AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0964030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964030 MtrunA17_Chr6g0479161 96.859 1178 31 3 1 1177 1 1173 0.0 2331
Msa0964030 MtrunA17_Chr4g0012511 68.075 1018 289 11 175 1177 15 1011 0.0 1387
Msa0964030 MtrunA17_Chr3g0113591 33.085 671 307 23 188 775 63 674 5.08e-80 281
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0964030 AT1G10170.1 57.284 1215 454 20 1 1177 1 1188 0.0 1340
Msa0964030 AT1G10170.3 57.284 1215 454 20 1 1177 1 1188 0.0 1340
Msa0964030 AT1G10170.4 57.202 1215 455 20 1 1177 1 1188 0.0 1340
Msa0964030 AT1G10170.2 57.956 1194 407 23 1 1177 1 1116 0.0 1334
Msa0964030 AT5G05660.1 32.684 667 312 25 188 775 73 681 8.93e-78 276

Find 394 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTCATAGCTGCCATTT+TGG 0.185574 6_3:+90044331 Msa0964030:CDS
GGACTAGTCAAACCATTATT+TGG 0.208700 6_3:-90044076 None:intergenic
GTGCTAAGTTGGAGCGTAAA+AGG 0.256139 6_3:+90044860 Msa0964030:CDS
CCTCAGCCGTGTGGCCATTC+AGG 0.257209 6_3:+90044310 Msa0964030:CDS
CGCCTTTCGGAATCCATTCT+TGG 0.268701 6_3:-90042452 None:intergenic
TAGAGGGAGGAGTGGGAATA+TGG 0.278869 6_3:+90042881 Msa0964030:CDS
CCATTGTCTGGTCCAAATAA+TGG 0.281236 6_3:+90044064 Msa0964030:CDS
AACGACATTTCTGTGAAATT+AGG 0.281782 6_3:-90043916 None:intergenic
GTAGACATGCATGAGGTTTA+TGG 0.288089 6_3:+90045995 Msa0964030:three_prime_UTR
TCAATTAGTGCAGGAGATTC+AGG 0.294195 6_3:+90042941 Msa0964030:CDS
GGATCACGGAACAGTTTATC+AGG 0.296952 6_3:+90045449 Msa0964030:CDS
GGTGGAGGCGGTGGCGGTGG+TGG 0.304493 6_3:-90042505 None:intergenic
CTGCAGATGCTCCAGCATTC+TGG 0.305367 6_3:-90045488 None:intergenic
GGTGGTGGCGGCGGCGGTGG+TGG 0.306486 6_3:-90042523 None:intergenic
TCCTACTGCATTTGATCCCT+TGG 0.316189 6_3:+90045254 Msa0964030:CDS
AATATGGTGGGGAGGCAATA+TGG 0.320026 6_3:+90042897 Msa0964030:CDS
AGCTCGTGTGCTTGGTGTTA+AGG 0.325842 6_3:+90045206 Msa0964030:CDS
TTTATAGCATTCCACAGTTC+TGG 0.327287 6_3:-90043951 None:intergenic
GTGCATGATTTGTTATGATA+TGG 0.334914 6_3:+90042989 Msa0964030:CDS
TCATGAGAGTGCAAACTTGT+AGG 0.341891 6_3:-90042564 None:intergenic
ACGTGATCCAAAGTGGGTTT+TGG 0.342272 6_3:+90044975 Msa0964030:CDS
GACTTCGGTTACTAGTGCTT+GGG 0.342524 6_3:+90045512 Msa0964030:CDS
GGTGGCGGCGGCGGTGGTGG+AGG 0.344248 6_3:-90042520 None:intergenic
GAGAAGCAATCCATGGAAAA+AGG 0.345057 6_3:+90045569 Msa0964030:CDS
AGTCTTGATGCTCTCCATTT+CGG 0.346151 6_3:+90044913 Msa0964030:CDS
GGCGGTGGCGGTGGTGGATG+TGG 0.346304 6_3:-90042499 None:intergenic
GGTGGTGGTGGCGGCGGCGG+TGG 0.349532 6_3:-90042526 None:intergenic
CCTTCTGCAGGTGGCGCAAA+TGG 0.352114 6_3:+90045834 Msa0964030:CDS
GCTTAAAAGTTCAAACTCAT+TGG 0.353798 6_3:+90046081 Msa0964030:three_prime_UTR
TGCAGTGAACGCTGCTGGCT+GGG 0.354169 6_3:+90045134 Msa0964030:CDS
CAGGTTGGAAAGAAGATTCT+TGG 0.356913 6_3:+90045607 Msa0964030:CDS
TCAGCGTCCCTTGGCAAGTC+TGG 0.357756 6_3:-90045309 None:intergenic
GCCAAGCACATTTCCACAAT+TGG 0.361227 6_3:-90043660 None:intergenic
CTTGTGTCAGCTTCCATGTT+CGG 0.361860 6_3:+90044285 Msa0964030:CDS
CTAGATGCTCCAGCGCCTTT+CGG 0.362730 6_3:-90042465 None:intergenic
TTGCAGTGAACGCTGCTGGC+TGG 0.362960 6_3:+90045133 Msa0964030:CDS
GAAATTACGATGAATCTCTT+TGG 0.374571 6_3:-90045159 None:intergenic
GGCGGTGGTGGAGGCGGTGG+CGG 0.376487 6_3:-90042511 None:intergenic
TTATCGGCGGAGAAGAATCT+AGG 0.377795 6_3:+90043110 Msa0964030:CDS
TACCTGCTTCATTGAATCCT+TGG 0.378916 6_3:+90045703 Msa0964030:CDS
GGTGGTGGAGGCGGTGGCGG+TGG 0.379058 6_3:-90042508 None:intergenic
TCACATTCACCGCAGCTTCC+CGG 0.379093 6_3:-90043716 None:intergenic
AAATACCCCATTGCTCAGTC+TGG 0.381983 6_3:-90046114 None:intergenic
CTCCTCGTTTGTGCCCTTGT+GGG 0.387856 6_3:+90043390 Msa0964030:CDS
TGGAGACTGCCCTCCTTGTT+CGG 0.388322 6_3:+90044351 Msa0964030:CDS
GGCGGCGGTGGTGGAGGCGG+TGG 0.388363 6_3:-90042514 None:intergenic
GGCGGTGGTGGATGTGGTGG+AGG 0.390082 6_3:-90042493 None:intergenic
GTGGTGAATGTGAGCTTGTT+TGG 0.391093 6_3:+90045358 Msa0964030:CDS
GCTCGTGTGCTTGGTGTTAA+GGG 0.393588 6_3:+90045207 Msa0964030:CDS
GGCGGCGGCGGTGGTGGAGG+CGG 0.395015 6_3:-90042517 None:intergenic
ACCCACCTCAGTTGATTTAT+CGG 0.395713 6_3:+90043094 Msa0964030:CDS
AGGGAGGAGTGGGAATATGG+TGG 0.396721 6_3:+90042884 Msa0964030:CDS
CCTCATCGCAGTTGCAGCTC+GGG 0.397199 6_3:-90045421 None:intergenic
GTAAGGAGACGTGCCATGTC+GGG 0.400852 6_3:+90043873 Msa0964030:CDS
GTAATCACCATGTTGCTCAT+AGG 0.408170 6_3:+90042658 Msa0964030:CDS
AGGTTGGAAAGAAGATTCTT+GGG 0.409557 6_3:+90045608 Msa0964030:CDS
CGACTTCGGTTACTAGTGCT+TGG 0.413162 6_3:+90045511 Msa0964030:CDS
AGAAGAATCTAGGGTTTAAC+TGG 0.414213 6_3:+90043120 Msa0964030:CDS
GGGTTTAACTGGCGGTGTCC+TGG 0.415241 6_3:+90043131 Msa0964030:CDS
TGGTTTGACTAGTCCGGATT+GGG 0.416241 6_3:+90044084 Msa0964030:CDS
AAGAAGAATTCTCACCGAAA+TGG 0.417198 6_3:-90044927 None:intergenic
GAATTGAGAAACAAGCAGTT+TGG 0.422971 6_3:-90041188 None:intergenic
AACAGTTGTGGTGGTGGTGG+CGG 0.424484 6_3:-90042535 None:intergenic
CAATGGGGTATTTGACTAAA+GGG 0.425624 6_3:+90046124 Msa0964030:three_prime_UTR
TTCGTAGGTCTGCGCCTATC+TGG 0.426669 6_3:+90043012 Msa0964030:CDS
TCGGTGGCCATGTCATTCTT+AGG 0.426862 6_3:+90044395 Msa0964030:CDS
TGTGGTGGTGGTGGCGGCGG+CGG 0.427035 6_3:-90042529 None:intergenic
GTCATAAGAAGTGTAGCTTC+TGG 0.427840 6_3:+90045771 Msa0964030:CDS
CTCTTGTGACACAAACATAA+AGG 0.430159 6_3:+90041072 Msa0964030:five_prime_UTR
AAGGAGGGCAGTCTCCAAAA+TGG 0.430302 6_3:-90044345 None:intergenic
CATTGCTCAGTCTGGGTAAG+AGG 0.431143 6_3:-90046106 None:intergenic
TGCCGTGAGGTTTGTCATCC+GGG 0.431323 6_3:+90043698 Msa0964030:CDS
CTGCTGAAGTTGTAGATGAT+TGG 0.432067 6_3:+90045880 Msa0964030:CDS
GGTGGCGGTGGTGGATGTGG+TGG 0.434329 6_3:-90042496 None:intergenic
TTGTGGGGTACATGCTTGTA+AGG 0.437273 6_3:+90043856 Msa0964030:CDS
AGTTGTGGTGGTGGTGGCGG+CGG 0.439053 6_3:-90042532 None:intergenic
CTGCCGTGAGGTTTGTCATC+CGG 0.442392 6_3:+90043697 Msa0964030:CDS
CAAGAATCTTCTTTCCAACC+TGG 0.444302 6_3:-90045606 None:intergenic
GTTTCGTTTGTCCAGAATGC+TGG 0.444800 6_3:+90045477 Msa0964030:CDS
TCAATAGCCAAAACCCACTT+TGG 0.445997 6_3:-90044982 None:intergenic
ATGAAAGATAGAGTAGCAAC+TGG 0.449294 6_3:-90043042 None:intergenic
CGGGGAATGTCCACCATGTA+AGG 0.450124 6_3:+90043892 Msa0964030:CDS
AGAGGGAACATGTTGCTCAT+AGG 0.450134 6_3:+90042847 Msa0964030:CDS
ACCGTCCTCCTCGCCAAGAA+TGG 0.451714 6_3:+90042439 Msa0964030:CDS
TGGAGCAACAGCTCCTTGAT+TGG 0.452085 6_3:-90042616 None:intergenic
CTTCTATGCCTAGCAAATGT+TGG 0.453166 6_3:-90042636 None:intergenic
AAATAATGGTTTGACTAGTC+CGG 0.453463 6_3:+90044078 Msa0964030:CDS
TCTTACCCAGACTGAGCAAT+GGG 0.454652 6_3:+90046108 Msa0964030:three_prime_UTR
TTGTGTCTTGCAATGCCATC+CGG 0.460020 6_3:+90043337 Msa0964030:CDS
TTTAAGCATTTACCTAAATG+AGG 0.461411 6_3:-90046065 None:intergenic
GGATTCAATGAAGCAGGTAT+TGG 0.462723 6_3:-90045699 None:intergenic
GGACGCTGATATTAGTGCCT+TGG 0.462738 6_3:+90045323 Msa0964030:CDS
ATATGCCGGCAGCCACTCCT+TGG 0.463791 6_3:-90044583 None:intergenic
TTGGTCAACAGTTGTGGTGG+TGG 0.464804 6_3:-90042541 None:intergenic
GGTGGTGGATGTGGTGGAGG+CGG 0.465000 6_3:-90042490 None:intergenic
TGCTGCTCATCGCGTTGAAA+GGG 0.469782 6_3:+90042776 Msa0964030:CDS
ATGGTTTGACTAGTCCGGAT+TGG 0.470796 6_3:+90044083 Msa0964030:CDS
GGAGGAGTGGGAATATGGTG+GGG 0.471076 6_3:+90042886 Msa0964030:CDS
ATCGCAGTTGCAGCTCGGGC+AGG 0.471207 6_3:-90045417 None:intergenic
AGATGCAAAATATTAGTACT+TGG 0.472851 6_3:+90045009 Msa0964030:CDS
TGTTGCTCATAGGGTTGAAA+GGG 0.473648 6_3:+90042857 Msa0964030:CDS
GGGAGGAGTGGGAATATGGT+GGG 0.475674 6_3:+90042885 Msa0964030:CDS
GAGGGAACATGTTGCTCATA+GGG 0.477766 6_3:+90042848 Msa0964030:CDS
CCTCCTCGTTTGTGCCCTTG+TGG 0.478419 6_3:+90043389 Msa0964030:CDS
CAGCATGTCTTGACCCGACT+TGG 0.479450 6_3:-90043746 None:intergenic
GTTGAACGACAGGAATGCTT+TGG 0.479607 6_3:+90045380 Msa0964030:CDS
AGCTTGTTTGGTTGAACGAC+AGG 0.479698 6_3:+90045370 Msa0964030:CDS
ATGCTGCTCATCGCGTTGAA+AGG 0.479808 6_3:+90042775 Msa0964030:CDS
CTTCAACCAGTTGATGCAAA+TGG 0.481760 6_3:+90044790 Msa0964030:CDS
TGCTGAAGTTGTAGATGATT+GGG 0.482445 6_3:+90045881 Msa0964030:CDS
TCGTAAACCTTTCACAATAC+CGG 0.484211 6_3:-90044533 None:intergenic
CCATTTGCGCCACCTGCAGA+AGG 0.484630 6_3:-90045834 None:intergenic
TCCTCATCGCAGTTGCAGCT+CGG 0.486230 6_3:-90045422 None:intergenic
GAAAGGGGTAGAGGGAGGAG+TGG 0.486469 6_3:+90042873 Msa0964030:CDS
TGCTAAGTTGGAGCGTAAAA+GGG 0.486754 6_3:+90044861 Msa0964030:CDS
ATGTTGCTCATAGGATGGAC+AGG 0.487048 6_3:+90042694 Msa0964030:CDS
AAAGGGGTAGAGGGAGGAGT+GGG 0.488372 6_3:+90042874 Msa0964030:CDS
AGGCATTGTACCGCAAGGTA+GGG 0.488543 6_3:-90044260 None:intergenic
TAATCACCATGTTGCTCATA+GGG 0.489546 6_3:+90042659 Msa0964030:CDS
GTCAACAGTTGTGGTGGTGG+TGG 0.489588 6_3:-90042538 None:intergenic
TCCAATTGTGGAAATGTGCT+TGG 0.493593 6_3:+90043659 Msa0964030:CDS
ACATCGGGACAAGGACATCC+AGG 0.494197 6_3:-90044625 None:intergenic
