AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0945700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945700 MtrunA17_Chr4g0072471 96.096 333 11 1 1 331 1 333 0.0 664
Msa0945700 MtrunA17_Chr1g0152781 57.746 142 58 2 3 143 1 141 1.40e-41 147
Msa0945700 MtrunA17_Chr3g0134601 47.857 140 70 2 3 139 1 140 1.31e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945700 AT4G30240.1 46.497 314 126 8 1 309 1 277 1.21e-78 243
Msa0945700 AT2G18860.1 42.173 313 137 9 1 310 1 272 6.64e-73 228
Msa0945700 AT2G18860.3 43.902 287 127 8 1 284 1 256 6.50e-71 221
Msa0945700 AT2G18860.2 38.596 285 131 9 29 310 10 253 6.67e-55 181
Msa0945700 AT1G27700.1 47.619 147 77 0 3 149 1 147 1.42e-38 139

Find 149 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTCAACCTGGGAAATT+TGG 0.091839 6_3:-24602023 None:intergenic
ACCCCTTCGGTGGGTAAATT+TGG 0.141444 6_3:+24602080 Msa0945700:CDS
GGCAAATAGATTAATCATTT+TGG 0.144921 6_3:+24603349 Msa0945700:three_prime_UTR
GGTTTGGATCCTTTCTCTTT+AGG 0.148009 6_3:-24602516 None:intergenic
GTTTGGATCCTTTCTCTTTA+GGG 0.201441 6_3:-24602515 None:intergenic
AGAAATAAGTTCTAATGTTT+TGG 0.209646 6_3:-24603538 None:intergenic
ATTTGGACATTATGCATAAA+AGG 0.213920 6_3:-24603130 None:intergenic
TTTATCTGCACCTGTTCTTA+TGG 0.221241 6_3:+24603219 Msa0945700:three_prime_UTR
ATTTGAAGGCAATAAATAAA+TGG 0.233198 6_3:+24604185 Msa0945700:three_prime_UTR
ATTCTTAAAGCAGCATAATT+AGG 0.246141 6_3:-24602435 None:intergenic
GAATGAAGAGCTTCTACTTT+TGG 0.248886 6_3:-24603825 None:intergenic
TTTAAAACAGTTGGAAGAAT+TGG 0.261799 6_3:+24601915 Msa0945700:intron
GTATGTCTACTTTAGTTTCC+TGG 0.263129 6_3:+24604480 Msa0945700:three_prime_UTR
CTCTGCAGCCGAGGAGGTTC+AGG 0.266450 6_3:+24601115 Msa0945700:CDS
TATCAAAATTATAGTCCTTA+TGG 0.275043 6_3:+24603030 Msa0945700:three_prime_UTR
AGTAGTTGCTTATGTGTATA+TGG 0.286226 6_3:-24600953 None:intergenic
TATGAAAACCCAACCGAAAA+AGG 0.287188 6_3:+24600802 None:intergenic
AGGGAGCTTCAAACTGCTTT+AGG 0.292513 6_3:+24601727 Msa0945700:CDS
AACAGGTGCAGATAAAATAT+TGG 0.308339 6_3:-24603212 None:intergenic
CAGCCTCAAAAGTCAAGATT+TGG 0.310137 6_3:-24603851 None:intergenic
TGTCACATTCTTGTATTTAG+TGG 0.320781 6_3:+24604342 Msa0945700:three_prime_UTR
CTGCTTTAGGTACTGCTAAA+TGG 0.321915 6_3:+24601740 Msa0945700:CDS
GCAACTGGCAAGAATGTTTA+TGG 0.324178 6_3:+24603652 Msa0945700:three_prime_UTR
AACAATCCATCTGAGGAAAA+AGG 0.326037 6_3:-24603743 None:intergenic
TAGCTAATAGTTTCGATCTA+TGG 0.328698 6_3:+24601075 Msa0945700:CDS
AATATCCGAGTAACTAGTTT+TGG 0.330825 6_3:+24603007 Msa0945700:three_prime_UTR
AAGGATCCAAACCTCTCTTC+TGG 0.337912 6_3:+24602526 Msa0945700:CDS
CATAATTCATTTAATTCCTC+TGG 0.338945 6_3:-24601703 None:intergenic
TGTAGAAAACTTAAATAAAC+TGG 0.344067 6_3:+24604127 Msa0945700:three_prime_UTR
GCATGCTGCCAATCATGTTT+TGG 0.352029 6_3:+24603328 Msa0945700:three_prime_UTR
TTCTGATGGTGATTGATAAA+AGG 0.355613 6_3:+24604250 Msa0945700:three_prime_UTR
ACAGGTGCAGATAAAATATT+GGG 0.357168 6_3:-24603211 None:intergenic
CAGGGCTCTCCTTGTTCTGA+TGG 0.360335 6_3:+24604236 Msa0945700:three_prime_UTR
CAAGCGCATATTGATACATA+TGG 0.362466 6_3:-24602919 None:intergenic
TATGTCTACTTTAGTTTCCT+GGG 0.375486 6_3:+24604481 Msa0945700:three_prime_UTR
TACAAGAATGTGACACTGAT+TGG 0.378744 6_3:-24604334 None:intergenic
CTTTCTAAAACGATGGGAAT+AGG 0.389734 6_3:+24604451 Msa0945700:three_prime_UTR
TCTATTTGCCAAAACATGAT+TGG 0.402675 6_3:-24603336 None:intergenic
CTTTGACGAAAACCTCAATT+CGG 0.406561 6_3:+24602193 Msa0945700:CDS
GATTGTTGTGGACTGTGGTT+TGG 0.415889 6_3:+24603759 Msa0945700:three_prime_UTR
CTGGGAAATTTGGCTTTCAA+TGG 0.416711 6_3:-24602013 None:intergenic
AGCTGTTCATATGTTCAATC+AGG 0.418102 6_3:+24602584 Msa0945700:CDS
TTTAGAAAGGTGGTTGGTAA+TGG 0.423278 6_3:-24604437 None:intergenic
AATCTGAAAATTGTGGCAAC+TGG 0.430669 6_3:+24603637 Msa0945700:three_prime_UTR
GTGATTGATAAAAGGTCAAA+TGG 0.433619 6_3:+24604258 Msa0945700:three_prime_UTR
ATGTATATACACTTAATAAC+AGG 0.433955 6_3:-24604504 None:intergenic
AGGAATTAAATGAATTATGC+AGG 0.439104 6_3:+24601707 Msa0945700:CDS
TTGTTTCCAGAAGAGAGGTT+TGG 0.440197 6_3:-24602532 None:intergenic
TTTATTCAACTTGAGCTAAA+CGG 0.442824 6_3:+24603484 Msa0945700:three_prime_UTR
CCTAAAAGATTCTTAACAGC+TGG 0.444932 6_3:+24602891 Msa0945700:exon
CCCTCAGATCTGCTTCAACC+TGG 0.446112 6_3:-24602032 None:intergenic
ACTCCATGTCTTCCTTGTAC+TGG 0.447202 6_3:-24602406 None:intergenic
CTTCACTCAATCAGTTAAAG+AGG 0.454000 6_3:+24603510 Msa0945700:three_prime_UTR
TGGTTTCGCATTATAGAGAA+AGG 0.454957 6_3:+24600830 Msa0945700:five_prime_UTR
CACTATACTACTATTTGCAT+TGG 0.455487 6_3:+24607388 Msa0945700:three_prime_UTR
TTGCCTTCAAATAAAAGTCT+AGG 0.455978 6_3:-24604174 None:intergenic
CAACCACCTTTCTAAAACGA+TGG 0.464405 6_3:+24604444 Msa0945700:three_prime_UTR
GGATGGTTCTACTAATGAAA+AGG 0.465309 6_3:+24602272 Msa0945700:CDS
CAATGCAAATAGTAGTATAG+TGG 0.469515 6_3:-24607387 Msa0945710:intron
GGTTTGCGTTTGCATGATTG+AGG 0.471481 6_3:+24603266 Msa0945700:three_prime_UTR
GCTTAAACGTTTCTTTCTGA+AGG 0.475819 6_3:+24600857 Msa0945700:five_prime_UTR
GCAGAATGGAATCAGCATAC+AGG 0.478824 6_3:+24601647 Msa0945700:intron
CTTGCTCACCAAATTTCAAA+AGG 0.480164 6_3:-24603090 None:intergenic
CATTGAAAGCCAAATTTCCC+AGG 0.483766 6_3:+24602014 Msa0945700:CDS
AACTTGTTTCTCCCGAATTG+AGG 0.485538 6_3:-24602205 None:intergenic
AGTGCTTTGCACAGTCTCAC+AGG 0.489966 6_3:-24602145 None:intergenic
TTTGATATATCTGCCTGTGC+TGG 0.492583 6_3:+24604284 Msa0945700:three_prime_UTR
TTTGACGAAAACCTCAATTC+GGG 0.493300 6_3:+24602194 Msa0945700:CDS
GGGCTAAGCTACCGACATCT+TGG 0.493305 6_3:+24601949 Msa0945700:CDS
GTTTGCGTTTGCATGATTGA+GGG 0.494398 6_3:+24603267 Msa0945700:three_prime_UTR
ATGTCCAAATTACAAAATAG+AGG 0.498871 6_3:+24603143 Msa0945700:three_prime_UTR
GGTTAAGAGAGAAGAGAGAA+AGG 0.498990 6_3:+24601674 Msa0945700:CDS
TAGCTACCAACATCTTCAAA+AGG 0.500447 6_3:-24601058 None:intergenic
TTACATAGAGGGCCGAAGCC+CGG 0.512814 6_3:+24603574 Msa0945700:three_prime_UTR
CCTCAGATCTGCTTCAACCT+GGG 0.523429 6_3:-24602031 None:intergenic
TTTGGATCCTTTCTCTTTAG+GGG 0.524248 6_3:-24602514 None:intergenic
CAGATACAACAACCAGTACA+AGG 0.524875 6_3:+24602394 Msa0945700:CDS
AAAGCAAAAGAAGAAGAAGA+AGG 0.526366 6_3:-24600896 None:intergenic
TACTAATGAAAAGGCTTCTG+TGG 0.526782 6_3:+24602281 Msa0945700:CDS
GATCTCGCCTCCATAAGAAC+AGG 0.527477 6_3:-24603229 None:intergenic
TTTCCTCAGATGGATTGTTG+TGG 0.531807 6_3:+24603747 Msa0945700:three_prime_UTR
