa0939810:intron 45.0%
CACACGAGACACAAAGTTTC+TGG + chr6_3:11941417-11941436 Msa0939810:intron 45.0%
TATGATCCACTTGACCCACA+TGG - chr6_3:11941585-11941604 Msa0939800:intron 45.0%
! GTGTACCAGTAGACTTGGTT+TGG + chr6_3:11941951-11941970 Msa0939810:intron 45.0%
ACCAAGTCTACTGGTACACA+AGG - chr6_3:11941952-11941971 Msa0939800:intron 45.0%
TCCTTGTGTACCAGTAGACT+TGG + chr6_3:11941956-11941975 Msa0939810:intron 45.0%
! AGAATGTTGGTGCCTTTGTG+TGG + chr6_3:11941989-11942008 Msa0939810:intron 45.0%
ACTTACTCAGCTAGGGTTTG+TGG - chr6_3:11942812-11942831 Msa0939800:intron 45.0%
CTTACTCAGCTAGGGTTTGT+GGG - chr6_3:11942813-11942832 Msa0939800:intron 45.0%
AAGACGAGTGAGATGAGTGT+GGG - chr6_3:11942891-11942910 Msa0939800:intron 45.0%
GTTCGATGGAGAGTTAGAGA+AGG - chr6_3:11942920-11942939 Msa0939800:intron 45.0%
AGTACTGCAATCGCTAGAGA+AGG - chr6_3:11942975-11942994 Msa0939800:intron 45.0%
!! CGAAAATAATGGGTAGGCCA+TGG - chr6_3:11943090-11943109 Msa0939800:intron 45.0%
GAATCGACACATAACAGTGG+CGG + chr6_3:11943139-11943158 Msa0939810:CDS 45.0%
!! GATGCCGGTTAAGTTGGTTT+CGG + chr6_3:11943228-11943247 Msa0939810:CDS 45.0%
ATGGTGACTAGACCAAGAAC+AGG - chr6_3:11943293-11943312 Msa0939800:intron 45.0%
ACTCAGAAGCTCCAAATCTG+TGG - chr6_3:11943427-11943446 Msa0939800:intron 45.0%
CTCAGAAGCTCCAAATCTGT+GGG - chr6_3:11943428-11943447 Msa0939800:intron 45.0%
TCAGAAGCTCCAAATCTGTG+GGG - chr6_3:11943429-11943448 Msa0939800:intron 45.0%
! GTCGGTTGGCTATTCATCAA+GGG + chr6_3:11943509-11943528 None:intergenic 45.0%
GTTCATGGAAGCAATTCGGT+CGG + chr6_3:11943527-11943546 None:intergenic 45.0%
TGGCGTTCATGGAAGCAATT+CGG + chr6_3:11943531-11943550 None:intergenic 45.0%
GGATGAATCATTGGCGTTCA+TGG + chr6_3:11943542-11943561 None:intergenic 45.0%
GTGGAAACATGCTCAGTTGA+CGG + chr6_3:11943572-11943591 None:intergenic 45.0%
GAGCATGTTTCCACGTCATT+TGG - chr6_3:11943578-11943597 Msa0939800:intron 45.0%
GGAGGTTTGCGATTCTGTTA+TGG + chr6_3:11943887-11943906 None:intergenic 45.0%
AAAATGCAGACACAGTAGGG+AGG + chr6_3:11943905-11943924 None:intergenic 45.0%
CAGGAAAATGCAGACACAGT+AGG + chr6_3:11943909-11943928 None:intergenic 45.0%
! CTACTGTGTCTGCATTTTCC+TGG - chr6_3:11943907-11943926 Msa0939800:intron 45.0%
! AGGCTCGCAATTTTCTATGG+TGG + chr6_3:11944036-11944055 None:intergenic 45.0%
ATCGTATCAAAACCACGTGC+CGG + chr6_3:11944098-11944117 None:intergenic 45.0%
CAGCACAGCAATACTGTATC+CGG - chr6_3:11944129-11944148 Msa0939800:five_prime_UTR 45.0%
GGTCTATACTCAGTGAAGTC+CGG + chr6_3:11944151-11944170 None:intergenic 45.0%
!! AGACAAAGTGTTGTGGCAAG+AGG + chr6_3:11944182-11944201 None:intergenic 45.0%
!! TCCCTTATTTGACTCGGTTC+AGG + chr6_3:11944206-11944225 None:intergenic 45.0%
ACGTACTGGAGTACACCTTT+GGG + chr6_3:11944576-11944595 None:intergenic 45.0%
TAACAACAGCCTGTTAGACG+AGG + chr6_3:11944635-11944654 None:intergenic 45.0%
TATCGTCATATATCGGCACC+TGG - chr6_3:11944675-11944694 Msa0939800:intron 45.0%
TTCCATCCTAATGACCATCC+AGG + chr6_3:11944696-11944715 None:intergenic 45.0%
GGAAGTAAATCTACGACCGT+TGG + chr6_3:11944825-11944844 None:intergenic 45.0%
ACGGTCGTAGATTTACTTCC+TGG - chr6_3:11944825-11944844 Msa0939800:five_prime_UTR 45.0%
CGGTCGTAGATTTACTTCCT+GGG - chr6_3:11944826-11944845 Msa0939800:five_prime_UTR 45.0%
! TGTTGATTATAAGGCGTCCC+AGG + chr6_3:11944846-11944865 None:intergenic 45.0%