GAATGGATTCCGAAAGGCGC+TGG 0.495492 6_3:+90042456 Msa0964030:CDS
AAGCTTGCAGTGAACGCTGC+TGG 0.497964 6_3:+90045129 Msa0964030:CDS
TTAACACCAAGCACACGAGC+TGG 0.498030 6_3:-90045204 None:intergenic
CAATTCTTCTTTGCCCCACA+CGG 0.498351 6_3:-90044010 None:intergenic
CAAAAGTGAGGATCCCAATC+CGG 0.499368 6_3:-90044097 None:intergenic
CATAGGGTTGAAAGGGGTAG+AGG 0.499573 6_3:+90042864 Msa0964030:CDS
TTCCAAGGATTCAATGAAGC+AGG 0.500006 6_3:-90045705 None:intergenic
TCTCGTTTCCAGACTTGCCA+AGG 0.500010 6_3:+90045301 Msa0964030:CDS
AAGACCCCAGCTCGTGTGCT+TGG 0.500388 6_3:+90045198 Msa0964030:CDS
ATGCGGGAAGCCTCTTGAAA+AGG 0.500837 6_3:+90043268 Msa0964030:CDS
AAGGTGAATTTGAAGCAGAA+GGG 0.502937 6_3:+90043618 Msa0964030:CDS
TAACACCAAGCACACGAGCT+GGG 0.506872 6_3:-90045203 None:intergenic
GGAGTGGGAATATGGTGGGG+AGG 0.508290 6_3:+90042889 Msa0964030:CDS
GGGTCCTTGTGATCCTTGTC+AGG 0.511887 6_3:+90043526 Msa0964030:CDS
TGTGAAATTAGGACCTTACA+TGG 0.513903 6_3:-90043905 None:intergenic
GCAGCAAGACCCTTCGTTGT+GGG 0.514391 6_3:+90043840 Msa0964030:CDS
GGCATTGTACCGCAAGGTAG+GGG 0.514400 6_3:-90044259 None:intergenic
TGTGATAAGCTTCTTGATTG+TGG 0.515511 6_3:+90043473 Msa0964030:CDS
GCTTCTTTCTTCAGAACCGA+TGG 0.516034 6_3:-90045675 None:intergenic
TGTTGCTCATAGGGTGGAAA+GGG 0.516162 6_3:+90042668 Msa0964030:CDS
TTCTCTTCCTCTTCTCGTCA+AGG 0.516587 6_3:+90041208 Msa0964030:five_prime_UTR
ATGTTGCTCATAGGGTTGAA+AGG 0.517103 6_3:+90042856 Msa0964030:CDS
ATTTGATCCCTTGGTTGACA+TGG 0.517286 6_3:+90045263 Msa0964030:CDS
TGAATCTCCTGCACTAATTG+AGG 0.518054 6_3:-90042939 None:intergenic
ACTAAGGTGGAGCCTTCTGC+AGG 0.518441 6_3:+90045822 Msa0964030:CDS
ATCTGAATTGCATCAAGAAG+TGG 0.519085 6_3:+90043063 Msa0964030:CDS
GTTTGTTACTGAAGAGAGAA+AGG 0.519366 6_3:+90043295 Msa0964030:CDS
GAGGCATTGTACCGCAAGGT+AGG 0.519375 6_3:-90044261 None:intergenic
GGGTTGAAAGGGGTAGAGGG+AGG 0.520521 6_3:+90042868 Msa0964030:CDS
CACGGCTGAGGAACCGAACA+TGG 0.521688 6_3:-90044298 None:intergenic
GAAAAGTGTTGTCCATTGTC+TGG 0.521883 6_3:+90044052 Msa0964030:CDS
GCAATGGGGTATTTGACTAA+AGG 0.521898 6_3:+90046123 Msa0964030:three_prime_UTR
GAGAAAGGAGGGAAGGGTCG+AGG 0.523177 6_3:+90042406 Msa0964030:CDS
GGCAGCTATGAGAGCCTGAA+TGG 0.524476 6_3:-90044324 None:intergenic
ATCAACTGGTTGAAGAGGCA+TGG 0.525894 6_3:-90044782 None:intergenic
TGACGAGGAATGTGCTAAGT+TGG 0.527115 6_3:+90044849 Msa0964030:CDS
AGAGGGAACATGTTGCGCAC+AGG 0.527203 6_3:+90042739 Msa0964030:CDS
GTACCGCAAGGTAGGGGAGG+AGG 0.527467 6_3:-90044253 None:intergenic
AAAGGGAACATGTTGCTCAT+AGG 0.528843 6_3:+90042685 Msa0964030:CDS
ACAACGTTTCACACACATGC+TGG 0.529125 6_3:-90044153 None:intergenic
AGGTGAATTTGAAGCAGAAG+GGG 0.530987 6_3:+90043619 Msa0964030:CDS
ATTCGCAGAATCACCGGTAG+TGG 0.531731 6_3:-90045646 None:intergenic
TTTGGGTGCAGAAGGGACAT+TGG 0.532116 6_3:+90042361 Msa0964030:intron
ATTCTACCCGGTATTGTGAA+AGG 0.532277 6_3:+90044526 Msa0964030:CDS
CTGTTGCTCCAACATTTGCT+AGG 0.532327 6_3:+90042628 Msa0964030:CDS
TGTATGGCTCTCTGTCACCC+TGG 0.532396 6_3:+90044607 Msa0964030:CDS
GTGCTCCAAGGAGTGGCTGC+CGG 0.533669 6_3:+90044578 Msa0964030:CDS
AAGAATCTTCTTTCCAACCT+GGG 0.533818 6_3:-90045605 None:intergenic
ATAGATACCTTGACGAGAAG+AGG 0.534503 6_3:-90041215 None:intergenic
GAGAAGAATACTAATAATGA+TGG 0.534781 6_3:+90042585 Msa0964030:CDS
ATTCGTGTGGCGAACCATGC+GGG 0.536514 6_3:+90043252 Msa0964030:CDS
GAGGGAACATGTTGCGCACA+GGG 0.537291 6_3:+90042740 Msa0964030:CDS
TGGAGCATCTGCAGCGACTT+CGG 0.537736 6_3:+90045497 Msa0964030:CDS
TGTGTCTTGCAATGCCATCC+GGG 0.537865 6_3:+90043338 Msa0964030:CDS
CGCCGATAAATCAACTGAGG+TGG 0.538096 6_3:-90043096 None:intergenic
GAGAATTCACATCTTACATC+GGG 0.538340 6_3:-90044640 None:intergenic
ACTGATTTAGCATGTGCTTG+TGG 0.539545 6_3:+90044217 Msa0964030:CDS
CGGGTCAAGACATGCTGTTG+TGG 0.539727 6_3:+90043752 Msa0964030:CDS
GGGTCAAGACATGCTGTTGT+GGG 0.540879 6_3:+90043753 Msa0964030:CDS
TGAGAATGATTGCTGAAAGA+TGG 0.540969 6_3:+90045106 Msa0964030:CDS
GCAAATGTTCCTTGTGATGT+TGG 0.541124 6_3:+90044697 Msa0964030:CDS
GATGAACAATGGACCACTAC+CGG 0.541527 6_3:+90045633 Msa0964030:CDS
TCATGATTCAGAACATTCCA+AGG 0.543205 6_3:-90045720 None:intergenic
GGATCAAATGCAGTAGGAAG+CGG 0.544368 6_3:-90045249 None:intergenic
CAGCGGTTCTCGACCCAGGT+TGG 0.544602 6_3:+90045592 Msa0964030:CDS
CTTTCTTCAGAACCGATGGT+TGG 0.545245 6_3:-90045671 None:intergenic
CGGGTAGAATATCACAAGGT+GGG 0.546299 6_3:-90044513 None:intergenic
ACAAGGGCACAAACGAGGAG+GGG 0.546918 6_3:-90043387 None:intergenic
TTTGACACAGGCACCGAACA+AGG 0.546948 6_3:-90044364 None:intergenic
CACAAGGGCACAAACGAGGA+GGG 0.548702 6_3:-90043388 None:intergenic
CCTGAATGGCCACACGGCTG+AGG 0.549497 6_3:-90044310 None:intergenic
ATCGAGTTCGAGTTCATCAT+CGG 0.549662 6_3:+90045743 Msa0964030:CDS
TTACTTGTCAAAAGCCGTGT+GGG 0.549777 6_3:+90043996 Msa0964030:CDS
GTTACAATTACTTGTTCTTG+TGG 0.551460 6_3:+90044664 Msa0964030:CDS
CCACCTTGTGATATTCTACC+CGG 0.551617 6_3:+90044514 Msa0964030:CDS
AAGGGAACATGTTGCTCAGA+GGG 0.553158 6_3:+90042794 Msa0964030:CDS
AAAGGTGAATTTGAAGCAGA+AGG 0.553252 6_3:+90043617 Msa0964030:CDS
CTCGTTTCCAGACTTGCCAA+GGG 0.553320 6_3:+90045302 Msa0964030:CDS
CAAAGACGAGAAAGGAGGGA+AGG 0.553775 6_3:+90042399 Msa0964030:CDS
TGGCGAGGAGGACGGTGTGA+AGG 0.554470 6_3:-90042432 None:intergenic
GATGCAAAATATTAGTACTT+GGG 0.554813 6_3:+90045010 Msa0964030:CDS
TAGCTTGCCTCAATTAGTGC+AGG 0.555352 6_3:+90042932 Msa0964030:CDS
CGTAAACCTTTCACAATACC+GGG 0.557381 6_3:-90044532 None:intergenic
GGCGAGGAGGACGGTGTGAA+GGG 0.558326 6_3:-90042431 None:intergenic
ATTCTTGGGGCGATGAACAA+TGG 0.558757 6_3:+90045622 Msa0964030:CDS
AAATGGAGAGCATCAAGACT+TGG 0.559119 6_3:-90044910 None:intergenic
TTGCTACTCGCTGTTCTGAT+CGG 0.560740 6_3:+90043423 Msa0964030:CDS
TCGCTGTTCTGATCGGCAGT+CGG 0.561149 6_3:+90043430 Msa0964030:CDS
TCAACTGGTTGAAGAGGCAT+GGG 0.561193 6_3:-90044781 None:intergenic
AAGGCAGCGGTTCTCGACCC+AGG 0.562109 6_3:+90045588 Msa0964030:CDS
TGTAAGGAGACGTGCCATGT+CGG 0.562644 6_3:+90043872 Msa0964030:CDS
TGTTTCTCAGAGGGTGGAGA+GGG 0.564878 6_3:+90042722 Msa0964030:CDS
AGCATGTACCCCACAACGAA+GGG 0.565625 6_3:-90043849 None:intergenic
TGTTGCACAGACTGACAACC+AGG 0.566747 6_3:-90043149 None:intergenic
TCCTTGTCAGGTGCTAATTG+AGG 0.567783 6_3:+90043538 Msa0964030:CDS
CATGGTTCGCCACACGAATG+AGG 0.568538 6_3:-90043248 None:intergenic
AAGCAGCGATGTCTCAACTA+AGG 0.568704 6_3:+90045806 Msa0964030:CDS
CCATTATTTGGACCAGACAA+TGG 0.568837 6_3:-90044064 None:intergenic
GGAATCCATTCTTGGCGAGG+AGG 0.569499 6_3:-90042444 None:intergenic
TTTGCATCAACTGGTTGAAG+AGG 0.569727 6_3:-90044787 None:intergenic
TCCATTCTTGGCGAGGAGGA+CGG 0.569808 6_3:-90042440 None:intergenic
TGCAGCAAGACCCTTCGTTG+TGG 0.573280 6_3:+90043839 Msa0964030:CDS
TTCGGAATCCATTCTTGGCG+AGG 0.573587 6_3:-90042447 None:intergenic
TGTTGCTCAGAGGGTGGAGA+GGG 0.573681 6_3:+90042803 Msa0964030:CDS
TTGGATATTCGCAGAATCAC+CGG 0.574318 6_3:-90045652 None:intergenic
GCTTGCAACAAAGACGAGAA+AGG 0.574653 6_3:+90042391 Msa0964030:CDS
AAGCGGCGCATTTAGAGTTG+TGG 0.575518 6_3:-90045232 None:intergenic
ATGTTGCTCATAGGGTGGAA+AGG 0.576688 6_3:+90042667 Msa0964030:CDS
CGTTTAGACGTGATCCAAAG+TGG 0.576848 6_3:+90044968 Msa0964030:CDS
GCATTGTCTAGTCCTTCCAC+AGG 0.577506 6_3:-90044458 None:intergenic
CAGCTTCTTCCCACACAGCA+TGG 0.577664 6_3:-90044122 None:intergenic
GATGGTGGTTCATCCAATCA+AGG 0.578300 6_3:+90042603 Msa0964030:CDS
TGGCGCAAATGGAGGAAACT+CGG 0.578640 6_3:+90045845 Msa0964030:CDS
GCCTCAATTAGCACCTGACA+AGG 0.579213 6_3:-90043539 None:intergenic
ATAGGGTTGAAAGGGGTAGA+GGG 0.579536 6_3:+90042865 Msa0964030:CDS
GAGAGTGCAAACTTGTAGGT+TGG 0.579722 6_3:-90042560 None:intergenic
AAAGACGAGAAAGGAGGGAA+GGG 0.580583 6_3:+90042400 Msa0964030:CDS
TGCAACTGCGATGAGGAGGT+TGG 0.581146 6_3:+90045428 Msa0964030:CDS
TGAGGCAAGCTAGAGTCCCT+TGG 0.582117 6_3:-90042921 None:intergenic
GCACTAATATCAGCGTCCCT+TGG 0.582195 6_3:-90045318 None:intergenic
TTTGTTATGATATGGTTCGT+AGG 0.582556 6_3:+90042997 Msa0964030:CDS
TGTTGCTCATCGTGTGGAGA+GGG 0.582639 6_3:+90042830 Msa0964030:CDS
CTCTTACCCAGACTGAGCAA+TGG 0.583365 6_3:+90046107 Msa0964030:three_prime_UTR
CCCGAGCTGCAACTGCGATG+AGG 0.583388 6_3:+90045421 Msa0964030:CDS
AATGCTTTACACGGAGGACA+TGG 0.583972 6_3:-90043362 None:intergenic
TATCGGCGGAGAAGAATCTA+GGG 0.584465 6_3:+90043111 Msa0964030:CDS
GCTTGGGGAGGAACGAAAGA+GGG 0.586384 6_3:+90045528 Msa0964030:CDS
CGAACATGGAAGCTGACACA+AGG 0.587043 6_3:-90044284 None:intergenic
TTGCCAAAACTGACAAAACA+TGG 0.587187 6_3:-90046028 None:intergenic
CAACACTGAGAAGCAATCCA+TGG 0.587739 6_3:+90045562 Msa0964030:CDS
AGAGAGCCATACACATATGC+CGG 0.588757 6_3:-90044597 None:intergenic
AACACCAAGCACACGAGCTG+GGG 0.589131 6_3:-90045202 None:intergenic
AGTTGTAGATGATTGGGAGA+AGG 0.591310 6_3:+90045887 Msa0964030:CDS
AATACCCCATTGCTCAGTCT+GGG 0.591811 6_3:-90046113 None:intergenic
GCACCACAAGTCTGTCCACA+TGG 0.594247 6_3:-90044559 None:intergenic
