Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942800 | XP_013451409.1 | 94.146 | 410 | 19 | 1 | 1 | 410 | 1 | 405 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942800 | sp|Q9LI89|FBK70_ARATH | 50.267 | 374 | 171 | 5 | 46 | 410 | 55 | 422 | 1.13e-119 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942800 | A0A072U6S3 | 94.146 | 410 | 19 | 1 | 1 | 410 | 1 | 405 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0942800 | Msa1030320 | 0.808988 | 2.362186e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942800 | MtrunA17_Chr6g0459491 | 94.146 | 410 | 19 | 1 | 1 | 410 | 1 | 405 | 0.0 | 795 |
| Msa0942800 | MtrunA17_Chr7g0225551 | 60.723 | 415 | 140 | 7 | 5 | 409 | 1 | 402 | 2.22e-166 | 472 |
| Msa0942800 | MtrunA17_Chr2g0326541 | 39.216 | 306 | 174 | 3 | 62 | 367 | 21 | 314 | 7.14e-70 | 224 |
| Msa0942800 | MtrunA17_Chr4g0010131 | 39.093 | 353 | 188 | 7 | 65 | 408 | 75 | 409 | 2.81e-67 | 219 |
| Msa0942800 | MtrunA17_Chr4g0010161 | 35.787 | 394 | 225 | 9 | 27 | 408 | 35 | 412 | 2.24e-65 | 214 |
| Msa0942800 | MtrunA17_Chr4g0060541 | 38.509 | 322 | 178 | 4 | 55 | 367 | 25 | 335 | 4.71e-65 | 212 |
| Msa0942800 | MtrunA17_Chr8g0362081 | 37.569 | 362 | 192 | 8 | 63 | 408 | 152 | 495 | 1.21e-64 | 214 |
| Msa0942800 | MtrunA17_Chr5g0416461 | 35.917 | 387 | 211 | 9 | 41 | 408 | 106 | 474 | 4.50e-63 | 210 |
| Msa0942800 | MtrunA17_Chr4g0011151 | 36.745 | 381 | 211 | 10 | 41 | 408 | 83 | 446 | 6.72e-62 | 206 |
| Msa0942800 | MtrunA17_Chr4g0011161 | 36.842 | 380 | 212 | 10 | 41 | 408 | 83 | 446 | 7.31e-62 | 206 |
| Msa0942800 | MtrunA17_Chr4g0011171 | 36.579 | 380 | 213 | 10 | 41 | 408 | 83 | 446 | 4.23e-61 | 204 |
| Msa0942800 | MtrunA17_Chr4g0011221 | 36.842 | 380 | 212 | 10 | 41 | 408 | 83 | 446 | 6.80e-61 | 203 |
| Msa0942800 | MtrunA17_Chr4g0011191 | 36.515 | 241 | 140 | 4 | 41 | 280 | 83 | 311 | 8.09e-38 | 139 |
| Msa0942800 | MtrunA17_Chr3g0122681 | 26.154 | 325 | 191 | 12 | 62 | 367 | 36 | 330 | 1.67e-21 | 95.1 |
| Msa0942800 | MtrunA17_Chr8g0378511 | 24.668 | 377 | 235 | 15 | 62 | 408 | 78 | 435 | 1.05e-20 | 93.6 |
| Msa0942800 | MtrunA17_Chr2g0278921 | 24.538 | 379 | 207 | 13 | 62 | 370 | 44 | 413 | 1.83e-18 | 87.0 |
| Msa0942800 | MtrunA17_Chr8g0377241 | 25.077 | 323 | 201 | 11 | 60 | 367 | 50 | 346 | 6.95e-18 | 84.7 |
| Msa0942800 | MtrunA17_Chr4g0063531 | 24.211 | 285 | 192 | 9 | 62 | 339 | 68 | 335 | 8.07e-18 | 85.1 |
| Msa0942800 | MtrunA17_Chr2g0285851 | 23.209 | 349 | 239 | 9 | 36 | 372 | 27 | 358 | 1.26e-17 | 84.3 |
| Msa0942800 | MtrunA17_Chr2g0281551 | 32.222 | 180 | 95 | 6 | 174 | 340 | 111 | 276 | 2.95e-17 | 82.8 |
| Msa0942800 | MtrunA17_Chr3g0115401 | 23.056 | 373 | 217 | 9 | 62 | 370 | 44 | 410 | 2.72e-16 | 80.5 |
| Msa0942800 | MtrunA17_Chr7g0260051 | 23.270 | 318 | 197 | 8 | 65 | 367 | 8 | 293 | 2.08e-14 | 73.9 |
| Msa0942800 | MtrunA17_Chr4g0011201 | 35.780 | 109 | 58 | 4 | 307 | 408 | 18 | 121 | 8.32e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942800 | AT3G27150.2 | 50.267 | 374 | 171 | 5 | 46 | 410 | 55 | 422 | 1.15e-120 | 357 |
| Msa0942800 | AT3G27150.1 | 50.267 | 374 | 171 | 5 | 46 | 410 | 55 | 422 | 1.15e-120 | 357 |
| Msa0942800 | AT5G40680.1 | 45.355 | 366 | 184 | 4 | 52 | 410 | 59 | 415 | 4.22e-104 | 314 |
| Msa0942800 | AT1G26930.1 | 35.012 | 417 | 228 | 11 | 13 | 408 | 25 | 419 | 1.70e-68 | 223 |
| Msa0942800 | AT5G60570.2 | 36.412 | 379 | 203 | 7 | 49 | 408 | 32 | 391 | 1.32e-66 | 217 |
| Msa0942800 | AT5G60570.1 | 36.412 | 379 | 203 | 7 | 49 | 408 | 32 | 391 | 1.32e-66 | 217 |
| Msa0942800 | AT5G60570.3 | 36.412 | 379 | 203 | 7 | 49 | 408 | 32 | 391 | 1.32e-66 | 217 |
| Msa0942800 | AT1G14330.1 | 38.728 | 346 | 188 | 7 | 74 | 408 | 107 | 439 | 2.54e-65 | 215 |
| Msa0942800 | AT2G02870.2 | 40.264 | 303 | 161 | 5 | 74 | 367 | 130 | 421 | 1.95e-61 | 206 |
| Msa0942800 | AT2G02870.3 | 40.264 | 303 | 161 | 5 | 74 | 367 | 130 | 421 | 1.95e-61 | 206 |
| Msa0942800 | AT2G02870.1 | 40.264 | 303 | 161 | 5 | 74 | 367 | 130 | 421 | 1.95e-61 | 206 |
| Msa0942800 | AT1G74510.2 | 35.393 | 356 | 195 | 8 | 74 | 408 | 108 | 449 | 3.11e-59 | 199 |