! TCAGCATTTCAAGTCAGCGT+CGG - chr6_3:11944930-11944949 Msa0939800:five_prime_UTR 45.0%
AATTTCACCTTGCAAGCACC+TGG - chr6_3:11944993-11945012 Msa0939800:five_prime_UTR 45.0%
! GTAGGCTTCACAACTTTTGC+TGG + chr6_3:11945038-11945057 None:intergenic 45.0%
! AAAGGCGTGGTACTATTCGT+TGG + chr6_3:11946087-11946106 None:intergenic 45.0%
AACGAATAGTACCACGCCTT+TGG - chr6_3:11946086-11946105 Msa0939800:intron 45.0%
AGTACATTGAACCAAAGGCG+TGG + chr6_3:11946100-11946119 None:intergenic 45.0%
CTGTACATTACCAGTAGGAC+CGG + chr6_3:11946780-11946799 None:intergenic 45.0%
CCATTGAAATAGATCCTCCG+GGG + chr6_3:11946860-11946879 None:intergenic 45.0%
GCCATTGAAATAGATCCTCC+GGG + chr6_3:11946861-11946880 None:intergenic 45.0%
CGCCATTGAAATAGATCCTC+CGG + chr6_3:11946862-11946881 None:intergenic 45.0%
CATGGATAAGCATCAGTTGG+TGG + chr6_3:11946899-11946918 None:intergenic 45.0%
CACCAACTGATGCTTATCCA+TGG - chr6_3:11946897-11946916 Msa0939800:five_prime_UTR 45.0%
!! AATAATAAAATAATAACAAA+GGG + chr6_3:11932543-11932562 None:intergenic 5.0%
!! TAATAATAAAATAATAACAA+AGG + chr6_3:11932544-11932563 None:intergenic 5.0%
!! TAAAAAAAATTAACTAATAA+TGG - chr6_3:11937934-11937953 Msa0939800:intron 5.0%
!! TTTCTAATATTAATATTAAT+AGG + chr6_3:11941688-11941707 Msa0939810:CDS 5.0%
TTAGTCAGGAAGGACCGCAA+GGG + chr6_3:11931482-11931501 None:intergenic 50.0%
TTTAGTCAGGAAGGACCGCA+AGG + chr6_3:11931483-11931502 None:intergenic 50.0%
ATCCGGGATGGACATTAGGA+TGG - chr6_3:11931799-11931818 Msa0939800:intron 50.0%
GTCCATCCTAATGTCCATCC+CGG + chr6_3:11931804-11931823 None:intergenic 50.0%
GGAGCTCAAACCACAGAACA+AGG - chr6_3:11931858-11931877 Msa0939800:intron 50.0%
GGGAGAAGGTCTACAACTGT+AGG + chr6_3:11931933-11931952 None:intergenic 50.0%
ACAGTTGTAGACCTTCTCCC+TGG - chr6_3:11931933-11931952 Msa0939800:intron 50.0%
TGTAAGGTACACCAGGGAGA+AGG + chr6_3:11931947-11931966 None:intergenic 50.0%
AAGGTGGAGTCGTTTCAGCA+TGG - chr6_3:11931991-11932010 Msa0939800:intron 50.0%
AGGTGGAGTCGTTTCAGCAT+GGG - chr6_3:11931992-11932011 Msa0939800:intron 50.0%
AGCTGGTACCACAAACCGAA+CGG - chr6_3:11932064-11932083 Msa0939800:CDS 50.0%
CCACAAGTATAACCAGGTCC+AGG + chr6_3:11932122-11932141 None:intergenic 50.0%
CCTGGACCTGGTTATACTTG+TGG - chr6_3:11932119-11932138 Msa0939800:CDS 50.0%
! ACTGCAGCCCTTTTGTTGCT+TGG + chr6_3:11932311-11932330 None:intergenic 50.0%
TGTGCCCAATTAGGGTTCAC+TGG - chr6_3:11932893-11932912 Msa0939800:CDS 50.0%
AAAGGGTAGGTATCAGGTGG+AGG + chr6_3:11933589-11933608 None:intergenic 50.0%
GGGAGAAAAGGGTAGGTATC+AGG + chr6_3:11933595-11933614 None:intergenic 50.0%
GGGGCAGAATTAGGGAGAAA+AGG + chr6_3:11933607-11933626 None:intergenic 50.0%
GTCTTGCAGGGGCAGAATTA+GGG + chr6_3:11933615-11933634 None:intergenic 50.0%
AGTCTTGCAGGGGCAGAATT+AGG + chr6_3:11933616-11933635 None:intergenic 50.0%
AAACCAAAGCACGGCATCCA+TGG + chr6_3:11934382-11934401 None:intergenic 50.0%
ATGGATGCCGTGCTTTGGTT+TGG - chr6_3:11934381-11934400 Msa0939800:intron 50.0%
TAGCAGAATTGCGCGTACCA+CGG - chr6_3:11934465-11934484 Msa0939800:intron 50.0%
!! TGCTTTGGTGATGGCTTCGT+TGG + chr6_3:11934529-11934548 None:intergenic 50.0%
ACGAAGCCATCACCAAAGCA+AGG - chr6_3:11934529-11934548 Msa0939800:intron 50.0%
AGCCATCACCAAAGCAAGGA+AGG - chr6_3:11934533-11934552 Msa0939800:intron 50.0%
GAACCGGCATTAGGTAACCA+TGG - chr6_3:11934570-11934589 Msa0939800:intron 50.0%
CACCACCTGATGCTTATCCA+TGG + chr6_3:11934590-11934609 None:intergenic 50.0%