GCCGATAAATCAACTGAGGT+GGG 0.594419 6_3:-90043095 None:intergenic
CGCGGGTCCATGTCAACCAA+GGG 0.594623 6_3:-90045270 None:intergenic
TGTGCAACATACGTCTTCAA+AGG 0.595693 6_3:+90043163 Msa0964030:CDS
CAGGGATCATGTTTCTCAGA+GGG 0.596450 6_3:+90042713 Msa0964030:CDS
CCGCGGGTCCATGTCAACCA+AGG 0.596727 6_3:-90045271 None:intergenic
TGCTTGGGGAGGAACGAAAG+AGG 0.597959 6_3:+90045527 Msa0964030:CDS
TCTGAATTGCATCAAGAAGT+GGG 0.598520 6_3:+90043064 Msa0964030:CDS
CTGTTGTGGGAAAACAAAGT+TGG 0.599222 6_3:+90043766 Msa0964030:CDS
TTAGTACTTGGGAAAAGCAA+AGG 0.599353 6_3:+90045021 Msa0964030:CDS
GGAACATGTTGCTCATAGGA+TGG 0.600274 6_3:+90042689 Msa0964030:CDS
GGTGAATTTGAAGCAGAAGG+GGG 0.600465 6_3:+90043620 Msa0964030:CDS
AAGGTGGAGCCTTCTGCAGG+TGG 0.601388 6_3:+90045825 Msa0964030:CDS
ATTGTACCGCAAGGTAGGGG+AGG 0.601611 6_3:-90044256 None:intergenic
CGGGAAGCCTCTTGAAAAGG+AGG 0.601799 6_3:+90043271 Msa0964030:CDS
GGAGGAACGAAAGAGGGAGG+AGG 0.602030 6_3:+90045534 Msa0964030:CDS
ATTCCTCCTCCCCTACCTTG+CGG 0.603108 6_3:+90044250 Msa0964030:CDS
GTGAAGATTGTTTCAAGACA+AGG 0.603262 6_3:-90044196 None:intergenic
TGTAGGTTGGTCAACAGTTG+TGG 0.603427 6_3:-90042547 None:intergenic
CAGCGATGTCTCAACTAAGG+TGG 0.605037 6_3:+90045809 Msa0964030:CDS
TCTGCAGGTGGCGCAAATGG+AGG 0.605676 6_3:+90045837 Msa0964030:CDS
ATGGTGGACATTCCCCGACA+TGG 0.605753 6_3:-90043886 None:intergenic
CATTGCAAGACACAAGCATG+AGG 0.606756 6_3:-90043329 None:intergenic
AATGCAATAATCCCTGTGGA+AGG 0.606773 6_3:+90044446 Msa0964030:CDS
GTTTGTCATCCGGGAAGCTG+CGG 0.607050 6_3:+90043707 Msa0964030:CDS
TGTGGGGAGATGGCTATGAA+AGG 0.607727 6_3:+90043599 Msa0964030:CDS
GGGGAGGCAATATGGACCAA+GGG 0.608564 6_3:+90042905 Msa0964030:CDS
GACAGACTTGTGGTGCTCCA+AGG 0.608614 6_3:+90044566 Msa0964030:CDS
CAACTGGAGCAAGACCAGAT+AGG 0.609508 6_3:-90043026 None:intergenic
TAAGGAGACGTGCCATGTCG+GGG 0.611169 6_3:+90043874 Msa0964030:CDS
GAGCTGCAACTGCGATGAGG+AGG 0.612358 6_3:+90045424 Msa0964030:CDS
TATTTAACACCTCATTCGTG+TGG 0.616737 6_3:+90043239 Msa0964030:CDS
CAGCAAGACCCTTCGTTGTG+GGG 0.616822 6_3:+90043841 Msa0964030:CDS
CGCCAAGAATGGATTCCGAA+AGG 0.617456 6_3:+90042450 Msa0964030:CDS
TACTTGTCAAAAGCCGTGTG+GGG 0.620258 6_3:+90043997 Msa0964030:CDS
GGTGTTAAATACAAATCAGA+CGG 0.620364 6_3:-90043227 None:intergenic
ACTTGTGGTGCTCCAAGGAG+TGG 0.621111 6_3:+90044571 Msa0964030:CDS
TGCAACAAAGACGAGAAAGG+AGG 0.623384 6_3:+90042394 Msa0964030:CDS
GCAACAAAGACGAGAAAGGA+GGG 0.625819 6_3:+90042395 Msa0964030:CDS
ATGTTTCTCAGAGGGTGGAG+AGG 0.626512 6_3:+90042721 Msa0964030:CDS
AAGAATACTAATAATGATGG+TGG 0.626879 6_3:+90042588 Msa0964030:CDS
GGATCATGTTTCTCAGAGGG+TGG 0.627179 6_3:+90042716 Msa0964030:CDS
TTCTGCGAATATCCAACCAT+CGG 0.627235 6_3:+90045659 Msa0964030:CDS
ATGTTGCTCAGAGGGTGGAG+AGG 0.627374 6_3:+90042802 Msa0964030:CDS
CATTCGTGTGGCGAACCATG+CGG 0.627470 6_3:+90043251 Msa0964030:CDS
ACTTCGGTTACTAGTGCTTG+GGG 0.628795 6_3:+90045513 Msa0964030:CDS
CCACAAGGGCACAAACGAGG+AGG 0.629213 6_3:-90043389 None:intergenic
TTGTGGGAAAACAAAGTTGG+AGG 0.630286 6_3:+90043769 Msa0964030:CDS
GGAACATGTTGCTCAGAGGG+TGG 0.631552 6_3:+90042797 Msa0964030:CDS
GAAACGAGACAACAAGCCGC+GGG 0.631610 6_3:-90045287 None:intergenic
ATGTTGCTCATCGTGTGGAG+AGG 0.631919 6_3:+90042829 Msa0964030:CDS
GGAGAATTCACATCTTACAT+CGG 0.632388 6_3:-90044641 None:intergenic
TGGCTCAACTTCCAGAACTG+TGG 0.633025 6_3:+90043940 Msa0964030:CDS
CCTTGGTTGACATGGACCCG+CGG 0.634084 6_3:+90045271 Msa0964030:CDS
TGGGGAGGAACGAAAGAGGG+AGG 0.634097 6_3:+90045531 Msa0964030:CDS
TTCCCACAAGGGCACAAACG+AGG 0.634638 6_3:-90043392 None:intergenic
ATTCAGGAGAAGCTCACGAA+AGG 0.636122 6_3:+90042957 Msa0964030:CDS
TGTGAAAATGCATGCCATGT+GGG 0.636695 6_3:+90043506 Msa0964030:CDS
AAGACTTGGAGTGATGTCAA+AGG 0.637012 6_3:-90044896 None:intergenic
CACCTCAGTTGATTTATCGG+CGG 0.638209 6_3:+90043097 Msa0964030:CDS
GTTAAATACAAATCAGACGG+AGG 0.638266 6_3:-90043224 None:intergenic
TCACCATGTTGCTCATAGGG+TGG 0.640514 6_3:+90042662 Msa0964030:CDS
GTTTAGACGTGATCCAAAGT+GGG 0.640892 6_3:+90044969 Msa0964030:CDS
GCGATGAGGAGGTTGGATCA+CGG 0.643207 6_3:+90045435 Msa0964030:CDS
AAGCATGTACCCCACAACGA+AGG 0.643432 6_3:-90043850 None:intergenic
AATGTTCCTTGTGATGTTGG+TGG 0.643991 6_3:+90044700 Msa0964030:CDS
AAGATTGTTTCAAGACAAGG+TGG 0.645060 6_3:-90044193 None:intergenic
ACACAGGCACCGAACAAGGA+GGG 0.645071 6_3:-90044360 None:intergenic
AGGTTGGTCAACAGTTGTGG+TGG 0.645654 6_3:-90042544 None:intergenic
ACAAGAACAAGTAATTGTAA+CGG 0.646014 6_3:-90044662 None:intergenic
AGCACCTGACAAGGATCACA+AGG 0.646560 6_3:-90043530 None:intergenic
GATCACGGAACAGTTTATCA+GGG 0.646768 6_3:+90045450 Msa0964030:CDS
AAGGAACATTTGCTGATATG+CGG 0.647466 6_3:-90044687 None:intergenic
TTCCCGGATGACAAACCTCA+CGG 0.647838 6_3:-90043700 None:intergenic
TTACACGGAGGACATGGACC+CGG 0.648415 6_3:-90043356 None:intergenic
TGTGGGGCAAAGAAGAATTG+TGG 0.650171 6_3:+90044013 Msa0964030:CDS
GGAACATGTTGCTCATCGTG+TGG 0.651533 6_3:+90042824 Msa0964030:CDS
TTAATATTATTTGAGCCACA+AGG 0.651781 6_3:-90044424 None:intergenic
CATCGGGACAAGGACATCCA+GGG 0.652130 6_3:-90044624 None:intergenic
GGTTGGAAAGAAGATTCTTG+GGG 0.652331 6_3:+90045609 Msa0964030:CDS
GGAGGGGCAAATGCTTTACA+CGG 0.652619 6_3:-90043371 None:intergenic
GAACATGGAAGCTGACACAA+GGG 0.654287 6_3:-90044283 None:intergenic
TCACATCTTACATCGGGACA+AGG 0.654466 6_3:-90044634 None:intergenic
GATAAAGGATAAAAGAGATG+CGG 0.654783 6_3:+90045083 Msa0964030:CDS
TTTACTTGTCAAAAGCCGTG+TGG 0.654831 6_3:+90043995 Msa0964030:CDS
AGAATCTAGGGTTTAACTGG+CGG 0.656183 6_3:+90043123 Msa0964030:CDS
ACGGAGGACATGGACCCGGA+TGG 0.656337 6_3:-90043352 None:intergenic
GCGCCATGTGGACAGACTTG+TGG 0.657792 6_3:+90044556 Msa0964030:CDS
ACCAAGGGATCAAATGCAGT+AGG 0.658612 6_3:-90045255 None:intergenic
TCGGTTACTAGTGCTTGGGG+AGG 0.658781 6_3:+90045516 Msa0964030:CDS
ATTAAATGCAATAATCCCTG+TGG 0.660621 6_3:+90044442 Msa0964030:CDS
GGGCAAAGAAGAATTGTGGA+AGG 0.663235 6_3:+90044017 Msa0964030:CDS
TTATTACCACCAACATCACA+AGG 0.665046 6_3:-90044706 None:intergenic
TTATCATAGGACAAAAGACA+TGG 0.665931 6_3:-90045065 None:intergenic
ATTGCAAGACACAAGCATGA+GGG 0.666099 6_3:-90043328 None:intergenic
GGAAACGAGACAACAAGCCG+CGG 0.666131 6_3:-90045288 None:intergenic
AAAGGGAACATGTTGCTCAG+AGG 0.666302 6_3:+90042793 Msa0964030:CDS
CATTGTCTAGTCCTTCCACA+GGG 0.666428 6_3:-90044457 None:intergenic
GGGTAGAATATCACAAGGTG+GGG 0.668079 6_3:-90044512 None:intergenic
GGATGAACGCAAGAGTTGTG+TGG 0.668406 6_3:+90043790 Msa0964030:CDS
AAAGGTTTACGAGCGCCATG+TGG 0.672462 6_3:+90044544 Msa0964030:CDS
TGGGGAGGCAATATGGACCA+AGG 0.673331 6_3:+90042904 Msa0964030:CDS
GAAGCTCACGAAAGGTACTG+TGG 0.673659 6_3:+90042965 Msa0964030:CDS
AAGGGAGGCATTGTACCGCA+AGG 0.674284 6_3:-90044265 None:intergenic
ATTCTTAGGAACATACCTTG+TGG 0.675287 6_3:+90044409 Msa0964030:CDS
AAAAGCAAAGGAACTACACA+TGG 0.675412 6_3:+90045033 Msa0964030:CDS
TGTGGGAAGAAGCTGAGATG+TGG 0.675783 6_3:+90044130 Msa0964030:CDS
TGTTCGGTTCCTCAGCCGTG+TGG 0.676228 6_3:+90044301 Msa0964030:CDS
TTAAATACAAATCAGACGGA+GGG 0.678497 6_3:-90043223 None:intergenic
AAGGATCACAAGGACCCACA+TGG 0.679240 6_3:-90043520 None:intergenic
TTGAAAAGTAGACATGCATG+AGG 0.680292 6_3:+90045988 Msa0964030:three_prime_UTR
CTCCGCCGATAAATCAACTG+AGG 0.681469 6_3:-90043099 None:intergenic
ATTTCACAGAAATGTCGTTG+TGG 0.682580 6_3:+90043920 Msa0964030:CDS
CACAGCATGGAACAAAAGTG+AGG 0.684488 6_3:-90044109 None:intergenic
GACACAGGCACCGAACAAGG+AGG 0.685013 6_3:-90044361 None:intergenic
CCGGGTAGAATATCACAAGG+TGG 0.686630 6_3:-90044514 None:intergenic
CATGGAAGCTGACACAAGGG+AGG 0.688941 6_3:-90044280 None:intergenic
TGTTGCTCATAGGATGGACA+GGG 0.689012 6_3:+90042695 Msa0964030:CDS
ACAGGGATCATGTTTCTCAG+AGG 0.693591 6_3:+90042712 Msa0964030:CDS
AGATTGTTTCAAGACAAGGT+GGG 0.693635 6_3:-90044192 None:intergenic
TTTCCACCCTATGAGCAACA+TGG 0.694732 6_3:-90042665 None:intergenic
GGAACATGTTGCGCACAGGG+TGG 0.696437 6_3:+90042743 Msa0964030:CDS
TTGTGAAAATGCATGCCATG+TGG 0.696500 6_3:+90043505 Msa0964030:CDS
GTGTCAAAAGAATGTGTCGG+TGG 0.698247 6_3:+90044379 Msa0964030:CDS
GTTGCTCATAGGGTTGAAAG+GGG 0.699332 6_3:+90042858 Msa0964030:CDS
ACCACCGAATCTCAAAACCA+AGG 0.702952 6_3:-90045340 None:intergenic
AAGAAAACTGATGTGTGACG+AGG 0.703423 6_3:+90044834 Msa0964030:CDS
TGAGAGCCTGAATGGCCACA+CGG 0.707500 6_3:-90044316 None:intergenic
CAATGCGGTTTACATGCATG+TGG 0.711129 6_3:+90044475 Msa0964030:CDS
GTATGTTCCTAAGAATGACA+TGG 0.712888 6_3:-90044402 None:intergenic
CAGTAATCATATCTGCCGTG+AGG 0.721815 6_3:+90043685 Msa0964030:CDS
GAAATTAGGACCTTACATGG+TGG 0.726776 6_3:-90043902 None:intergenic
CCTGTGTCAAAAGAATGTGT+CGG 0.732184 6_3:+90044376 Msa0964030:CDS
CTTACCCAGACTGAGCAATG+GGG 0.759313 6_3:+90046109 Msa0964030:three_prime_UTR
ATACCGGGTAGAATATCACA+AGG 0.761810 6_3:-90044517 None:intergenic
TGTGAAACGTTGTGTCACAG+TGG 0.762278 6_3:+90044163 Msa0964030:CDS