| Msa0942800 | AT1G74510.1 | 35.393 | 356 | 195 | 8 | 74 | 408 | 108 | 449 | 3.11e-59 | 199 |
| Msa0942800 | AT1G74510.3 | 35.393 | 356 | 195 | 8 | 74 | 408 | 108 | 449 | 3.11e-59 | 199 |
| Msa0942800 | AT1G26930.2 | 29.496 | 417 | 199 | 13 | 13 | 408 | 25 | 367 | 4.20e-42 | 152 |
| Msa0942800 | AT1G55270.1 | 25.625 | 320 | 209 | 11 | 62 | 371 | 79 | 379 | 7.31e-22 | 97.4 |
| Msa0942800 | AT1G67480.3 | 23.364 | 321 | 205 | 12 | 62 | 367 | 40 | 334 | 1.02e-16 | 81.6 |
| Msa0942800 | AT1G67480.1 | 23.364 | 321 | 205 | 12 | 62 | 367 | 40 | 334 | 1.02e-16 | 81.6 |
| Msa0942800 | AT1G67480.2 | 23.364 | 321 | 205 | 12 | 62 | 367 | 40 | 334 | 1.02e-16 | 81.6 |
| Msa0942800 | AT1G16250.2 | 23.145 | 337 | 217 | 11 | 62 | 373 | 9 | 328 | 2.00e-15 | 77.8 |
| Msa0942800 | AT1G16250.1 | 23.145 | 337 | 217 | 11 | 62 | 373 | 9 | 328 | 2.00e-15 | 77.8 |
| Msa0942800 | AT3G63220.1 | 22.006 | 309 | 194 | 10 | 74 | 367 | 17 | 293 | 1.26e-14 | 75.1 |
| Msa0942800 | AT1G22040.1 | 22.701 | 348 | 198 | 10 | 62 | 345 | 44 | 384 | 1.32e-14 | 75.9 |
| Msa0942800 | AT3G63220.3 | 22.006 | 309 | 194 | 10 | 74 | 367 | 24 | 300 | 1.57e-14 | 74.7 |
| Msa0942800 | AT3G63220.2 | 22.006 | 309 | 194 | 10 | 74 | 367 | 24 | 300 | 1.57e-14 | 74.7 |
| Msa0942800 | AT1G55270.2 | 25.283 | 265 | 171 | 10 | 115 | 371 | 8 | 253 | 4.16e-14 | 73.2 |
| Msa0942800 | AT1G30090.1 | 22.671 | 322 | 220 | 10 | 62 | 371 | 54 | 358 | 7.61e-14 | 73.2 |
| Msa0942800 | AT1G27420.1 | 21.296 | 324 | 212 | 11 | 62 | 369 | 11 | 307 | 2.27e-11 | 65.1 |
Find 59 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCTGATTTGGAGGTTT+TGG | 0.183625 | 6_3:+18152908 | Msa0942800:CDS |
| GGCACACACTTATTTGTTTC+AGG | 0.232555 | 6_3:+18151480 | Msa0942800:CDS |
| TCTGATTACATATTTGAAAA+TGG | 0.250427 | 6_3:+18151435 | Msa0942800:CDS |
| TGGTGTGGCATTCAAATCTT+TGG | 0.269905 | 6_3:+18152830 | Msa0942800:CDS |
| ATGTAATCAGATGGAATAAT+AGG | 0.294095 | 6_3:-18151423 | None:intergenic |
| AGCAACTTGTGGAAGAAGTT+AGG | 0.306400 | 6_3:+18152771 | Msa0942800:CDS |
| CACCTTGGTGTTATCATTGA+TGG | 0.312688 | 6_3:-18152333 | None:intergenic |
| CAGCTGAATTTAAACATGTT+TGG | 0.335547 | 6_3:-18152443 | None:intergenic |
| TATAAGATAAGGAGAATGAT+AGG | 0.350352 | 6_3:+18151309 | Msa0942800:CDS |
| ACTTGGTTATCAGCTTTAAC+AGG | 0.376480 | 6_3:-18152801 | None:intergenic |
| CACTCCAAAACCTCCAAATC+AGG | 0.380079 | 6_3:-18152912 | None:intergenic |
| CAAAAGAGAAAATCATGTTC+AGG | 0.415168 | 6_3:+18152516 | Msa0942800:CDS |
| ACAATATCCTTCAACATGTT+AGG | 0.416158 | 6_3:-18152648 | None:intergenic |
| TTACCTAAGTGGAGTTTCAT+TGG | 0.417301 | 6_3:+18151036 | Msa0942800:CDS |
| ATCATGTTCAGGTTGTTACT+TGG | 0.417427 | 6_3:+18152527 | Msa0942800:CDS |
| GGTGTGGCATTCAAATCTTT+GGG | 0.418474 | 6_3:+18152831 | Msa0942800:CDS |
| GCTGATAACCAAGTTGGTTA+TGG | 0.419047 | 6_3:+18152810 | Msa0942800:CDS |
| AGTGACAATGGTTCCTCCTC+AGG | 0.422624 | 6_3:+18151129 | Msa0942800:CDS |
| AGATTGATGGAGCAGTTATA+TGG | 0.437994 | 6_3:+18152274 | Msa0942800:CDS |
| GCAACTTGTGGAAGAAGTTA+GGG | 0.447503 | 6_3:+18152772 | Msa0942800:CDS |
| TAAGTGTGTGCCTGCAGAAA+AGG | 0.451777 | 6_3:-18151469 | None:intergenic |
| TGAACTAGAGACAATGATAT+TGG | 0.469340 | 6_3:+18151206 | Msa0942800:CDS |
| AGGAATCAGATTCCATTTGT+TGG | 0.471068 | 6_3:-18152628 | None:intergenic |
| AGGAATTGGTGTGTGTTTGA+TGG | 0.471263 | 6_3:+18151375 | Msa0942800:CDS |
| TTGTTAACAACAGCTATAAG+AGG | 0.476907 | 6_3:-18152693 | None:intergenic |
| GGTTTCCAATTTCAAAACAC+TGG | 0.484943 | 6_3:+18151232 | Msa0942800:CDS |
| GTGGTGAAATCTATAAGATA+AGG | 0.491883 | 6_3:+18151298 | Msa0942800:CDS |
| AAGCAAATTGTGTGTGGTAG+TGG | 0.499948 | 6_3:+18152936 | Msa0942800:CDS |
| TCTGATTCCTAACATGTTGA+AGG | 0.502022 | 6_3:+18152641 | Msa0942800:CDS |
| GTTAAAGCTGATAACCAAGT+TGG | 0.502198 | 6_3:+18152804 | Msa0942800:CDS |
| AAGTGGAGTTTCATTGGCAG+TGG | 0.505384 | 6_3:+18151042 | Msa0942800:CDS |
| TTAACAGGTATGGAGATTGA+TGG | 0.505810 | 6_3:+18152261 | Msa0942800:intron |
| TCGACGAAAAGACCAACAAA+TGG | 0.506274 | 6_3:+18152616 | Msa0942800:CDS |