CAGAATGGAATCAGCATACA+GGG 0.532786 6_3:+24601648 Msa0945700:intron
ATCTGCACCTGTTCTTATGG+AGG 0.537427 6_3:+24603222 Msa0945700:three_prime_UTR
AATTGCTGATGAAGATGAGC+AGG 0.537668 6_3:+24602461 Msa0945700:CDS
TAAAATAAATCTGAAAATTG+TGG 0.538580 6_3:+24603630 Msa0945700:three_prime_UTR
ATAAAAGGAACATGAACAAG+AGG 0.538627 6_3:-24603115 None:intergenic
GTTGGTAATGGTTATGATGT+CGG 0.540095 6_3:-24604425 None:intergenic
CAAGTTGAATAAAATACAAA+GGG 0.540723 6_3:-24603474 None:intergenic
TACAGTAATTAAGAAAGCAA+AGG 0.546771 6_3:-24603405 None:intergenic
GATGCCACCCCTAAAGAGAA+AGG 0.547656 6_3:+24602507 Msa0945700:CDS
AACCACCTTTCTAAAACGAT+GGG 0.547972 6_3:+24604445 Msa0945700:three_prime_UTR
CGTCCAAATTTACCCACCGA+AGG 0.553026 6_3:-24602083 None:intergenic
GGTTTCGCATTATAGAGAAA+GGG 0.554237 6_3:+24600831 Msa0945700:five_prime_UTR
GGATCCTTTCTCTTTAGGGG+TGG 0.554541 6_3:-24602511 None:intergenic
CGGCCATGTCGCAGATGCAA+AGG 0.556344 6_3:-24602800 None:intergenic
TGATTGATAAAAGGTCAAAT+GGG 0.556752 6_3:+24604259 Msa0945700:three_prime_UTR
ACTGCCTGTGCCTAGTGGCT+CGG 0.558413 6_3:-24601981 None:intergenic
AAGCGCATATTGATACATAT+GGG 0.559413 6_3:-24602918 None:intergenic
GTCCAAATTTACCCACCGAA+GGG 0.561850 6_3:-24602082 None:intergenic
CCCAGGTTGAAGCAGATCTG+AGG 0.562799 6_3:+24602031 Msa0945700:CDS
TAAAACGATGGGAATAGGAT+AGG 0.564897 6_3:+24604456 Msa0945700:three_prime_UTR
TGCTTTCTTCTCTGCAGCCG+AGG 0.565270 6_3:+24601106 Msa0945700:CDS
CAACCAGTACAAGGAAGACA+TGG 0.568883 6_3:+24602403 Msa0945700:CDS
GAACATATGAACAGCTCGCA+TGG 0.569231 6_3:-24602577 None:intergenic
TGATACCAAAACTAGTTACT+CGG 0.569769 6_3:-24603012 None:intergenic
AAAATTCGAAGAATATCCTC+AGG 0.572168 6_3:+24602554 Msa0945700:CDS
TGGAATCAGCATACAGGGCA+TGG 0.573816 6_3:+24601653 Msa0945700:CDS
GCTTCCACACGCTACACATG+TGG 0.574609 6_3:-24604403 None:intergenic
AGCGGATTCCTGAACCTCCT+CGG 0.575345 6_3:-24601123 None:intergenic
TCAAGTTGAATAAAATACAA+AGG 0.575497 6_3:-24603475 None:intergenic
ATGGTAAGCAACCCCTTCGG+TGG 0.578081 6_3:+24602070 Msa0945700:CDS
AGATGGATTGTTGTGGACTG+TGG 0.580209 6_3:+24603754 Msa0945700:three_prime_UTR
TTTAGGTACTGCTAAATGGC+AGG 0.580772 6_3:+24601744 Msa0945700:CDS
CCAGGTTGAAGCAGATCTGA+GGG 0.583115 6_3:+24602032 Msa0945700:CDS
ACAAAGGGTACTACATACAA+TGG 0.583449 6_3:-24603459 None:intergenic
TCTGAGGGAATCTAATATTG+AGG 0.588403 6_3:+24602047 Msa0945700:CDS
ATACACTTAATAACAGGCCC+AGG 0.589040 6_3:-24604498 None:intergenic
AAGGACTTCGAAGCTGTCGT+TGG 0.589216 6_3:-24602781 None:intergenic
TCCAAATTTACCCACCGAAG+GGG 0.591063 6_3:-24602081 None:intergenic
AGTCCTTTGCATCTGCGACA+TGG 0.591902 6_3:+24602797 Msa0945700:CDS
GAATATGATTCCAAGATCAA+AGG 0.593499 6_3:-24601009 None:intergenic
AGGATGGTAAGCAACCCCTT+CGG 0.597987 6_3:+24602067 Msa0945700:CDS
GAGAGAAAGGTCAAATCCAG+AGG 0.600395 6_3:+24601687 Msa0945700:CDS
AAAGCAGCATAATTAGGTGG+AGG 0.600780 6_3:-24602429 None:intergenic
CTTAAAGCAGCATAATTAGG+TGG 0.600870 6_3:-24602432 None:intergenic
TTTCTTCTCTGCAGCCGAGG+AGG 0.602704 6_3:+24601109 Msa0945700:CDS
AGGGAATCTAATATTGAGGA+TGG 0.604419 6_3:+24602051 Msa0945700:CDS
GGAATTAAATGAATTATGCA+GGG 0.607214 6_3:+24601708 Msa0945700:CDS
CAAGTGTAACTTTAAGAGAA+CGG 0.609448 6_3:-24602820 None:intergenic
TATCAATCACCATCAGAACA+AGG 0.611408 6_3:-24604245 None:intergenic
ACAACCGAGCCACTAGGCAC+AGG 0.616247 6_3:+24601977 Msa0945700:CDS
ATATATCTTCTCTTACAACA+TGG 0.620980 6_3:+24603940 Msa0945700:three_prime_UTR
GTGATGACAACCGAGCCACT+AGG 0.626268 6_3:+24601971 Msa0945700:CDS
TGGTAAGCAACCCCTTCGGT+GGG 0.635728 6_3:+24602071 Msa0945700:CDS
TGAACAGCTCGCATGGCCTG+AGG 0.640699 6_3:-24602570 None:intergenic
CTTCCACACGCTACACATGT+GGG 0.644922 6_3:-24604402 None:intergenic
GGTTGTCATCACCAAGATGT+CGG 0.646425 6_3:-24601960 None:intergenic
CATTAGTAGAACCATCCCAA+CGG 0.651159 6_3:-24602266 None:intergenic
TATAAACTGCCTGTGCCTAG+TGG 0.651749 6_3:-24601986 None:intergenic
ACTCCCACATGTGTAGCGTG+TGG 0.653140 6_3:+24604399 Msa0945700:three_prime_UTR
TAAAAGGAACATGAACAAGA+GGG 0.662513 6_3:-24603114 None:intergenic
GTGTTGTAAGACTTTCTGCA+CGG 0.665861 6_3:-24603180 None:intergenic
AAGCACTAAAGATGAATGTG+TGG 0.673162 6_3:+24602161 Msa0945700:CDS
ATGTGTATGAATGAATGTTG+TGG 0.676108 6_3:+24604208 Msa0945700:three_prime_UTR
AGGTGCAGATAAAATATTGG+GGG 0.688031 6_3:-24603209 None:intergenic
AGAGGAAGCGTACATATCAG+CGG 0.688848 6_3:-24601141 None:intergenic
AGTCCACAACAATCCATCTG+AGG 0.690122 6_3:-24603750 None:intergenic
CAGGTGCAGATAAAATATTG+GGG 0.717107 6_3:-24603210 None:intergenic
ATTGCTGATGAAGATGAGCA+GGG 0.719730 6_3:+24602462 Msa0945700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTTTAATTATGTTTAT+AGG + chr6_3:24601441-24601460 Msa0945700:intron 10.0%
!!! TATTTTTTTTTATTACATAG+AGG + chr6_3:24603562-24603581 Msa0945700:three_prime_UTR 10.0%
!!! ATTTTTTTTTATTACATAGA+GGG + chr6_3:24603563-24603582 Msa0945700:three_prime_UTR 10.0%
!!! ATTTTGATATTTATGTAATT+AGG - chr6_3:24605346-24605365 None:intergenic 10.0%
!! TAATTACATAAATATCAAAA+TGG + chr6_3:24605345-24605364 Msa0945700:intron 10.0%
!! ACTTAATTCATTTAATGAAT+AGG - chr6_3:24601589-24601608 None:intergenic 15.0%
!! TAAAATAAATCTGAAAATTG+TGG + chr6_3:24603630-24603649 Msa0945700:three_prime_UTR 15.0%
!!! TGGTTGTTTATTATTTTTTA+AGG + chr6_3:24603960-24603979 Msa0945700:three_prime_UTR 15.0%
!!! GGTTGTTTATTATTTTTTAA+GGG + chr6_3:24603961-24603980 Msa0945700:three_prime_UTR 15.0%
!!! TGTTTTGATATTATATATCT+AGG + chr6_3:24604103-24604122 Msa0945700:three_prime_UTR 15.0%
!!! AACTTTTTTCAAAATATTTC+TGG + chr6_3:24604757-24604776 Msa0945700:intron 15.0%
!!! CATTTTTAAAATTACTGATA+AGG - chr6_3:24604790-24604809 None:intergenic 15.0%
!!! CTTATCAGTAATTTTAAAAA+TGG + chr6_3:24604788-24604807 Msa0945700:intron 15.0%
!!! GTTTTTAACTTTTTATATGA+GGG - chr6_3:24604969-24604988 None:intergenic 15.0%
!!! AGTTTTTAACTTTTTATATG+AGG - chr6_3:24604970-24604989 None:intergenic 15.0%
!! AAGTTAAAAACTTCATTTAT+TGG + chr6_3:24604978-24604997 Msa0945700:intron 15.0%
!! TATGCAAAAAAATAATGATA+AGG + chr6_3:24605620-24605639 Msa0945700:intron 15.0%
!! ATGCAAAAAAATAATGATAA+GGG + chr6_3:24605621-24605640 Msa0945700:intron 15.0%
!! TATTCTTATAAACATTTGTT+AGG + chr6_3:24605991-24606010 Msa0945700:intron 15.0%
!!! ATTCTTATAAACATTTGTTA+GGG + chr6_3:24605992-24606011 Msa0945700:intron 15.0%
!!! TAGTGAATACTTTATTTTTT+AGG + chr6_3:24607473-24607492 Msa0945700:three_prime_UTR 15.0%
!! TAAATAAAAGAAAGTGAAGA+GGG - chr6_3:24601174-24601193 None:intergenic 20.0%