GGGGCAAATGCTTTACACGG+AGG 0.770476 6_3:-90043368 None:intergenic
TGTGGAAGGACTAGACAATG+CGG 0.777229 6_3:+90044460 Msa0964030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACAATGAAATTGAAAATA+TGG + chr6_3:90041269-90041288 Msa0964030:intron 15.0%
!!! TAATTTATGGATTTTAGTTA+AGG + chr6_3:90041404-90041423 Msa0964030:intron 15.0%
!!! AATTTATGGATTTTAGTTAA+GGG + chr6_3:90041405-90041424 Msa0964030:intron 15.0%
!!! TTATTGTAGTTTTGATTTTT+TGG + chr6_3:90041843-90041862 Msa0964030:intron 15.0%
!!! TATTGTAGTTTTGATTTTTT+GGG + chr6_3:90041844-90041863 Msa0964030:intron 15.0%
!!! ATTGTTATAGTTTTGAATTT+TGG + chr6_3:90042077-90042096 Msa0964030:intron 15.0%
!!! TTGTTATAGTTTTGAATTTT+GGG + chr6_3:90042078-90042097 Msa0964030:intron 15.0%
!!! TGTTTTTGTGATGTAATTTA+TGG + chr6_3:90041391-90041410 Msa0964030:intron 20.0%
!!! ATTGTTGTAGTTTTGAATTT+AGG + chr6_3:90041507-90041526 Msa0964030:intron 20.0%
!!! TTGTTGTAGTTTTGAATTTA+GGG + chr6_3:90041508-90041527 Msa0964030:intron 20.0%
!!! TCTTTTTGTGTTTTTGTTTA+TGG + chr6_3:90041566-90041585 Msa0964030:intron 20.0%
!!! CTTTTTGTGTTTTTGTTTAT+GGG + chr6_3:90041567-90041586 Msa0964030:intron 20.0%
!!! TTTTTTGTTGTTAAGAATTG+AGG + chr6_3:90041593-90041612 Msa0964030:intron 20.0%
!!! TTTTTGTTGTTAAGAATTGA+GGG + chr6_3:90041594-90041613 Msa0964030:intron 20.0%
!!! TTGTTAAGAGTTTTGAATTT+TGG + chr6_3:90042189-90042208 Msa0964030:intron 20.0%
!!! TGTTAAGAGTTTTGAATTTT+GGG + chr6_3:90042190-90042209 Msa0964030:intron 20.0%
!!! ATTGTTAATGGTTTGAATTT+TGG + chr6_3:90042343-90042362 Msa0964030:intron 20.0%
!!! TTGTTAATGGTTTGAATTTT+GGG + chr6_3:90042344-90042363 Msa0964030:intron 20.0%
!!! TCTTTTTGTGTTTTTGTTTC+TGG + chr6_3:90041363-90041382 Msa0964030:intron 25.0%
!!! CTTTTTGTGTTTTTGTTTCT+GGG + chr6_3:90041364-90041383 Msa0964030:intron 25.0%
!!! TTTTGTTGTTAAGAATTGAG+GGG + chr6_3:90041595-90041614 Msa0964030:intron 25.0%
!!! TAGTTTTGATTTTTTGGGTT+GGG + chr6_3:90041849-90041868 Msa0964030:intron 25.0%
!!! ATGAGATTTTTTTGAGTGAT+TGG + chr6_3:90042038-90042057 Msa0964030:intron 25.0%
!! GTAGTTGAATATTGTGATTT+TGG + chr6_3:90042231-90042250 Msa0964030:intron 25.0%
! AAATCGAAAACTCAAAATCT+CGG - chr6_3:90042278-90042297 None:intergenic 25.0%
! ACAATGTAGCTTATTGTTAA+TGG + chr6_3:90042331-90042350 Msa0964030:intron 25.0%
! GAGAAGAATACTAATAATGA+TGG + chr6_3:90042585-90042604 Msa0964030:CDS 25.0%
! AAGAATACTAATAATGATGG+TGG + chr6_3:90042588-90042607 Msa0964030:CDS 25.0%
!!! ATTAAGTATGTTTGCTTTTG+TGG + chr6_3:90043188-90043207 Msa0964030:CDS 25.0%
!!! TTAAGTATGTTTGCTTTTGT+GGG + chr6_3:90043189-90043208 Msa0964030:CDS 25.0%
!! AATGTGAATTTTTACCAAGT+CGG + chr6_3:90043732-90043751 Msa0964030:CDS 25.0%
! TTAATATTATTTGAGCCACA+AGG - chr6_3:90044427-90044446 None:intergenic 25.0%
! ACAAGAACAAGTAATTGTAA+CGG - chr6_3:90044665-90044684 None:intergenic 25.0%
! AGATGCAAAATATTAGTACT+TGG + chr6_3:90045009-90045028 Msa0964030:CDS 25.0%
! GATGCAAAATATTAGTACTT+GGG + chr6_3:90045010-90045029 Msa0964030:CDS 25.0%
!! TCTCTTTTATCCTTTATCAT+AGG - chr6_3:90045081-90045100 None:intergenic 25.0%
! TTTAAGCATTTACCTAAATG+AGG - chr6_3:90046068-90046087 None:intergenic 25.0%
!! TTTTAGTTAAGGGAGAATTG+TGG + chr6_3:90041415-90041434 Msa0964030:intron 30.0%
TTTAGTTAAGGGAGAATTGT+GGG + chr6_3:90041416-90041435 Msa0964030:intron 30.0%
TTGAATTTAGGGAAGAAATG+AGG + chr6_3:90041519-90041538 Msa0964030:intron 30.0%
TGAATTTAGGGAAGAAATGA+GGG + chr6_3:90041520-90041539 Msa0964030:intron 30.0%
! TTGTTAGAGTTTTGCATTTC+TGG + chr6_3:90041718-90041737 Msa0964030:intron 30.0%
TGGGTAGTTGAATTAATTCA+TGG + chr6_3:90041756-90041775 Msa0964030:intron 30.0%
!!! GTAGTTTTGATTTTTTGGGT+TGG + chr6_3:90041848-90041867 Msa0964030:intron 30.0%
! TGTTGATTGAACTTATCGTT+AGG + chr6_3:90041948-90041967 Msa0964030:intron 30.0%
GTTGATTGAACTTATCGTTA+GGG + chr6_3:90041949-90041968 Msa0964030:intron 30.0%
!!! ATCGTTAGGGTTTTGAATTT+TGG + chr6_3:90041962-90041981 Msa0964030:intron 30.0%
!!! AGGGTTTTGAATTTTGGTTT+AGG + chr6_3:90041968-90041987 Msa0964030:intron 30.0%
! TTTGGTTTAGGTAAGAATTG+AGG + chr6_3:90041980-90041999 Msa0964030:intron 30.0%
TTGGTTTAGGTAAGAATTGA+GGG + chr6_3:90041981-90042000 Msa0964030:intron 30.0%
TGAGGGATAGTTTAATATTG+CGG + chr6_3:90041998-90042017 Msa0964030:intron 30.0%
!! TGAATTTTGGGAAGAAATGT+TGG + chr6_3:90042090-90042109 Msa0964030:intron 30.0%
!! GAATTTTGGGAAGAAATGTT+GGG + chr6_3:90042091-90042110 Msa0964030:intron 30.0%
!! GTGCATGATTTGTTATGATA+TGG + chr6_3:90042989-90043008 Msa0964030:CDS 30.0%
! TTTGTTATGATATGGTTCGT+AGG + chr6_3:90042997-90043016 Msa0964030:CDS 30.0%
TTAAATACAAATCAGACGGA+GGG - chr6_3:90043226-90043245 None:intergenic 30.0%
GGTGTTAAATACAAATCAGA+CGG - chr6_3:90043230-90043249 None:intergenic 30.0%
!!! ATGACACAGGTTATTTTTTG+TGG + chr6_3:90043581-90043600 Msa0964030:CDS 30.0%
!!! TGACACAGGTTATTTTTTGT+GGG + chr6_3:90043582-90043601 Msa0964030:CDS 30.0%
! ATGTGAATTTTTACCAAGTC+GGG + chr6_3:90043733-90043752 Msa0964030:CDS 30.0%
AACGACATTTCTGTGAAATT+AGG - chr6_3:90043919-90043938 None:intergenic 30.0%
! AAATAATGGTTTGACTAGTC+CGG + chr6_3:90044078-90044097 Msa0964030:CDS 30.0%
ATTAAATGCAATAATCCCTG+TGG + chr6_3:90044442-90044461 Msa0964030:CDS 30.0%
GTTACAATTACTTGTTCTTG+TGG + chr6_3:90044664-90044683 Msa0964030:CDS 30.0%
TTATCATAGGACAAAAGACA+TGG - chr6_3:90045068-90045087 None:intergenic 30.0%
! TGTCTTTTGTCCTATGATAA+AGG + chr6_3:90045068-90045087 Msa0964030:CDS 30.0%
GATAAAGGATAAAAGAGATG+CGG + chr6_3:90045083-90045102 Msa0964030:CDS 30.0%
GAAATTACGATGAATCTCTT+TGG - chr6_3:90045162-90045181 None:intergenic 30.0%
!! TGACGTTATTTTCCTCATTT+AGG + chr6_3:90046053-90046072 Msa0964030:three_prime_UTR 30.0%
GCTTAAAAGTTCAAACTCAT+TGG + chr6_3:90046081-90046100 Msa0964030:three_prime_UTR 30.0%
! AGGGAAAAAATGCATTTTGT+TGG + chr6_3:90046143-90046162 Msa0964030:three_prime_UTR 30.0%
CTCTTGTGACACAAACATAA+AGG + chr6_3:90041072-90041091 Msa0964030:five_prime_UTR 35.0%
GAATTGAGAAACAAGCAGTT+TGG - chr6_3:90041191-90041210 None:intergenic 35.0%
TTAGTTAAGGGAGAATTGTG+GGG + chr6_3:90041417-90041436 Msa0964030:intron 35.0%
TGAAGGGTAGTTGAATATTG+TGG + chr6_3:90041879-90041898 Msa0964030:intron 35.0%
! TGTTGGGTAGTTGAATTTTG+TGG + chr6_3:90042107-90042126 Msa0964030:intron 35.0%
!! TTTGAATTTTGGGTGCAGAA+GGG + chr6_3:90042354-90042373 Msa0964030:intron 35.0%
TAATCACCATGTTGCTCATA+GGG + chr6_3:90042659-90042678 Msa0964030:CDS 35.0%
ATGAAAGATAGAGTAGCAAC+TGG - chr6_3:90043045-90043064 None:intergenic 35.0%
ATCTGAATTGCATCAAGAAG+TGG + chr6_3:90043063-90043082 Msa0964030:CDS 35.0%
TCTGAATTGCATCAAGAAGT+GGG + chr6_3:90043064-90043083 Msa0964030:CDS 35.0%
! AGAAGAATCTAGGGTTTAAC+TGG + chr6_3:90043120-90043139 Msa0964030:CDS 35.0%
GTTAAATACAAATCAGACGG+AGG - chr6_3:90043227-90043246 None:intergenic 35.0%
TATTTAACACCTCATTCGTG+TGG + chr6_3:90043239-90043258 Msa0964030:CDS 35.0%
! GTTTGTTACTGAAGAGAGAA+AGG + chr6_3:90043295-90043314 Msa0964030:CDS 35.0%
! CAATTCTTTTCTTCCCACAA+GGG - chr6_3:90043406-90043425 None:intergenic 35.0%
TGTGATAAGCTTCTTGATTG+TGG + chr6_3:90043473-90043492 Msa0964030:CDS 35.0%
! CATTTTACTGCAAAAGCAAG+AGG - chr6_3:90043564-90043583 None:intergenic 35.0%
! CTTTTGCAGTAAAATGACAC+AGG + chr6_3:90043568-90043587 Msa0964030:CDS 35.0%
!!! GACACAGGTTATTTTTTGTG+GGG + chr6_3:90043583-90043602 Msa0964030:CDS 35.0%
! AAAGGTGAATTTGAAGCAGA+AGG + chr6_3:90043617-90043636 Msa0964030:CDS 35.0%
! AAGGTGAATTTGAAGCAGAA+GGG + chr6_3:90043618-90043637 Msa0964030:CDS 35.0%
! TTTTCTTGTGGTTCCAATTG+TGG + chr6_3:90043647-90043666 Msa0964030:CDS 35.0%
TGTGAAATTAGGACCTTACA+TGG - chr6_3:90043908-90043927 None:intergenic 35.0%
ATTTCACAGAAATGTCGTTG+TGG + chr6_3:90043920-90043939 Msa0964030:CDS 35.0%
TTTATAGCATTCCACAGTTC+TGG - chr6_3:90043954-90043973 None:intergenic 35.0%
! GACAACACTTTTCACTACAT+CGG - chr6_3:90044045-90044064 None:intergenic 35.0%
!! GGACTAGTCAAACCATTATT+TGG - chr6_3:90044079-90044098 None:intergenic 35.0%
AGATTGTTTCAAGACAAGGT+GGG - chr6_3:90044195-90044214 None:intergenic 35.0%
AAGATTGTTTCAAGACAAGG+TGG - chr6_3:90044196-90044215 None:intergenic 35.0%
GTGAAGATTGTTTCAAGACA+AGG - chr6_3:90044199-90044218 None:intergenic 35.0%
GTATGTTCCTAAGAATGACA+TGG - chr6_3:90044405-90044424 None:intergenic 35.0%
ATTCTTAGGAACATACCTTG+TGG + chr6_3:90044409-90044428 Msa0964030:CDS 35.0%
TCGTAAACCTTTCACAATAC+CGG - chr6_3:90044536-90044555 None:intergenic 35.0%
GAGAATTCACATCTTACATC+GGG - chr6_3:90044643-90044662 None:intergenic 35.0%
GGAGAATTCACATCTTACAT+CGG - chr6_3:90044644-90044663 None:intergenic 35.0%
! AAGGAACATTTGCTGATATG+CGG - chr6_3:90044690-90044709 None:intergenic 35.0%
TTATTACCACCAACATCACA+AGG - chr6_3:90044709-90044728 None:intergenic 35.0%
! TTTGTCCAAGAGGAACTTTT+TGG - chr6_3:90044816-90044835 None:intergenic 35.0%
! ATCAGTTTTCTTTGTCCAAG+AGG - chr6_3:90044826-90044845 None:intergenic 35.0%
