Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0925250 | Msa0966070 | 0.808353 | 3.229592e-50 | -8.615850e-47 |
| Msa0925260 | Msa0966070 | 0.827075 | 1.911478e-54 | -8.615850e-47 |
| Msa0966070 | Msa0966090 | 0.802282 | 6.042146e-49 | -8.615850e-47 |
| Msa0966070 | Msa1432770 | 0.805337 | 1.401784e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 89 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATGGCCCTAGTTCTTT+TGG | 0.230169 | 6_3:+94023433 | None:intergenic |
| AACCATGGACCTAATTCTTT+TGG | 0.277801 | 6_3:+94023253 | None:intergenic |
| TGAATGCTTGGATATCTATT+AGG | 0.305363 | 6_3:+94023626 | None:intergenic |
| TCTAATCCTATTCGATCTCC+TGG | 0.380372 | 6_3:+94023586 | None:intergenic |
| GGTGTTGAAGTTGGCGGTGG+CGG | 0.382336 | 6_3:-94023353 | Msa0966070:CDS |
| ATGGTTGAAGTTGGTGGTGG+TGG | 0.384418 | 6_3:-94023416 | Msa0966070:CDS |
| GGAGAAGGTCCAAAAGAATT+AGG | 0.386566 | 6_3:-94023262 | Msa0966070:CDS |
| ATGGTTGAAGTTGGCGGCGG+TGG | 0.403451 | 6_3:-94023236 | Msa0966070:CDS |
| GATGGTGTAGTAGGTGGTGG+TGG | 0.424996 | 6_3:-94023290 | Msa0966070:CDS |
| GATGGTGTAGTAGGTGGTGG+TGG | 0.424996 | 6_3:-94023470 | Msa0966070:CDS |
| TTGAAGGTGGTGGTGGCAAA+AGG | 0.427775 | 6_3:-94023499 | Msa0966070:CDS |
| CCAATCGGATATTGAATGCT+TGG | 0.430148 | 6_3:+94023614 | None:intergenic |
| GGCAGTGGCACCGGTGTTGA+AGG | 0.430800 | 6_3:-94023515 | Msa0966070:CDS |
| GTTGGCGGTGGCGGTGGCAC+CGG | 0.439590 | 6_3:-94023344 | Msa0966070:CDS |
| TAGTAGGTGGTGGTGGGGAA+AGG | 0.439707 | 6_3:-94023283 | Msa0966070:CDS |
| TAGTAGGTGGTGGTGGGGAA+AGG | 0.439707 | 6_3:-94023463 | Msa0966070:CDS |
| ACCGCCGCCAACTTCAACCA+TGG | 0.456675 | 6_3:+94023238 | None:intergenic |
| GTTGAAGTTGGCGGTGGCGG+TGG | 0.456963 | 6_3:-94023350 | Msa0966070:CDS |
| GCCACCACCACCTTCAACAC+CGG | 0.478129 | 6_3:+94023505 | None:intergenic |
| ACCGGTGTTGAAGGTGGTGG+TGG | 0.482239 | 6_3:-94023506 | Msa0966070:CDS |
| GGCGGTGGCACCGGAGCTAA+AGG | 0.484682 | 6_3:-94023335 | Msa0966070:CDS |
| GCCACCACCACCTTTAGCTC+CGG | 0.492295 | 6_3:+94023325 | None:intergenic |
| GTTAGCGGTGGCAGTGGCAC+CGG | 0.492857 | 6_3:-94023524 | Msa0966070:CDS |
| ATGGATGGTGTTGAAGTTGG+CGG | 0.497191 | 6_3:-94023179 | Msa0966070:CDS |
| ATGGATGGTGTTGAAGTTGG+CGG | 0.497191 | 6_3:-94023359 | Msa0966070:CDS |