| GTAAAAGATCATTACCTAAG+TGG | 0.506885 | 6_3:+18151025 | Msa0942800:CDS |
| CAAGTGGTGGTGAAAGGAAT+TGG | 0.508700 | 6_3:+18151361 | Msa0942800:CDS |
| AGAACATAATCTGCATCCTT+CGG | 0.509496 | 6_3:-18151159 | None:intergenic |
| TGTTAACAAGTGGTGGTGAA+AGG | 0.515429 | 6_3:+18151355 | Msa0942800:CDS |
| ATGAACTAACAACAAATGAA+TGG | 0.521158 | 6_3:+18152301 | Msa0942800:CDS |
| ATGGTCAATTCAAGTCATGC+AGG | 0.532458 | 6_3:+18151394 | Msa0942800:CDS |
| ATGCCACACCATAACCAACT+TGG | 0.559711 | 6_3:-18152818 | None:intergenic |
| ACAACAAATGAATGGTTCAA+AGG | 0.565298 | 6_3:+18152309 | Msa0942800:CDS |
| CTTCGGTTCTTGACCTGAGG+AGG | 0.568044 | 6_3:-18151142 | None:intergenic |
| ATCCTTCGGTTCTTGACCTG+AGG | 0.570020 | 6_3:-18151145 | None:intergenic |
| ACTTGATGCTTCAACAAATG+AGG | 0.574620 | 6_3:+18152728 | Msa0942800:CDS |
| TTGTCACTTTCTAGTGACAA+TGG | 0.583290 | 6_3:+18151117 | Msa0942800:CDS |
| ATAAGATAAGGAGAATGATA+GGG | 0.583653 | 6_3:+18151310 | Msa0942800:CDS |
| AAAACCTCCAAATCAGGATG+AGG | 0.586084 | 6_3:-18152906 | None:intergenic |
| CTCCTCAGGTCAAGAACCGA+AGG | 0.589070 | 6_3:+18151143 | Msa0942800:CDS |
| CTGCCAATGAAACTCCACTT+AGG | 0.603962 | 6_3:-18151039 | None:intergenic |
| TCATCACTGAGACATGGTAA+TGG | 0.609444 | 6_3:-18151186 | None:intergenic |
| ATATGAAAGACAGCAACTTG+TGG | 0.612239 | 6_3:+18152760 | Msa0942800:CDS |
| AACGATAACGATCTAACATG+TGG | 0.619367 | 6_3:+18152585 | Msa0942800:CDS |
| TAGAGACAATGATATTGGCA+AGG | 0.621754 | 6_3:+18151211 | Msa0942800:CDS |
| ACAATTCCGAAAACCAAACA+TGG | 0.627306 | 6_3:+18152472 | Msa0942800:CDS |
| TCTAGTTCATCACTGAGACA+TGG | 0.668170 | 6_3:-18151192 | None:intergenic |
| TTAACAACAGCTATAAGAGG+TGG | 0.679581 | 6_3:-18152690 | None:intergenic |
| GAGTGGAAGCAAATTGTGTG+TGG | 0.695918 | 6_3:+18152930 | Msa0942800:CDS |
| GTCCATCAATGATAACACCA+AGG | 0.710921 | 6_3:+18152331 | Msa0942800:CDS |
| TAACCAAGTTGGTTATGGTG+TGG | 0.756562 | 6_3:+18152815 | Msa0942800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAATTCTCAAATTTTCAT+TGG | - | chr6_3:18151094-18151113 | None:intergenic | 20.0% |
| !!! | TTTTTAAATCTAATGAAGAG+TGG | + | chr6_3:18151279-18151298 | Msa0942800:CDS | 20.0% |
| !!! | TTTTCAAATATGTAATCAGA+TGG | - | chr6_3:18151435-18151454 | None:intergenic | 20.0% |
| !! | TCTGATTACATATTTGAAAA+TGG | + | chr6_3:18151435-18151454 | Msa0942800:CDS | 20.0% |
| !!! | TTTGTAATTTTGATAGATTC+AGG | + | chr6_3:18151736-18151755 | Msa0942800:intron | 20.0% |
| !!! | TTGTAATTTTGATAGATTCA+GGG | + | chr6_3:18151737-18151756 | Msa0942800:intron | 20.0% |
| !! | AATATAAGACACATTCATAT+GGG | - | chr6_3:18151870-18151889 | None:intergenic | 20.0% |
| !! | TAATATAAGACACATTCATA+TGG | - | chr6_3:18151871-18151890 | None:intergenic | 20.0% |
| !!! | TCTTTTTATTAGTGACTTTA+AGG | - | chr6_3:18152046-18152065 | None:intergenic | 20.0% |
| !! | TCTTTAACAAATCAATTAAC+AGG | + | chr6_3:18152246-18152265 | Msa0942800:intron | 20.0% |
| !!! | TAGAATTCTCAAATTTTCAT+TGG | - | chr6_3:18151094-18151113 | None:intergenic | 20.0% |
| !!! | TTTTTAAATCTAATGAAGAG+TGG | + | chr6_3:18151279-18151298 | Msa0942800:CDS | 20.0% |
| !!! | TTTTCAAATATGTAATCAGA+TGG | - | chr6_3:18151435-18151454 | None:intergenic | 20.0% |
| !! | TCTGATTACATATTTGAAAA+TGG | + | chr6_3:18151435-18151454 | Msa0942800:CDS | 20.0% |
| !!! | TTTGTAATTTTGATAGATTC+AGG | + | chr6_3:18151736-18151755 | Msa0942800:intron | 20.0% |
| !!! | TTGTAATTTTGATAGATTCA+GGG | + | chr6_3:18151737-18151756 | Msa0942800:intron | 20.0% |
| !! | AATATAAGACACATTCATAT+GGG | - | chr6_3:18151870-18151889 | None:intergenic | 20.0% |
| !! | TAATATAAGACACATTCATA+TGG | - | chr6_3:18151871-18151890 | None:intergenic | 20.0% |
| !!! | TCTTTTTATTAGTGACTTTA+AGG | - | chr6_3:18152046-18152065 | None:intergenic | 20.0% |
| !! | TCTTTAACAAATCAATTAAC+AGG | + | chr6_3:18152246-18152265 | Msa0942800:intron | 20.0% |
| !! | AAATTTTCATTGGAGGAATT+TGG | - | chr6_3:18151084-18151103 | None:intergenic | 25.0% |
| !! | AATTCTCAAATTTTCATTGG+AGG | - | chr6_3:18151091-18151110 | None:intergenic | 25.0% |
| !!! | ATTTTCCAGTGTTTTGAAAT+TGG | - | chr6_3:18151240-18151259 | None:intergenic | 25.0% |