!! ATAAATAAAAGAAAGTGAAG+AGG - chr6_3:24601175-24601194 None:intergenic 20.0%
!!! AACTATTTTTTGAACACTAA+TGG + chr6_3:24601286-24601305 Msa0945700:intron 20.0%
!!! CTTTTACTTGTTTTAATTTG+TGG + chr6_3:24601352-24601371 Msa0945700:intron 20.0%
!! AAATCAAAAGTTTGAACTAT+TGG + chr6_3:24601471-24601490 Msa0945700:intron 20.0%
!! TGAAAATTATTGTACTAAGA+CGG - chr6_3:24601614-24601633 None:intergenic 20.0%
!!! ATTTATTGTTTTATGCAGAA+TGG + chr6_3:24601633-24601652 Msa0945700:intron 20.0%
!!! ATTTTCTGTTTTAAAACAGT+TGG + chr6_3:24601906-24601925 Msa0945700:intron 20.0%
!! AACAAATCAAATAAAAAGCA+TGG + chr6_3:24602969-24602988 Msa0945700:three_prime_UTR 20.0%
!! TATCAAAATTATAGTCCTTA+TGG + chr6_3:24603030-24603049 Msa0945700:three_prime_UTR 20.0%
!!! CAAGTTGAATAAAATACAAA+GGG - chr6_3:24603477-24603496 None:intergenic 20.0%
!!! TCAAGTTGAATAAAATACAA+AGG - chr6_3:24603478-24603497 None:intergenic 20.0%
!!! AGAAATAAGTTCTAATGTTT+TGG - chr6_3:24603541-24603560 None:intergenic 20.0%
!! AAGAATACAAAAACATAATC+CGG - chr6_3:24603596-24603615 None:intergenic 20.0%
!! TGTAGAAAACTTAAATAAAC+TGG + chr6_3:24604127-24604146 Msa0945700:three_prime_UTR 20.0%
!! ATTTGAAGGCAATAAATAAA+TGG + chr6_3:24604185-24604204 Msa0945700:three_prime_UTR 20.0%
!! ATGTATATACACTTAATAAC+AGG - chr6_3:24604507-24604526 None:intergenic 20.0%
!!! AAATTTAATTTGCTCCATAA+AGG - chr6_3:24604730-24604749 None:intergenic 20.0%
!! TTTATGGAGCAAATTAAATT+TGG + chr6_3:24604729-24604748 Msa0945700:intron 20.0%
!!! TTTTTATATGAGGGTAAATT+TGG - chr6_3:24604960-24604979 None:intergenic 20.0%
!! TTTAACATCGTTGTTTATAA+AGG + chr6_3:24605298-24605317 Msa0945700:intron 20.0%
!! CAAAACTTATCATAGATTTA+CGG + chr6_3:24605471-24605490 Msa0945700:intron 20.0%
!! GAAACCTTGAAAAATAATTA+TGG - chr6_3:24605518-24605537 Msa0945710:three_prime_UTR 20.0%
!!! TAATTATTTTTCAAGGTTTC+CGG + chr6_3:24605518-24605537 Msa0945700:intron 20.0%
!! AATAATGATAAGGGTAAAAT+TGG + chr6_3:24605630-24605649 Msa0945700:intron 20.0%
!! AACTAACTAACCTTAATATT+GGG - chr6_3:24605714-24605733 Msa0945710:three_prime_UTR 20.0%
!! AGAAATGTTTAGTTAATTAC+TGG - chr6_3:24605818-24605837 Msa0945710:exon 20.0%
!! AAGAGAATAAAATAGCATAA+AGG + chr6_3:24605963-24605982 Msa0945700:intron 20.0%
!! AGAGAATAAAATAGCATAAA+GGG + chr6_3:24605964-24605983 Msa0945700:intron 20.0%
!!! CAAAATAGATTGATTGATTT+AGG + chr6_3:24606106-24606125 Msa0945700:intron 20.0%
!! AAAAGAAAGTCATTACAATT+TGG + chr6_3:24606242-24606261 Msa0945700:intron 20.0%
!! AGAACTAGATTAGAAATATT+CGG + chr6_3:24606344-24606363 Msa0945700:intron 20.0%
!! AATCAAAATCAACAATGTAA+AGG - chr6_3:24606906-24606925 Msa0945710:intron 20.0%
!!! GATTTTCTTTTGATGTTTAA+AGG + chr6_3:24606922-24606941 Msa0945700:intron 20.0%
!!! TATTTTCCTTTTGAAGATGT+TGG + chr6_3:24601052-24601071 Msa0945700:exon 25.0%
! ATTAATTTCGTGTTATACTG+TGG + chr6_3:24601209-24601228 Msa0945700:intron 25.0%
! TTAATTTCGTGTTATACTGT+GGG + chr6_3:24601210-24601229 Msa0945700:intron 25.0%
!!! TTTAATTTGTGGTATGCAAA+TGG + chr6_3:24601363-24601382 Msa0945700:intron 25.0%
!!! TTTTTTCTTGGGTAGTTAAA+TGG + chr6_3:24601388-24601407 Msa0945700:intron 25.0%
! CATAATTCATTTAATTCCTC+TGG - chr6_3:24601706-24601725 None:intergenic 25.0%
! AGGAATTAAATGAATTATGC+AGG + chr6_3:24601707-24601726 Msa0945700:CDS 25.0%
! GGAATTAAATGAATTATGCA+GGG + chr6_3:24601708-24601727 Msa0945700:CDS 25.0%
! TAAAGAAATATATTGACACG+CGG - chr6_3:24601793-24601812 None:intergenic 25.0%
!! TTTAAAACAGTTGGAAGAAT+TGG + chr6_3:24601915-24601934 Msa0945700:intron 25.0%
! AAGAATTGGAAAAAGCTATT+GGG + chr6_3:24601929-24601948 Msa0945700:CDS 25.0%
! ATTCTTAAAGCAGCATAATT+AGG - chr6_3:24602438-24602457 None:intergenic 25.0%
!! ATAAATCGTGATTTTAAGCA+AGG - chr6_3:24602673-24602692 None:intergenic 25.0%
!!! ATGATGATCATTTTTCTACT+TGG + chr6_3:24602848-24602867 Msa0945700:CDS 25.0%
!! TGATTGTTTTCAAAACCATA+AGG - chr6_3:24603048-24603067 None:intergenic 25.0%
! ATTTGGACATTATGCATAAA+AGG - chr6_3:24603133-24603152 None:intergenic 25.0%
! ATGTCCAAATTACAAAATAG+AGG + chr6_3:24603143-24603162 Msa0945700:three_prime_UTR 25.0%
!! TTTGCCTCTATTTTGTAATT+TGG - chr6_3:24603150-24603169 None:intergenic 25.0%
!!! CGAGATCTTTTTTATATGTT+CGG + chr6_3:24603245-24603264 Msa0945700:three_prime_UTR 25.0%
!! GGCAAATAGATTAATCATTT+TGG + chr6_3:24603349-24603368 Msa0945700:three_prime_UTR 25.0%
! TACAGTAATTAAGAAAGCAA+AGG - chr6_3:24603408-24603427 None:intergenic 25.0%
! TTTATTCAACTTGAGCTAAA+CGG + chr6_3:24603484-24603503 Msa0945700:three_prime_UTR 25.0%
! AGAATACAAAAACATAATCC+GGG - chr6_3:24603595-24603614 None:intergenic 25.0%
! TTAAGGAAAAAGGAATTATC+TGG - chr6_3:24603691-24603710 None:intergenic 25.0%
!! ATTCCTTTTTCCTTAAAACA+TGG + chr6_3:24603695-24603714 Msa0945700:three_prime_UTR 25.0%
! ATATATCTTCTCTTACAACA+TGG + chr6_3:24603940-24603959 Msa0945700:three_prime_UTR 25.0%
!! ACGATGAAATCATTCTTTTT+AGG + chr6_3:24604150-24604169 Msa0945700:three_prime_UTR 25.0%
! TGATTGATAAAAGGTCAAAT+GGG + chr6_3:24604259-24604278 Msa0945700:three_prime_UTR 25.0%
! TATTGTTTAATGCAACTTCT+AGG + chr6_3:24604538-24604557 Msa0945700:intron 25.0%
! ATTGTTTAATGCAACTTCTA+GGG + chr6_3:24604539-24604558 Msa0945700:intron 25.0%
!!! ATTTAAGTTTTCGGTTTAGT+CGG + chr6_3:24604652-24604671 Msa0945700:intron 25.0%
! TTCCTAATATTGGTATGAAT+GGG - chr6_3:24604883-24604902 None:intergenic 25.0%
! TTTCCTAATATTGGTATGAA+TGG - chr6_3:24604884-24604903 None:intergenic 25.0%
! GTTGTTCATGTTAAATGTAT+GGG - chr6_3:24604938-24604957 None:intergenic 25.0%
!!! TCGTTTTTCAAGAAACAAAT+CGG - chr6_3:24605198-24605217 None:intergenic 25.0%
!! ATTTGTTTCTTGAAAAACGA+AGG + chr6_3:24605198-24605217 Msa0945700:intron 25.0%
!!! ACGTCCATAATTATTTTTCA+AGG + chr6_3:24605511-24605530 Msa0945700:intron 25.0%
! ATTTGTGGGAAAAAAAATAC+CGG - chr6_3:24605540-24605559 Msa0945710:three_prime_UTR 25.0%
!!! GTATTTTTTTTCCCACAAAT+TGG + chr6_3:24605540-24605559 Msa0945700:intron 25.0%
!! TGGATTTATGAGTATTTTGT+AGG + chr6_3:24605650-24605669 Msa0945700:intron 25.0%
!! GGATTTATGAGTATTTTGTA+GGG + chr6_3:24605651-24605670 Msa0945700:intron 25.0%
!! GATTTATGAGTATTTTGTAG+GGG + chr6_3:24605652-24605671 Msa0945700:intron 25.0%
! ACTAACTAACCTTAATATTG+GGG - chr6_3:24605713-24605732 Msa0945710:three_prime_UTR 25.0%
! CAACTAACTAACCTTAATAT+TGG - chr6_3:24605715-24605734 Msa0945710:three_prime_UTR 25.0%
!! CTTATTATGACTCTTTAAAG+TGG - chr6_3:24605778-24605797 Msa0945710:three_prime_UTR 25.0%
