Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0969130 | XP_013450842.1 | 94.837 | 368 | 15 | 2 | 1 | 365 | 18 | 384 | 0.0 | 672 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0969130 | sp|Q9FL07|ATL46_ARATH | 57.963 | 383 | 125 | 8 | 9 | 370 | 8 | 375 | 4.71e-136 | 395 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0969130 | A0A072U5F9 | 94.837 | 368 | 15 | 2 | 1 | 365 | 18 | 384 | 0.0 | 672 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0869590 | Msa0969130 | 0.861378 | 1.069987e-63 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0969130 | MtrunA17_Chr6g0451161 | 94.837 | 368 | 15 | 2 | 1 | 365 | 18 | 384 | 0.0 | 672 |
Msa0969130 | MtrunA17_Chr5g0413841 | 55.135 | 370 | 139 | 11 | 6 | 358 | 5 | 364 | 2.91e-112 | 332 |
Msa0969130 | MtrunA17_Chr8g0364881 | 55.882 | 306 | 113 | 6 | 51 | 338 | 5 | 306 | 7.46e-105 | 311 |
Msa0969130 | MtrunA17_Chr4g0059281 | 50.779 | 321 | 116 | 10 | 29 | 345 | 24 | 306 | 1.19e-97 | 292 |
Msa0969130 | MtrunA17_Chr4g0073141 | 39.348 | 399 | 149 | 13 | 15 | 338 | 26 | 406 | 2.72e-60 | 202 |
Msa0969130 | MtrunA17_Chr5g0411081 | 38.462 | 143 | 88 | 0 | 43 | 185 | 51 | 193 | 6.51e-28 | 112 |
Msa0969130 | MtrunA17_Chr5g0426781 | 34.054 | 185 | 111 | 3 | 19 | 193 | 24 | 207 | 4.25e-26 | 107 |
Msa0969130 | MtrunA17_Chr3g0133001 | 34.731 | 167 | 103 | 2 | 16 | 182 | 38 | 198 | 3.07e-24 | 102 |
Msa0969130 | MtrunA17_Chr4g0030831 | 37.736 | 159 | 78 | 5 | 54 | 197 | 17 | 169 | 1.33e-23 | 96.3 |
Msa0969130 | MtrunA17_Chr8g0366561 | 36.129 | 155 | 89 | 2 | 39 | 191 | 47 | 193 | 3.18e-23 | 99.4 |
Msa0969130 | MtrunA17_Chr8g0336881 | 37.975 | 158 | 85 | 3 | 31 | 185 | 3 | 150 | 3.42e-23 | 98.6 |
Msa0969130 | MtrunA17_Chr4g0050041 | 33.929 | 168 | 92 | 4 | 38 | 192 | 43 | 204 | 1.32e-22 | 97.8 |
Msa0969130 | MtrunA17_Chr2g0279431 | 35.032 | 157 | 82 | 3 | 46 | 188 | 59 | 209 | 2.52e-21 | 94.4 |
Msa0969130 | MtrunA17_Chr1g0191601 | 34.028 | 144 | 76 | 4 | 46 | 185 | 44 | 172 | 4.57e-21 | 93.6 |
Msa0969130 | MtrunA17_Chr8g0381731 | 45.882 | 85 | 46 | 0 | 114 | 198 | 148 | 232 | 7.49e-21 | 91.7 |
Msa0969130 | MtrunA17_Chr6g0486651 | 31.169 | 154 | 91 | 3 | 31 | 182 | 21 | 161 | 1.40e-20 | 92.0 |
Msa0969130 | MtrunA17_Chr7g0273051 | 30.675 | 163 | 92 | 4 | 27 | 185 | 20 | 165 | 1.47e-20 | 91.7 |