| ! | TATAAGATAAGGAGAATGAT+AGG | + | chr6_3:18151309-18151328 | Msa0942800:CDS | 25.0% |
| ! | ATAAGATAAGGAGAATGATA+GGG | + | chr6_3:18151310-18151329 | Msa0942800:CDS | 25.0% |
| ! | CTTGTTAACATAAAAACTGA+TGG | - | chr6_3:18151345-18151364 | None:intergenic | 25.0% |
| !! | TCAGTTTTTATGTTAACAAG+TGG | + | chr6_3:18151345-18151364 | Msa0942800:CDS | 25.0% |
| ! | ATGTAATCAGATGGAATAAT+AGG | - | chr6_3:18151426-18151445 | None:intergenic | 25.0% |
| !!! | AGGTATGTATTTTGAGTAAT+TGG | + | chr6_3:18151500-18151519 | Msa0942800:intron | 25.0% |
| !! | GTTTCTTTTATTAGTCAGTT+TGG | + | chr6_3:18151601-18151620 | Msa0942800:intron | 25.0% |
| ! | AATAAAAGAAAGACAATACG+AGG | - | chr6_3:18151905-18151924 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTGTTAGTTTGTT+TGG | + | chr6_3:18151941-18151960 | Msa0942800:intron | 25.0% |
| ! | GATACTTATGAATGTTAGTT+TGG | + | chr6_3:18152064-18152083 | Msa0942800:intron | 25.0% |
| ! | GTCTACAAATTACTAATGAA+CGG | + | chr6_3:18152117-18152136 | Msa0942800:intron | 25.0% |
| !!! | CAGGATTTTTTTTTGGAATT+TGG | + | chr6_3:18152146-18152165 | Msa0942800:intron | 25.0% |
| !!! | TGTGTGAAAAAATGTCATTT+TGG | - | chr6_3:18152215-18152234 | None:intergenic | 25.0% |
| ! | AACAAATCAATTAACAGGTA+TGG | + | chr6_3:18152251-18152270 | Msa0942800:intron | 25.0% |
| ! | ATGAACTAACAACAAATGAA+TGG | + | chr6_3:18152301-18152320 | Msa0942800:CDS | 25.0% |
| !!! | GACAACAAGTTTTATGTAAT+CGG | + | chr6_3:18152549-18152568 | Msa0942800:CDS | 25.0% |
| !! | AAATTTTCATTGGAGGAATT+TGG | - | chr6_3:18151084-18151103 | None:intergenic | 25.0% |
| !! | AATTCTCAAATTTTCATTGG+AGG | - | chr6_3:18151091-18151110 | None:intergenic | 25.0% |
| !!! | ATTTTCCAGTGTTTTGAAAT+TGG | - | chr6_3:18151240-18151259 | None:intergenic | 25.0% |
| ! | TATAAGATAAGGAGAATGAT+AGG | + | chr6_3:18151309-18151328 | Msa0942800:CDS | 25.0% |
| ! | ATAAGATAAGGAGAATGATA+GGG | + | chr6_3:18151310-18151329 | Msa0942800:CDS | 25.0% |
| ! | CTTGTTAACATAAAAACTGA+TGG | - | chr6_3:18151345-18151364 | None:intergenic | 25.0% |
| !! | TCAGTTTTTATGTTAACAAG+TGG | + | chr6_3:18151345-18151364 | Msa0942800:CDS | 25.0% |
| ! | ATGTAATCAGATGGAATAAT+AGG | - | chr6_3:18151426-18151445 | None:intergenic | 25.0% |
| !!! | AGGTATGTATTTTGAGTAAT+TGG | + | chr6_3:18151500-18151519 | Msa0942800:intron | 25.0% |
| !! | GTTTCTTTTATTAGTCAGTT+TGG | + | chr6_3:18151601-18151620 | Msa0942800:intron | 25.0% |
| ! | AATAAAAGAAAGACAATACG+AGG | - | chr6_3:18151905-18151924 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTGTTAGTTTGTT+TGG | + | chr6_3:18151941-18151960 | Msa0942800:intron | 25.0% |
| ! | GATACTTATGAATGTTAGTT+TGG | + | chr6_3:18152064-18152083 | Msa0942800:intron | 25.0% |
| ! | GTCTACAAATTACTAATGAA+CGG | + | chr6_3:18152117-18152136 | Msa0942800:intron | 25.0% |
| !!! | CAGGATTTTTTTTTGGAATT+TGG | + | chr6_3:18152146-18152165 | Msa0942800:intron | 25.0% |
| !!! | TGTGTGAAAAAATGTCATTT+TGG | - | chr6_3:18152215-18152234 | None:intergenic | 25.0% |
| ! | AACAAATCAATTAACAGGTA+TGG | + | chr6_3:18152251-18152270 | Msa0942800:intron | 25.0% |
| ! | ATGAACTAACAACAAATGAA+TGG | + | chr6_3:18152301-18152320 | Msa0942800:CDS | 25.0% |
| !!! | GACAACAAGTTTTATGTAAT+CGG | + | chr6_3:18152549-18152568 | Msa0942800:CDS | 25.0% |
| GTAAAAGATCATTACCTAAG+TGG | + | chr6_3:18151025-18151044 | Msa0942800:CDS | 30.0% | |
| TGAACTAGAGACAATGATAT+TGG | + | chr6_3:18151206-18151225 | Msa0942800:CDS | 30.0% | |
| GTGGTGAAATCTATAAGATA+AGG | + | chr6_3:18151298-18151317 | Msa0942800:CDS | 30.0% | |
| ! | GTTTTTATGTTAACAAGTGG+TGG | + | chr6_3:18151348-18151367 | Msa0942800:CDS | 30.0% |
| ! | TCTTTACATGTGTCTTTTGT+CGG | + | chr6_3:18151624-18151643 | Msa0942800:intron | 30.0% |
| TGCATGGAAATACTAATAGA+AGG | + | chr6_3:18151692-18151711 | Msa0942800:intron | 30.0% | |
| TTCACTCATTCAAGAACTAA+TGG | - | chr6_3:18151804-18151823 | None:intergenic | 30.0% | |
| !! | CTTTTATTAGTTTGATCCTC+AGG | + | chr6_3:18151917-18151936 | Msa0942800:intron | 30.0% |
| !!! | ATTTTGGTCTTAAATGTGTG+AGG | - | chr6_3:18152199-18152218 | None:intergenic | 30.0% |