!!! GATTTTTGAGAAGTAATTCA+TGG - chr6_3:24606060-24606079 Msa0945710:intron 25.0%
! ATCTATGATTTCTTTACTCT+CGG + chr6_3:24606077-24606096 Msa0945700:intron 25.0%
!! CATTTTATCTTAAACGTGAA+AGG + chr6_3:24606641-24606660 Msa0945700:intron 25.0%
! GGTTTATGTTACACAAAAAA+AGG + chr6_3:24606865-24606884 Msa0945700:intron 25.0%
!! TCTTTTGATGTTTAAAGGTT+AGG + chr6_3:24606927-24606946 Msa0945700:intron 25.0%
!! CTTTTGATGTTTAAAGGTTA+GGG + chr6_3:24606928-24606947 Msa0945700:intron 25.0%
! ATGAAATGAACAAAAGAACT+AGG + chr6_3:24607010-24607029 Msa0945700:intron 25.0%
! TGAAATGAACAAAAGAACTA+GGG + chr6_3:24607011-24607030 Msa0945700:intron 25.0%
! GACATATATAAGCTTAACTT+AGG - chr6_3:24607101-24607120 Msa0945710:intron 25.0%
! AAGTTAAGCTTATATATGTC+TGG + chr6_3:24607101-24607120 Msa0945700:intron 25.0%
! AGTTAAGCTTATATATGTCT+GGG + chr6_3:24607102-24607121 Msa0945700:intron 25.0%
AAAGCAAAAGAAGAAGAAGA+AGG - chr6_3:24600899-24600918 None:intergenic 30.0%
AGTAGTTGCTTATGTGTATA+TGG - chr6_3:24600956-24600975 None:intergenic 30.0%
GAATATGATTCCAAGATCAA+AGG - chr6_3:24601012-24601031 None:intergenic 30.0%
TAGCTAATAGTTTCGATCTA+TGG + chr6_3:24601075-24601094 Msa0945700:CDS 30.0%
! AACACTAATGGTAGTGAATT+TGG + chr6_3:24601298-24601317 Msa0945700:intron 30.0%
! ACACTAATGGTAGTGAATTT+GGG + chr6_3:24601299-24601318 Msa0945700:intron 30.0%
!!! ATGCAAATGGAGTTTTTTCT+TGG + chr6_3:24601376-24601395 Msa0945700:intron 30.0%
!!! TGCAAATGGAGTTTTTTCTT+GGG + chr6_3:24601377-24601396 Msa0945700:intron 30.0%
TAAATGGAACAATAGAGACA+AGG + chr6_3:24601404-24601423 Msa0945700:intron 30.0%
GAAGAATTGGAAAAAGCTAT+TGG + chr6_3:24601928-24601947 Msa0945700:CDS 30.0%
!! ATGTAAATGCTTTTTACCGT+TGG + chr6_3:24602250-24602269 Msa0945700:CDS 30.0%
!! TGTAAATGCTTTTTACCGTT+GGG + chr6_3:24602251-24602270 Msa0945700:CDS 30.0%
!! AATTTTTGTTTCCAGAAGAG+AGG - chr6_3:24602540-24602559 None:intergenic 30.0%
AAAATTCGAAGAATATCCTC+AGG + chr6_3:24602554-24602573 Msa0945700:CDS 30.0%
GAAAGAGACATGTAAAAGAT+AGG + chr6_3:24602630-24602649 Msa0945700:intron 30.0%
TTGTAAGGCATGATATTTGT+CGG - chr6_3:24602706-24602725 None:intergenic 30.0%
! TTTTTCACTCTGCAGATTTT+TGG + chr6_3:24602743-24602762 Msa0945700:intron 30.0%
! CAAGTGTAACTTTAAGAGAA+CGG - chr6_3:24602823-24602842 None:intergenic 30.0%
AAGCGCATATTGATACATAT+GGG - chr6_3:24602921-24602940 None:intergenic 30.0%
!! AATATCCGAGTAACTAGTTT+TGG + chr6_3:24603007-24603026 Msa0945700:three_prime_UTR 30.0%
TGATACCAAAACTAGTTACT+CGG - chr6_3:24603015-24603034 None:intergenic 30.0%
TAAAAGGAACATGAACAAGA+GGG - chr6_3:24603117-24603136 None:intergenic 30.0%
ATAAAAGGAACATGAACAAG+AGG - chr6_3:24603118-24603137 None:intergenic 30.0%
ACAGGTGCAGATAAAATATT+GGG - chr6_3:24603214-24603233 None:intergenic 30.0%
AACAGGTGCAGATAAAATAT+TGG - chr6_3:24603215-24603234 None:intergenic 30.0%
!!! TTGAGGGAATATTTTTAGCT+AGG + chr6_3:24603283-24603302 Msa0945700:three_prime_UTR 30.0%
TCTATTTGCCAAAACATGAT+TGG - chr6_3:24603339-24603358 None:intergenic 30.0%
!!! CAACCATGTTTTAAGGAAAA+AGG - chr6_3:24603701-24603720 None:intergenic 30.0%
! CTTTTTCCTTAAAACATGGT+TGG + chr6_3:24603699-24603718 Msa0945700:three_prime_UTR 30.0%
! TAGTTTCCAACCATGTTTTA+AGG - chr6_3:24603708-24603727 None:intergenic 30.0%
! ACGTGAATAAACTATTTTGC+TGG - chr6_3:24603789-24603808 None:intergenic 30.0%
!! AATGAAGAGCTTCTACTTTT+GGG - chr6_3:24603827-24603846 None:intergenic 30.0%
TTGCCTTCAAATAAAAGTCT+AGG - chr6_3:24604177-24604196 None:intergenic 30.0%
ATGTGTATGAATGAATGTTG+TGG + chr6_3:24604208-24604227 Msa0945700:three_prime_UTR 30.0%
! TTCTGATGGTGATTGATAAA+AGG + chr6_3:24604250-24604269 Msa0945700:three_prime_UTR 30.0%
GTGATTGATAAAAGGTCAAA+TGG + chr6_3:24604258-24604277 Msa0945700:three_prime_UTR 30.0%
TGTCACATTCTTGTATTTAG+TGG + chr6_3:24604342-24604361 Msa0945700:three_prime_UTR 30.0%
! TATGTCTACTTTAGTTTCCT+GGG + chr6_3:24604481-24604500 Msa0945700:three_prime_UTR 30.0%
AAACTTAAATGGTCGGAATT+GGG - chr6_3:24604642-24604661 None:intergenic 30.0%
AAAACTTAAATGGTCGGAAT+TGG - chr6_3:24604643-24604662 None:intergenic 30.0%
!! ATTCCGACCATTTAAGTTTT+CGG + chr6_3:24604643-24604662 Msa0945700:intron 30.0%
AAACCGAAAACTTAAATGGT+CGG - chr6_3:24604649-24604668 None:intergenic 30.0%
GACTAAACCGAAAACTTAAA+TGG - chr6_3:24604653-24604672 None:intergenic 30.0%
GGGGTAAAATTTCCTAATAT+TGG - chr6_3:24604893-24604912 None:intergenic 30.0%
GGTTGTTCATGTTAAATGTA+TGG - chr6_3:24604939-24604958 None:intergenic 30.0%
AAAACGTATAGCAGTTGTTT+AGG + chr6_3:24605116-24605135 Msa0945700:intron 30.0%
TTTAGGTCAGATCTATTTAC+CGG + chr6_3:24605133-24605152 Msa0945700:intron 30.0%
AAACCATAAGGGATTCAATA+CGG - chr6_3:24605162-24605181 None:intergenic 30.0%
!!! CGTTTTTCAAGAAACAAATC+GGG - chr6_3:24605197-24605216 None:intergenic 30.0%
AAAAACGAAGGTCTTACTAT+AGG + chr6_3:24605210-24605229 Msa0945700:intron 30.0%
AAAACGAAGGTCTTACTATA+GGG + chr6_3:24605211-24605230 Msa0945700:intron 30.0%
CATCGTTGTTTATAAAGGTA+TGG + chr6_3:24605303-24605322 Msa0945700:intron 30.0%
! GTGATGTTGCATTTTATTCA+TGG - chr6_3:24605431-24605450 None:intergenic 30.0%
!! TGATAAGTTTTGTCAACACA+TGG - chr6_3:24605463-24605482 Msa0945710:three_prime_UTR 30.0%
GTATAATGTCCCCAATATTA+AGG + chr6_3:24605701-24605720 Msa0945700:intron 30.0%
AAATGAATATAGCAAGCTTC+TGG + chr6_3:24605851-24605870 Msa0945700:intron 30.0%
GAATAAAATAGCATAAAGGG+TGG + chr6_3:24605967-24605986 Msa0945700:intron 30.0%
! TTATAAACATTTGTTAGGGC+AGG + chr6_3:24605996-24606015 Msa0945700:intron 30.0%
! TATAAACATTTGTTAGGGCA+GGG + chr6_3:24605997-24606016 Msa0945700:intron 30.0%
TTTCAACTTTGTATACGTGT+TGG + chr6_3:24606138-24606157 Msa0945700:intron 30.0%
!! TATGTGTAAGTTGGTCAAAT+GGG - chr6_3:24606294-24606313 Msa0945710:intron 30.0%
! TGTTAGTATCTTGTTTCCTA+TGG - chr6_3:24606413-24606432 Msa0945710:intron 30.0%
TCGTTTCTGTTTATGTTCAT+TGG - chr6_3:24606584-24606603 Msa0945710:intron 30.0%
!!! TTTTAGCTTTAAGGTCAAAG+AGG - chr6_3:24606694-24606713 Msa0945710:CDS 30.0%
!!! CCAAGGATTTTTTAGCTTTA+AGG - chr6_3:24606703-24606722 Msa0945710:CDS 30.0%
CCTTAAAGCTAAAAAATCCT+TGG + chr6_3:24606700-24606719 Msa0945700:intron 30.0%
TAGATGTTTCTCTATGTTTC+AGG - chr6_3:24606733-24606752 Msa0945710:intron 30.0%
CTTTCAGTTCATGAATGATT+AGG + chr6_3:24606798-24606817 Msa0945700:intron 30.0%
GTTAGGGAAGATGATTAAAT+GGG + chr6_3:24606944-24606963 Msa0945700:intron 30.0%