Msa0969130 | MtrunA17_Chr5g0427431 | 48.052 | 77 | 40 | 0 | 106 | 182 | 126 | 202 | 1.55e-20 | 92.4 |
Msa0969130 | MtrunA17_Chr1g0184171 | 35.417 | 192 | 101 | 9 | 4 | 188 | 3 | 178 | 4.46e-20 | 90.1 |
Msa0969130 | MtrunA17_Chr3g0126931 | 29.630 | 189 | 99 | 3 | 64 | 232 | 60 | 234 | 1.56e-19 | 89.0 |
Msa0969130 | MtrunA17_Chr1g0186661 | 34.555 | 191 | 83 | 7 | 15 | 185 | 8 | 176 | 2.79e-19 | 87.8 |
Msa0969130 | MtrunA17_Chr3g0132491 | 30.822 | 146 | 83 | 3 | 43 | 185 | 51 | 181 | 3.91e-19 | 87.8 |
Msa0969130 | MtrunA17_Chr5g0426881 | 30.380 | 158 | 94 | 3 | 31 | 185 | 44 | 188 | 8.03e-19 | 87.0 |
Msa0969130 | MtrunA17_Chr8g0345361 | 51.316 | 76 | 28 | 2 | 111 | 182 | 89 | 159 | 1.62e-18 | 84.0 |
Msa0969130 | MtrunA17_Chr5g0426871 | 34.667 | 150 | 84 | 3 | 39 | 185 | 44 | 182 | 3.73e-18 | 85.1 |
Msa0969130 | MtrunA17_Chr4g0067591 | 48.649 | 74 | 36 | 1 | 114 | 187 | 80 | 151 | 3.95e-18 | 83.6 |
Msa0969130 | MtrunA17_Chr3g0123641 | 35.172 | 145 | 76 | 4 | 56 | 196 | 1 | 131 | 7.68e-18 | 82.0 |
Msa0969130 | MtrunA17_Chr3g0118061 | 38.043 | 92 | 55 | 1 | 101 | 190 | 63 | 154 | 8.15e-18 | 81.6 |
Msa0969130 | MtrunA17_Chr7g0246761 | 41.772 | 79 | 45 | 1 | 109 | 186 | 58 | 136 | 8.54e-18 | 80.9 |
Msa0969130 | MtrunA17_Chr3g0118071 | 36.957 | 92 | 56 | 1 | 101 | 190 | 63 | 154 | 1.22e-17 | 80.9 |
Msa0969130 | MtrunA17_Chr2g0301871 | 54.545 | 66 | 27 | 1 | 123 | 185 | 63 | 128 | 1.97e-17 | 82.0 |
Msa0969130 | MtrunA17_Chr6g0470751 | 28.402 | 169 | 101 | 3 | 31 | 196 | 31 | 182 | 2.30e-17 | 82.0 |
Msa0969130 | MtrunA17_Chr3g0123631 | 35.821 | 134 | 68 | 4 | 56 | 185 | 1 | 120 | 2.82e-17 | 79.3 |
Msa0969130 | MtrunA17_Chr1g0167811 | 30.496 | 141 | 83 | 3 | 49 | 182 | 33 | 165 | 2.97e-17 | 81.6 |
Msa0969130 | MtrunA17_Chr6g0451051 | 45.070 | 71 | 39 | 0 | 115 | 185 | 41 | 111 | 5.95e-17 | 77.4 |
Msa0969130 | MtrunA17_Chr4g0013561 | 38.776 | 98 | 47 | 2 | 88 | 185 | 71 | 155 | 6.28e-17 | 79.0 |
Msa0969130 | MtrunA17_Chr7g0244851 | 42.045 | 88 | 49 | 2 | 105 | 191 | 72 | 158 | 6.89e-17 | 77.8 |
Msa0969130 | MtrunA17_Chr8g0350741 | 43.902 | 82 | 35 | 2 | 111 | 186 | 59 | 135 | 6.95e-17 | 77.8 |
Msa0969130 | MtrunA17_Chr3g0128771 | 34.058 | 138 | 70 | 5 | 51 | 185 | 45 | 164 | 8.12e-17 | 77.8 |