| ATGCGATGGCGAAAGGATGA+AGG | 0.499769 | 6_3:-94023558 | Msa0966070:CDS |
| GAAAACCCAGGAGATCGAAT+AGG | 0.505594 | 6_3:-94023592 | Msa0966070:CDS |
| AGGAAGACCGATGGTGTAGT+AGG | 0.508120 | 6_3:-94023299 | Msa0966070:CDS |
| AGGAGGACCGATGGTGTAGT+AGG | 0.508120 | 6_3:-94023479 | Msa0966070:CDS |
| GGTGGCAATGAGGCTGTAGA+TGG | 0.510887 | 6_3:-94023218 | Msa0966070:CDS |
| ATTAGGTCCATGGTTGAAGT+TGG | 0.515105 | 6_3:-94023245 | Msa0966070:CDS |
| GGAGAAGGTCCAAAAGAACT+AGG | 0.517053 | 6_3:-94023442 | Msa0966070:CDS |
| AGGATGGATGGTGTTGAAGT+TGG | 0.519257 | 6_3:-94023182 | Msa0966070:CDS |
| AGGATGGATGGTGTTGAAGT+TGG | 0.519257 | 6_3:-94023362 | Msa0966070:CDS |
| ATGGTGTAGTAGGTGGTGGT+GGG | 0.521928 | 6_3:-94023289 | Msa0966070:CDS |
| ATGGTGTAGTAGGTGGTGGT+GGG | 0.521928 | 6_3:-94023469 | Msa0966070:CDS |
| AGGATTAGAGCTCGATGCGA+TGG | 0.523663 | 6_3:-94023572 | Msa0966070:CDS |
| GAGCTCGATGCGATGGCGAA+AGG | 0.524764 | 6_3:-94023565 | Msa0966070:CDS |
| AGGTCCATGGTTGAAGTTGG+CGG | 0.524957 | 6_3:-94023242 | Msa0966070:CDS |
| ACCACCACCAACTTCAACCA+TGG | 0.530377 | 6_3:+94023418 | None:intergenic |
| GGCACCGGTGTTGAAGGTGG+TGG | 0.531179 | 6_3:-94023509 | Msa0966070:CDS |
| ACCGGAGCTAAAGGTGGTGG+TGG | 0.536747 | 6_3:-94023326 | Msa0966070:CDS |
| GTGGTGGTGGGGAAAGGAGA+AGG | 0.544468 | 6_3:-94023277 | Msa0966070:CDS |
| GTGGTGGTGGGGAAAGGAGA+AGG | 0.544468 | 6_3:-94023457 | Msa0966070:CDS |
| GGTGGCAACGAGGCTGCAGA+TGG | 0.546589 | 6_3:-94023398 | Msa0966070:CDS |
| GGCACCGGAGCTAAAGGTGG+TGG | 0.547717 | 6_3:-94023329 | Msa0966070:CDS |
| GCCATGGTTGAAGTTGGTGG+TGG | 0.555587 | 6_3:-94023419 | Msa0966070:CDS |
| ACTAGGGCCATGGTTGAAGT+TGG | 0.556432 | 6_3:-94023425 | Msa0966070:CDS |
| GATGGTGTTGAAGTTGGCGG+TGG | 0.556923 | 6_3:-94023176 | Msa0966070:CDS |
| AGGGCCATGGTTGAAGTTGG+TGG | 0.557244 | 6_3:-94023422 | Msa0966070:CDS |
| ACCGATGGTGTAGTAGGTGG+TGG | 0.559678 | 6_3:-94023473 | Msa0966070:CDS |
| CCAAGCATTCAATATCCGAT+TGG | 0.562018 | 6_3:-94023614 | Msa0966070:CDS |
| GGTGGACAAATGAGGATGGA+TGG | 0.565590 | 6_3:-94023194 | Msa0966070:CDS |
| AACGAGGCTGCAGATGGTGG+TGG | 0.566131 | 6_3:-94023392 | Msa0966070:CDS |
| CTAAAGGTGGTGGTGGCGAA+AGG | 0.567473 | 6_3:-94023319 | Msa0966070:CDS |