AAGAAGAATTCTCACCGAAA+TGG - chr6_3:90044930-90044949 None:intergenic 35.0%
TTAGTACTTGGGAAAAGCAA+AGG + chr6_3:90045021-90045040 Msa0964030:CDS 35.0%
AAAAGCAAAGGAACTACACA+TGG + chr6_3:90045033-90045052 Msa0964030:CDS 35.0%
TGAGAATGATTGCTGAAAGA+TGG + chr6_3:90045106-90045125 Msa0964030:CDS 35.0%
AAGAATCTTCTTTCCAACCT+GGG - chr6_3:90045608-90045627 None:intergenic 35.0%
AGGTTGGAAAGAAGATTCTT+GGG + chr6_3:90045608-90045627 Msa0964030:CDS 35.0%
TCATGATTCAGAACATTCCA+AGG - chr6_3:90045723-90045742 None:intergenic 35.0%
TGCTGAAGTTGTAGATGATT+GGG + chr6_3:90045881-90045900 Msa0964030:CDS 35.0%
TTGAAAAGTAGACATGCATG+AGG + chr6_3:90045988-90046007 Msa0964030:three_prime_UTR 35.0%
! TTGCCATGTTTTGTCAGTTT+TGG + chr6_3:90046025-90046044 Msa0964030:three_prime_UTR 35.0%
TTGCCAAAACTGACAAAACA+TGG - chr6_3:90046031-90046050 None:intergenic 35.0%
! CAATGGGGTATTTGACTAAA+GGG + chr6_3:90046124-90046143 Msa0964030:three_prime_UTR 35.0%
ATAGATACCTTGACGAGAAG+AGG - chr6_3:90041218-90041237 None:intergenic 40.0%
TGTGGGGTAGTTGAATATTG+TGG + chr6_3:90041433-90041452 Msa0964030:intron 40.0%
TGAGGGGTAGTTGAATATTG+TGG + chr6_3:90041611-90041630 Msa0964030:intron 40.0%
!!! AGAGTTTTGCATTTCTGGTC+AGG + chr6_3:90041723-90041742 Msa0964030:intron 40.0%
!!! GAGTTTTGCATTTCTGGTCA+GGG + chr6_3:90041724-90041743 Msa0964030:intron 40.0%
!! TTGGGTTGGGAAAGAATTGA+AGG + chr6_3:90041862-90041881 Msa0964030:intron 40.0%
! TGGGTTGGGAAAGAATTGAA+GGG + chr6_3:90041863-90041882 Msa0964030:intron 40.0%
! TGGGTTAGAGAACAATTGAG+TGG + chr6_3:90042209-90042228 Msa0964030:intron 40.0%
!! GTTTGAATTTTGGGTGCAGA+AGG + chr6_3:90042353-90042372 Msa0964030:intron 40.0%
! TCATGAGAGTGCAAACTTGT+AGG - chr6_3:90042567-90042586 None:intergenic 40.0%
CTTCTATGCCTAGCAAATGT+TGG - chr6_3:90042639-90042658 None:intergenic 40.0%
GTAATCACCATGTTGCTCAT+AGG + chr6_3:90042658-90042677 Msa0964030:CDS 40.0%
AAAGGGAACATGTTGCTCAT+AGG + chr6_3:90042685-90042704 Msa0964030:CDS 40.0%
ATGTTGCTCATAGGGTTGAA+AGG + chr6_3:90042856-90042875 Msa0964030:CDS 40.0%
TGTTGCTCATAGGGTTGAAA+GGG + chr6_3:90042857-90042876 Msa0964030:CDS 40.0%
TGAATCTCCTGCACTAATTG+AGG - chr6_3:90042942-90042961 None:intergenic 40.0%
TCAATTAGTGCAGGAGATTC+AGG + chr6_3:90042941-90042960 Msa0964030:CDS 40.0%
! ACCCACCTCAGTTGATTTAT+CGG + chr6_3:90043094-90043113 Msa0964030:CDS 40.0%
! AGAATCTAGGGTTTAACTGG+CGG + chr6_3:90043123-90043142 Msa0964030:CDS 40.0%
TGTGCAACATACGTCTTCAA+AGG + chr6_3:90043163-90043182 Msa0964030:CDS 40.0%
!! ATGTTTGCTTTTGTGGGAAG+AGG + chr6_3:90043195-90043214 Msa0964030:CDS 40.0%
!! TGTTTGCTTTTGTGGGAAGA+GGG + chr6_3:90043196-90043215 Msa0964030:CDS 40.0%
!! ACAAACACCTCCTTTTCAAG+AGG - chr6_3:90043281-90043300 None:intergenic 40.0%
ATTGCAAGACACAAGCATGA+GGG - chr6_3:90043331-90043350 None:intergenic 40.0%
! GCAATTCTTTTCTTCCCACA+AGG - chr6_3:90043407-90043426 None:intergenic 40.0%
TTGTGAAAATGCATGCCATG+TGG + chr6_3:90043505-90043524 Msa0964030:CDS 40.0%
TGTGAAAATGCATGCCATGT+GGG + chr6_3:90043506-90043525 Msa0964030:CDS 40.0%
!!! GGTTATTTTTTGTGGGGAGA+TGG + chr6_3:90043589-90043608 Msa0964030:CDS 40.0%
! AGGTGAATTTGAAGCAGAAG+GGG + chr6_3:90043619-90043638 Msa0964030:CDS 40.0%
TCCAATTGTGGAAATGTGCT+TGG + chr6_3:90043659-90043678 Msa0964030:CDS 40.0%
CTGTTGTGGGAAAACAAAGT+TGG + chr6_3:90043766-90043785 Msa0964030:CDS 40.0%
TTGTGGGAAAACAAAGTTGG+AGG + chr6_3:90043769-90043788 Msa0964030:CDS 40.0%
! ACTTTTGAGCAGGTAGGAAT+TGG - chr6_3:90043818-90043837 None:intergenic 40.0%
GAAATTAGGACCTTACATGG+TGG - chr6_3:90043905-90043924 None:intergenic 40.0%
TTTACTTGTCAAAAGCCGTG+TGG + chr6_3:90043995-90044014 Msa0964030:CDS 40.0%
TTACTTGTCAAAAGCCGTGT+GGG + chr6_3:90043996-90044015 Msa0964030:CDS 40.0%
!! GAAAAGTGTTGTCCATTGTC+TGG + chr6_3:90044052-90044071 Msa0964030:CDS 40.0%
CCATTATTTGGACCAGACAA+TGG - chr6_3:90044067-90044086 None:intergenic 40.0%
CCATTGTCTGGTCCAAATAA+TGG + chr6_3:90044064-90044083 Msa0964030:CDS 40.0%
! ACTTTTGTTCCATGCTGTGT+GGG + chr6_3:90044113-90044132 Msa0964030:CDS 40.0%
! ACTGATTTAGCATGTGCTTG+TGG + chr6_3:90044217-90044236 Msa0964030:CDS 40.0%
CCTGTGTCAAAAGAATGTGT+CGG + chr6_3:90044376-90044395 Msa0964030:CDS 40.0%
AATGCAATAATCCCTGTGGA+AGG + chr6_3:90044446-90044465 Msa0964030:CDS 40.0%
ATACCGGGTAGAATATCACA+AGG - chr6_3:90044520-90044539 None:intergenic 40.0%
ATTCTACCCGGTATTGTGAA+AGG + chr6_3:90044526-90044545 Msa0964030:CDS 40.0%
CGTAAACCTTTCACAATACC+GGG - chr6_3:90044535-90044554 None:intergenic 40.0%
GCAAATGTTCCTTGTGATGT+TGG + chr6_3:90044697-90044716 Msa0964030:CDS 40.0%
AATGTTCCTTGTGATGTTGG+TGG + chr6_3:90044700-90044719 Msa0964030:CDS 40.0%
TTTGCATCAACTGGTTGAAG+AGG - chr6_3:90044790-90044809 None:intergenic 40.0%
! CTTCAACCAGTTGATGCAAA+TGG + chr6_3:90044790-90044809 Msa0964030:CDS 40.0%
! TTTTGGCCATTTGCATCAAC+TGG - chr6_3:90044799-90044818 None:intergenic 40.0%
AATGGCCAAAAAGTTCCTCT+TGG + chr6_3:90044808-90044827 Msa0964030:CDS 40.0%
AAGAAAACTGATGTGTGACG+AGG + chr6_3:90044834-90044853 Msa0964030:CDS 40.0%
! TGCTAAGTTGGAGCGTAAAA+GGG + chr6_3:90044861-90044880 Msa0964030:CDS 40.0%
AAGACTTGGAGTGATGTCAA+AGG - chr6_3:90044899-90044918 None:intergenic 40.0%
!! AAATGGAGAGCATCAAGACT+TGG - chr6_3:90044913-90044932 None:intergenic 40.0%
AGTCTTGATGCTCTCCATTT+CGG + chr6_3:90044913-90044932 Msa0964030:CDS 40.0%
GTTTAGACGTGATCCAAAGT+GGG + chr6_3:90044969-90044988 Msa0964030:CDS 40.0%
TCAATAGCCAAAACCCACTT+TGG - chr6_3:90044985-90045004 None:intergenic 40.0%
!!! AAAGTGGGTTTTGGCTATTG+AGG + chr6_3:90044984-90045003 Msa0964030:CDS 40.0%
!! TGGGGTCTTAGATTTTTGAG+TGG - chr6_3:90045187-90045206 None:intergenic 40.0%
ATTTGATCCCTTGGTTGACA+TGG + chr6_3:90045263-90045282 Msa0964030:CDS 40.0%
!!! AGTGCCTTGGTTTTGAGATT+CGG + chr6_3:90045336-90045355 Msa0964030:CDS 40.0%
GATCACGGAACAGTTTATCA+GGG + chr6_3:90045450-90045469 Msa0964030:CDS 40.0%
GAGAAGCAATCCATGGAAAA+AGG + chr6_3:90045569-90045588 Msa0964030:CDS 40.0%
CAAGAATCTTCTTTCCAACC+TGG - chr6_3:90045609-90045628 None:intergenic 40.0%
! CAGGTTGGAAAGAAGATTCT+TGG + chr6_3:90045607-90045626 Msa0964030:CDS 40.0%
GGTTGGAAAGAAGATTCTTG+GGG + chr6_3:90045609-90045628 Msa0964030:CDS 40.0%
TTGGATATTCGCAGAATCAC+CGG - chr6_3:90045655-90045674 None:intergenic 40.0%
TTCTGCGAATATCCAACCAT+CGG + chr6_3:90045659-90045678 Msa0964030:CDS 40.0%
GGATTCAATGAAGCAGGTAT+TGG - chr6_3:90045702-90045721 None:intergenic 40.0%
TACCTGCTTCATTGAATCCT+TGG + chr6_3:90045703-90045722 Msa0964030:CDS 40.0%
TTCCAAGGATTCAATGAAGC+AGG - chr6_3:90045708-90045727 None:intergenic 40.0%
! ATCGAGTTCGAGTTCATCAT+CGG + chr6_3:90045743-90045762 Msa0964030:CDS 40.0%
! GTCATAAGAAGTGTAGCTTC+TGG + chr6_3:90045771-90045790 Msa0964030:CDS 40.0%
CTGCTGAAGTTGTAGATGAT+TGG + chr6_3:90045880-90045899 Msa0964030:CDS 40.0%
AGTTGTAGATGATTGGGAGA+AGG + chr6_3:90045887-90045906 Msa0964030:CDS 40.0%
GTAGACATGCATGAGGTTTA+TGG + chr6_3:90045995-90046014 Msa0964030:three_prime_UTR 40.0%
! GCAATGGGGTATTTGACTAA+AGG + chr6_3:90046123-90046142 Msa0964030:three_prime_UTR 40.0%
TTCTCTTCCTCTTCTCGTCA+AGG + chr6_3:90041208-90041227 Msa0964030:five_prime_UTR 45.0%
!! TTTGCATTTCTGGTCAGGGA+AGG + chr6_3:90041728-90041747 Msa0964030:intron 45.0%
GTGTGTGTGACTTTGAGTGT+TGG + chr6_3:90041805-90041824 Msa0964030:intron 45.0%
GCTTGCAACAAAGACGAGAA+AGG + chr6_3:90042391-90042410 Msa0964030:CDS 45.0%
TGCAACAAAGACGAGAAAGG+AGG + chr6_3:90042394-90042413 Msa0964030:CDS 45.0%
GCAACAAAGACGAGAAAGGA+GGG + chr6_3:90042395-90042414 Msa0964030:CDS 45.0%
AAAGACGAGAAAGGAGGGAA+GGG + chr6_3:90042400-90042419 Msa0964030:CDS 45.0%
!! TGTAGGTTGGTCAACAGTTG+TGG - chr6_3:90042550-90042569 None:intergenic 45.0%
! GAGAGTGCAAACTTGTAGGT+TGG - chr6_3:90042563-90042582 None:intergenic 45.0%
! GATGGTGGTTCATCCAATCA+AGG + chr6_3:90042603-90042622 Msa0964030:CDS 45.0%
CTGTTGCTCCAACATTTGCT+AGG + chr6_3:90042628-90042647 Msa0964030:CDS 45.0%
TTTCCACCCTATGAGCAACA+TGG - chr6_3:90042668-90042687 None:intergenic 45.0%
ATGTTGCTCATAGGGTGGAA+AGG + chr6_3:90042667-90042686 Msa0964030:CDS 45.0%
TGTTGCTCATAGGGTGGAAA+GGG + chr6_3:90042668-90042687 Msa0964030:CDS 45.0%
GGAACATGTTGCTCATAGGA+TGG + chr6_3:90042689-90042708 Msa0964030:CDS 45.0%
ATGTTGCTCATAGGATGGAC+AGG + chr6_3:90042694-90042713 Msa0964030:CDS 45.0%
TGTTGCTCATAGGATGGACA+GGG + chr6_3:90042695-90042714 Msa0964030:CDS 45.0%
ACAGGGATCATGTTTCTCAG+AGG + chr6_3:90042712-90042731 Msa0964030:CDS 45.0%
CAGGGATCATGTTTCTCAGA+GGG + chr6_3:90042713-90042732 Msa0964030:CDS 45.0%
AAAGGGAACATGTTGCTCAG+AGG + chr6_3:90042793-90042812 Msa0964030:CDS 45.0%
AAGGGAACATGTTGCTCAGA+GGG + chr6_3:90042794-90042813 Msa0964030:CDS 45.0%
AGAGGGAACATGTTGCTCAT+AGG + chr6_3:90042820-90042839 Msa0964030:CDS 45.0%
GAGGGAACATGTTGCTCATA+GGG + chr6_3:90042848-90042867 Msa0964030:CDS 45.0%