Msa0969130 | MtrunA17_Chr7g0274741 | 46.667 | 75 | 37 | 1 | 114 | 185 | 70 | 144 | 9.29e-17 | 77.4 |
Msa0969130 | MtrunA17_Chr3g0113811 | 31.915 | 141 | 78 | 3 | 52 | 188 | 28 | 154 | 1.01e-16 | 77.4 |
Msa0969130 | MtrunA17_Chr5g0407431 | 28.313 | 166 | 88 | 4 | 26 | 185 | 10 | 150 | 1.24e-16 | 78.2 |
Msa0969130 | MtrunA17_Chr1g0203541 | 40.506 | 79 | 42 | 1 | 112 | 185 | 103 | 181 | 1.32e-16 | 77.8 |
Msa0969130 | MtrunA17_Chr7g0261091 | 33.784 | 148 | 78 | 4 | 51 | 188 | 11 | 148 | 2.46e-16 | 79.0 |
Msa0969130 | MtrunA17_Chr7g0274711 | 46.667 | 75 | 37 | 1 | 114 | 185 | 67 | 141 | 2.77e-16 | 76.3 |
Msa0969130 | MtrunA17_Chr1g0184631 | 33.103 | 145 | 79 | 4 | 53 | 185 | 4 | 142 | 3.31e-16 | 75.9 |
Msa0969130 | MtrunA17_Chr7g0276591 | 33.557 | 149 | 77 | 5 | 42 | 185 | 15 | 146 | 4.13e-16 | 77.8 |
Msa0969130 | MtrunA17_Chr2g0325161 | 42.045 | 88 | 43 | 2 | 106 | 186 | 83 | 169 | 6.74e-16 | 76.6 |
Msa0969130 | MtrunA17_Chr2g0325141 | 33.566 | 143 | 81 | 5 | 51 | 186 | 2 | 137 | 8.38e-16 | 73.9 |
Msa0969130 | MtrunA17_Chr4g0027761 | 43.421 | 76 | 40 | 2 | 114 | 189 | 100 | 172 | 9.04e-16 | 75.1 |
Msa0969130 | MtrunA17_Chr1g0198201 | 41.892 | 74 | 42 | 1 | 114 | 186 | 61 | 134 | 1.75e-15 | 75.1 |
Msa0969130 | MtrunA17_Chr8g0370171 | 28.750 | 160 | 81 | 5 | 31 | 183 | 8 | 141 | 2.28e-15 | 74.3 |
Msa0969130 | MtrunA17_Chr2g0295571 | 31.618 | 136 | 86 | 2 | 54 | 186 | 34 | 165 | 2.47e-15 | 75.9 |
Msa0969130 | MtrunA17_Chr2g0307411 | 35.821 | 134 | 64 | 6 | 58 | 188 | 34 | 148 | 2.60e-15 | 73.9 |
Msa0969130 | MtrunA17_Chr3g0105441 | 31.169 | 154 | 77 | 4 | 111 | 260 | 99 | 227 | 3.35e-15 | 74.7 |
Msa0969130 | MtrunA17_Chr8g0347461 | 52.778 | 72 | 31 | 2 | 117 | 185 | 114 | 185 | 3.67e-15 | 75.1 |
Msa0969130 | MtrunA17_Chr8g0388201 | 40.816 | 98 | 48 | 2 | 96 | 183 | 293 | 390 | 4.09e-15 | 76.3 |
Msa0969130 | MtrunA17_Chr2g0327791 | 46.667 | 75 | 38 | 1 | 110 | 182 | 103 | 177 | 4.57e-15 | 73.6 |
Msa0969130 | MtrunA17_Chr7g0248831 | 40.000 | 75 | 39 | 2 | 114 | 184 | 80 | 152 | 4.97e-15 | 72.8 |
Msa0969130 | MtrunA17_Chr7g0274721 | 47.143 | 70 | 36 | 1 | 114 | 183 | 68 | 136 | 5.94e-15 | 72.4 |
Msa0969130 | MtrunA17_Chr8g0348151 | 40.845 | 71 | 40 | 1 | 114 | 184 | 90 | 158 | 7.78e-15 | 72.8 |
Msa0969130 | MtrunA17_Chr3g0143301 | 40.476 | 84 | 47 | 1 | 112 | 195 | 46 | 126 | 9.54e-15 | 70.5 |