TGATTAAATGGGATTGATGA+AGG + chr6_3:24606955-24606974 Msa0945700:intron 30.0%
GATTAAATGGGATTGATGAA+GGG + chr6_3:24606956-24606975 Msa0945700:intron 30.0%
CACAACTGATATGTATGTAT+CGG + chr6_3:24607180-24607199 Msa0945700:intron 30.0%
ACAACTGATATGTATGTATC+GGG + chr6_3:24607181-24607200 Msa0945700:intron 30.0%
TGAATAAAATTGGGTTCGTT+TGG - chr6_3:24607261-24607280 Msa0945710:intron 30.0%
CAATGCAAATAGTAGTATAG+TGG - chr6_3:24607390-24607409 Msa0945710:intron 30.0%
CACTATACTACTATTTGCAT+TGG + chr6_3:24607388-24607407 Msa0945700:three_prime_UTR 30.0%
TGGTTTCGCATTATAGAGAA+AGG + chr6_3:24600830-24600849 Msa0945700:five_prime_UTR 35.0%
GGTTTCGCATTATAGAGAAA+GGG + chr6_3:24600831-24600850 Msa0945700:five_prime_UTR 35.0%
GCTTAAACGTTTCTTTCTGA+AGG + chr6_3:24600857-24600876 Msa0945700:five_prime_UTR 35.0%
! TAGCGATTTTCCTTTGATCT+TGG + chr6_3:24600999-24601018 Msa0945700:five_prime_UTR 35.0%
TAGCTACCAACATCTTCAAA+AGG - chr6_3:24601061-24601080 None:intergenic 35.0%
CTTGTCTATGTTTGCATCTA+TGG + chr6_3:24601244-24601263 Msa0945700:intron 35.0%
AATATATTGACACGCGGAAA+TGG - chr6_3:24601787-24601806 None:intergenic 35.0%
TCTGAGGGAATCTAATATTG+AGG + chr6_3:24602047-24602066 Msa0945700:CDS 35.0%
AGGGAATCTAATATTGAGGA+TGG + chr6_3:24602051-24602070 Msa0945700:CDS 35.0%
AAGCACTAAAGATGAATGTG+TGG + chr6_3:24602161-24602180 Msa0945700:CDS 35.0%
CTTTGACGAAAACCTCAATT+CGG + chr6_3:24602193-24602212 Msa0945700:CDS 35.0%
TTTGACGAAAACCTCAATTC+GGG + chr6_3:24602194-24602213 Msa0945700:CDS 35.0%
! GGATGGTTCTACTAATGAAA+AGG + chr6_3:24602272-24602291 Msa0945700:CDS 35.0%
TACTAATGAAAAGGCTTCTG+TGG + chr6_3:24602281-24602300 Msa0945700:CDS 35.0%
CTTAAAGCAGCATAATTAGG+TGG - chr6_3:24602435-24602454 None:intergenic 35.0%
TTTGGATCCTTTCTCTTTAG+GGG - chr6_3:24602517-24602536 None:intergenic 35.0%
GTTTGGATCCTTTCTCTTTA+GGG - chr6_3:24602518-24602537 None:intergenic 35.0%
AGCTGTTCATATGTTCAATC+AGG + chr6_3:24602584-24602603 Msa0945700:CDS 35.0%
! GTGATTTTAAGCAAGGTAGA+AGG - chr6_3:24602666-24602685 None:intergenic 35.0%
TGTAAGGCATGATATTTGTC+GGG - chr6_3:24602705-24602724 None:intergenic 35.0%
GACAAATATCATGCCTTACA+AGG + chr6_3:24602705-24602724 Msa0945700:intron 35.0%
!! GTTAAGAATCTTTTAGGAGC+AGG - chr6_3:24602888-24602907 None:intergenic 35.0%
! CCAGCTGTTAAGAATCTTTT+AGG - chr6_3:24602894-24602913 None:intergenic 35.0%
CCTAAAAGATTCTTAACAGC+TGG + chr6_3:24602891-24602910 Msa0945700:exon 35.0%
CAAGCGCATATTGATACATA+TGG - chr6_3:24602922-24602941 None:intergenic 35.0%
! TAAAAAGCATGGCATTGTCT+AGG + chr6_3:24602980-24602999 Msa0945700:three_prime_UTR 35.0%
! AAAAAGCATGGCATTGTCTA+GGG + chr6_3:24602981-24603000 Msa0945700:three_prime_UTR 35.0%
!!! TTGCGTCTCCTTTTGAAATT+TGG + chr6_3:24603082-24603101 Msa0945700:three_prime_UTR 35.0%
CTTGCTCACCAAATTTCAAA+AGG - chr6_3:24603093-24603112 None:intergenic 35.0%
!!! CTTTTGAAATTTGGTGAGCA+AGG + chr6_3:24603091-24603110 Msa0945700:three_prime_UTR 35.0%
AGGTGCAGATAAAATATTGG+GGG - chr6_3:24603212-24603231 None:intergenic 35.0%
CAGGTGCAGATAAAATATTG+GGG - chr6_3:24603213-24603232 None:intergenic 35.0%
TTTATCTGCACCTGTTCTTA+TGG + chr6_3:24603219-24603238 Msa0945700:three_prime_UTR 35.0%
!! ACAAAGGGTACTACATACAA+TGG - chr6_3:24603462-24603481 None:intergenic 35.0%
CTTCACTCAATCAGTTAAAG+AGG + chr6_3:24603510-24603529 Msa0945700:three_prime_UTR 35.0%
AATCTGAAAATTGTGGCAAC+TGG + chr6_3:24603637-24603656 Msa0945700:three_prime_UTR 35.0%
AACAATCCATCTGAGGAAAA+AGG - chr6_3:24603746-24603765 None:intergenic 35.0%
! GAATGAAGAGCTTCTACTTT+TGG - chr6_3:24603828-24603847 None:intergenic 35.0%
! AAGCCAAATCTTGACTTTTG+AGG + chr6_3:24603848-24603867 Msa0945700:three_prime_UTR 35.0%
!!! ACTTTTGAGGCTGTAAGATA+GGG + chr6_3:24603861-24603880 Msa0945700:three_prime_UTR 35.0%
!! GGACCTAGACTTTTATTTGA+AGG + chr6_3:24604171-24604190 Msa0945700:three_prime_UTR 35.0%
!! AATGAATGTTGTGGTTTTGC+AGG + chr6_3:24604217-24604236 Msa0945700:three_prime_UTR 35.0%
!! ATGAATGTTGTGGTTTTGCA+GGG + chr6_3:24604218-24604237 Msa0945700:three_prime_UTR 35.0%
TATCAATCACCATCAGAACA+AGG - chr6_3:24604248-24604267 None:intergenic 35.0%
TGGAAAAATGAGTCAGTCAA+GGG + chr6_3:24604304-24604323 Msa0945700:three_prime_UTR 35.0%
TACAAGAATGTGACACTGAT+TGG - chr6_3:24604337-24604356 None:intergenic 35.0%
!! GTTGGTAATGGTTATGATGT+CGG - chr6_3:24604428-24604447 None:intergenic 35.0%
!! TTTAGAAAGGTGGTTGGTAA+TGG - chr6_3:24604440-24604459 None:intergenic 35.0%
!! AACCACCTTTCTAAAACGAT+GGG + chr6_3:24604445-24604464 Msa0945700:three_prime_UTR 35.0%
!!! CTATTCCCATCGTTTTAGAA+AGG - chr6_3:24604453-24604472 None:intergenic 35.0%
!! CTTTCTAAAACGATGGGAAT+AGG + chr6_3:24604451-24604470 Msa0945700:three_prime_UTR 35.0%
TAAAACGATGGGAATAGGAT+AGG + chr6_3:24604456-24604475 Msa0945700:three_prime_UTR 35.0%
! GTATGTCTACTTTAGTTTCC+TGG + chr6_3:24604480-24604499 Msa0945700:three_prime_UTR 35.0%
!! TTGCAATGGTTTGAGGTTTT+GGG - chr6_3:24604598-24604617 None:intergenic 35.0%
! TTAGTCGGTTTCGGTTTAAT+CGG + chr6_3:24604667-24604686 Msa0945700:intron 35.0%
AGCCCATTCATACCAATATT+AGG + chr6_3:24604878-24604897 Msa0945700:intron 35.0%
AAGGTTTAAAAGCAGGGTAT+GGG - chr6_3:24604913-24604932 None:intergenic 35.0%
CATGTTAAATGTATGGGTGA+AGG - chr6_3:24604932-24604951 None:intergenic 35.0%
! ACGTTTTCCAGGAAACATAT+TGG - chr6_3:24605103-24605122 None:intergenic 35.0%
TCGGAATTCGAAAACCATAA+GGG - chr6_3:24605173-24605192 None:intergenic 35.0%
ATCGGAATTCGAAAACCATA+AGG - chr6_3:24605174-24605193 None:intergenic 35.0%
TTCAAGAAACAAATCGGGAT+CGG - chr6_3:24605192-24605211 None:intergenic 35.0%
AAACGAAGGTCTTACTATAG+GGG + chr6_3:24605212-24605231 Msa0945700:intron 35.0%
AGAACATCGGAATTAGAACA+GGG - chr6_3:24605384-24605403 None:intergenic 35.0%
AAGAACATCGGAATTAGAAC+AGG - chr6_3:24605385-24605404 None:intergenic 35.0%
ATTTCCATCACGAAGAACAT+CGG - chr6_3:24605397-24605416 None:intergenic 35.0%
! TGCATTTTATTCATGGCTTG+AGG - chr6_3:24605424-24605443 None:intergenic 35.0%
TCCCACAAATTGGAATTTGT+AGG + chr6_3:24605550-24605569 Msa0945700:intron 35.0%
CCCTACAAATTCCAATTTGT+GGG - chr6_3:24605554-24605573 Msa0945710:three_prime_UTR 35.0%
CCCACAAATTGGAATTTGTA+GGG + chr6_3:24605551-24605570 Msa0945700:intron 35.0%
CCACAAATTGGAATTTGTAG+GGG + chr6_3:24605552-24605571 Msa0945700:intron 35.0%
! ATAAACATTTGTTAGGGCAG+GGG + chr6_3:24605998-24606017 Msa0945700:intron 35.0%
!! GTATGTGTAAGTTGGTCAAA+TGG - chr6_3:24606295-24606314 Msa0945710:intron 35.0%