CATGGATAAGCATCAGGTGG+TGG - chr6_3:11934588-11934607 Msa0939800:intron 50.0%
CGCCGTTGAAATAGATCCTC+CGG - chr6_3:11934625-11934644 Msa0939800:intron 50.0%
GCCGTTGAAATAGATCCTCC+GGG - chr6_3:11934626-11934645 Msa0939800:intron 50.0%
CCCCGGAGGATCTATTTCAA+CGG + chr6_3:11946857-11946876 None:intergenic 50.0%
CCGTTGAAATAGATCCTCCG+GGG - chr6_3:11934627-11934646 Msa0939800:intron 50.0%
!! CAAGGAGTATTGGCGCGTAA+AGG + chr6_3:11946167-11946186 None:intergenic 50.0%
ATGTGCCAGTGAACTCGGAT+AGG - chr6_3:11935175-11935194 Msa0939800:intron 50.0%
TGTGTCCTATCCGAGTTCAC+TGG + chr6_3:11935183-11935202 None:intergenic 50.0%
TGGAAAGCCGTTAACAACCG+AGG - chr6_3:11935243-11935262 Msa0939800:intron 50.0%
CGTTAACAACCGAGGCCAAA+TGG - chr6_3:11935251-11935270 Msa0939800:intron 50.0%
CAAGGCAACTCACCTCAATC+AGG + chr6_3:11935530-11935549 None:intergenic 50.0%
CTGATTGAGGTGAGTTGCCT+TGG - chr6_3:11935528-11935547 Msa0939800:intron 50.0%
CCTGGACCAGGTTATACATG+TGG + chr6_3:11945011-11945030 None:intergenic 50.0%
CCACATGTATAACCTGGTCC+AGG - chr6_3:11936037-11936056 Msa0939800:intron 50.0%
! CAGGTTATCGTTGGTAGAGC+TGG + chr6_3:11936112-11936131 None:intergenic 50.0%
! AGGTGGAGTACTCAGCTCAT+GGG + chr6_3:11936167-11936186 None:intergenic 50.0%
! AAGGTGGAGTACTCAGCTCA+TGG + chr6_3:11936168-11936187 None:intergenic 50.0%
GTCCATCCTAATGACCATCC+AGG - chr6_3:11936355-11936374 Msa0939800:intron 50.0%
CACCTGGATGGTCATTAGGA+TGG + chr6_3:11944691-11944710 None:intergenic 50.0%
GTCATATATCGGCACCTGGA+TGG + chr6_3:11944679-11944698 None:intergenic 50.0%
! CTGATACGGCCCTCCAATTT+TGG - chr6_3:11936952-11936971 Msa0939800:intron 50.0%
! ATACGGCCCTCCAATTTTGG+TGG - chr6_3:11936955-11936974 Msa0939800:intron 50.0%
!!! TTTTGGTGGCCTTATGCGAC+AGG - chr6_3:11936969-11936988 Msa0939800:intron 50.0%
!! TTTGGTGGCCTTATGCGACA+GGG - chr6_3:11936970-11936989 Msa0939800:intron 50.0%
TCATGTTGCAGCCCAGATTG+TGG + chr6_3:11937021-11937040 None:intergenic 50.0%
! CTCAATTGAGGTCGAGTTGC+GGG + chr6_3:11937269-11937288 None:intergenic 50.0%
! CCTCAATTGAGGTCGAGTTG+CGG + chr6_3:11937270-11937289 None:intergenic 50.0%
TAGAGAGAGAGAGATACGCG+GGG - chr6_3:11937977-11937996 Msa0939800:intron 50.0%
TGCAAGTACACCCCTTGGAA+GGG - chr6_3:11938072-11938091 Msa0939800:intron 50.0%
TTAGAGTTCGCTGAGCCTTG+AGG + chr6_3:11938374-11938393 None:intergenic 50.0%
AGGAACACCTGGCTTAAGGT+TGG - chr6_3:11938705-11938724 Msa0939800:intron 50.0%
! GTTGGTTCCAACCTTAAGCC+AGG + chr6_3:11938715-11938734 None:intergenic 50.0%
GGGAGGTTATTGAGGAAGGA+AGG - chr6_3:11938955-11938974 Msa0939800:intron 50.0%
!! GGAAGGAAGGGTGTGTTTTG+TGG - chr6_3:11938968-11938987 Msa0939800:intron 50.0%
!! AAGGGTGTGTTTTGTGGCGT+GGG - chr6_3:11938974-11938993 Msa0939800:intron 50.0%
TGAGGATCCCACTTGCCAAA+AGG + chr6_3:11939328-11939347 None:intergenic 50.0%
CGTCAAATGCAATGAGGGGT+AGG + chr6_3:11939696-11939715 None:intergenic 50.0%
ACGGCGTCAAATGCAATGAG+GGG + chr6_3:11939700-11939719 None:intergenic 50.0%
CTACGGCGTCAAATGCAATG+AGG + chr6_3:11939702-11939721 None:intergenic 50.0%
GAGTGAAGAGTTAACGGGGT+AGG + chr6_3:11939881-11939900 None:intergenic 50.0%
CACTAGAAGGGATTCAGGGA+AGG + chr6_3:11940079-11940098 Msa0939810:CDS 50.0%
GGCTCACTAGAAGGGATTCA+GGG + chr6_3:11940083-11940102 Msa0939810:CDS 50.0%
TGGCTCACTAGAAGGGATTC+AGG + chr6_3:11940084-11940103 Msa0939810:CDS 50.0%