Msa0969130 | MtrunA17_Chr5g0433861 | 28.834 | 163 | 101 | 4 | 29 | 187 | 2 | 153 | 1.41e-14 | 73.6 |
Msa0969130 | MtrunA17_Chr7g0248841 | 38.158 | 76 | 43 | 2 | 114 | 185 | 74 | 149 | 1.55e-14 | 70.9 |
Msa0969130 | MtrunA17_Chr2g0297011 | 41.558 | 77 | 45 | 0 | 112 | 188 | 74 | 150 | 2.55e-14 | 70.1 |
Msa0969130 | MtrunA17_Chr5g0409201 | 27.857 | 140 | 80 | 3 | 50 | 184 | 14 | 137 | 3.51e-14 | 69.7 |
Msa0969130 | MtrunA17_Chr3g0144241 | 61.702 | 47 | 18 | 0 | 139 | 185 | 103 | 149 | 6.39e-14 | 69.7 |
Msa0969130 | MtrunA17_Chr7g0274731 | 61.364 | 44 | 17 | 0 | 140 | 183 | 114 | 157 | 9.42e-14 | 69.3 |
Msa0969130 | MtrunA17_Chr5g0396611 | 32.500 | 160 | 96 | 3 | 26 | 183 | 234 | 383 | 1.10e-13 | 71.6 |
Msa0969130 | MtrunA17_Chr3g0129671 | 59.574 | 47 | 19 | 0 | 139 | 185 | 135 | 181 | 1.13e-13 | 69.7 |
Msa0969130 | MtrunA17_Chr3g0120011 | 44.444 | 81 | 44 | 1 | 115 | 195 | 95 | 174 | 1.33e-13 | 69.3 |
Msa0969130 | MtrunA17_Chr3g0081611 | 30.323 | 155 | 96 | 5 | 34 | 182 | 2 | 150 | 1.57e-13 | 68.2 |
Msa0969130 | MtrunA17_Chr8g0383931 | 57.447 | 47 | 20 | 0 | 139 | 185 | 140 | 186 | 1.74e-13 | 69.3 |
Msa0969130 | MtrunA17_Chr4g0052671 | 41.026 | 78 | 44 | 1 | 112 | 187 | 76 | 153 | 1.92e-13 | 67.4 |
Msa0969130 | MtrunA17_Chr3g0117821 | 30.769 | 130 | 81 | 2 | 55 | 182 | 5 | 127 | 2.13e-13 | 67.4 |
Msa0969130 | MtrunA17_Chr8g0383901 | 57.447 | 47 | 20 | 0 | 139 | 185 | 130 | 176 | 2.29e-13 | 68.9 |
Msa0969130 | MtrunA17_Chr5g0396601 | 32.824 | 131 | 80 | 2 | 55 | 183 | 269 | 393 | 2.87e-13 | 70.5 |
Msa0969130 | MtrunA17_Chr5g0409211 | 27.465 | 142 | 86 | 3 | 47 | 184 | 10 | 138 | 3.41e-13 | 67.4 |
Msa0969130 | MtrunA17_Chr8g0383861 | 38.462 | 78 | 47 | 1 | 109 | 185 | 108 | 185 | 3.54e-13 | 68.6 |
Msa0969130 | MtrunA17_Chr6g0451031 | 52.000 | 50 | 24 | 0 | 139 | 188 | 68 | 117 | 3.66e-13 | 65.9 |
Msa0969130 | MtrunA17_Chr8g0383881 | 55.319 | 47 | 21 | 0 | 139 | 185 | 129 | 175 | 4.72e-13 | 67.8 |
Msa0969130 | MtrunA17_Chr6g0451041 | 50.847 | 59 | 26 | 2 | 125 | 182 | 4 | 60 | 8.59e-13 | 63.9 |
Msa0969130 | MtrunA17_Chr8g0383871 | 39.726 | 73 | 43 | 1 | 114 | 185 | 112 | 184 | 9.97e-13 | 67.0 |
Msa0969130 | MtrunA17_Chr8g0383921 | 38.667 | 75 | 45 | 1 | 112 | 185 | 109 | 183 | 1.19e-12 | 66.6 |