| GGCAACGAGGCTGCAGATGG+TGG | 0.567898 | 6_3:-94023395 | Msa0966070:CDS |
| CTAATCCTATTCGATCTCCT+GGG | 0.568128 | 6_3:+94023587 | None:intergenic |
| GATGGTGTTGAAGTTGGCGG+TGG | 0.568175 | 6_3:-94023356 | Msa0966070:CDS |
| AAGGATGGTGTTGAAGTTAG+CGG | 0.581559 | 6_3:-94023539 | Msa0966070:CDS |
| GTTGAAGTTAGCGGTGGCAG+TGG | 0.584345 | 6_3:-94023530 | Msa0966070:CDS |
| ACCACCACCTACTACACCAT+CGG | 0.584446 | 6_3:+94023292 | None:intergenic |
| ACCACCACCTACTACACCAT+CGG | 0.586618 | 6_3:+94023472 | None:intergenic |
| GTCCAAAAGAATTAGGTCCA+TGG | 0.587767 | 6_3:-94023255 | Msa0966070:CDS |
| TGGTGGTGGACAAATGAGGA+TGG | 0.587880 | 6_3:-94023198 | Msa0966070:CDS |
| GTCCAAAAGAACTAGGGCCA+TGG | 0.592832 | 6_3:-94023435 | Msa0966070:CDS |
| AGTGGCACCGGTGTTGAAGG+TGG | 0.594213 | 6_3:-94023512 | Msa0966070:CDS |
| GGTGGCACCGGAGCTAAAGG+TGG | 0.599376 | 6_3:-94023332 | Msa0966070:CDS |
| TCCATGGTTGAAGTTGGCGG+CGG | 0.600656 | 6_3:-94023239 | Msa0966070:CDS |
| GAGAAGGTCCAAAAGAACTA+GGG | 0.602171 | 6_3:-94023441 | Msa0966070:CDS |
| ACCGATGGTGTAGTAGGTGG+TGG | 0.605781 | 6_3:-94023293 | Msa0966070:CDS |
| AAGGTGGTGGTGGCAAAAGG+AGG | 0.615115 | 6_3:-94023496 | Msa0966070:CDS |
| GCTGAGATATTAGAAAAGCT+AGG | 0.625247 | 6_3:-94023134 | Msa0966070:CDS |
| AATGAGGCTGTAGATGGTGG+TGG | 0.626981 | 6_3:-94023212 | Msa0966070:CDS |
| GGCAATGAGGCTGTAGATGG+TGG | 0.632531 | 6_3:-94023215 | Msa0966070:CDS |
| AATATCCGATTGGAAAACCC+AGG | 0.633825 | 6_3:-94023604 | Msa0966070:CDS |
| GCTTGGATATCTATTAGGCA+TGG | 0.639413 | 6_3:+94023631 | None:intergenic |
| AGTTGGCGGCGGTGGCAATG+AGG | 0.640501 | 6_3:-94023228 | Msa0966070:CDS |
| TGGTGTAGTAGGTGGTGGTG+GGG | 0.643420 | 6_3:-94023288 | Msa0966070:CDS |
| TGGTGTAGTAGGTGGTGGTG+GGG | 0.643420 | 6_3:-94023468 | Msa0966070:CDS |
| GGTGGCAAAAGGAGGACCGA+TGG | 0.654712 | 6_3:-94023488 | Msa0966070:CDS |
| AAGACCGATGGTGTAGTAGG+TGG | 0.662023 | 6_3:-94023296 | Msa0966070:CDS |
| AGGACCGATGGTGTAGTAGG+TGG | 0.662023 | 6_3:-94023476 | Msa0966070:CDS |
| GTTGGCGGTGGAGATGTACA+TGG | 0.682670 | 6_3:-94023164 | Msa0966070:CDS |
| GATGGTGTTGAAGTTAGCGG+TGG | 0.691429 | 6_3:-94023536 | Msa0966070:CDS |
| GGTGGCGAAAGGAAGACCGA+TGG | 0.736074 | 6_3:-94023308 | Msa0966070:CDS |
| TAGATGGTGGTGGACAAATG+AGG | 0.738978 | 6_3:-94023202 | Msa0966070:CDS |