| ACAACAAATGAATGGTTCAA+AGG | + | chr6_3:18152309-18152328 | Msa0942800:CDS | 30.0% | |
| CAGCTGAATTTAAACATGTT+TGG | - | chr6_3:18152446-18152465 | None:intergenic | 30.0% | |
| !!! | TTTTTGCCATGTTTGGTTTT+CGG | - | chr6_3:18152481-18152500 | None:intergenic | 30.0% |
| !!! | TTCTCTTTTGGTTCATGTTT+GGG | - | chr6_3:18152506-18152525 | None:intergenic | 30.0% |
| !!! | TTTCTCTTTTGGTTCATGTT+TGG | - | chr6_3:18152507-18152526 | None:intergenic | 30.0% |
| ! | CTGAACATGATTTTCTCTTT+TGG | - | chr6_3:18152518-18152537 | None:intergenic | 30.0% |
| CAAAAGAGAAAATCATGTTC+AGG | + | chr6_3:18152516-18152535 | Msa0942800:CDS | 30.0% | |
| !! | AACAAGTTTTATGTAATCGG+AGG | + | chr6_3:18152552-18152571 | Msa0942800:CDS | 30.0% |
| ACAATATCCTTCAACATGTT+AGG | - | chr6_3:18152651-18152670 | None:intergenic | 30.0% | |
| TTGTTAACAACAGCTATAAG+AGG | - | chr6_3:18152696-18152715 | None:intergenic | 30.0% | |
| GTAAAAGATCATTACCTAAG+TGG | + | chr6_3:18151025-18151044 | Msa0942800:CDS | 30.0% | |
| TGAACTAGAGACAATGATAT+TGG | + | chr6_3:18151206-18151225 | Msa0942800:CDS | 30.0% | |
| GTGGTGAAATCTATAAGATA+AGG | + | chr6_3:18151298-18151317 | Msa0942800:CDS | 30.0% | |
| ! | GTTTTTATGTTAACAAGTGG+TGG | + | chr6_3:18151348-18151367 | Msa0942800:CDS | 30.0% |
| ! | TCTTTACATGTGTCTTTTGT+CGG | + | chr6_3:18151624-18151643 | Msa0942800:intron | 30.0% |
| TGCATGGAAATACTAATAGA+AGG | + | chr6_3:18151692-18151711 | Msa0942800:intron | 30.0% | |
| TTCACTCATTCAAGAACTAA+TGG | - | chr6_3:18151804-18151823 | None:intergenic | 30.0% | |
| !! | CTTTTATTAGTTTGATCCTC+AGG | + | chr6_3:18151917-18151936 | Msa0942800:intron | 30.0% |
| !!! | ATTTTGGTCTTAAATGTGTG+AGG | - | chr6_3:18152199-18152218 | None:intergenic | 30.0% |
| ACAACAAATGAATGGTTCAA+AGG | + | chr6_3:18152309-18152328 | Msa0942800:CDS | 30.0% | |
| CAGCTGAATTTAAACATGTT+TGG | - | chr6_3:18152446-18152465 | None:intergenic | 30.0% | |
| !!! | TTTTTGCCATGTTTGGTTTT+CGG | - | chr6_3:18152481-18152500 | None:intergenic | 30.0% |
| !!! | TTCTCTTTTGGTTCATGTTT+GGG | - | chr6_3:18152506-18152525 | None:intergenic | 30.0% |
| !!! | TTTCTCTTTTGGTTCATGTT+TGG | - | chr6_3:18152507-18152526 | None:intergenic | 30.0% |
| ! | CTGAACATGATTTTCTCTTT+TGG | - | chr6_3:18152518-18152537 | None:intergenic | 30.0% |
| CAAAAGAGAAAATCATGTTC+AGG | + | chr6_3:18152516-18152535 | Msa0942800:CDS | 30.0% | |
| !! | AACAAGTTTTATGTAATCGG+AGG | + | chr6_3:18152552-18152571 | Msa0942800:CDS | 30.0% |
| ACAATATCCTTCAACATGTT+AGG | - | chr6_3:18152651-18152670 | None:intergenic | 30.0% | |
| TTGTTAACAACAGCTATAAG+AGG | - | chr6_3:18152696-18152715 | None:intergenic | 30.0% | |
| TTACCTAAGTGGAGTTTCAT+TGG | + | chr6_3:18151036-18151055 | Msa0942800:CDS | 35.0% | |
| !! | TTGTCACTTTCTAGTGACAA+TGG | + | chr6_3:18151117-18151136 | Msa0942800:CDS | 35.0% |
| AGAACATAATCTGCATCCTT+CGG | - | chr6_3:18151162-18151181 | None:intergenic | 35.0% | |
| TAGAGACAATGATATTGGCA+AGG | + | chr6_3:18151211-18151230 | Msa0942800:CDS | 35.0% | |
| GGTTTCCAATTTCAAAACAC+TGG | + | chr6_3:18151232-18151251 | Msa0942800:CDS | 35.0% | |
| AGTCTTCATATGTCTTTCGT+TGG | + | chr6_3:18151654-18151673 | Msa0942800:intron | 35.0% | |
| TTCATATGTCTTTCGTTGGT+CGG | + | chr6_3:18151658-18151677 | Msa0942800:intron | 35.0% | |
| GACACAAACACACACATATA+GGG | + | chr6_3:18151768-18151787 | Msa0942800:intron | 35.0% | |
| ACTAACAAAAAACACACCTG+AGG | - | chr6_3:18151936-18151955 | None:intergenic | 35.0% | |
| ACTAAGGAAAGACACATTTC+AGG | - | chr6_3:18152014-18152033 | None:intergenic | 35.0% | |
| GAAATGTGTCTTTCCTTAGT+CGG | + | chr6_3:18152014-18152033 | Msa0942800:intron | 35.0% | |
| AACTAACAAACGCACATATG+AGG | - | chr6_3:18152091-18152110 | None:intergenic | 35.0% | |
| ! | TGTGCGTTTGTTAGTTAGTT+TGG | + | chr6_3:18152095-18152114 | Msa0942800:intron | 35.0% |
| TTGGAATTTGGATAGATTCG+AGG | + | chr6_3:18152158-18152177 | Msa0942800:intron | 35.0% | |
| TTAACAGGTATGGAGATTGA+TGG | + | chr6_3:18152261-18152280 | Msa0942800:intron | 35.0% | |
| AGATTGATGGAGCAGTTATA+TGG | + | chr6_3:18152274-18152293 | Msa0942800:CDS | 35.0% | |