Msa0969130 | MtrunA17_Chr7g0269491 | 41.892 | 74 | 41 | 1 | 115 | 186 | 67 | 140 | 1.25e-12 | 66.2 |
Msa0969130 | MtrunA17_Chr5g0444161 | 40.845 | 71 | 40 | 1 | 114 | 182 | 157 | 227 | 2.27e-12 | 66.2 |
Msa0969130 | MtrunA17_Chr8g0369571 | 56.818 | 44 | 19 | 0 | 140 | 183 | 90 | 133 | 2.31e-12 | 65.1 |
Msa0969130 | MtrunA17_Chr5g0396591 | 34.400 | 125 | 77 | 2 | 60 | 182 | 161 | 282 | 2.48e-12 | 67.0 |
Msa0969130 | MtrunA17_Chr5g0437361 | 36.364 | 77 | 47 | 1 | 114 | 188 | 75 | 151 | 2.71e-12 | 64.7 |
Msa0969130 | MtrunA17_Chr8g0366521 | 27.219 | 169 | 92 | 5 | 29 | 185 | 2 | 151 | 3.69e-12 | 66.6 |
Msa0969130 | MtrunA17_Chr8g0387291 | 49.206 | 63 | 29 | 2 | 121 | 182 | 69 | 129 | 4.25e-12 | 63.9 |
Msa0969130 | MtrunA17_Chr8g0383941 | 36.000 | 75 | 47 | 1 | 112 | 185 | 105 | 179 | 5.08e-12 | 64.7 |
Msa0969130 | MtrunA17_Chr5g0430781 | 38.889 | 72 | 41 | 1 | 114 | 185 | 87 | 155 | 5.42e-12 | 64.7 |
Msa0969130 | MtrunA17_Chr7g0275601 | 41.333 | 75 | 38 | 2 | 114 | 182 | 76 | 150 | 8.80e-12 | 63.2 |
Msa0969130 | MtrunA17_Chr8g0345381 | 41.509 | 53 | 31 | 0 | 140 | 192 | 53 | 105 | 9.21e-12 | 62.8 |
Msa0969130 | MtrunA17_Chr8g0388231 | 41.860 | 86 | 46 | 2 | 114 | 197 | 309 | 392 | 9.67e-12 | 65.9 |
Msa0969130 | MtrunA17_Chr1g0157091 | 37.975 | 79 | 46 | 1 | 112 | 190 | 46 | 121 | 1.40e-11 | 61.6 |
Msa0969130 | MtrunA17_Chr3g0118101 | 35.526 | 76 | 48 | 1 | 114 | 188 | 87 | 162 | 2.19e-11 | 62.4 |
Msa0969130 | MtrunA17_Chr1g0150571 | 26.950 | 141 | 91 | 3 | 65 | 194 | 147 | 286 | 2.59e-11 | 63.9 |
Msa0969130 | MtrunA17_Chr3g0126611 | 36.842 | 76 | 46 | 1 | 109 | 182 | 298 | 373 | 2.63e-11 | 64.7 |
Msa0969130 | MtrunA17_Chr8g0348551 | 39.241 | 79 | 42 | 2 | 123 | 200 | 75 | 148 | 2.80e-11 | 61.6 |
Msa0969130 | MtrunA17_Chr5g0444141 | 39.437 | 71 | 41 | 1 | 114 | 182 | 192 | 262 | 3.12e-11 | 63.5 |
Msa0969130 | MtrunA17_Chr8g0371291 | 37.037 | 81 | 46 | 2 | 103 | 182 | 146 | 222 | 3.17e-11 | 62.8 |
Msa0969130 | MtrunA17_Chr5g0406031 | 31.783 | 129 | 77 | 4 | 60 | 182 | 108 | 231 | 3.43e-11 | 62.8 |
Msa0969130 | MtrunA17_Chr1g0177041 | 39.130 | 92 | 45 | 4 | 96 | 182 | 60 | 145 | 3.97e-11 | 61.2 |
Msa0969130 | MtrunA17_Chr4g0010171 | 29.940 | 167 | 92 | 7 | 39 | 200 | 30 | 176 | 4.46e-11 | 61.6 |
Msa0969130 | MtrunA17_Chr4g0065171 | 35.616 | 73 | 42 | 3 | 117 | 185 | 458 | 529 | 6.26e-11 | 63.9 |