ATTGTCGTGTATGTGTAAGT+TGG - chr6_3:24606303-24606322 Msa0945710:intron 35.0%
TATGGTGAACATGTCATGTA+TGG - chr6_3:24606395-24606414 Msa0945710:intron 35.0%
ATACATGACATGTTCACCAT+AGG + chr6_3:24606394-24606413 Msa0945700:intron 35.0%
AGGAAGTGATTCAATAGCTA+TGG - chr6_3:24606532-24606551 Msa0945710:intron 35.0%
TTGGCACTTTCTTGAAAAGA+TGG - chr6_3:24606565-24606584 Msa0945710:intron 35.0%
CAGAAACGAGTAGAAAGAAA+AGG + chr6_3:24606595-24606614 Msa0945700:intron 35.0%
!! TTAGAGAGTGGATTGAGATT+TGG + chr6_3:24606843-24606862 Msa0945700:intron 35.0%
!! TAGAGAGTGGATTGAGATTT+GGG + chr6_3:24606844-24606863 Msa0945700:intron 35.0%
GGTTAGGGAAGATGATTAAA+TGG + chr6_3:24606943-24606962 Msa0945700:intron 35.0%
!! ATTGTTTCTGGAAGAGGATA+TGG + chr6_3:24606983-24607002 Msa0945700:intron 35.0%
! CTCATTCACTATTGTTGTTG+CGG - chr6_3:24607062-24607081 Msa0945710:intron 35.0%
ACAATAGTGAATGAGGAACT+AGG + chr6_3:24607067-24607086 Msa0945700:intron 35.0%
CAATAGTGAATGAGGAACTA+GGG + chr6_3:24607068-24607087 Msa0945700:intron 35.0%
!! TTCGTTTGGTTTGTATAGGT+CGG - chr6_3:24607247-24607266 Msa0945710:intron 35.0%
TTGTGCGGGTGAATAAAATT+GGG - chr6_3:24607270-24607289 Msa0945710:intron 35.0%
TTTGTGCGGGTGAATAAAAT+TGG - chr6_3:24607271-24607290 Msa0945710:intron 35.0%
! TAGTATAGTGGAAGTTGCTA+GGG - chr6_3:24607378-24607397 Msa0945710:intron 35.0%
! CGAAACCAGTTCTCCTTTTT+CGG - chr6_3:24600818-24600837 None:intergenic 40.0%
ATGGAACAATAGAGACAAGG+AGG + chr6_3:24601407-24601426 Msa0945700:intron 40.0%
TGGAACAATAGAGACAAGGA+GGG + chr6_3:24601408-24601427 Msa0945700:intron 40.0%
GCTTGAGTGATTGTGCAATT+AGG + chr6_3:24601538-24601557 Msa0945700:intron 40.0%
TGAGTGATTGTGCAATTAGG+AGG + chr6_3:24601541-24601560 Msa0945700:intron 40.0%
CAGAATGGAATCAGCATACA+GGG + chr6_3:24601648-24601667 Msa0945700:intron 40.0%
GGTTAAGAGAGAAGAGAGAA+AGG + chr6_3:24601674-24601693 Msa0945700:CDS 40.0%
! CTGCTTTAGGTACTGCTAAA+TGG + chr6_3:24601740-24601759 Msa0945700:CDS 40.0%
! TTTAGGTACTGCTAAATGGC+AGG + chr6_3:24601744-24601763 Msa0945700:CDS 40.0%
!! CTGGGAAATTTGGCTTTCAA+TGG - chr6_3:24602016-24602035 None:intergenic 40.0%
CATTGAAAGCCAAATTTCCC+AGG + chr6_3:24602014-24602033 Msa0945700:CDS 40.0%
! GATTTTGCTGCGTTTCTATC+TGG + chr6_3:24602120-24602139 Msa0945700:CDS 40.0%
! AACTTGTTTCTCCCGAATTG+AGG - chr6_3:24602208-24602227 None:intergenic 40.0%
!! AATGCTTTTTACCGTTGGGA+TGG + chr6_3:24602255-24602274 Msa0945700:CDS 40.0%
CATTAGTAGAACCATCCCAA+CGG - chr6_3:24602269-24602288 None:intergenic 40.0%
CAGATACAACAACCAGTACA+AGG + chr6_3:24602394-24602413 Msa0945700:CDS 40.0%
AAAGCAGCATAATTAGGTGG+AGG - chr6_3:24602432-24602451 None:intergenic 40.0%
AATTGCTGATGAAGATGAGC+AGG + chr6_3:24602461-24602480 Msa0945700:CDS 40.0%
ATTGCTGATGAAGATGAGCA+GGG + chr6_3:24602462-24602481 Msa0945700:CDS 40.0%
GGTTTGGATCCTTTCTCTTT+AGG - chr6_3:24602519-24602538 None:intergenic 40.0%
TTGTTTCCAGAAGAGAGGTT+TGG - chr6_3:24602535-24602554 None:intergenic 40.0%
!!! CTGCAGATTTTTGGTCACAT+TGG + chr6_3:24602752-24602771 Msa0945700:intron 40.0%
GTGTTGTAAGACTTTCTGCA+CGG - chr6_3:24603183-24603202 None:intergenic 40.0%
GTTTGCGTTTGCATGATTGA+GGG + chr6_3:24603267-24603286 Msa0945700:three_prime_UTR 40.0%
CAAAAACATAATCCGGGCTT+CGG - chr6_3:24603589-24603608 None:intergenic 40.0%
GCAACTGGCAAGAATGTTTA+TGG + chr6_3:24603652-24603671 Msa0945700:three_prime_UTR 40.0%
! GCTTTTCCTTTTTCCTCAGA+TGG + chr6_3:24603737-24603756 Msa0945700:three_prime_UTR 40.0%
!! TTTCCTCAGATGGATTGTTG+TGG + chr6_3:24603747-24603766 Msa0945700:three_prime_UTR 40.0%
CAGCCTCAAAAGTCAAGATT+TGG - chr6_3:24603854-24603873 None:intergenic 40.0%
!!! GACTTTTGAGGCTGTAAGAT+AGG + chr6_3:24603860-24603879 Msa0945700:three_prime_UTR 40.0%
TTTGATATATCTGCCTGTGC+TGG + chr6_3:24604284-24604303 Msa0945700:three_prime_UTR 40.0%
CTGGAAAAATGAGTCAGTCA+AGG + chr6_3:24604303-24604322 Msa0945700:three_prime_UTR 40.0%
!!! CATCGTTTTAGAAAGGTGGT+TGG - chr6_3:24604446-24604465 None:intergenic 40.0%
!! CAACCACCTTTCTAAAACGA+TGG + chr6_3:24604444-24604463 Msa0945700:three_prime_UTR 40.0%
!!! TTCCCATCGTTTTAGAAAGG+TGG - chr6_3:24604450-24604469 None:intergenic 40.0%
ATACACTTAATAACAGGCCC+AGG - chr6_3:24604501-24604520 None:intergenic 40.0%
!! TTTAATGCAACTTCTAGGGC+TGG + chr6_3:24604543-24604562 Msa0945700:intron 40.0%
!! GTTGCAATGGTTTGAGGTTT+TGG - chr6_3:24604599-24604618 None:intergenic 40.0%
!! GTTTTCGGTTTAGTCGGTTT+CGG + chr6_3:24604658-24604677 Msa0945700:intron 40.0%
TTCGGTTTAATCGGATAAGC+CGG + chr6_3:24604676-24604695 Msa0945700:intron 40.0%
TCAGTCGGTTAACTCCTTTA+TGG + chr6_3:24604713-24604732 Msa0945700:intron 40.0%
AGGTTTAAAAGCAGGGTATG+GGG - chr6_3:24604912-24604931 None:intergenic 40.0%
GAAGGTTTAAAAGCAGGGTA+TGG - chr6_3:24604914-24604933 None:intergenic 40.0%
TGGGTGAAGGTTTAAAAGCA+GGG - chr6_3:24604919-24604938 None:intergenic 40.0%
ATGGGTGAAGGTTTAAAAGC+AGG - chr6_3:24604920-24604939 None:intergenic 40.0%
TGAAGAACAATCCATTCCTG+TGG + chr6_3:24605041-24605060 Msa0945700:intron 40.0%
AGGAAAACAACCATCGTTTC+CGG + chr6_3:24605075-24605094 Msa0945700:intron 40.0%
TCCAGGAAACATATTGGAAC+CGG - chr6_3:24605097-24605116 None:intergenic 40.0%
! ACAACTGCTATACGTTTTCC+AGG - chr6_3:24605114-24605133 None:intergenic 40.0%
AAGCCGTATTGAATCCCTTA+TGG + chr6_3:24605156-24605175 Msa0945700:intron 40.0%
GAACATCGGAATTAGAACAG+GGG - chr6_3:24605383-24605402 None:intergenic 40.0%
AATTCCGATGTTCTTCGTGA+TGG + chr6_3:24605390-24605409 Msa0945700:intron 40.0%
CCCCTACAAATTCCAATTTG+TGG - chr6_3:24605555-24605574 Msa0945710:three_prime_UTR 40.0%
! TGAGTATTTTGTAGGGGTGA+TGG + chr6_3:24605658-24605677 Msa0945700:intron 40.0%
!!! ATTGCTTTTTTGCAGCACCA+AGG - chr6_3:24605902-24605921 Msa0945710:intron 40.0%
GCACTTTCTTGAAAAGATGG+AGG - chr6_3:24606562-24606581 Msa0945710:intron 40.0%
!! CACTCTCTAAGATCTCTGAA+AGG - chr6_3:24606833-24606852 Msa0945710:intron 40.0%
CTTTCAGAGATCTTAGAGAG+TGG + chr6_3:24606831-24606850 Msa0945700:intron 40.0%
ATGAAGGGAGAGATTGTTTC+TGG + chr6_3:24606971-24606990 Msa0945700:intron 40.0%
CGCAACAACAATAGTGAATG+AGG + chr6_3:24607060-24607079 Msa0945700:intron 40.0%
ATGAAGCCCATGTTTAACCT+AGG - chr6_3:24607128-24607147 Msa0945710:intron 40.0%
AACATGGGCTTCATTCATCT+TGG + chr6_3:24607134-24607153 Msa0945700:intron 40.0%
ACATGGGCTTCATTCATCTT+GGG + chr6_3:24607135-24607154 Msa0945700:intron 40.0%
ACTGATATGTATGTATCGGG+CGG + chr6_3:24607184-24607203 Msa0945700:intron 40.0%