GTCCTCACAACCAAATCCCT+AGG + chr6_3:11941038-11941057 Msa0939810:intron 50.0%
! ATGTGGGGCATCCCTAACAA+TGG + chr6_3:11941164-11941183 Msa0939810:intron 50.0%
TAGGGTTGTGGAGACATGTG+GGG + chr6_3:11941179-11941198 Msa0939810:intron 50.0%
CTTAGGGTTGTGGAGACATG+TGG + chr6_3:11941181-11941200 Msa0939810:intron 50.0%
CACATGTCTCCACAACCCTA+AGG - chr6_3:11941179-11941198 Msa0939800:intron 50.0%
! CTACCTGCTACGTCTTGTTC+AGG + chr6_3:11941889-11941908 Msa0939810:intron 50.0%
GAACAAGACGTAGCAGGTAG+AGG - chr6_3:11941889-11941908 Msa0939800:intron 50.0%
! ATGTTGTTGTTGCGGCTGCT+AGG + chr6_3:11942161-11942180 Msa0939810:intron 50.0%
GAAGACGAGTGAGATGAGTG+TGG - chr6_3:11942890-11942909 Msa0939800:intron 50.0%
!! AGTGTGGGTTTCGAGTTCGA+TGG - chr6_3:11942906-11942925 Msa0939800:intron 50.0%
! GGTTGCTCATACGCTTGCTA+GGG + chr6_3:11943322-11943341 Msa0939810:CDS 50.0%
TGGTTGCTCATACGCTTGCT+AGG + chr6_3:11943323-11943342 Msa0939810:CDS 50.0%
AGCTTCCCATTCTGACCTTG+AGG + chr6_3:11943373-11943392 None:intergenic 50.0%
! GGTTGGCTATTCATCAAGGG+TGG + chr6_3:11943506-11943525 None:intergenic 50.0%
! GGTCGGTTGGCTATTCATCA+AGG + chr6_3:11943510-11943529 None:intergenic 50.0%
ATGGAAGCAATTCGGTCGGT+TGG + chr6_3:11943523-11943542 None:intergenic 50.0%
TGCTCAGTTGACGGTTCTTG+AGG + chr6_3:11943563-11943582 None:intergenic 50.0%
GCTGATGGTACTGCTTCTAC+TGG + chr6_3:11943643-11943662 None:intergenic 50.0%
GGATCTGAATCACTCTGCAG+AGG + chr6_3:11943748-11943767 None:intergenic 50.0%
GTGCTTCGTCATCCGACTTA+GGG + chr6_3:11943821-11943840 None:intergenic 50.0%
CTAAGTCGGATGACGAAGCA+CGG - chr6_3:11943820-11943839 Msa0939800:intron 50.0%
!!! CGATGACCTGTTTTGGAACG+AGG + chr6_3:11943847-11943866 None:intergenic 50.0%
CGTTCCAAAACAGGTCATCG+CGG - chr6_3:11943847-11943866 Msa0939800:intron 50.0%
TGAACCAACTTAGCTCACGC+TGG - chr6_3:11943992-11944011 Msa0939800:intron 50.0%
CACAGCTTATTCCACTCACC+CGG - chr6_3:11944076-11944095 Msa0939800:intron 50.0%
TCGTATCAAAACCACGTGCC+GGG + chr6_3:11944097-11944116 None:intergenic 50.0%
!!! GGCACGTGGTTTTGATACGA+TGG - chr6_3:11944097-11944116 Msa0939800:intron 50.0%
CGGATACAGTATTGCTGTGC+TGG + chr6_3:11944131-11944150 None:intergenic 50.0%
! TGAAGGGGTGTGTGCTATTC+TGG + chr6_3:11944233-11944252 None:intergenic 50.0%
GATTGGGGGAGAGAAGAGAT+GGG + chr6_3:11944287-11944306 None:intergenic 50.0%
TGATTGGGGGAGAGAAGAGA+TGG + chr6_3:11944288-11944307 None:intergenic 50.0%
CGTACTGGAGTACACCTTTG+GGG + chr6_3:11944575-11944594 None:intergenic 50.0%
CACGTACTGGAGTACACCTT+TGG + chr6_3:11944577-11944596 None:intergenic 50.0%
AGGTGTACTCCAGTACGTGT+TGG - chr6_3:11944578-11944597 Msa0939800:intron 50.0%
! ATCGGTGTTCCAACACGTAC+TGG + chr6_3:11944590-11944609 None:intergenic 50.0%
AAGTTCCCTCCTCGTCTAAC+AGG - chr6_3:11944623-11944642 Msa0939800:intron 50.0%
AACAGCCTGTTAGACGAGGA+GGG + chr6_3:11944631-11944650 None:intergenic 50.0%
GTCATATATCGGCACCTGGA+TGG - chr6_3:11944679-11944698 Msa0939800:intron 50.0%
CACCTGGATGGTCATTAGGA+TGG - chr6_3:11944691-11944710 Msa0939800:intron 50.0%
GAGGTAATATGGGCCATCGT+GGG - chr6_3:11944729-11944748 Msa0939800:intron 50.0%
CCTGGACCAGGTTATACATG+CGG - chr6_3:11945011-11945030 Msa0939800:five_prime_UTR 50.0%
CTGGACCAGGTTATACATGC+GGG - chr6_3:11945012-11945031 Msa0939800:five_prime_UTR 50.0%
CAGAAGCCCTCCAGGATATA+TGG + chr6_3:11945291-11945310 None:intergenic 50.0%