Msa0969130 | MtrunA17_Chr8g0345401 | 45.652 | 46 | 25 | 0 | 140 | 185 | 49 | 94 | 7.55e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0969130 | AT5G40250.1 | 57.963 | 383 | 125 | 8 | 9 | 370 | 8 | 375 | 4.79e-137 | 395 |
Msa0969130 | AT1G23980.1 | 56.856 | 299 | 105 | 6 | 44 | 336 | 46 | 326 | 1.71e-93 | 284 |
Msa0969130 | AT2G18650.1 | 41.124 | 338 | 152 | 14 | 41 | 343 | 33 | 358 | 7.94e-57 | 191 |
Msa0969130 | AT3G48030.2 | 41.111 | 270 | 138 | 6 | 24 | 292 | 16 | 265 | 1.57e-52 | 176 |
Msa0969130 | AT3G48030.1 | 41.481 | 270 | 137 | 7 | 24 | 292 | 94 | 343 | 6.22e-52 | 176 |
Msa0969130 | AT4G30400.1 | 39.365 | 315 | 131 | 9 | 83 | 340 | 79 | 390 | 1.56e-50 | 176 |
Msa0969130 | AT5G57750.1 | 54.745 | 137 | 57 | 3 | 47 | 182 | 32 | 164 | 4.08e-44 | 152 |
Msa0969130 | AT4G40070.1 | 35.028 | 177 | 87 | 6 | 37 | 209 | 32 | 184 | 3.75e-24 | 101 |
Msa0969130 | AT3G03550.1 | 36.184 | 152 | 81 | 3 | 49 | 187 | 58 | 206 | 2.59e-23 | 100 |
Msa0969130 | AT1G35330.1 | 31.548 | 168 | 100 | 3 | 35 | 199 | 33 | 188 | 3.76e-23 | 99.0 |
Msa0969130 | AT1G72200.1 | 33.108 | 148 | 85 | 2 | 41 | 185 | 53 | 189 | 7.61e-23 | 99.4 |
Msa0969130 | AT1G72220.1 | 36.364 | 154 | 88 | 4 | 39 | 185 | 72 | 222 | 1.03e-22 | 99.0 |
Msa0969130 | AT5G17600.1 | 36.364 | 132 | 79 | 1 | 52 | 183 | 59 | 185 | 1.07e-22 | 98.2 |
Msa0969130 | AT2G20030.1 | 34.395 | 157 | 91 | 3 | 33 | 185 | 21 | 169 | 1.24e-22 | 98.6 |
Msa0969130 | AT5G05810.1 | 53.521 | 71 | 33 | 0 | 112 | 182 | 118 | 188 | 9.66e-22 | 96.3 |
Msa0969130 | AT2G35000.1 | 36.429 | 140 | 77 | 3 | 54 | 188 | 51 | 183 | 4.96e-21 | 94.0 |
Msa0969130 | AT1G22500.1 | 34.028 | 144 | 79 | 3 | 45 | 185 | 33 | 163 | 1.08e-20 | 92.8 |
Msa0969130 | AT4G28890.1 | 44.554 | 101 | 46 | 2 | 113 | 205 | 96 | 194 | 1.14e-20 | 93.2 |
Msa0969130 | AT4G09110.1 | 42.574 | 101 | 53 | 3 | 105 | 200 | 84 | 184 | 2.18e-20 | 90.9 |
Msa0969130 | AT2G34990.2 | 33.333 | 165 | 92 | 5 | 25 | 185 | 13 | 163 | 3.48e-20 | 90.5 |
Msa0969130 | AT2G47560.1 | 36.957 | 138 | 67 | 3 | 51 | 186 | 35 | 154 | 8.70e-20 | 87.4 |
Msa0969130 | AT4G33565.1 | 48.101 | 79 | 41 | 0 | 107 | 185 | 184 | 262 | 1.01e-19 | 89.7 |
Msa0969130 | AT5G46650.1 | 34.146 | 164 | 97 | 6 | 30 | 189 | 8 | 164 | 1.04e-19 | 88.6 |