!! TGGGTTCGTTTGGTTTGTAT+AGG - chr6_3:24607251-24607270 Msa0945710:intron 40.0%
! TTTTATTCACCCGCACAAAC+CGG + chr6_3:24607272-24607291 Msa0945700:intron 40.0%
! GTAGTATAGTGGAAGTTGCT+AGG - chr6_3:24607379-24607398 Msa0945710:intron 40.0%
! AGAGGAAGCGTACATATCAG+CGG - chr6_3:24601144-24601163 None:intergenic 45.0%
AGTGAAGAGGGTTTGAAGAG+AGG - chr6_3:24601162-24601181 None:intergenic 45.0%
GCAGAATGGAATCAGCATAC+AGG + chr6_3:24601647-24601666 Msa0945700:intron 45.0%
GAGAGAAAGGTCAAATCCAG+AGG + chr6_3:24601687-24601706 Msa0945700:CDS 45.0%
AGGGAGCTTCAAACTGCTTT+AGG + chr6_3:24601727-24601746 Msa0945700:CDS 45.0%
GGTTGTCATCACCAAGATGT+CGG - chr6_3:24601963-24601982 None:intergenic 45.0%
TATAAACTGCCTGTGCCTAG+TGG - chr6_3:24601989-24602008 None:intergenic 45.0%
CTGCTTCAACCTGGGAAATT+TGG - chr6_3:24602026-24602045 None:intergenic 45.0%
TCCAAATTTACCCACCGAAG+GGG - chr6_3:24602084-24602103 None:intergenic 45.0%
GTCCAAATTTACCCACCGAA+GGG - chr6_3:24602085-24602104 None:intergenic 45.0%
CAACCAGTACAAGGAAGACA+TGG + chr6_3:24602403-24602422 Msa0945700:CDS 45.0%
ACTCCATGTCTTCCTTGTAC+TGG - chr6_3:24602409-24602428 None:intergenic 45.0%
AAGGATCCAAACCTCTCTTC+TGG + chr6_3:24602526-24602545 Msa0945700:CDS 45.0%
GAACATATGAACAGCTCGCA+TGG - chr6_3:24602580-24602599 None:intergenic 45.0%
ATCTGCACCTGTTCTTATGG+AGG + chr6_3:24603222-24603241 Msa0945700:three_prime_UTR 45.0%
GGTTTGCGTTTGCATGATTG+AGG + chr6_3:24603266-24603285 Msa0945700:three_prime_UTR 45.0%
! GCATGCTGCCAATCATGTTT+TGG + chr6_3:24603328-24603347 Msa0945700:three_prime_UTR 45.0%
AGTCCACAACAATCCATCTG+AGG - chr6_3:24603753-24603772 None:intergenic 45.0%
!! AGATGGATTGTTGTGGACTG+TGG + chr6_3:24603754-24603773 Msa0945700:three_prime_UTR 45.0%
! GATTGTTGTGGACTGTGGTT+TGG + chr6_3:24603759-24603778 Msa0945700:three_prime_UTR 45.0%
! TACTTTTGGGCAGCAGATGA+AGG - chr6_3:24603814-24603833 None:intergenic 45.0%
!! CTGACTCATTTTTCCAGCAC+AGG - chr6_3:24604300-24604319 None:intergenic 45.0%
AAATGGTCGGAATTGGGTTC+AGG - chr6_3:24604636-24604655 None:intergenic 45.0%
AATCGGATAAGCCGGTTACA+CGG + chr6_3:24604684-24604703 Msa0945700:intron 45.0%
!! GGAAACGATGGTTGTTTTCC+TGG - chr6_3:24605076-24605095 None:intergenic 45.0%
CATATTGGAACCGGAAACGA+TGG - chr6_3:24605088-24605107 None:intergenic 45.0%
TCCGGTTCCAATATGTTTCC+TGG + chr6_3:24605093-24605112 Msa0945700:intron 45.0%
AAGGGATTCAATACGGCTTC+CGG - chr6_3:24605155-24605174 None:intergenic 45.0%
GTAGGGGTGAACTCTGAATT+CGG + chr6_3:24605568-24605587 Msa0945700:intron 45.0%
! AGGGGTGATGGTATAGATGT+AGG + chr6_3:24605670-24605689 Msa0945700:intron 45.0%
! GGGGTGATGGTATAGATGTA+GGG + chr6_3:24605671-24605690 Msa0945700:intron 45.0%
! GGGTGATGGTATAGATGTAG+GGG + chr6_3:24605672-24605691 Msa0945700:intron 45.0%
! TGGTATAGATGTAGGGGTAC+AGG + chr6_3:24605678-24605697 Msa0945700:intron 45.0%
! GGTATAGATGTAGGGGTACA+GGG + chr6_3:24605679-24605698 Msa0945700:intron 45.0%
GAATATAGCAAGCTTCTGGC+TGG + chr6_3:24605855-24605874 Msa0945700:intron 45.0%
AGATGCAGAATCTCCAACCT+TGG + chr6_3:24605882-24605901 Msa0945700:intron 45.0%
!!! CTTTTTTGCAGCACCAAGGT+TGG - chr6_3:24605898-24605917 Msa0945710:intron 45.0%
CTTGAAAAGATGGAGGCTGA+TGG - chr6_3:24606555-24606574 Msa0945710:intron 45.0%
!! GCTTTAAGGTCAAAGAGGTG+AGG - chr6_3:24606689-24606708 Msa0945710:intron 45.0%
ATGTTTCAGGCGTAGATCCA+AGG - chr6_3:24606720-24606739 Msa0945710:intron 45.0%
!! GGAGAGATTGTTTCTGGAAG+AGG + chr6_3:24606977-24606996 Msa0945700:intron 45.0%
GCTTATATATGTCTGGGCCT+AGG + chr6_3:24607108-24607127 Msa0945700:intron 45.0%
TCTGGGCCTAGGTTAAACAT+GGG + chr6_3:24607119-24607138 Msa0945700:intron 45.0%
ATGTATGTATCGGGCGGAAA+TGG + chr6_3:24607190-24607209 Msa0945700:intron 45.0%
! TGGTTTGTATAGGTCGGCTT+CGG - chr6_3:24607241-24607260 Msa0945710:intron 45.0%
AAGCAATAACCGACCCAATC+CGG - chr6_3:24607344-24607363 Msa0945710:intron 45.0%
!!! TTGTTTTTTTTTAAAAAAAT+TGG + chr6_3:24604835-24604854 Msa0945700:intron 5.0%
TGGAATCAGCATACAGGGCA+TGG + chr6_3:24601653-24601672 Msa0945700:CDS 50.0%
CCTCAGATCTGCTTCAACCT+GGG - chr6_3:24602034-24602053 None:intergenic 50.0%
! CCAGGTTGAAGCAGATCTGA+GGG + chr6_3:24602032-24602051 Msa0945700:CDS 50.0%
AGGATGGTAAGCAACCCCTT+CGG + chr6_3:24602067-24602086 Msa0945700:CDS 50.0%
ACCCCTTCGGTGGGTAAATT+TGG + chr6_3:24602080-24602099 Msa0945700:CDS 50.0%
CGTCCAAATTTACCCACCGA+AGG - chr6_3:24602086-24602105 None:intergenic 50.0%
AGTGCTTTGCACAGTCTCAC+AGG - chr6_3:24602148-24602167 None:intergenic 50.0%
GATGCCACCCCTAAAGAGAA+AGG + chr6_3:24602507-24602526 Msa0945700:CDS 50.0%
! GGATCCTTTCTCTTTAGGGG+TGG - chr6_3:24602514-24602533 None:intergenic 50.0%
CTCGTAAGCTTCGCCTTGTA+AGG - chr6_3:24602721-24602740 None:intergenic 50.0%
AAGGACTTCGAAGCTGTCGT+TGG - chr6_3:24602784-24602803 None:intergenic 50.0%
AGTCCTTTGCATCTGCGACA+TGG + chr6_3:24602797-24602816 Msa0945700:CDS 50.0%
GATCTCGCCTCCATAAGAAC+AGG - chr6_3:24603232-24603251 None:intergenic 50.0%
CTTCCACACGCTACACATGT+GGG - chr6_3:24604405-24604424 None:intergenic 50.0%
!! CAACTTCTAGGGCTGGACAT+CGG + chr6_3:24604550-24604569 Msa0945700:intron 50.0%
CCTCAAACCATTGCAACCCA+CGG + chr6_3:24604602-24604621 Msa0945700:intron 50.0%
! GTTTCAACCGTGGGTTGCAA+TGG - chr6_3:24604612-24604631 None:intergenic 50.0%
GGTTCAGGAGTTTCAACCGT+GGG - chr6_3:24604621-24604640 None:intergenic 50.0%
ATCGGATAAGCCGGTTACAC+GGG + chr6_3:24604685-24604704 Msa0945700:intron 50.0%
GGTCACAACAACCACAGGAA+TGG - chr6_3:24605055-24605074 None:intergenic 50.0%
TTCCTGTGGTTGTTGTGACC+AGG + chr6_3:24605055-24605074 Msa0945700:intron 50.0%
TTCCTGGTCACAACAACCAC+AGG - chr6_3:24605060-24605079 None:intergenic 50.0%
GAAAAGATGGAGGCTGATGG+AGG - chr6_3:24606552-24606571 Msa0945710:intron 50.0%
GCTGAGACTTGAGAGGAATC+AGG - chr6_3:24607040-24607059 Msa0945710:intron 50.0%
GTCTGGGCCTAGGTTAAACA+TGG + chr6_3:24607118-24607137 Msa0945700:intron 50.0%
! GGTTTGTATAGGTCGGCTTC+GGG - chr6_3:24607240-24607259 Msa0945710:intron 50.0%
AAAACCGACCCGCAACAGTT+CGG + chr6_3:24607304-24607323 Msa0945700:intron 50.0%
! ATAGTGGAAGTTGCTAGGGC+TGG - chr6_3:24607374-24607393 Msa0945710:intron 50.0%
TGCTTTCTTCTCTGCAGCCG+AGG + chr6_3:24601106-24601125 Msa0945700:CDS 55.0%
TTTCTTCTCTGCAGCCGAGG+AGG + chr6_3:24601109-24601128 Msa0945700:CDS 55.0%
! AGCGGATTCCTGAACCTCCT+CGG - chr6_3:24601126-24601145 None:intergenic 55.0%
GGGCTAAGCTACCGACATCT+TGG + chr6_3:24601949-24601968 Msa0945700:CDS 55.0%