GTTGCTCATAGGGTTGAAAG+GGG + chr6_3:90042858-90042877 Msa0964030:CDS 45.0%
ATAGGGTTGAAAGGGGTAGA+GGG + chr6_3:90042865-90042884 Msa0964030:CDS 45.0%
! AATATGGTGGGGAGGCAATA+TGG + chr6_3:90042897-90042916 Msa0964030:CDS 45.0%
! TAGCTTGCCTCAATTAGTGC+AGG + chr6_3:90042932-90042951 Msa0964030:CDS 45.0%
ATTCAGGAGAAGCTCACGAA+AGG + chr6_3:90042957-90042976 Msa0964030:CDS 45.0%
GCCGATAAATCAACTGAGGT+GGG - chr6_3:90043098-90043117 None:intergenic 45.0%
! CACCTCAGTTGATTTATCGG+CGG + chr6_3:90043097-90043116 Msa0964030:CDS 45.0%
TTATCGGCGGAGAAGAATCT+AGG + chr6_3:90043110-90043129 Msa0964030:CDS 45.0%
TATCGGCGGAGAAGAATCTA+GGG + chr6_3:90043111-90043130 Msa0964030:CDS 45.0%
CATTGCAAGACACAAGCATG+AGG - chr6_3:90043332-90043351 None:intergenic 45.0%
TTGTGTCTTGCAATGCCATC+CGG + chr6_3:90043337-90043356 Msa0964030:CDS 45.0%
AATGCTTTACACGGAGGACA+TGG - chr6_3:90043365-90043384 None:intergenic 45.0%
TTGCTACTCGCTGTTCTGAT+CGG + chr6_3:90043423-90043442 Msa0964030:CDS 45.0%
TCCTTGTCAGGTGCTAATTG+AGG + chr6_3:90043538-90043557 Msa0964030:CDS 45.0%
! GGTGAATTTGAAGCAGAAGG+GGG + chr6_3:90043620-90043639 Msa0964030:CDS 45.0%
!!! GAAGGGGGAGTTTTTTCTTG+TGG + chr6_3:90043635-90043654 Msa0964030:CDS 45.0%
GCCAAGCACATTTCCACAAT+TGG - chr6_3:90043663-90043682 None:intergenic 45.0%
CAGTAATCATATCTGCCGTG+AGG + chr6_3:90043685-90043704 Msa0964030:CDS 45.0%
! CTGCATACTTTTGAGCAGGT+AGG - chr6_3:90043824-90043843 None:intergenic 45.0%
! CTTGCTGCATACTTTTGAGC+AGG - chr6_3:90043828-90043847 None:intergenic 45.0%
TTGTGGGGTACATGCTTGTA+AGG + chr6_3:90043856-90043875 Msa0964030:CDS 45.0%
TACTTGTCAAAAGCCGTGTG+GGG + chr6_3:90043997-90044016 Msa0964030:CDS 45.0%
CAATTCTTCTTTGCCCCACA+CGG - chr6_3:90044013-90044032 None:intergenic 45.0%
TGTGGGGCAAAGAAGAATTG+TGG + chr6_3:90044013-90044032 Msa0964030:CDS 45.0%
GGGCAAAGAAGAATTGTGGA+AGG + chr6_3:90044017-90044036 Msa0964030:CDS 45.0%
! ATGGTTTGACTAGTCCGGAT+TGG + chr6_3:90044083-90044102 Msa0964030:CDS 45.0%
! TGGTTTGACTAGTCCGGATT+GGG + chr6_3:90044084-90044103 Msa0964030:CDS 45.0%
CAAAAGTGAGGATCCCAATC+CGG - chr6_3:90044100-90044119 None:intergenic 45.0%
CACAGCATGGAACAAAAGTG+AGG - chr6_3:90044112-90044131 None:intergenic 45.0%
! CACTTTTGTTCCATGCTGTG+TGG + chr6_3:90044112-90044131 Msa0964030:CDS 45.0%
ACAACGTTTCACACACATGC+TGG - chr6_3:90044156-90044175 None:intergenic 45.0%
TGTGAAACGTTGTGTCACAG+TGG + chr6_3:90044163-90044182 Msa0964030:CDS 45.0%
GAACATGGAAGCTGACACAA+GGG - chr6_3:90044286-90044305 None:intergenic 45.0%
CTTGTGTCAGCTTCCATGTT+CGG + chr6_3:90044285-90044304 Msa0964030:CDS 45.0%
! CCGACACATTCTTTTGACAC+AGG - chr6_3:90044379-90044398 None:intergenic 45.0%
GTGTCAAAAGAATGTGTCGG+TGG + chr6_3:90044379-90044398 Msa0964030:CDS 45.0%
CATTGTCTAGTCCTTCCACA+GGG - chr6_3:90044460-90044479 None:intergenic 45.0%
TGTGGAAGGACTAGACAATG+CGG + chr6_3:90044460-90044479 Msa0964030:CDS 45.0%
CAATGCGGTTTACATGCATG+TGG + chr6_3:90044475-90044494 Msa0964030:CDS 45.0%
GGGTAGAATATCACAAGGTG+GGG - chr6_3:90044515-90044534 None:intergenic 45.0%
CGGGTAGAATATCACAAGGT+GGG - chr6_3:90044516-90044535 None:intergenic 45.0%
CCACCTTGTGATATTCTACC+CGG + chr6_3:90044514-90044533 Msa0964030:CDS 45.0%
AGAGAGCCATACACATATGC+CGG - chr6_3:90044600-90044619 None:intergenic 45.0%
TCACATCTTACATCGGGACA+AGG - chr6_3:90044637-90044656 None:intergenic 45.0%
! TCAACTGGTTGAAGAGGCAT+GGG - chr6_3:90044784-90044803 None:intergenic 45.0%
ATCAACTGGTTGAAGAGGCA+TGG - chr6_3:90044785-90044804 None:intergenic 45.0%
TGACGAGGAATGTGCTAAGT+TGG + chr6_3:90044849-90044868 Msa0964030:CDS 45.0%
! GTGCTAAGTTGGAGCGTAAA+AGG + chr6_3:90044860-90044879 Msa0964030:CDS 45.0%
CGTTTAGACGTGATCCAAAG+TGG + chr6_3:90044968-90044987 Msa0964030:CDS 45.0%
!! ACGTGATCCAAAGTGGGTTT+TGG + chr6_3:90044975-90044994 Msa0964030:CDS 45.0%
GGATCAAATGCAGTAGGAAG+CGG - chr6_3:90045252-90045271 None:intergenic 45.0%
TCCTACTGCATTTGATCCCT+TGG + chr6_3:90045254-90045273 Msa0964030:CDS 45.0%
ACCAAGGGATCAAATGCAGT+AGG - chr6_3:90045258-90045277 None:intergenic 45.0%
ACCACCGAATCTCAAAACCA+AGG - chr6_3:90045343-90045362 None:intergenic 45.0%
! GTGGTGAATGTGAGCTTGTT+TGG + chr6_3:90045358-90045377 Msa0964030:CDS 45.0%
! AGCTTGTTTGGTTGAACGAC+AGG + chr6_3:90045370-90045389 Msa0964030:CDS 45.0%
GTTGAACGACAGGAATGCTT+TGG + chr6_3:90045380-90045399 Msa0964030:CDS 45.0%
GGATCACGGAACAGTTTATC+AGG + chr6_3:90045449-90045468 Msa0964030:CDS 45.0%
GTTTCGTTTGTCCAGAATGC+TGG + chr6_3:90045477-90045496 Msa0964030:CDS 45.0%
GACTTCGGTTACTAGTGCTT+GGG + chr6_3:90045512-90045531 Msa0964030:CDS 45.0%
ACTTCGGTTACTAGTGCTTG+GGG + chr6_3:90045513-90045532 Msa0964030:CDS 45.0%
CAATCCATGGAAAAAGGCAG+CGG + chr6_3:90045575-90045594 Msa0964030:CDS 45.0%
ATTCTTGGGGCGATGAACAA+TGG + chr6_3:90045622-90045641 Msa0964030:CDS 45.0%
GATGAACAATGGACCACTAC+CGG + chr6_3:90045633-90045652 Msa0964030:CDS 45.0%
CTTTCTTCAGAACCGATGGT+TGG - chr6_3:90045674-90045693 None:intergenic 45.0%
GCTTCTTTCTTCAGAACCGA+TGG - chr6_3:90045678-90045697 None:intergenic 45.0%
AAGCAGCGATGTCTCAACTA+AGG + chr6_3:90045806-90045825 Msa0964030:CDS 45.0%
TCTTACCCAGACTGAGCAAT+GGG + chr6_3:90046108-90046127 Msa0964030:three_prime_UTR 45.0%
AATACCCCATTGCTCAGTCT+GGG - chr6_3:90046116-90046135 None:intergenic 45.0%
AAATACCCCATTGCTCAGTC+TGG - chr6_3:90046117-90046136 None:intergenic 45.0%
!!! TTTTTTTTATTTTTATTTTG+AGG + chr6_3:90042307-90042326 Msa0964030:intron 5.0%
TCTGGTCAGGGAAGGATTGA+TGG + chr6_3:90041736-90041755 Msa0964030:intron 50.0%
CTGGTCAGGGAAGGATTGAT+GGG + chr6_3:90041737-90041756 Msa0964030:intron 50.0%
TTTGGGTGCAGAAGGGACAT+TGG + chr6_3:90042361-90042380 Msa0964030:intron 50.0%
CAAAGACGAGAAAGGAGGGA+AGG + chr6_3:90042399-90042418 Msa0964030:CDS 50.0%
TTCGGAATCCATTCTTGGCG+AGG - chr6_3:90042450-90042469 None:intergenic 50.0%
! CGCCAAGAATGGATTCCGAA+AGG + chr6_3:90042450-90042469 Msa0964030:CDS 50.0%
CGCCTTTCGGAATCCATTCT+TGG - chr6_3:90042455-90042474 None:intergenic 50.0%
TTGGTCAACAGTTGTGGTGG+TGG - chr6_3:90042544-90042563 None:intergenic 50.0%
! AGGTTGGTCAACAGTTGTGG+TGG - chr6_3:90042547-90042566 None:intergenic 50.0%
TGGAGCAACAGCTCCTTGAT+TGG - chr6_3:90042619-90042638 None:intergenic 50.0%
TCACCATGTTGCTCATAGGG+TGG + chr6_3:90042662-90042681 Msa0964030:CDS 50.0%
GGATCATGTTTCTCAGAGGG+TGG + chr6_3:90042716-90042735 Msa0964030:CDS 50.0%
ATGTTTCTCAGAGGGTGGAG+AGG + chr6_3:90042721-90042740 Msa0964030:CDS 50.0%
TGTTTCTCAGAGGGTGGAGA+GGG + chr6_3:90042722-90042741 Msa0964030:CDS 50.0%
ATGCTGCTCATCGCGTTGAA+AGG + chr6_3:90042775-90042794 Msa0964030:CDS 50.0%
TGCTGCTCATCGCGTTGAAA+GGG + chr6_3:90042776-90042795 Msa0964030:CDS 50.0%
GGAACATGTTGCTCATCGTG+TGG + chr6_3:90042824-90042843 Msa0964030:CDS 50.0%
ATGTTGCTCATCGTGTGGAG+AGG + chr6_3:90042829-90042848 Msa0964030:CDS 50.0%
TGTTGCTCATCGTGTGGAGA+GGG + chr6_3:90042830-90042849 Msa0964030:CDS 50.0%
CATAGGGTTGAAAGGGGTAG+AGG + chr6_3:90042864-90042883 Msa0964030:CDS 50.0%
TAGAGGGAGGAGTGGGAATA+TGG + chr6_3:90042881-90042900 Msa0964030:CDS 50.0%
!! GAAGCTCACGAAAGGTACTG+TGG + chr6_3:90042965-90042984 Msa0964030:CDS 50.0%
CAACTGGAGCAAGACCAGAT+AGG - chr6_3:90043029-90043048 None:intergenic 50.0%
CGCCGATAAATCAACTGAGG+TGG - chr6_3:90043099-90043118 None:intergenic 50.0%
CTCCGCCGATAAATCAACTG+AGG - chr6_3:90043102-90043121 None:intergenic 50.0%
TGTTGCACAGACTGACAACC+AGG - chr6_3:90043152-90043171 None:intergenic 50.0%
!! TTTTCAAGAGGCTTCCCGCA+TGG - chr6_3:90043269-90043288 None:intergenic 50.0%
ATGCGGGAAGCCTCTTGAAA+AGG + chr6_3:90043268-90043287 Msa0964030:CDS 50.0%
TGTGTCTTGCAATGCCATCC+GGG + chr6_3:90043338-90043357 Msa0964030:CDS 50.0%
GGAGGGGCAAATGCTTTACA+CGG - chr6_3:90043374-90043393 None:intergenic 50.0%
AAGGATCACAAGGACCCACA+TGG - chr6_3:90043523-90043542 None:intergenic 50.0%
AGCACCTGACAAGGATCACA+AGG - chr6_3:90043533-90043552 None:intergenic 50.0%
GCCTCAATTAGCACCTGACA+AGG - chr6_3:90043542-90043561 None:intergenic 50.0%
TGTGGGGAGATGGCTATGAA+AGG + chr6_3:90043599-90043618 Msa0964030:CDS 50.0%
TTCCCGGATGACAAACCTCA+CGG - chr6_3:90043703-90043722 None:intergenic 50.0%
GGGTCAAGACATGCTGTTGT+GGG + chr6_3:90043753-90043772 Msa0964030:CDS 50.0%
GGATGAACGCAAGAGTTGTG+TGG + chr6_3:90043790-90043809 Msa0964030:CDS 50.0%
AGCATGTACCCCACAACGAA+GGG - chr6_3:90043852-90043871 None:intergenic 50.0%
AAGCATGTACCCCACAACGA+AGG - chr6_3:90043853-90043872 None:intergenic 50.0%
TGTAAGGAGACGTGCCATGT+CGG + chr6_3:90043872-90043891 Msa0964030:CDS 50.0%
TGGCTCAACTTCCAGAACTG+TGG + chr6_3:90043940-90043959 Msa0964030:CDS 50.0%
TGTGGGAAGAAGCTGAGATG+TGG + chr6_3:90044130-90044149 Msa0964030:CDS 50.0%
! AGGCATTGTACCGCAAGGTA+GGG - chr6_3:90044263-90044282 None:intergenic 50.0%
CGAACATGGAAGCTGACACA+AGG - chr6_3:90044287-90044306 None:intergenic 50.0%
!! GGCTCTCATAGCTGCCATTT+TGG + chr6_3:90044331-90044350 Msa0964030:CDS 50.0%