| ! | GACAATTTTGCTTATGTTGC+TGG | + | chr6_3:18152378-18152397 | Msa0942800:CDS | 35.0% |
| ! | AATTTTGCTTATGTTGCTGG+TGG | + | chr6_3:18152381-18152400 | Msa0942800:CDS | 35.0% |
| ACAATTCCGAAAACCAAACA+TGG | + | chr6_3:18152472-18152491 | Msa0942800:CDS | 35.0% | |
| !! | ATCATGTTCAGGTTGTTACT+TGG | + | chr6_3:18152527-18152546 | Msa0942800:CDS | 35.0% |
| AACGATAACGATCTAACATG+TGG | + | chr6_3:18152585-18152604 | Msa0942800:CDS | 35.0% | |
| AGGAATCAGATTCCATTTGT+TGG | - | chr6_3:18152631-18152650 | None:intergenic | 35.0% | |
| TCTGATTCCTAACATGTTGA+AGG | + | chr6_3:18152641-18152660 | Msa0942800:CDS | 35.0% | |
| TTAACAACAGCTATAAGAGG+TGG | - | chr6_3:18152693-18152712 | None:intergenic | 35.0% | |
| ACTTGATGCTTCAACAAATG+AGG | + | chr6_3:18152728-18152747 | Msa0942800:CDS | 35.0% | |
| ATATGAAAGACAGCAACTTG+TGG | + | chr6_3:18152760-18152779 | Msa0942800:CDS | 35.0% | |
| ! | ACTTGGTTATCAGCTTTAAC+AGG | - | chr6_3:18152804-18152823 | None:intergenic | 35.0% |
| GTTAAAGCTGATAACCAAGT+TGG | + | chr6_3:18152804-18152823 | Msa0942800:CDS | 35.0% | |
| TTACCTAAGTGGAGTTTCAT+TGG | + | chr6_3:18151036-18151055 | Msa0942800:CDS | 35.0% | |
| !! | TTGTCACTTTCTAGTGACAA+TGG | + | chr6_3:18151117-18151136 | Msa0942800:CDS | 35.0% |
| AGAACATAATCTGCATCCTT+CGG | - | chr6_3:18151162-18151181 | None:intergenic | 35.0% | |
| TAGAGACAATGATATTGGCA+AGG | + | chr6_3:18151211-18151230 | Msa0942800:CDS | 35.0% | |
| GGTTTCCAATTTCAAAACAC+TGG | + | chr6_3:18151232-18151251 | Msa0942800:CDS | 35.0% | |
| AGTCTTCATATGTCTTTCGT+TGG | + | chr6_3:18151654-18151673 | Msa0942800:intron | 35.0% | |
| TTCATATGTCTTTCGTTGGT+CGG | + | chr6_3:18151658-18151677 | Msa0942800:intron | 35.0% | |
| GACACAAACACACACATATA+GGG | + | chr6_3:18151768-18151787 | Msa0942800:intron | 35.0% | |
| ACTAACAAAAAACACACCTG+AGG | - | chr6_3:18151936-18151955 | None:intergenic | 35.0% | |
| ACTAAGGAAAGACACATTTC+AGG | - | chr6_3:18152014-18152033 | None:intergenic | 35.0% | |
| GAAATGTGTCTTTCCTTAGT+CGG | + | chr6_3:18152014-18152033 | Msa0942800:intron | 35.0% | |
| AACTAACAAACGCACATATG+AGG | - | chr6_3:18152091-18152110 | None:intergenic | 35.0% | |
| ! | TGTGCGTTTGTTAGTTAGTT+TGG | + | chr6_3:18152095-18152114 | Msa0942800:intron | 35.0% |
| TTGGAATTTGGATAGATTCG+AGG | + | chr6_3:18152158-18152177 | Msa0942800:intron | 35.0% | |
| TTAACAGGTATGGAGATTGA+TGG | + | chr6_3:18152261-18152280 | Msa0942800:intron | 35.0% | |
| AGATTGATGGAGCAGTTATA+TGG | + | chr6_3:18152274-18152293 | Msa0942800:CDS | 35.0% | |
| ! | GACAATTTTGCTTATGTTGC+TGG | + | chr6_3:18152378-18152397 | Msa0942800:CDS | 35.0% |
| ! | AATTTTGCTTATGTTGCTGG+TGG | + | chr6_3:18152381-18152400 | Msa0942800:CDS | 35.0% |
| ACAATTCCGAAAACCAAACA+TGG | + | chr6_3:18152472-18152491 | Msa0942800:CDS | 35.0% | |
| !! | ATCATGTTCAGGTTGTTACT+TGG | + | chr6_3:18152527-18152546 | Msa0942800:CDS | 35.0% |
| AACGATAACGATCTAACATG+TGG | + | chr6_3:18152585-18152604 | Msa0942800:CDS | 35.0% | |
| AGGAATCAGATTCCATTTGT+TGG | - | chr6_3:18152631-18152650 | None:intergenic | 35.0% | |
| TCTGATTCCTAACATGTTGA+AGG | + | chr6_3:18152641-18152660 | Msa0942800:CDS | 35.0% | |
| TTAACAACAGCTATAAGAGG+TGG | - | chr6_3:18152693-18152712 | None:intergenic | 35.0% | |
| ACTTGATGCTTCAACAAATG+AGG | + | chr6_3:18152728-18152747 | Msa0942800:CDS | 35.0% | |
| ATATGAAAGACAGCAACTTG+TGG | + | chr6_3:18152760-18152779 | Msa0942800:CDS | 35.0% | |
| ! | ACTTGGTTATCAGCTTTAAC+AGG | - | chr6_3:18152804-18152823 | None:intergenic | 35.0% |
| GTTAAAGCTGATAACCAAGT+TGG | + | chr6_3:18152804-18152823 | Msa0942800:CDS | 35.0% | |
| TCATCACTGAGACATGGTAA+TGG | - | chr6_3:18151189-18151208 | None:intergenic | 40.0% | |
| ! | TCTAGTTCATCACTGAGACA+TGG | - | chr6_3:18151195-18151214 | None:intergenic | 40.0% |
| ! | TGTTAACAAGTGGTGGTGAA+AGG | + | chr6_3:18151355-18151374 | Msa0942800:CDS | 40.0% |
| AGGAATTGGTGTGTGTTTGA+TGG | + | chr6_3:18151375-18151394 | Msa0942800:CDS | 40.0% | |
| ATGGTCAATTCAAGTCATGC+AGG | + | chr6_3:18151394-18151413 | Msa0942800:CDS | 40.0% | |
| ! | GTTAAAGAGTCCTTTTCTGC+AGG | + | chr6_3:18151459-18151478 | Msa0942800:CDS | 40.0% |