CATATATCCTGGAGGGCTTC+TGG - chr6_3:11945289-11945308 Msa0939800:intron 50.0%
! CTTTTTACCAGAAGCCCTCC+AGG + chr6_3:11945299-11945318 None:intergenic 50.0%
TGGCAGCTGCATGAACATGT+CGG + chr6_3:11945757-11945776 None:intergenic 50.0%
ACATGTTCATGCAGCTGCCA+GGG - chr6_3:11945757-11945776 Msa0939800:five_prime_UTR 50.0%
TAGTCCAAGTGTGCCGCATT+TGG - chr6_3:11946041-11946060 Msa0939800:five_prime_UTR 50.0%
TTTGCAACCGAGGCCAAATG+CGG + chr6_3:11946057-11946076 None:intergenic 50.0%
TGGAAAGCAGTTTGCAACCG+AGG + chr6_3:11946067-11946086 None:intergenic 50.0%
!! CAAGGAGTATTGGCGCGTAA+AGG - chr6_3:11946167-11946186 Msa0939800:intron 50.0%
CATAGCTGACGACGACTCTT+AGG - chr6_3:11946427-11946446 Msa0939800:intron 50.0%
GACGACTCTTAGGTCCTGTT+TGG - chr6_3:11946437-11946456 Msa0939800:intron 50.0%
CCCCGGAGGATCTATTTCAA+TGG - chr6_3:11946857-11946876 Msa0939800:five_prime_UTR 50.0%
GGTGGAGTCGTTTCAGCATG+GGG - chr6_3:11931993-11932012 Msa0939800:intron 55.0%
!!! ACTCTTTTGGCTCCTGGACC+TGG - chr6_3:11932107-11932126 Msa0939800:CDS 55.0%
GCAGGGCCACAAGTATAACC+AGG + chr6_3:11932128-11932147 None:intergenic 55.0%
!! GCAGCCCTTTTGTTGCTTGG+AGG + chr6_3:11932308-11932327 None:intergenic 55.0%
GCAGGAGGGACAAGGTGTAA+TGG + chr6_3:11932662-11932681 None:intergenic 55.0%
TGTCCATGGATGCCGTGCTT+TGG - chr6_3:11934376-11934395 Msa0939800:intron 55.0%
!! GATGGCTTCGTTGGTAGCCT+TGG + chr6_3:11934520-11934539 None:intergenic 55.0%
CTCATGCAAGCCGGTCCTAT+TGG + chr6_3:11934720-11934739 None:intergenic 55.0%
AAGTGCGTCCCATTTGGCCT+CGG + chr6_3:11935263-11935282 None:intergenic 55.0%
CAGTCCAAGTGCGTCCCATT+TGG + chr6_3:11935269-11935288 None:intergenic 55.0%
ACATGTTCATGCGGCTGCCA+AGG + chr6_3:11935548-11935567 None:intergenic 55.0%
TGGCAGCCGCATGAACATGT+CGG - chr6_3:11935548-11935567 Msa0939800:intron 55.0%
AACCTGGTCCAGGTGCTTTC+AGG - chr6_3:11936047-11936066 Msa0939800:intron 55.0%
ACCTGGTCCAGGTGCTTTCA+GGG - chr6_3:11936048-11936067 Msa0939800:intron 55.0%
AGTACTCAGCTCATGGGCAC+AGG + chr6_3:11936161-11936180 None:intergenic 55.0%
TCGGCACCTGGATGGTCATT+AGG + chr6_3:11944687-11944706 None:intergenic 55.0%
CCGCAACTCGACCTCAATTG+AGG - chr6_3:11937267-11937286 Msa0939800:intron 55.0%
TGGTGTGCAAGTACACCCCT+TGG - chr6_3:11938067-11938086 Msa0939800:intron 55.0%
GTGCAAGTACACCCCTTGGA+AGG - chr6_3:11938071-11938090 Msa0939800:intron 55.0%
!! GAAGGGTGTGTTTTGTGGCG+TGG - chr6_3:11938973-11938992 Msa0939800:intron 55.0%
! CCTGCTACGTCTTGTTCAGG+CGG + chr6_3:11941886-11941905 Msa0939810:intron 55.0%
GCTAGGGTTTGTGGGAGAGA+TGG - chr6_3:11942821-11942840 Msa0939800:intron 55.0%
GTTAGAGAAGGCGACAGTCG+CGG - chr6_3:11942932-11942951 Msa0939800:intron 55.0%
! TAACAGTGGCGGAGCCACTT+GGG + chr6_3:11943128-11943147 Msa0939810:CDS 55.0%
! ATAACAGTGGCGGAGCCACT+TGG + chr6_3:11943129-11943148 Msa0939810:CDS 55.0%
! TGCTCATACGCTTGCTAGGG+CGG + chr6_3:11943319-11943338 Msa0939810:CDS 55.0%
! GACGGATTCCCGTACTCTAG+TGG + chr6_3:11943466-11943485 None:intergenic 55.0%
! TTGTGCTGGCCCAAATGACG+TGG + chr6_3:11943591-11943610 None:intergenic 55.0%
TGGAGAGGCCGAGTTTCAGA+TGG + chr6_3:11943701-11943720 None:intergenic 55.0%
!! TTCAGGTGGGCAAGAGCGTT+TGG + chr6_3:11943721-11943740 None:intergenic 55.0%
! CTGCAGAGGCTAGTTCAGGT+GGG + chr6_3:11943734-11943753 None:intergenic 55.0%