AAGGAGGGCAGTCTCCAAAA+TGG - chr6_3:90044348-90044367 None:intergenic 50.0%
!! TTTGACACAGGCACCGAACA+AGG - chr6_3:90044367-90044386 None:intergenic 50.0%
TCGGTGGCCATGTCATTCTT+AGG + chr6_3:90044395-90044414 Msa0964030:CDS 50.0%
GCATTGTCTAGTCCTTCCAC+AGG - chr6_3:90044461-90044480 None:intergenic 50.0%
CCGGGTAGAATATCACAAGG+TGG - chr6_3:90044517-90044536 None:intergenic 50.0%
AAAGGTTTACGAGCGCCATG+TGG + chr6_3:90044544-90044563 Msa0964030:CDS 50.0%
TAACACCAAGCACACGAGCT+GGG - chr6_3:90045206-90045225 None:intergenic 50.0%
TTAACACCAAGCACACGAGC+TGG - chr6_3:90045207-90045226 None:intergenic 50.0%
!! AGCTCGTGTGCTTGGTGTTA+AGG + chr6_3:90045206-90045225 Msa0964030:CDS 50.0%
!! GCTCGTGTGCTTGGTGTTAA+GGG + chr6_3:90045207-90045226 Msa0964030:CDS 50.0%
! AAGCGGCGCATTTAGAGTTG+TGG - chr6_3:90045235-90045254 None:intergenic 50.0%
TCTCGTTTCCAGACTTGCCA+AGG + chr6_3:90045301-90045320 Msa0964030:CDS 50.0%
CTCGTTTCCAGACTTGCCAA+GGG + chr6_3:90045302-90045321 Msa0964030:CDS 50.0%
GCACTAATATCAGCGTCCCT+TGG - chr6_3:90045321-90045340 None:intergenic 50.0%
GGACGCTGATATTAGTGCCT+TGG + chr6_3:90045323-90045342 Msa0964030:CDS 50.0%
!!! GCCTTGGTTTTGAGATTCGG+TGG + chr6_3:90045339-90045358 Msa0964030:CDS 50.0%
CGACTTCGGTTACTAGTGCT+TGG + chr6_3:90045511-90045530 Msa0964030:CDS 50.0%
! AGAACCGCTGCCTTTTTCCA+TGG - chr6_3:90045582-90045601 None:intergenic 50.0%
ATTCGCAGAATCACCGGTAG+TGG - chr6_3:90045649-90045668 None:intergenic 50.0%
CAGCGATGTCTCAACTAAGG+TGG + chr6_3:90045809-90045828 Msa0964030:CDS 50.0%
TGGCGCAAATGGAGGAAACT+CGG + chr6_3:90045845-90045864 Msa0964030:CDS 50.0%
CATTGCTCAGTCTGGGTAAG+AGG - chr6_3:90046109-90046128 None:intergenic 50.0%
CTCTTACCCAGACTGAGCAA+TGG + chr6_3:90046107-90046126 Msa0964030:three_prime_UTR 50.0%
CTTACCCAGACTGAGCAATG+GGG + chr6_3:90046109-90046128 Msa0964030:three_prime_UTR 50.0%
TCCATTCTTGGCGAGGAGGA+CGG - chr6_3:90042443-90042462 None:intergenic 55.0%
GGAATCCATTCTTGGCGAGG+AGG - chr6_3:90042447-90042466 None:intergenic 55.0%
! GAATGGATTCCGAAAGGCGC+TGG + chr6_3:90042456-90042475 Msa0964030:CDS 55.0%
CTAGATGCTCCAGCGCCTTT+CGG - chr6_3:90042468-90042487 None:intergenic 55.0%
!! AACAGTTGTGGTGGTGGTGG+CGG - chr6_3:90042538-90042557 None:intergenic 55.0%
!! GTCAACAGTTGTGGTGGTGG+TGG - chr6_3:90042541-90042560 None:intergenic 55.0%
AGAGGGAACATGTTGCGCAC+AGG + chr6_3:90042739-90042758 Msa0964030:CDS 55.0%
GAGGGAACATGTTGCGCACA+GGG + chr6_3:90042740-90042759 Msa0964030:CDS 55.0%
GGAACATGTTGCTCAGAGGG+TGG + chr6_3:90042797-90042816 Msa0964030:CDS 55.0%
ATGTTGCTCAGAGGGTGGAG+AGG + chr6_3:90042802-90042821 Msa0964030:CDS 55.0%
TGTTGCTCAGAGGGTGGAGA+GGG + chr6_3:90042803-90042822 Msa0964030:CDS 55.0%
AAAGGGGTAGAGGGAGGAGT+GGG + chr6_3:90042874-90042893 Msa0964030:CDS 55.0%
AGGGAGGAGTGGGAATATGG+TGG + chr6_3:90042884-90042903 Msa0964030:CDS 55.0%
GGGAGGAGTGGGAATATGGT+GGG + chr6_3:90042885-90042904 Msa0964030:CDS 55.0%
GGAGGAGTGGGAATATGGTG+GGG + chr6_3:90042886-90042905 Msa0964030:CDS 55.0%
TGGGGAGGCAATATGGACCA+AGG + chr6_3:90042904-90042923 Msa0964030:CDS 55.0%
GGGGAGGCAATATGGACCAA+GGG + chr6_3:90042905-90042924 Msa0964030:CDS 55.0%
TGAGGCAAGCTAGAGTCCCT+TGG - chr6_3:90042924-90042943 None:intergenic 55.0%
TTCGTAGGTCTGCGCCTATC+TGG + chr6_3:90043012-90043031 Msa0964030:CDS 55.0%
CATGGTTCGCCACACGAATG+AGG - chr6_3:90043251-90043270 None:intergenic 55.0%
CATTCGTGTGGCGAACCATG+CGG + chr6_3:90043251-90043270 Msa0964030:CDS 55.0%
ATTCGTGTGGCGAACCATGC+GGG + chr6_3:90043252-90043271 Msa0964030:CDS 55.0%
CGGGAAGCCTCTTGAAAAGG+AGG + chr6_3:90043271-90043290 Msa0964030:CDS 55.0%
TTACACGGAGGACATGGACC+CGG - chr6_3:90043359-90043378 None:intergenic 55.0%
GGGGCAAATGCTTTACACGG+AGG - chr6_3:90043371-90043390 None:intergenic 55.0%
! ACAAGGGCACAAACGAGGAG+GGG - chr6_3:90043390-90043409 None:intergenic 55.0%
! CACAAGGGCACAAACGAGGA+GGG - chr6_3:90043391-90043410 None:intergenic 55.0%
CTCCTCGTTTGTGCCCTTGT+GGG + chr6_3:90043390-90043409 Msa0964030:CDS 55.0%
! TTCCCACAAGGGCACAAACG+AGG - chr6_3:90043395-90043414 None:intergenic 55.0%
TCGCTGTTCTGATCGGCAGT+CGG + chr6_3:90043430-90043449 Msa0964030:CDS 55.0%
GGGTCCTTGTGATCCTTGTC+AGG + chr6_3:90043526-90043545 Msa0964030:CDS 55.0%
CTGCCGTGAGGTTTGTCATC+CGG + chr6_3:90043697-90043716 Msa0964030:CDS 55.0%
TGCCGTGAGGTTTGTCATCC+GGG + chr6_3:90043698-90043717 Msa0964030:CDS 55.0%
GTTTGTCATCCGGGAAGCTG+CGG + chr6_3:90043707-90043726 Msa0964030:CDS 55.0%
TCACATTCACCGCAGCTTCC+CGG - chr6_3:90043719-90043738 None:intergenic 55.0%
CAGCATGTCTTGACCCGACT+TGG - chr6_3:90043749-90043768 None:intergenic 55.0%
CGGGTCAAGACATGCTGTTG+TGG + chr6_3:90043752-90043771 Msa0964030:CDS 55.0%
TGCAGCAAGACCCTTCGTTG+TGG + chr6_3:90043839-90043858 Msa0964030:CDS 55.0%
GCAGCAAGACCCTTCGTTGT+GGG + chr6_3:90043840-90043859 Msa0964030:CDS 55.0%
CAGCAAGACCCTTCGTTGTG+GGG + chr6_3:90043841-90043860 Msa0964030:CDS 55.0%
GTAAGGAGACGTGCCATGTC+GGG + chr6_3:90043873-90043892 Msa0964030:CDS 55.0%
TAAGGAGACGTGCCATGTCG+GGG + chr6_3:90043874-90043893 Msa0964030:CDS 55.0%
!! ATGGTGGACATTCCCCGACA+TGG - chr6_3:90043889-90043908 None:intergenic 55.0%
CGGGGAATGTCCACCATGTA+AGG + chr6_3:90043892-90043911 Msa0964030:CDS 55.0%
CAGCTTCTTCCCACACAGCA+TGG - chr6_3:90044125-90044144 None:intergenic 55.0%
ATTCCTCCTCCCCTACCTTG+CGG + chr6_3:90044250-90044269 Msa0964030:CDS 55.0%
ATTGTACCGCAAGGTAGGGG+AGG - chr6_3:90044259-90044278 None:intergenic 55.0%
GGCATTGTACCGCAAGGTAG+GGG - chr6_3:90044262-90044281 None:intergenic 55.0%
!! GAGGCATTGTACCGCAAGGT+AGG - chr6_3:90044264-90044283 None:intergenic 55.0%
!! AAGGGAGGCATTGTACCGCA+AGG - chr6_3:90044268-90044287 None:intergenic 55.0%
CATGGAAGCTGACACAAGGG+AGG - chr6_3:90044283-90044302 None:intergenic 55.0%
TGAGAGCCTGAATGGCCACA+CGG - chr6_3:90044319-90044338 None:intergenic 55.0%
GGCAGCTATGAGAGCCTGAA+TGG - chr6_3:90044327-90044346 None:intergenic 55.0%
TGGAGACTGCCCTCCTTGTT+CGG + chr6_3:90044351-90044370 Msa0964030:CDS 55.0%
!! ACACAGGCACCGAACAAGGA+GGG - chr6_3:90044363-90044382 None:intergenic 55.0%
GCACCACAAGTCTGTCCACA+TGG - chr6_3:90044562-90044581 None:intergenic 55.0%
GACAGACTTGTGGTGCTCCA+AGG + chr6_3:90044566-90044585 Msa0964030:CDS 55.0%
ACTTGTGGTGCTCCAAGGAG+TGG + chr6_3:90044571-90044590 Msa0964030:CDS 55.0%
TGGCTGCCGGCATATGTGTA+TGG + chr6_3:90044591-90044610 Msa0964030:CDS 55.0%
TGTATGGCTCTCTGTCACCC+TGG + chr6_3:90044607-90044626 Msa0964030:CDS 55.0%
CATCGGGACAAGGACATCCA+GGG - chr6_3:90044627-90044646 None:intergenic 55.0%
ACATCGGGACAAGGACATCC+AGG - chr6_3:90044628-90044647 None:intergenic 55.0%
AAGCTTGCAGTGAACGCTGC+TGG + chr6_3:90045129-90045148 Msa0964030:CDS 55.0%
AACACCAAGCACACGAGCTG+GGG - chr6_3:90045205-90045224 None:intergenic 55.0%
GAAACGAGACAACAAGCCGC+GGG - chr6_3:90045290-90045309 None:intergenic 55.0%
GGAAACGAGACAACAAGCCG+CGG - chr6_3:90045291-90045310 None:intergenic 55.0%
TCCTCATCGCAGTTGCAGCT+CGG - chr6_3:90045425-90045444 None:intergenic 55.0%
TGCAACTGCGATGAGGAGGT+TGG + chr6_3:90045428-90045447 Msa0964030:CDS 55.0%
GCGATGAGGAGGTTGGATCA+CGG + chr6_3:90045435-90045454 Msa0964030:CDS 55.0%
CTGCAGATGCTCCAGCATTC+TGG - chr6_3:90045491-90045510 None:intergenic 55.0%
! TGGAGCATCTGCAGCGACTT+CGG + chr6_3:90045497-90045516 Msa0964030:CDS 55.0%
TCGGTTACTAGTGCTTGGGG+AGG + chr6_3:90045516-90045535 Msa0964030:CDS 55.0%
TGCTTGGGGAGGAACGAAAG+AGG + chr6_3:90045527-90045546 Msa0964030:CDS 55.0%
GCTTGGGGAGGAACGAAAGA+GGG + chr6_3:90045528-90045547 Msa0964030:CDS 55.0%
ACTAAGGTGGAGCCTTCTGC+AGG + chr6_3:90045822-90045841 Msa0964030:CDS 55.0%
GAGAAAGGAGGGAAGGGTCG+AGG + chr6_3:90042406-90042425 Msa0964030:CDS 60.0%
ACCGTCCTCCTCGCCAAGAA+TGG + chr6_3:90042439-90042458 Msa0964030:CDS 60.0%
GGAACATGTTGCGCACAGGG+TGG + chr6_3:90042743-90042762 Msa0964030:CDS 60.0%
GGGTTGAAAGGGGTAGAGGG+AGG + chr6_3:90042868-90042887 Msa0964030:CDS 60.0%
GAAAGGGGTAGAGGGAGGAG+TGG + chr6_3:90042873-90042892 Msa0964030:CDS 60.0%
! GGAGTGGGAATATGGTGGGG+AGG + chr6_3:90042889-90042908 Msa0964030:CDS 60.0%
GGGTTTAACTGGCGGTGTCC+TGG + chr6_3:90043131-90043150 Msa0964030:CDS 60.0%
! CCACAAGGGCACAAACGAGG+AGG - chr6_3:90043392-90043411 None:intergenic 60.0%
CCTCCTCGTTTGTGCCCTTG+TGG + chr6_3:90043389-90043408 Msa0964030:CDS 60.0%
CGGCAGTCGGATCTTACCTG+CGG + chr6_3:90043443-90043462 Msa0964030:CDS 60.0%
!! CTTATCACAGCGCTGACCGC+AGG - chr6_3:90043462-90043481 None:intergenic 60.0%
CACGGCTGAGGAACCGAACA+TGG - chr6_3:90044301-90044320 None:intergenic 60.0%
TGTTCGGTTCCTCAGCCGTG+TGG + chr6_3:90044301-90044320 Msa0964030:CDS 60.0%
!! GACACAGGCACCGAACAAGG+AGG - chr6_3:90044364-90044383 None:intergenic 60.0%
GCGCCATGTGGACAGACTTG+TGG + chr6_3:90044556-90044575 Msa0964030:CDS 60.0%
ATATGCCGGCAGCCACTCCT+TGG - chr6_3:90044586-90044605 None:intergenic 60.0%
TTGCAGTGAACGCTGCTGGC+TGG + chr6_3:90045133-90045152 Msa0964030:CDS 60.0%