| GGCACACACTTATTTGTTTC+AGG | + | chr6_3:18151480-18151499 | Msa0942800:CDS | 40.0% | |
| ! | GTCGGTTTATAGTCTATGCA+TGG | + | chr6_3:18151676-18151695 | Msa0942800:intron | 40.0% |
| CGACACAAACACACACATAT+AGG | + | chr6_3:18151767-18151786 | Msa0942800:intron | 40.0% | |
| TTTAAGGACCAAACCGACTA+AGG | - | chr6_3:18152030-18152049 | None:intergenic | 40.0% | |
| !!! | GCGCACTCAGGATTTTTTTT+TGG | + | chr6_3:18152139-18152158 | Msa0942800:intron | 40.0% |
| GATAGATTCGAGGACTATAG+TGG | + | chr6_3:18152168-18152187 | Msa0942800:intron | 40.0% | |
| !! | TTGGTCTTAAATGTGTGAGG+CGG | - | chr6_3:18152196-18152215 | None:intergenic | 40.0% |
| GTCCATCAATGATAACACCA+AGG | + | chr6_3:18152331-18152350 | Msa0942800:CDS | 40.0% | |
| !! | CACCTTGGTGTTATCATTGA+TGG | - | chr6_3:18152336-18152355 | None:intergenic | 40.0% |
| ! | TTGGGAGTTTTTGCCATGTT+TGG | - | chr6_3:18152488-18152507 | None:intergenic | 40.0% |
| TCGACGAAAAGACCAACAAA+TGG | + | chr6_3:18152616-18152635 | Msa0942800:CDS | 40.0% | |
| AGCAACTTGTGGAAGAAGTT+AGG | + | chr6_3:18152771-18152790 | Msa0942800:CDS | 40.0% | |
| GCAACTTGTGGAAGAAGTTA+GGG | + | chr6_3:18152772-18152791 | Msa0942800:CDS | 40.0% | |
| !! | GCTGATAACCAAGTTGGTTA+TGG | + | chr6_3:18152810-18152829 | Msa0942800:CDS | 40.0% |
| !! | TAACCAAGTTGGTTATGGTG+TGG | + | chr6_3:18152815-18152834 | Msa0942800:CDS | 40.0% |
| TGGTGTGGCATTCAAATCTT+TGG | + | chr6_3:18152830-18152849 | Msa0942800:CDS | 40.0% | |
| GGTGTGGCATTCAAATCTTT+GGG | + | chr6_3:18152831-18152850 | Msa0942800:CDS | 40.0% | |
| ! | GTGTTTTCCTCATCCTGATT+TGG | + | chr6_3:18152899-18152918 | Msa0942800:CDS | 40.0% |
| !!! | TTTTCCTCATCCTGATTTGG+AGG | + | chr6_3:18152902-18152921 | Msa0942800:CDS | 40.0% |
| AAAACCTCCAAATCAGGATG+AGG | - | chr6_3:18152909-18152928 | None:intergenic | 40.0% | |
| !!! | TCATCCTGATTTGGAGGTTT+TGG | + | chr6_3:18152908-18152927 | Msa0942800:CDS | 40.0% |
| AAGCAAATTGTGTGTGGTAG+TGG | + | chr6_3:18152936-18152955 | Msa0942800:CDS | 40.0% | |
| TCATCACTGAGACATGGTAA+TGG | - | chr6_3:18151189-18151208 | None:intergenic | 40.0% | |
| ! | TCTAGTTCATCACTGAGACA+TGG | - | chr6_3:18151195-18151214 | None:intergenic | 40.0% |
| ! | TGTTAACAAGTGGTGGTGAA+AGG | + | chr6_3:18151355-18151374 | Msa0942800:CDS | 40.0% |
| AGGAATTGGTGTGTGTTTGA+TGG | + | chr6_3:18151375-18151394 | Msa0942800:CDS | 40.0% | |
| ATGGTCAATTCAAGTCATGC+AGG | + | chr6_3:18151394-18151413 | Msa0942800:CDS | 40.0% | |
| ! | GTTAAAGAGTCCTTTTCTGC+AGG | + | chr6_3:18151459-18151478 | Msa0942800:CDS | 40.0% |
| GGCACACACTTATTTGTTTC+AGG | + | chr6_3:18151480-18151499 | Msa0942800:CDS | 40.0% | |
| ! | GTCGGTTTATAGTCTATGCA+TGG | + | chr6_3:18151676-18151695 | Msa0942800:intron | 40.0% |
| CGACACAAACACACACATAT+AGG | + | chr6_3:18151767-18151786 | Msa0942800:intron | 40.0% | |
| TTTAAGGACCAAACCGACTA+AGG | - | chr6_3:18152030-18152049 | None:intergenic | 40.0% | |
| !!! | GCGCACTCAGGATTTTTTTT+TGG | + | chr6_3:18152139-18152158 | Msa0942800:intron | 40.0% |
| GATAGATTCGAGGACTATAG+TGG | + | chr6_3:18152168-18152187 | Msa0942800:intron | 40.0% | |
| !! | TTGGTCTTAAATGTGTGAGG+CGG | - | chr6_3:18152196-18152215 | None:intergenic | 40.0% |
| GTCCATCAATGATAACACCA+AGG | + | chr6_3:18152331-18152350 | Msa0942800:CDS | 40.0% | |
| !! | CACCTTGGTGTTATCATTGA+TGG | - | chr6_3:18152336-18152355 | None:intergenic | 40.0% |
| ! | TTGGGAGTTTTTGCCATGTT+TGG | - | chr6_3:18152488-18152507 | None:intergenic | 40.0% |
| TCGACGAAAAGACCAACAAA+TGG | + | chr6_3:18152616-18152635 | Msa0942800:CDS | 40.0% | |
| AGCAACTTGTGGAAGAAGTT+AGG | + | chr6_3:18152771-18152790 | Msa0942800:CDS | 40.0% | |
| GCAACTTGTGGAAGAAGTTA+GGG | + | chr6_3:18152772-18152791 | Msa0942800:CDS | 40.0% | |
| !! | GCTGATAACCAAGTTGGTTA+TGG | + | chr6_3:18152810-18152829 | Msa0942800:CDS | 40.0% |
| !! | TAACCAAGTTGGTTATGGTG+TGG | + | chr6_3:18152815-18152834 | Msa0942800:CDS | 40.0% |
| TGGTGTGGCATTCAAATCTT+TGG | + | chr6_3:18152830-18152849 | Msa0942800:CDS | 40.0% | |
| GGTGTGGCATTCAAATCTTT+GGG | + | chr6_3:18152831-18152850 | Msa0942800:CDS | 40.0% | |