Msa0969130 | AT2G34990.1 | 34.615 | 156 | 85 | 5 | 46 | 195 | 9 | 153 | 1.09e-19 | 89.0 |
Msa0969130 | AT4G17905.1 | 29.775 | 178 | 106 | 4 | 16 | 185 | 34 | 200 | 1.17e-19 | 89.0 |
Msa0969130 | AT3G60220.1 | 52.113 | 71 | 31 | 1 | 118 | 185 | 92 | 162 | 1.53e-19 | 89.0 |
Msa0969130 | AT5G10380.1 | 54.286 | 70 | 32 | 0 | 114 | 183 | 109 | 178 | 2.78e-19 | 87.8 |
Msa0969130 | AT4G09130.1 | 42.857 | 91 | 48 | 2 | 114 | 200 | 91 | 181 | 3.97e-19 | 88.2 |
Msa0969130 | AT4G17905.2 | 29.775 | 178 | 106 | 4 | 16 | 185 | 60 | 226 | 4.34e-19 | 87.8 |
Msa0969130 | AT1G04360.1 | 33.548 | 155 | 89 | 4 | 38 | 185 | 32 | 179 | 1.39e-18 | 86.7 |
Msa0969130 | AT3G05200.1 | 32.258 | 155 | 84 | 5 | 46 | 193 | 44 | 184 | 1.42e-18 | 87.0 |
Msa0969130 | AT5G43420.1 | 43.182 | 88 | 36 | 1 | 109 | 182 | 93 | 180 | 1.74e-18 | 86.3 |
Msa0969130 | AT3G16720.1 | 50.000 | 74 | 36 | 1 | 114 | 187 | 94 | 166 | 1.95e-18 | 85.1 |
Msa0969130 | AT2G35420.1 | 30.864 | 162 | 91 | 4 | 30 | 185 | 2 | 148 | 2.09e-18 | 84.3 |
Msa0969130 | AT1G53820.1 | 46.053 | 76 | 40 | 1 | 110 | 185 | 91 | 165 | 2.32e-18 | 85.1 |
Msa0969130 | AT4G09120.1 | 33.544 | 158 | 73 | 5 | 36 | 185 | 35 | 168 | 2.73e-18 | 85.5 |
Msa0969130 | AT2G42350.1 | 42.553 | 94 | 42 | 3 | 114 | 199 | 75 | 164 | 2.11e-17 | 80.5 |
Msa0969130 | AT2G42360.1 | 31.544 | 149 | 87 | 3 | 39 | 186 | 20 | 154 | 9.84e-17 | 79.3 |
Msa0969130 | AT4G15975.1 | 30.534 | 131 | 77 | 3 | 114 | 233 | 51 | 178 | 1.14e-16 | 79.0 |
Msa0969130 | AT1G76410.1 | 33.113 | 151 | 85 | 3 | 36 | 185 | 14 | 149 | 1.21e-16 | 77.8 |
Msa0969130 | AT3G18930.2 | 45.122 | 82 | 35 | 1 | 114 | 185 | 120 | 201 | 1.22e-16 | 81.3 |
Msa0969130 | AT3G18930.3 | 45.122 | 82 | 35 | 1 | 114 | 185 | 120 | 201 | 1.22e-16 | 81.3 |
Msa0969130 | AT3G18930.1 | 45.122 | 82 | 35 | 1 | 114 | 185 | 120 | 201 | 1.22e-16 | 81.3 |
Msa0969130 | AT4G10160.1 | 29.932 | 147 | 88 | 2 | 39 | 185 | 11 | 142 | 2.75e-16 | 77.8 |
Msa0969130 | AT3G62690.1 | 32.117 | 137 | 80 | 3 | 51 | 186 | 35 | 159 | 3.39e-16 | 78.2 |
Msa0969130 | AT1G20823.1 | 46.667 | 75 | 39 | 1 | 112 | 185 | 82 | 156 | 5.12e-16 | 76.3 |
Msa0969130 | AT1G72310.1 | 42.105 | 76 | 43 | 1 | 110 | 185 | 98 | 172 | 9.25e-16 | 77.8 |
Msa0969130 | AT5G01880.1 | 42.466 | 73 | 42 | 0 | 113 | 185 | 78 | 150 | 1.20e-15 | 74.3 |