GTGATGACAACCGAGCCACT+AGG + chr6_3:24601971-24601990 Msa0945700:CDS 55.0%
! CCCAGGTTGAAGCAGATCTG+AGG + chr6_3:24602031-24602050 Msa0945700:CDS 55.0%
CCCTCAGATCTGCTTCAACC+TGG - chr6_3:24602035-24602054 None:intergenic 55.0%
ATGGTAAGCAACCCCTTCGG+TGG + chr6_3:24602070-24602089 Msa0945700:CDS 55.0%
TGGTAAGCAACCCCTTCGGT+GGG + chr6_3:24602071-24602090 Msa0945700:CDS 55.0%
TTACATAGAGGGCCGAAGCC+CGG + chr6_3:24603574-24603593 Msa0945700:three_prime_UTR 55.0%
CAGGGCTCTCCTTGTTCTGA+TGG + chr6_3:24604236-24604255 Msa0945700:three_prime_UTR 55.0%
ACTCCCACATGTGTAGCGTG+TGG + chr6_3:24604399-24604418 Msa0945700:three_prime_UTR 55.0%
GCTTCCACACGCTACACATG+TGG - chr6_3:24604406-24604425 None:intergenic 55.0%
!! TTCTAGGGCTGGACATCGGT+CGG + chr6_3:24604554-24604573 Msa0945700:intron 55.0%
! GGTCGGTTTCGGTCGGAAAT+CGG + chr6_3:24604571-24604590 Msa0945700:intron 55.0%
! CCGTGGGTTGCAATGGTTTG+AGG - chr6_3:24604605-24604624 None:intergenic 55.0%
GGGTTCAGGAGTTTCAACCG+TGG - chr6_3:24604622-24604641 None:intergenic 55.0%
GATAAGCCGGTTACACGGGT+GGG + chr6_3:24604689-24604708 Msa0945700:intron 55.0%
ACTGAACCCACCCGTGTAAC+CGG - chr6_3:24604698-24604717 None:intergenic 55.0%
! GTTACACGGGTGGGTTCAGT+CGG + chr6_3:24604698-24604717 Msa0945700:intron 55.0%
TGTTGCGGCTGAGACTTGAG+AGG - chr6_3:24607047-24607066 Msa0945710:intron 55.0%
GGGCTTCATTCATCTTGGGC+TGG + chr6_3:24607139-24607158 Msa0945700:intron 55.0%
! CGGGCGGAAATGGTTTTCGA+CGG + chr6_3:24607200-24607219 Msa0945700:intron 55.0%
! GGGCGGAAATGGTTTTCGAC+GGG + chr6_3:24607201-24607220 Msa0945700:intron 55.0%
! TTGTATAGGTCGGCTTCGGG+TGG - chr6_3:24607237-24607256 Msa0945710:intron 55.0%
!! TCTCGGTGAACCGGTTTGTG+CGG - chr6_3:24607285-24607304 Msa0945710:intron 55.0%
!! GGTCGGTTTTCTCGGTGAAC+CGG - chr6_3:24607294-24607313 Msa0945710:intron 55.0%
!! CTGTTGCGGGTCGGTTTTCT+CGG - chr6_3:24607302-24607321 Msa0945710:intron 55.0%
ACAGTTCGGTCCATCCGGTT+CGG + chr6_3:24607318-24607337 Msa0945700:intron 55.0%
ACAACCGAGCCACTAGGCAC+AGG + chr6_3:24601977-24601996 Msa0945700:CDS 60.0%
ACTGCCTGTGCCTAGTGGCT+CGG - chr6_3:24601984-24602003 None:intergenic 60.0%
TGAACAGCTCGCATGGCCTG+AGG - chr6_3:24602573-24602592 None:intergenic 60.0%
CGGCCATGTCGCAGATGCAA+AGG - chr6_3:24602803-24602822 None:intergenic 60.0%
! GGCTGGACATCGGTCGGTTT+CGG + chr6_3:24604560-24604579 Msa0945700:intron 60.0%
! GGACATCGGTCGGTTTCGGT+CGG + chr6_3:24604564-24604583 Msa0945700:intron 60.0%
GGATAAGCCGGTTACACGGG+TGG + chr6_3:24604688-24604707 Msa0945700:intron 60.0%
!! CTCGGTGAACCGGTTTGTGC+GGG - chr6_3:24607284-24607303 Msa0945710:intron 60.0%
TGGACCGAACTGTTGCGGGT+CGG - chr6_3:24607311-24607330 Msa0945710:intron 60.0%
CGGATGGACCGAACTGTTGC+GGG - chr6_3:24607315-24607334 Msa0945710:intron 60.0%
CCGGATGGACCGAACTGTTG+CGG - chr6_3:24607316-24607335 Msa0945710:intron 60.0%
CCGCAACAGTTCGGTCCATC+CGG + chr6_3:24607313-24607332 Msa0945700:intron 60.0%
CTCTGCAGCCGAGGAGGTTC+AGG + chr6_3:24601115-24601134 Msa0945700:CDS 65.0%
!! TTCGGTCCATCCGGTTCGGC+CGG + chr6_3:24607322-24607341 Msa0945700:intron 65.0%
!! TCCATCCGGTTCGGCCGGAT+TGG + chr6_3:24607327-24607346 Msa0945700:intron 65.0%
!! CCATCCGGTTCGGCCGGATT+GGG + chr6_3:24607328-24607347 Msa0945700:intron 65.0%
CCCAATCCGGCCGAACCGGA+TGG - chr6_3:24607331-24607350 Msa0945710:intron 70.0%
CCGACCCAATCCGGCCGAAC+CGG - chr6_3:24607335-24607354 Msa0945710:intron 70.0%
!! CCGGTTCGGCCGGATTGGGT+CGG + chr6_3:24607332-24607351 Msa0945700:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 24600812 24607497 24600812 ID=Msa0945700;Name=Msa0945700
chr6_3 mRNA 24600812 24607497 24600812 ID=Msa0945700-mRNA-1;Parent=Msa0945700;Name=Msa0945700-mRNA-1;_AED=0.07;_eAED=0.07;_QI=256|1|1|1|0.75|0.6|5|1771|338
chr6_3 exon 24600812 24601150 24600812 ID=Msa0945700-mRNA-1:exon:7044;Parent=Msa0945700-mRNA-1
chr6_3 exon 24601651 24601765 24601651 ID=Msa0945700-mRNA-1:exon:7045;Parent=Msa0945700-mRNA-1
chr6_3 exon 24601925 24602605 24601925 ID=Msa0945700-mRNA-1:exon:7046;Parent=Msa0945700-mRNA-1
chr6_3 exon 24602758 24604549 24602758 ID=Msa0945700-mRNA-1:exon:7047;Parent=Msa0945700-mRNA-1
chr6_3 exon 24607381 24607497 24607381 ID=Msa0945700-mRNA-1:exon:7048;Parent=Msa0945700-mRNA-1
chr6_3 five_prime_UTR 24600812 24601067 24600812 ID=Msa0945700-mRNA-1:five_prime_utr;Parent=Msa0945700-mRNA-1
chr6_3 CDS 24601068 24601150 24601068 ID=Msa0945700-mRNA-1:cds;Parent=Msa0945700-mRNA-1
chr6_3 CDS 24601651 24601765 24601651 ID=Msa0945700-mRNA-1:cds;Parent=Msa0945700-mRNA-1
chr6_3 CDS 24601925 24602605 24601925 ID=Msa0945700-mRNA-1:cds;Parent=Msa0945700-mRNA-1
chr6_3 CDS 24602758 24602895 24602758 ID=Msa0945700-mRNA-1:cds;Parent=Msa0945700-mRNA-1
chr6_3 three_prime_UTR 24602896 24604549 24602896 ID=Msa0945700-mRNA-1:three_prime_utr;Parent=Msa0945700-mRNA-1
chr6_3 three_prime_UTR 24607381 24607497 24607381 ID=Msa0945700-mRNA-1:three_prime_utr;Parent=Msa0945700-mRNA-1
Gene Sequence

>Msa0945700

ATGTTGGTAGCTAATAGTTTCGATCTATGGCGAAAAGATGCTTTCTTCTCTGCAGCCGAGGAGGTTCAGGAATCCGCTGATATAATGGAATCAGCATACAGGGCATGGTTAAGAGAGAAGAGAGAAAGGTCAAATCCAGAGGAATTAAATGAATTATGCAGGGAGCTTCAAACTGCTTTAGGTACTGCTAAATGGCAGTTGGAAGAATTGGAAAAAGCTATTGGGCTAAGCTACCGACATCTTGGTGATGACAACCGAGCCACTAGGCACAGGCAGTTTATATCTGCCATTGAAAGCCAAATTTCCCAGGTTGAAGCAGATCTGAGGGAATCTAATATTGAGGATGGTAAGCAACCCCTTCGGTGGGTAAATTTGGACGAAGAAGAGCGAGATGATTTTGCTGCGTTTCTATCTGGAACCTGTGAGACTGTGCAAAGCACTAAAGATGAATGTGTGGATGTTTCTACTTTGACGAAAACCTCAATTCGGGAGAAACAAGTTAGCAAAGAAGATGATAATGTGAATGTAAATGCTTTTTACCGTTGGGATGGTTCTACTAATGAAAAGGCTTCTGTGGATGCTATTGCTGTTAACAAAGACAGAGATTATGCAATAGAAATAAAAGCAGATGTCGATTCTAGAAATAGTGATGATGTAGTTTATCAAACAGATACAACAACCAGTACAAGGAAGACATGGAGTCCTCCACCTAATTATGCTGCTTTAAGAATTGTAATTGCTGATGAAGATGAGCAGGGAAATCAACTTACACGAACTGTTGATGCCACCCCTAAAGAGAAAGGATCCAAACCTCTCTTCTGGAAACAAAAATTCGAAGAATATCCTCAGGCCATGCGAGCTGTTCATATGTTCAATCAGATTTTTGGTCACATTGGTCTATGCCAACGACAGCTTCGAAGTCCTTTGCATCTGCGACATGGCCGTTCTCTTAAAGTTACACTTGCTCTAATGATGATCATTTTTCTACTTGGTAAGCTTTCAGTTTCCTGCTCCTAA
Protein sequence

>Msa0945700

MLVANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLREKRERSNPEELNELCRELQTALGTAKWQLEELEKAIGLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEDGKQPLRWVNLDEEERDDFAAFLSGTCETVQSTKDECVDVSTLTKTSIREKQVSKEDDNVNVNAFYRWDGSTNEKASVDAIAVNKDRDYAIEIKADVDSRNSDDVVYQTDTTTSTRKTWSPPPNYAALRIVIADEDEQGNQLTRTVDATPKEKGSKPLFWKQKFEEYPQAMRAVHMFNQIFGHIGLCQRQLRSPLHLRHGRSLKVTLALMMIIFLLGKLSVSCS*