| ! | GTGTTTTCCTCATCCTGATT+TGG | + | chr6_3:18152899-18152918 | Msa0942800:CDS | 40.0% |
| !!! | TTTTCCTCATCCTGATTTGG+AGG | + | chr6_3:18152902-18152921 | Msa0942800:CDS | 40.0% |
| AAAACCTCCAAATCAGGATG+AGG | - | chr6_3:18152909-18152928 | None:intergenic | 40.0% | |
| !!! | TCATCCTGATTTGGAGGTTT+TGG | + | chr6_3:18152908-18152927 | Msa0942800:CDS | 40.0% |
| AAGCAAATTGTGTGTGGTAG+TGG | + | chr6_3:18152936-18152955 | Msa0942800:CDS | 40.0% | |
| CTGCCAATGAAACTCCACTT+AGG | - | chr6_3:18151042-18151061 | None:intergenic | 45.0% | |
| AAGTGGAGTTTCATTGGCAG+TGG | + | chr6_3:18151042-18151061 | Msa0942800:CDS | 45.0% | |
| ! | CAAGTGGTGGTGAAAGGAAT+TGG | + | chr6_3:18151361-18151380 | Msa0942800:CDS | 45.0% |
| TAAGTGTGTGCCTGCAGAAA+AGG | - | chr6_3:18151472-18151491 | None:intergenic | 45.0% | |
| TTGTCGTTGTATGCGTGAAG+CGG | + | chr6_3:18151529-18151548 | Msa0942800:intron | 45.0% | |
| GTGTCTTTCCTTAGTCGGTT+TGG | + | chr6_3:18152019-18152038 | Msa0942800:intron | 45.0% | |
| ! | GCTTTTGCAAAGACACACCT+TGG | - | chr6_3:18152351-18152370 | None:intergenic | 45.0% |
| ATGCCACACCATAACCAACT+TGG | - | chr6_3:18152821-18152840 | None:intergenic | 45.0% | |
| CACTCCAAAACCTCCAAATC+AGG | - | chr6_3:18152915-18152934 | None:intergenic | 45.0% | |
| !!! | CTGATTTGGAGGTTTTGGAG+TGG | + | chr6_3:18152913-18152932 | Msa0942800:CDS | 45.0% |
| GAGTGGAAGCAAATTGTGTG+TGG | + | chr6_3:18152930-18152949 | Msa0942800:CDS | 45.0% | |
| CTGCCAATGAAACTCCACTT+AGG | - | chr6_3:18151042-18151061 | None:intergenic | 45.0% | |
| AAGTGGAGTTTCATTGGCAG+TGG | + | chr6_3:18151042-18151061 | Msa0942800:CDS | 45.0% | |
| ! | CAAGTGGTGGTGAAAGGAAT+TGG | + | chr6_3:18151361-18151380 | Msa0942800:CDS | 45.0% |
| TAAGTGTGTGCCTGCAGAAA+AGG | - | chr6_3:18151472-18151491 | None:intergenic | 45.0% | |
| TTGTCGTTGTATGCGTGAAG+CGG | + | chr6_3:18151529-18151548 | Msa0942800:intron | 45.0% | |
| GTGTCTTTCCTTAGTCGGTT+TGG | + | chr6_3:18152019-18152038 | Msa0942800:intron | 45.0% | |
| ! | GCTTTTGCAAAGACACACCT+TGG | - | chr6_3:18152351-18152370 | None:intergenic | 45.0% |
| ATGCCACACCATAACCAACT+TGG | - | chr6_3:18152821-18152840 | None:intergenic | 45.0% | |
| CACTCCAAAACCTCCAAATC+AGG | - | chr6_3:18152915-18152934 | None:intergenic | 45.0% | |
| !!! | CTGATTTGGAGGTTTTGGAG+TGG | + | chr6_3:18152913-18152932 | Msa0942800:CDS | 45.0% |
| GAGTGGAAGCAAATTGTGTG+TGG | + | chr6_3:18152930-18152949 | Msa0942800:CDS | 45.0% | |
| AGTGACAATGGTTCCTCCTC+AGG | + | chr6_3:18151129-18151148 | Msa0942800:CDS | 50.0% | |
| ATCCTTCGGTTCTTGACCTG+AGG | - | chr6_3:18151148-18151167 | None:intergenic | 50.0% | |
| TACTAATGAACGGCGCACTC+AGG | + | chr6_3:18152127-18152146 | Msa0942800:intron | 50.0% | |
| AGTGACAATGGTTCCTCCTC+AGG | + | chr6_3:18151129-18151148 | Msa0942800:CDS | 50.0% | |
| ATCCTTCGGTTCTTGACCTG+AGG | - | chr6_3:18151148-18151167 | None:intergenic | 50.0% | |
| TACTAATGAACGGCGCACTC+AGG | + | chr6_3:18152127-18152146 | Msa0942800:intron | 50.0% | |
| CTTCGGTTCTTGACCTGAGG+AGG | - | chr6_3:18151145-18151164 | None:intergenic | 55.0% | |
| CTCCTCAGGTCAAGAACCGA+AGG | + | chr6_3:18151143-18151162 | Msa0942800:CDS | 55.0% | |
| CTTCGGTTCTTGACCTGAGG+AGG | - | chr6_3:18151145-18151164 | None:intergenic | 55.0% | |
| CTCCTCAGGTCAAGAACCGA+AGG | + | chr6_3:18151143-18151162 | Msa0942800:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 18151006 | 18153004 | 18151006 | ID=Msa0942800;Name=Msa0942800 |
| chr6_3 | mRNA | 18151006 | 18153004 | 18151006 | ID=Msa0942800-mRNA-1;Parent=Msa0942800;Name=Msa0942800-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|1|0|1|1|1|2|0|410 |
| chr6_3 | exon | 18151006 | 18151501 | 18151006 | ID=Msa0942800-mRNA-1:exon:5405;Parent=Msa0942800-mRNA-1 |
| chr6_3 | exon | 18152268 | 18153004 | 18152268 | ID=Msa0942800-mRNA-1:exon:5406;Parent=Msa0942800-mRNA-1 |
| chr6_3 | CDS | 18151006 | 18151501 | 18151006 | ID=Msa0942800-mRNA-1:cds;Parent=Msa0942800-mRNA-1 |
| chr6_3 | CDS | 18152268 | 18153004 | 18152268 | ID=Msa0942800-mRNA-1:cds;Parent=Msa0942800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