! TCTGCAGAGGCTAGTTCAGG+TGG + chr6_3:11943735-11943754 None:intergenic 55.0%
! CACTCTGCAGAGGCTAGTTC+AGG + chr6_3:11943738-11943757 None:intergenic 55.0%
CTTCGTCATCCGACTTAGGG+AGG + chr6_3:11943818-11943837 None:intergenic 55.0%
CGTGCTTCGTCATCCGACTT+AGG + chr6_3:11943822-11943841 None:intergenic 55.0%
CACGGACCTCGTTCCAAAAC+AGG - chr6_3:11943838-11943857 Msa0939800:intron 55.0%
! CTGTCCGCGATGACCTGTTT+TGG + chr6_3:11943854-11943873 None:intergenic 55.0%
TGCTCCAGCGTGAGCTAAGT+TGG + chr6_3:11943999-11944018 None:intergenic 55.0%
CGGGTGAGTGGAATAAGCTG+TGG + chr6_3:11944078-11944097 None:intergenic 55.0%
! TTGTGGCAAGAGGAGCGCAA+TGG + chr6_3:11944172-11944191 None:intergenic 55.0%
CAACAGCCTGTTAGACGAGG+AGG + chr6_3:11944632-11944651 None:intergenic 55.0%
TCGGCACCTGGATGGTCATT+AGG - chr6_3:11944687-11944706 Msa0939800:intron 55.0%
CGAGGTAATATGGGCCATCG+TGG - chr6_3:11944728-11944747 Msa0939800:intron 55.0%
GTAATATGGGCCATCGTGGG+AGG - chr6_3:11944732-11944751 Msa0939800:intron 55.0%
GGAGGTCAGGCAACTGAACA+AGG - chr6_3:11944750-11944769 Msa0939800:intron 55.0%
!! AAGGCGGTGTTGTCAGCTCA+TGG - chr6_3:11944883-11944902 Msa0939800:five_prime_UTR 55.0%
!! AGGCGGTGTTGTCAGCTCAT+GGG - chr6_3:11944884-11944903 Msa0939800:five_prime_UTR 55.0%
TGTTGTCAGCTCATGGGCAC+AGG - chr6_3:11944890-11944909 Msa0939800:five_prime_UTR 55.0%
! GCATTTCAAGTCAGCGTCGG+TGG - chr6_3:11944933-11944952 Msa0939800:five_prime_UTR 55.0%
CCGCATGTATAACCTGGTCC+AGG + chr6_3:11945014-11945033 None:intergenic 55.0%
GAGAGAGCGACGCAACAAGT+TGG + chr6_3:11945703-11945722 None:intergenic 55.0%
CTGCATGAACATGTCGGGCA+GGG + chr6_3:11945751-11945770 None:intergenic 55.0%
GGCAGCTGCATGAACATGTC+GGG + chr6_3:11945756-11945775 None:intergenic 55.0%
GACATGTTCATGCAGCTGCC+AGG - chr6_3:11945756-11945775 Msa0939800:five_prime_UTR 55.0%
CTGATTGAGCTGAGTTGCCC+TGG + chr6_3:11945777-11945796 None:intergenic 55.0%
CAGGGCAACTCAGCTCAATC+AGG - chr6_3:11945775-11945794 Msa0939800:five_prime_UTR 55.0%
AAGTGTGCCGCATTTGGCCT+CGG - chr6_3:11946047-11946066 Msa0939800:five_prime_UTR 55.0%
! AAGATTGGGCTTTTCCCCGG+AGG - chr6_3:11946843-11946862 Msa0939800:five_prime_UTR 55.0%
TGCGGCGCCTATCAGGTGTA+AGG + chr6_3:11932175-11932194 None:intergenic 60.0%
TGAGTCTTGCGGCGCCTATC+AGG + chr6_3:11932182-11932201 None:intergenic 60.0%
!! GTTTTGGCAGCCACATGCGC+AGG + chr6_3:11932680-11932699 None:intergenic 60.0%
! AAGGTTGGGCTTTTCCCCGG+AGG + chr6_3:11934644-11934663 None:intergenic 60.0%
GAGGCCAAATGGGACGCACT+TGG - chr6_3:11935262-11935281 Msa0939800:intron 60.0%
GGCAGCCGCATGAACATGTC+GGG - chr6_3:11935549-11935568 Msa0939800:intron 60.0%
CCCTGCCCGACATGTTCATG+CGG + chr6_3:11945748-11945767 None:intergenic 60.0%
CCGCATGAACATGTCGGGCA+GGG - chr6_3:11935554-11935573 Msa0939800:intron 60.0%
GAGAGGGCGACGCAACAAGT+TGG - chr6_3:11935602-11935621 Msa0939800:intron 60.0%
!! ACCCTGAAAGCACCTGGACC+AGG + chr6_3:11936052-11936071 None:intergenic 60.0%
CCGCCTGAACAAGACGTAGC+AGG - chr6_3:11941883-11941902 Msa0939800:intron 60.0%
ACTACCTCCGTCCATCAGCC+AGG + chr6_3:11942958-11942977 Msa0939810:intron 60.0%
! AACAGTGGCGGAGCCACTTG+GGG + chr6_3:11943127-11943146 Msa0939810:CDS 60.0%
TTGCTAGGGCGGCCTGTTCT+TGG + chr6_3:11943308-11943327 Msa0939810:CDS 60.0%
CGCTGAGTGTGCGTTTGTGC+TGG + chr6_3:11943605-11943624 None:intergenic 60.0%
!! GTGGGCAAGAGCGTTTGGAG+AGG + chr6_3:11943716-11943735 None:intergenic 60.0%