! TGCAGTGAACGCTGCTGGCT+GGG + chr6_3:90045134-90045153 Msa0964030:CDS 60.0%
AAGACCCCAGCTCGTGTGCT+TGG + chr6_3:90045198-90045217 Msa0964030:CDS 60.0%
CGCGGGTCCATGTCAACCAA+GGG - chr6_3:90045273-90045292 None:intergenic 60.0%
CCTTGGTTGACATGGACCCG+CGG + chr6_3:90045271-90045290 Msa0964030:CDS 60.0%
TCAGCGTCCCTTGGCAAGTC+TGG - chr6_3:90045312-90045331 None:intergenic 60.0%
CCTCATCGCAGTTGCAGCTC+GGG - chr6_3:90045424-90045443 None:intergenic 60.0%
GAGCTGCAACTGCGATGAGG+AGG + chr6_3:90045424-90045443 Msa0964030:CDS 60.0%
TGGGGAGGAACGAAAGAGGG+AGG + chr6_3:90045531-90045550 Msa0964030:CDS 60.0%
GGAGGAACGAAAGAGGGAGG+AGG + chr6_3:90045534-90045553 Msa0964030:CDS 60.0%
AAGGTGGAGCCTTCTGCAGG+TGG + chr6_3:90045825-90045844 Msa0964030:CDS 60.0%
CCATTTGCGCCACCTGCAGA+AGG - chr6_3:90045837-90045856 None:intergenic 60.0%
CCTTCTGCAGGTGGCGCAAA+TGG + chr6_3:90045834-90045853 Msa0964030:CDS 60.0%
TCTGCAGGTGGCGCAAATGG+AGG + chr6_3:90045837-90045856 Msa0964030:CDS 60.0%
GGCGAGGAGGACGGTGTGAA+GGG - chr6_3:90042434-90042453 None:intergenic 65.0%
TGGCGAGGAGGACGGTGTGA+AGG - chr6_3:90042435-90042454 None:intergenic 65.0%
!! GGTGGTGGATGTGGTGGAGG+CGG - chr6_3:90042493-90042512 None:intergenic 65.0%
!! AGTTGTGGTGGTGGTGGCGG+CGG - chr6_3:90042535-90042554 None:intergenic 65.0%
ACGGAGGACATGGACCCGGA+TGG - chr6_3:90043355-90043374 None:intergenic 65.0%
GTACCGCAAGGTAGGGGAGG+AGG - chr6_3:90044256-90044275 None:intergenic 65.0%
CCTGAATGGCCACACGGCTG+AGG - chr6_3:90044313-90044332 None:intergenic 65.0%
CCTCAGCCGTGTGGCCATTC+AGG + chr6_3:90044310-90044329 Msa0964030:CDS 65.0%
GTGCTCCAAGGAGTGGCTGC+CGG + chr6_3:90044578-90044597 Msa0964030:CDS 65.0%
CCGCGGGTCCATGTCAACCA+AGG - chr6_3:90045274-90045293 None:intergenic 65.0%
ATCGCAGTTGCAGCTCGGGC+AGG - chr6_3:90045420-90045439 None:intergenic 65.0%
CCCGAGCTGCAACTGCGATG+AGG + chr6_3:90045421-90045440 Msa0964030:CDS 65.0%
AAGGCAGCGGTTCTCGACCC+AGG + chr6_3:90045588-90045607 Msa0964030:CDS 65.0%
CAGCGGTTCTCGACCCAGGT+TGG + chr6_3:90045592-90045611 Msa0964030:CDS 65.0%
!! GGCGGTGGTGGATGTGGTGG+AGG - chr6_3:90042496-90042515 None:intergenic 70.0%
!! GGTGGCGGTGGTGGATGTGG+TGG - chr6_3:90042499-90042518 None:intergenic 70.0%
!! GGCGGTGGCGGTGGTGGATG+TGG - chr6_3:90042502-90042521 None:intergenic 75.0%
!! TGTGGTGGTGGTGGCGGCGG+CGG - chr6_3:90042532-90042551 None:intergenic 75.0%
!! GGTGGAGGCGGTGGCGGTGG+TGG - chr6_3:90042508-90042527 None:intergenic 80.0%
!!! GGTGGTGGAGGCGGTGGCGG+TGG - chr6_3:90042511-90042530 None:intergenic 80.0%
!!! GGCGGTGGTGGAGGCGGTGG+CGG - chr6_3:90042514-90042533 None:intergenic 80.0%
!!! GGCGGCGGTGGTGGAGGCGG+TGG - chr6_3:90042517-90042536 None:intergenic 85.0%
!!! GGCGGCGGCGGTGGTGGAGG+CGG - chr6_3:90042520-90042539 None:intergenic 85.0%
!! GGTGGCGGCGGCGGTGGTGG+AGG - chr6_3:90042523-90042542 None:intergenic 85.0%
!!! GGTGGTGGCGGCGGCGGTGG+TGG - chr6_3:90042526-90042545 None:intergenic 85.0%
!!! GGTGGTGGTGGCGGCGGCGG+TGG - chr6_3:90042529-90042548 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 90041068 90046180 90041068 ID=Msa0964030;Name=Msa0964030
chr6_3 mRNA 90041068 90046180 90041068 ID=Msa0964030-mRNA-1;Parent=Msa0964030;Name=Msa0964030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=177|1|1|1|0|0.5|2|260|1177
chr6_3 exon 90041068 90041229 90041068 ID=Msa0964030-mRNA-1:exon:16207;Parent=Msa0964030-mRNA-1
chr6_3 exon 90042372 90046180 90042372 ID=Msa0964030-mRNA-1:exon:16208;Parent=Msa0964030-mRNA-1
chr6_3 five_prime_UTR 90041068 90041229 90041068 ID=Msa0964030-mRNA-1:five_prime_utr;Parent=Msa0964030-mRNA-1
chr6_3 five_prime_UTR 90042372 90042386 90042372 ID=Msa0964030-mRNA-1:five_prime_utr;Parent=Msa0964030-mRNA-1
chr6_3 CDS 90042387 90045920 90042387 ID=Msa0964030-mRNA-1:cds;Parent=Msa0964030-mRNA-1
chr6_3 three_prime_UTR 90045921 90046180 90045921 ID=Msa0964030-mRNA-1:three_prime_utr;Parent=Msa0964030-mRNA-1
Gene Sequence

>Msa0964030

ATGAGCTTGCAACAAAGACGAGAAAGGAGGGAAGGGTCGAGGTTCCCTTCACACCGTCCTCCTCGCCAAGAATGGATTCCGAAAGGCGCTGGAGCATCTAGCTCCGCCTCCACCACATCCACCACCGCCACCGCCTCCACCACCGCCGCCGCCACCACCACCACAACTGTTGACCAACCTACAAGTTTGCACTCTCATGAGAAGAATACTAATAATGATGGTGGTTCATCCAATCAAGGAGCTGTTGCTCCAACATTTGCTAGGCATAGAAGTAATCACCATGTTGCTCATAGGGTGGAAAGGGAACATGTTGCTCATAGGATGGACAGGGATCATGTTTCTCAGAGGGTGGAGAGGGAACATGTTGCGCACAGGGTGGAGAGAGAACATGCTGCTCATCGCGTTGAAAGGGAACATGTTGCTCAGAGGGTGGAGAGGGAACATGTTGCTCATCGTGTGGAGAGGGAACATGTTGCTCATAGGGTTGAAAGGGGTAGAGGGAGGAGTGGGAATATGGTGGGGAGGCAATATGGACCAAGGGACTCTAGCTTGCCTCAATTAGTGCAGGAGATTCAGGAGAAGCTCACGAAAGGTACTGTGGAGTGCATGATTTGTTATGATATGGTTCGTAGGTCTGCGCCTATCTGGTCTTGCTCCAGTTGCTACTCTATCTTTCATCTGAATTGCATCAAGAAGTGGGCTCGTGCACCCACCTCAGTTGATTTATCGGCGGAGAAGAATCTAGGGTTTAACTGGCGGTGTCCTGGTTGTCAGTCTGTGCAACATACGTCTTCAAAGGATATTAAGTATGTTTGCTTTTGTGGGAAGAGGGTTGACCCTCCGTCTGATTTGTATTTAACACCTCATTCGTGTGGCGAACCATGCGGGAAGCCTCTTGAAAAGGAGGTGTTTGTTACTGAAGAGAGAAAGGACGAGCTTTGCCCTCATGCTTGTGTCTTGCAATGCCATCCGGGTCCATGTCCTCCGTGTAAAGCATTTGCCCCTCCTCGTTTGTGCCCTTGTGGGAAGAAAAGAATTGCTACTCGCTGTTCTGATCGGCAGTCGGATCTTACCTGCGGTCAGCGCTGTGATAAGCTTCTTGATTGTGGACGTCATCGTTGTGAAAATGCATGCCATGTGGGTCCTTGTGATCCTTGTCAGGTGCTAATTGAGGCCTCTTGCTTTTGCAGTAAAATGACACAGGTTATTTTTTGTGGGGAGATGGCTATGAAAGGTGAATTTGAAGCAGAAGGGGGAGTTTTTTCTTGTGGTTCCAATTGTGGAAATGTGCTTGGCTGCAGTAATCATATCTGCCGTGAGGTTTGTCATCCGGGAAGCTGCGGTGAATGTGAATTTTTACCAAGTCGGGTCAAGACATGCTGTTGTGGGAAAACAAAGTTGGAGGATGAACGCAAGAGTTGTGTGGATCCAATTCCTACCTGCTCAAAAGTATGCAGCAAGACCCTTCGTTGTGGGGTACATGCTTGTAAGGAGACGTGCCATGTCGGGGAATGTCCACCATGTAAGGTCCTAATTTCACAGAAATGTCGTTGTGGCTCAACTTCCAGAACTGTGGAATGCTATAAAACAACAACTGAGAATCAGAAATTTACTTGTCAAAAGCCGTGTGGGGCAAAGAAGAATTGTGGAAGGCACCGATGTAGTGAAAAGTGTTGTCCATTGTCTGGTCCAAATAATGGTTTGACTAGTCCGGATTGGGATCCTCACTTTTGTTCCATGCTGTGTGGGAAGAAGCTGAGATGTGGCCAGCATGTGTGTGAAACGTTGTGTCACAGTGGTCATTGCCCACCTTGTCTTGAAACAATCTTCACTGATTTAGCATGTGCTTGTGGTATGACTTCTATTCCTCCTCCCCTACCTTGCGGTACAATGCCTCCCTTGTGTCAGCTTCCATGTTCGGTTCCTCAGCCGTGTGGCCATTCAGGCTCTCATAGCTGCCATTTTGGAGACTGCCCTCCTTGTTCGGTGCCTGTGTCAAAAGAATGTGTCGGTGGCCATGTCATTCTTAGGAACATACCTTGTGGCTCAAATAATATTAAATGCAATAATCCCTGTGGAAGGACTAGACAATGCGGTTTACATGCATGTGGTAGATCATGTCACTCCCCACCTTGTGATATTCTACCCGGTATTGTGAAAGGTTTACGAGCGCCATGTGGACAGACTTGTGGTGCTCCAAGGAGTGGCTGCCGGCATATGTGTATGGCTCTCTGTCACCCTGGATGTCCTTGTCCCGATGTAAGATGTGAATTCTCCGTTACAATTACTTGTTCTTGTGGCCGCATATCAGCAAATGTTCCTTGTGATGTTGGTGGTAATAACAGTAATTATAATGCTGATGCGATATTTGAAGCTTCGATCATTCAAAAATTGCCCATGCCTCTTCAACCAGTTGATGCAAATGGCCAAAAAGTTCCTCTTGGACAAAGAAAACTGATGTGTGACGAGGAATGTGCTAAGTTGGAGCGTAAAAGGGTTCTTGCTGATGCCTTTGACATCACTCCAAGTCTTGATGCTCTCCATTTCGGTGAGAATTCTTCTTATGAGTTGCTTTCTGACACGTTTAGACGTGATCCAAAGTGGGTTTTGGCTATTGAGGAGAGATGCAAAATATTAGTACTTGGGAAAAGCAAAGGAACTACACATGGTTTGAAAGTCCATGTCTTTTGTCCTATGATAAAGGATAAAAGAGATGCGGTGAGAATGATTGCTGAAAGATGGAAGCTTGCAGTGAACGCTGCTGGCTGGGAGCCAAAGAGATTCATCGTAATTTCTGCCACTCAAAAATCTAAGACCCCAGCTCGTGTGCTTGGTGTTAAGGGTACCACAACTCTAAATGCGCCGCTTCCTACTGCATTTGATCCCTTGGTTGACATGGACCCGCGGCTTGTTGTCTCGTTTCCAGACTTGCCAAGGGACGCTGATATTAGTGCCTTGGTTTTGAGATTCGGTGGTGAATGTGAGCTTGTTTGGTTGAACGACAGGAATGCTTTGGCTGTCTTTCACGATCCTGCCCGAGCTGCAACTGCGATGAGGAGGTTGGATCACGGAACAGTTTATCAGGGTGCTGTTTCGTTTGTCCAGAATGCTGGAGCATCTGCAGCGACTTCGGTTACTAGTGCTTGGGGAGGAACGAAAGAGGGAGGAGGACTGTCAACACTGAGAAGCAATCCATGGAAAAAGGCAGCGGTTCTCGACCCAGGTTGGAAAGAAGATTCTTGGGGCGATGAACAATGGACCACTACCGGTGATTCTGCGAATATCCAACCATCGGTTCTGAAGAAAGAAGCGCCAATACCTGCTTCATTGAATCCTTGGAATGTTCTGAATCATGAATCGAGTTCGAGTTCATCATCGGCAACTGTCATAAGAAGTGTAGCTTCTGGAAAACAAACTGAAAGCAGCGATGTCTCAACTAAGGTGGAGCCTTCTGCAGGTGGCGCAAATGGAGGAAACTCGGATGCAACAGAAGCTGCTGAAGTTGTAGATGATTGGGAGAAGGCTTTTGAATGA
Protein sequence

>Msa0964030

MSLQQRRERREGSRFPSHRPPRQEWIPKGAGASSSASTTSTTATASTTAAATTTTTVDQPTSLHSHEKNTNNDGGSSNQGAVAPTFARHRSNHHVAHRVEREHVAHRMDRDHVSQRVEREHVAHRVEREHAAHRVEREHVAQRVEREHVAHRVEREHVAHRVERGRGRSGNMVGRQYGPRDSSLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNLGFNWRCPGCQSVQHTSSKDIKYVCFCGKRVDPPSDLYLTPHSCGEPCGKPLEKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGRHRCENACHVGPCDPCQVLIEASCFCSKMTQVIFCGEMAMKGEFEAEGGVFSCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKTCCCGKTKLEDERKSCVDPIPTCSKVCSKTLRCGVHACKETCHVGECPPCKVLISQKCRCGSTSRTVECYKTTTENQKFTCQKPCGAKKNCGRHRCSEKCCPLSGPNNGLTSPDWDPHFCSMLCGKKLRCGQHVCETLCHSGHCPPCLETIFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVSKECVGGHVILRNIPCGSNNIKCNNPCGRTRQCGLHACGRSCHSPPCDILPGIVKGLRAPCGQTCGAPRSGCRHMCMALCHPGCPCPDVRCEFSVTITCSCGRISANVPCDVGGNNSNYNADAIFEASIIQKLPMPLQPVDANGQKVPLGQRKLMCDEECAKLERKRVLADAFDITPSLDALHFGENSSYELLSDTFRRDPKWVLAIEERCKILVLGKSKGTTHGLKVHVFCPMIKDKRDAVRMIAERWKLAVNAAGWEPKRFIVISATQKSKTPARVLGVKGTTTLNAPLPTAFDPLVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDRNALAVFHDPARAATAMRRLDHGTVYQGAVSFVQNAGASAATSVTSAWGGTKEGGGLSTLRSNPWKKAAVLDPGWKEDSWGDEQWTTTGDSANIQPSVLKKEAPIPASLNPWNVLNHESSSSSSSATVIRSVASGKQTESSDVSTKVEPSAGGANGGNSDATEAAEVVDDWEKAFE*