| GATGGCGAAAGGATGAAGGA+TGG | 0.748943 | 6_3:-94023554 | Msa0966070:CDS |
| AGTTGGTGGTGGTGGCAACG+AGG | 0.756717 | 6_3:-94023408 | Msa0966070:CDS |
| GGCGGTGGAGATGTACATGG+TGG | 0.790603 | 6_3:-94023161 | Msa0966070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGAATGCTTGGATATCTATT+AGG | + | chr6_3:94023103-94023122 | None:intergenic | 30.0% | |
| ! | AACCATGGACCTAATTCTTT+TGG | + | chr6_3:94023476-94023495 | None:intergenic | 35.0% |
| GCTGAGATATTAGAAAAGCT+AGG | - | chr6_3:94023592-94023611 | Msa0966070:CDS | 35.0% | |
| CCAATCGGATATTGAATGCT+TGG | + | chr6_3:94023115-94023134 | None:intergenic | 40.0% | |
| CCAAGCATTCAATATCCGAT+TGG | - | chr6_3:94023112-94023131 | Msa0966070:CDS | 40.0% | |
| AATATCCGATTGGAAAACCC+AGG | - | chr6_3:94023122-94023141 | Msa0966070:CDS | 40.0% | |
| CTAATCCTATTCGATCTCCT+GGG | + | chr6_3:94023142-94023161 | None:intergenic | 40.0% | |
| TCTAATCCTATTCGATCTCC+TGG | + | chr6_3:94023143-94023162 | None:intergenic | 40.0% | |
| ! | AAGGATGGTGTTGAAGTTAG+CGG | - | chr6_3:94023187-94023206 | Msa0966070:CDS | 40.0% |
| GAGAAGGTCCAAAAGAACTA+GGG | - | chr6_3:94023285-94023304 | Msa0966070:CDS | 40.0% | |
| GGAGAAGGTCCAAAAGAATT+AGG | - | chr6_3:94023464-94023483 | Msa0966070:CDS | 40.0% | |
| GTCCAAAAGAATTAGGTCCA+TGG | - | chr6_3:94023471-94023490 | Msa0966070:CDS | 40.0% | |
| ATTAGGTCCATGGTTGAAGT+TGG | - | chr6_3:94023481-94023500 | Msa0966070:CDS | 40.0% | |
| ! | GATCTCCTGGGTTTTCCAAT+CGG | + | chr6_3:94023130-94023149 | None:intergenic | 45.0% |
| GAAAACCCAGGAGATCGAAT+AGG | - | chr6_3:94023134-94023153 | Msa0966070:CDS | 45.0% | |
| GGAGAAGGTCCAAAAGAACT+AGG | - | chr6_3:94023284-94023303 | Msa0966070:CDS | 45.0% | |
| !! | AACCATGGCCCTAGTTCTTT+TGG | + | chr6_3:94023296-94023315 | None:intergenic | 45.0% |
| !! | CAGATGGTGGTGGAAAAATG+AGG | - | chr6_3:94023344-94023363 | Msa0966070:CDS | 45.0% |
| !! | TGGTGGTGGAAAAATGAGGA+TGG | - | chr6_3:94023348-94023367 | Msa0966070:CDS | 45.0% |
| GGTGGAAAAATGAGGATGGA+TGG | - | chr6_3:94023352-94023371 | Msa0966070:CDS | 45.0% | |
| ! | AGGATGGATGGTGTTGAAGT+TGG | - | chr6_3:94023364-94023383 | Msa0966070:CDS | 45.0% |
| ! | ATGGATGGTGTTGAAGTTGG+CGG | - | chr6_3:94023367-94023386 | Msa0966070:CDS | 45.0% |