CGTTGAGCAGCTGGCAGCAA+TGG + chr6_3:11943791-11943810 None:intergenic 60.0%
GTCATCCGACTTAGGGAGGC+CGG + chr6_3:11943814-11943833 None:intergenic 60.0%
TATTCCACTCACCCGGCACG+TGG - chr6_3:11944083-11944102 Msa0939800:intron 60.0%
AAAACCACGTGCCGGGTGAG+TGG + chr6_3:11944090-11944109 None:intergenic 60.0%
AGTTGCCTGACCTCCCACGA+TGG + chr6_3:11944745-11944764 None:intergenic 60.0%
ACCTTGCAAGCACCTGGACC+AGG - chr6_3:11944999-11945018 Msa0939800:five_prime_UTR 60.0%
ACCTGGTCCAGGTGCTTGCA+AGG + chr6_3:11945003-11945022 None:intergenic 60.0%
GCTGGCCCGCATGTATAACC+TGG + chr6_3:11945020-11945039 None:intergenic 60.0%
GCTGCATGAACATGTCGGGC+AGG + chr6_3:11945752-11945771 None:intergenic 60.0%
GAGGCCAAATGCGGCACACT+TGG + chr6_3:11946048-11946067 None:intergenic 60.0%
CTCATGCAAGCCGGTCCTAC+TGG - chr6_3:11946767-11946786 Msa0939800:five_prime_UTR 60.0%
CCACATGCGCAGGAGGGACA+AGG + chr6_3:11932670-11932689 None:intergenic 65.0%
CCTTGTCCCTCCTGCGCATG+TGG - chr6_3:11932667-11932686 Msa0939800:intron 65.0%
TGGCAGCCACATGCGCAGGA+GGG + chr6_3:11932676-11932695 None:intergenic 65.0%
TTGGCAGCCACATGCGCAGG+AGG + chr6_3:11932677-11932696 None:intergenic 65.0%
GCCGCATGAACATGTCGGGC+AGG - chr6_3:11935553-11935572 Msa0939800:intron 65.0%
TTGGGGACTGGGGATGGCCA+TGG + chr6_3:11943110-11943129 Msa0939810:CDS 65.0%
AGCCACTTGGGGACTGGGGA+TGG + chr6_3:11943116-11943135 Msa0939810:CDS 65.0%
TGCTGCCAGCTGCTCAACGC+CGG - chr6_3:11943792-11943811 Msa0939800:intron 65.0%
CAACGCCGGCCTCCCTAAGT+CGG - chr6_3:11943806-11943825 Msa0939800:intron 65.0%
ATGGGCCATCGTGGGAGGTC+AGG - chr6_3:11944737-11944756 Msa0939800:intron 65.0%
!! CAAGTCAGCGTCGGTGGAGC+TGG - chr6_3:11944939-11944958 Msa0939800:five_prime_UTR 65.0%
AGAAGGCGACAGTCGCGGCC+TGG - chr6_3:11942937-11942956 Msa0939800:intron 70.0%
GACAGTCGCGGCCTGGCTGA+TGG - chr6_3:11942944-11942963 Msa0939800:intron 70.0%
GTCGCGGCCTGGCTGATGGA+CGG - chr6_3:11942948-11942967 Msa0939800:intron 70.0%
GGCCATCCCCAGTCCCCAAG+TGG - chr6_3:11943111-11943130 Msa0939800:intron 70.0%
GCGGAGCCACTTGGGGACTG+GGG + chr6_3:11943120-11943139 Msa0939810:CDS 70.0%
GGCGGAGCCACTTGGGGACT+GGG + chr6_3:11943121-11943140 Msa0939810:CDS 70.0%
TGGCGGAGCCACTTGGGGAC+TGG + chr6_3:11943122-11943141 Msa0939810:CDS 70.0%
! GCGGCCTGGCTGATGGACGG+AGG - chr6_3:11942951-11942970 Msa0939800:intron 75.0%
! GGAGGCCGGCGTTGAGCAGC+TGG + chr6_3:11943800-11943819 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 11930912 11946934 11930912 ID=Msa0939800;Name=Msa0939800
chr6_3 mRNA 11930912 11946934 11930912 ID=Msa0939800-mRNA-1;Parent=Msa0939800;Name=Msa0939800-mRNA-1;_AED=0.17;_eAED=0.17;_QI=1507|0.54|0.41|1|0.54|0.5|12|0|383
chr6_3 exon 11930912 11931123 11930912 ID=Msa0939800-mRNA-1:exon:3953;Parent=Msa0939800-mRNA-1
chr6_3 exon 11931543 11931751 11931543 ID=Msa0939800-mRNA-1:exon:3952;Parent=Msa0939800-mRNA-1
chr6_3 exon 11932037 11932196 11932037 ID=Msa0939800-mRNA-1:exon:3951;Parent=Msa0939800-mRNA-1
chr6_3 exon 11932745 11932934 11932745 ID=Msa0939800-mRNA-1:exon:3950;Parent=Msa0939800-mRNA-1
chr6_3 exon 11932953 11933201 11932953 ID=Msa0939800-mRNA-1:exon:3949;Parent=Msa0939800-mRNA-1
chr6_3 exon 11934899 11935024 11934899 ID=Msa0939800-mRNA-1:exon:3948;Parent=Msa0939800-mRNA-1
chr6_3 exon 11944112 11944436 11944112 ID=Msa0939800-mRNA-1:exon:3947;Parent=Msa0939800-mRNA-1
chr6_3 exon 11944759 11945036 11944759 ID=Msa0939800-mRNA-1:exon:3946;Parent=Msa0939800-mRNA-1
chr6_3 exon 11945130 11945277 11945130 ID=Msa0939800-mRNA-1:exon:3945;Parent=Msa0939800-mRNA-1
chr6_3 exon 11945637 11946093 11945637 ID=Msa0939800-mRNA-1:exon:3944;Parent=Msa0939800-mRNA-1
chr6_3 exon 11946532 11946611 11946532 ID=Msa0939800-mRNA-1:exon:3943;Parent=Msa0939800-mRNA-1
chr6_3 exon 11946710 11946934 11946710 ID=Msa0939800-mRNA-1:exon:3942;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11946710 11946934 11946710 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11946532 11946611 11946532 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11945637 11946093 11945637 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11945130 11945277 11945130 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11944759 11945036 11944759 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 five_prime_UTR 11944118 11944436 11944118 ID=Msa0939800-mRNA-1:five_prime_utr;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11944112 11944117 11944112 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11934899 11935024 11934899 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11932953 11933201 11932953 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11932745 11932934 11932745 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11932037 11932196 11932037 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11931543 11931751 11931543 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
chr6_3 CDS 11930912 11931123 11930912 ID=Msa0939800-mRNA-1:cds;Parent=Msa0939800-mRNA-1
Gene Sequence

>Msa0939800

ATGTTACTAGGGTTTGTGGGAGAGATGGAGACAAATGAAGAGGAATCAGAGATCAATACAGAGAGAAAAGAGAAGAAGACGAGTGAGATGAGTGTGGGTTTCGAGTTCGATGGAGAGTTAGAGAAGGCGACAGCTGTTGTTACAATGAACAACTTCCAACGTTATCGTCATATATCGGCACCTGGATGGTCATTAGGATGGAATTGGGCAAATAACGAGGTAATATGGGCCATCGTGGGAGGTCAGGCAACTGAACAAGGAGATTGTTCAAAATTTAAAGGAACCATCCCACATTGCTGTAAAAAACATCCAACGGTCGTAGATTTACTTCCTGGGACGCCTTATAATCAACAAATTGCAAATTGTTGCAAAGGCGGTGTTGATCCAATAAATGCAGTTTCAGCATTTCAAGTCAGCGTCGGTGGAGCTGGTACAACTAACAAAACTGTCAAACTGCCGAAAAATTTCACCTTGCAAGCACCTGGACCAGGTTATACATGCGGGCCAGCAAAAGTTGTGAAGCCTACTAAATACATAACACCAGACAAAAGGAGAGTAACTCAAGCACTTATGACATGGAATGTGAGATGCACGTATTCACAATTTTTAGCTCCGAAAACTCCAACTTGTTGCGTCGCTCTCTCATCATTCTATAATGATACTATCGTACCCTGCCCGACATGTTCATGCAGCTGCCAGGGCAACTCAGCTCAATCAGGAACCTGTATAGATACCACGCCTTTGGTTCAATGTACTAGTCATGTGTGTCCTATTCAAGTTCACTGGCACATTAATCTTAACGACAAGGAGTATTGGCGCGTAAAGGTCACTGTTACCAATTTCAACTACAGGACGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCAAACTTTTACAATCTGACTCAACTTTCCAGTTTCAACTACAAATCAATAAATGATGCAACAATGATTTGGGGAGTTAAATTCTACAAGGATTTACTCATGCAAGCCGGTCCTACTGGTAATGTACAGTTAGAGCTACTTTTCCGAAAGGATAAGAGTTTTACTTTCGATAAAGATTGGGCTTTTCCCCGGAGGATCTATTTCAATGGCGACAACTGTGTGATGCCACCAACTGATGCTTATCCATGGTTGCCTAATGAATGA
Protein sequence

>Msa0939800

MLLGFVGEMETNEEESEINTERKEKKTSEMSVGFEFDGELEKATAVVTMNNFQRYRHISAPGWSLGWNWANNEVIWAIVGGQATEQGDCSKFKGTIPHCCKKHPTVVDLLPGTPYNQQIANCCKGGVDPINAVSAFQVSVGGAGTTNKTVKLPKNFTLQAPGPGYTCGPAKVVKPTKYITPDKRRVTQALMTWNVRCTYSQFLAPKTPTCCVALSSFYNDTIVPCPTCSCSCQGNSAQSGTCIDTTPLVQCTSHVCPIQVHWHINLNDKEYWRVKVTVTNFNYRTNYSDWNLVVQHPNFYNLTQLSSFNYKSINDATMIWGVKFYKDLLMQAGPTGNVQLELLFRKDKSFTFDKDWAFPRRIYFNGDNCVMPPTDAYPWLPNE*