| !! | TAGATGGTGGTGGACAAATG+AGG | - | chr6_3:94023524-94023543 | Msa0966070:CDS | 45.0% |
| ! | AGGATGGATGGTGTTGAAGT+TGG | - | chr6_3:94023364-94023383 | Msa0966070:CDS | 45.0% |
| ! | ATGGATGGTGTTGAAGTTGG+CGG | - | chr6_3:94023367-94023386 | Msa0966070:CDS | 45.0% |
| AGGATTAGAGCTCGATGCGA+TGG | - | chr6_3:94023154-94023173 | Msa0966070:CDS | 50.0% | |
| ATGCGATGGCGAAAGGATGA+AGG | - | chr6_3:94023168-94023187 | Msa0966070:CDS | 50.0% | |
| GATGGCGAAAGGATGAAGGA+TGG | - | chr6_3:94023172-94023191 | Msa0966070:CDS | 50.0% | |
| ! | GATGGTGTTGAAGTTAGCGG+TGG | - | chr6_3:94023190-94023209 | Msa0966070:CDS | 50.0% |
| !! | TTGAAGGTGGTGGTGGCAAA+AGG | - | chr6_3:94023227-94023246 | Msa0966070:CDS | 50.0% |
| ACCACCACCTACTACACCAT+CGG | + | chr6_3:94023257-94023276 | None:intergenic | 50.0% | |
| ! | ATGGTGTAGTAGGTGGTGGT+GGG | - | chr6_3:94023257-94023276 | Msa0966070:CDS | 50.0% |
| GTCCAAAAGAACTAGGGCCA+TGG | - | chr6_3:94023291-94023310 | Msa0966070:CDS | 50.0% | |
| ACTAGGGCCATGGTTGAAGT+TGG | - | chr6_3:94023301-94023320 | Msa0966070:CDS | 50.0% | |
| ACCACCACCAACTTCAACCA+TGG | + | chr6_3:94023311-94023330 | None:intergenic | 50.0% | |
| !! | ATGGTTGAAGTTGGTGGTGG+TGG | - | chr6_3:94023310-94023329 | Msa0966070:CDS | 50.0% |
| AGGAAGACCGATGGTGTAGT+AGG | - | chr6_3:94023427-94023446 | Msa0966070:CDS | 50.0% | |
| AAGACCGATGGTGTAGTAGG+TGG | - | chr6_3:94023430-94023449 | Msa0966070:CDS | 50.0% | |
| ACCACCACCTACTACACCAT+CGG | + | chr6_3:94023257-94023276 | None:intergenic | 50.0% | |
| ! | ATGGTGTAGTAGGTGGTGGT+GGG | - | chr6_3:94023257-94023276 | Msa0966070:CDS | 50.0% |
| AGGTCCATGGTTGAAGTTGG+CGG | - | chr6_3:94023484-94023503 | Msa0966070:CDS | 50.0% | |
| ! | AATGAGGCTGTAGATGGTGG+TGG | - | chr6_3:94023514-94023533 | Msa0966070:CDS | 50.0% |
| !! | TGGTGGTGGACAAATGAGGA+TGG | - | chr6_3:94023528-94023547 | Msa0966070:CDS | 50.0% |
| GGTGGACAAATGAGGATGGA+TGG | - | chr6_3:94023532-94023551 | Msa0966070:CDS | 50.0% | |
| GTTGAAGTTAGCGGTGGCAG+TGG | - | chr6_3:94023196-94023215 | Msa0966070:CDS | 55.0% | |
| !! | AAGGTGGTGGTGGCAAAAGG+AGG | - | chr6_3:94023230-94023249 | Msa0966070:CDS | 55.0% |
| AGGAGGACCGATGGTGTAGT+AGG | - | chr6_3:94023247-94023266 | Msa0966070:CDS | 55.0% | |
| AGGACCGATGGTGTAGTAGG+TGG | - | chr6_3:94023250-94023269 | Msa0966070:CDS | 55.0% | |
| ACCGATGGTGTAGTAGGTGG+TGG | - | chr6_3:94023253-94023272 | Msa0966070:CDS | 55.0% | |
| ! | GATGGTGTAGTAGGTGGTGG+TGG | - | chr6_3:94023256-94023275 | Msa0966070:CDS | 55.0% |
| ! | TGGTGTAGTAGGTGGTGGTG+GGG | - | chr6_3:94023258-94023277 | Msa0966070:CDS | 55.0% |
| !! | TAGTAGGTGGTGGTGGGGAA+AGG | - | chr6_3:94023263-94023282 | Msa0966070:CDS | 55.0% |
| AGGGCCATGGTTGAAGTTGG+TGG | - | chr6_3:94023304-94023323 | Msa0966070:CDS | 55.0% | |
| !! | GCCATGGTTGAAGTTGGTGG+TGG | - | chr6_3:94023307-94023326 | Msa0966070:CDS | 55.0% |
| ! | GATGGTGTTGAAGTTGGCGG+TGG | - | chr6_3:94023370-94023389 | Msa0966070:CDS | 55.0% |
| !! | CTAAAGGTGGTGGTGGCGAA+AGG | - | chr6_3:94023407-94023426 | Msa0966070:CDS | 55.0% |
| ACCGATGGTGTAGTAGGTGG+TGG | - | chr6_3:94023253-94023272 | Msa0966070:CDS | 55.0% | |
| ! | GATGGTGTAGTAGGTGGTGG+TGG | - | chr6_3:94023256-94023275 | Msa0966070:CDS | 55.0% |
| ! | TGGTGTAGTAGGTGGTGGTG+GGG | - | chr6_3:94023258-94023277 | Msa0966070:CDS | 55.0% |
| !! | TAGTAGGTGGTGGTGGGGAA+AGG | - | chr6_3:94023263-94023282 | Msa0966070:CDS | 55.0% |
| TCCATGGTTGAAGTTGGCGG+CGG | - | chr6_3:94023487-94023506 | Msa0966070:CDS | 55.0% | |
| GGTGGCAATGAGGCTGTAGA+TGG | - | chr6_3:94023508-94023527 | Msa0966070:CDS | 55.0% | |
| GGCAATGAGGCTGTAGATGG+TGG | - | chr6_3:94023511-94023530 | Msa0966070:CDS | 55.0% | |
| ! | GATGGTGTTGAAGTTGGCGG+TGG | - | chr6_3:94023370-94023389 | Msa0966070:CDS | 55.0% |
| GTTGGCGGTGGAGATGTACA+TGG | - | chr6_3:94023562-94023581 | Msa0966070:CDS | 55.0% | |
| GAGCTCGATGCGATGGCGAA+AGG | - | chr6_3:94023161-94023180 | Msa0966070:CDS | 60.0% | |
| !! | AGTGGCACCGGTGTTGAAGG+TGG | - | chr6_3:94023214-94023233 | Msa0966070:CDS | 60.0% |
| ! | ACCGGTGTTGAAGGTGGTGG+TGG | - | chr6_3:94023220-94023239 | Msa0966070:CDS | 60.0% |
| GCCACCACCACCTTCAACAC+CGG | + | chr6_3:94023224-94023243 | None:intergenic | 60.0% | |
| GGTGGCAAAAGGAGGACCGA+TGG | - | chr6_3:94023238-94023257 | Msa0966070:CDS | 60.0% | |
| !! | GTGGTGGTGGGGAAAGGAGA+AGG | - | chr6_3:94023269-94023288 | Msa0966070:CDS | 60.0% |
| !! | AGTTGGTGGTGGTGGCAACG+AGG | - | chr6_3:94023318-94023337 | Msa0966070:CDS | 60.0% |
| ! | AACGAGGCTGCAGATGGTGG+TGG | - | chr6_3:94023334-94023353 | Msa0966070:CDS | 60.0% |
| ! | GGTGTTGAAGTTGGCGGTGG+CGG | - | chr6_3:94023373-94023392 | Msa0966070:CDS | 60.0% |
| ! | ACCGGAGCTAAAGGTGGTGG+TGG | - | chr6_3:94023400-94023419 | Msa0966070:CDS | 60.0% |
| ! | GCCACCACCACCTTTAGCTC+CGG | + | chr6_3:94023404-94023423 | None:intergenic | 60.0% |
| GGTGGCGAAAGGAAGACCGA+TGG | - | chr6_3:94023418-94023437 | Msa0966070:CDS | 60.0% | |
| !! | GTGGTGGTGGGGAAAGGAGA+AGG | - | chr6_3:94023269-94023288 | Msa0966070:CDS | 60.0% |
| ACCGCCGCCAACTTCAACCA+TGG | + | chr6_3:94023491-94023510 | None:intergenic | 60.0% | |
| ATGGTTGAAGTTGGCGGCGG+TGG | - | chr6_3:94023490-94023509 | Msa0966070:CDS | 60.0% | |
| GGCGGTGGAGATGTACATGG+TGG | - | chr6_3:94023565-94023584 | Msa0966070:CDS | 60.0% | |
| GTTAGCGGTGGCAGTGGCAC+CGG | - | chr6_3:94023202-94023221 | Msa0966070:CDS | 65.0% | |
| !! | GGCAGTGGCACCGGTGTTGA+AGG | - | chr6_3:94023211-94023230 | Msa0966070:CDS | 65.0% |
| !! | GGCACCGGTGTTGAAGGTGG+TGG | - | chr6_3:94023217-94023236 | Msa0966070:CDS | 65.0% |
| GGTGGCAACGAGGCTGCAGA+TGG | - | chr6_3:94023328-94023347 | Msa0966070:CDS | 65.0% | |
| GGCAACGAGGCTGCAGATGG+TGG | - | chr6_3:94023331-94023350 | Msa0966070:CDS | 65.0% | |
| ! | GTTGAAGTTGGCGGTGGCGG+TGG | - | chr6_3:94023376-94023395 | Msa0966070:CDS | 65.0% |
| ! | GGTGGCACCGGAGCTAAAGG+TGG | - | chr6_3:94023394-94023413 | Msa0966070:CDS | 65.0% |
| ! | GGCACCGGAGCTAAAGGTGG+TGG | - | chr6_3:94023397-94023416 | Msa0966070:CDS | 65.0% |
| AGTTGGCGGCGGTGGCAATG+AGG | - | chr6_3:94023498-94023517 | Msa0966070:CDS | 65.0% | |
| ! | GGCGGTGGCACCGGAGCTAA+AGG | - | chr6_3:94023391-94023410 | Msa0966070:CDS | 70.0% |
| ! | GTTGGCGGTGGCGGTGGCAC+CGG | - | chr6_3:94023382-94023401 | Msa0966070:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 94023097 | 94023651 | 94023097 | ID=Msa0966070;Name=Msa0966070 |
| chr6_3 | mRNA | 94023097 | 94023651 | 94023097 | ID=Msa0966070-mRNA-1;Parent=Msa0966070;Name=Msa0966070-mRNA-1;_AED=0.65;_eAED=1.00;_QI=0|-1|0|1|-1|1|1|0|184 |
| chr6_3 | exon | 94023097 | 94023651 | 94023097 | ID=Msa0966070-mRNA-1:exon:17339;Parent=Msa0966070-mRNA-1 |
| chr6_3 | CDS | 94023097 | 94023651 | 94023097 | ID=Msa0966070-mRNA-1:cds;Parent=Msa0966070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