Msa0969130 | AT4G17920.1 | 30.189 | 159 | 101 | 4 | 32 | 185 | 2 | 155 | 1.22e-15 | 77.0 |
Msa0969130 | AT2G27940.1 | 31.034 | 174 | 95 | 8 | 48 | 208 | 48 | 209 | 2.19e-15 | 75.5 |
Msa0969130 | AT4G09100.1 | 44.737 | 76 | 37 | 2 | 114 | 185 | 56 | 130 | 3.12e-15 | 72.4 |
Msa0969130 | AT2G46160.1 | 40.506 | 79 | 39 | 1 | 114 | 184 | 104 | 182 | 4.91e-15 | 73.9 |
Msa0969130 | AT2G46160.2 | 40.506 | 79 | 39 | 1 | 114 | 184 | 104 | 182 | 4.91e-15 | 73.9 |
Msa0969130 | AT3G61550.1 | 39.024 | 82 | 39 | 2 | 114 | 184 | 99 | 180 | 8.90e-15 | 73.2 |
Msa0969130 | AT3G10910.1 | 41.096 | 73 | 43 | 0 | 113 | 185 | 87 | 159 | 1.08e-14 | 72.0 |
Msa0969130 | AT1G33480.1 | 44.444 | 72 | 39 | 1 | 114 | 185 | 75 | 145 | 1.29e-14 | 73.6 |
Msa0969130 | AT4G35480.1 | 57.447 | 47 | 20 | 0 | 139 | 185 | 112 | 158 | 1.68e-14 | 72.0 |
Msa0969130 | AT5G27420.1 | 43.421 | 76 | 38 | 2 | 114 | 185 | 95 | 169 | 2.44e-14 | 73.9 |
Msa0969130 | AT2G35910.1 | 46.377 | 69 | 37 | 0 | 114 | 182 | 121 | 189 | 2.71e-14 | 71.6 |
Msa0969130 | AT3G14320.1 | 32.061 | 131 | 77 | 3 | 52 | 182 | 12 | 130 | 3.64e-14 | 71.2 |
Msa0969130 | AT5G05280.1 | 40.278 | 72 | 42 | 1 | 114 | 185 | 88 | 158 | 4.88e-14 | 70.1 |
Msa0969130 | AT1G49220.1 | 32.593 | 135 | 65 | 4 | 54 | 185 | 69 | 180 | 5.06e-14 | 71.6 |
Msa0969130 | AT4G10150.1 | 43.056 | 72 | 40 | 1 | 114 | 185 | 86 | 156 | 9.94e-14 | 70.5 |
Msa0969130 | AT5G07040.1 | 36.986 | 73 | 44 | 1 | 114 | 184 | 66 | 138 | 1.48e-13 | 68.2 |
Msa0969130 | AT2G17450.1 | 51.064 | 47 | 23 | 0 | 139 | 185 | 101 | 147 | 8.08e-13 | 67.0 |
Msa0969130 | AT2G18670.1 | 43.243 | 74 | 41 | 1 | 114 | 186 | 83 | 156 | 1.20e-12 | 66.2 |
Msa0969130 | AT3G18773.1 | 29.452 | 146 | 70 | 4 | 51 | 185 | 52 | 175 | 1.46e-12 | 67.0 |
Msa0969130 | AT5G53110.1 | 34.328 | 134 | 76 | 3 | 57 | 184 | 247 | 374 | 2.02e-12 | 68.2 |
Msa0969130 | AT1G32361.1 | 36.905 | 84 | 50 | 2 | 114 | 196 | 130 | 211 | 2.18e-12 | 67.8 |
Msa0969130 | AT3G19140.1 | 34.831 | 89 | 57 | 1 | 98 | 186 | 38 | 125 | 3.69e-12 | 63.9 |
Msa0969130 | AT1G49230.1 | 53.191 | 47 | 22 | 0 | 139 | 185 | 130 | 176 | 6.43e-12 | 65.1 |
Msa0969130 | AT4G24015.1 | 43.478 | 69 | 38 | 1 | 121 | 189 | 87 | 154 | 6.48e-12 | 63.9 |
Msa0969130 | AT1G28040.1 | 27.451 | 153 | 95 | 6 | 35 | 184 | 158 | 297 | 8.15e-12 | 65.9 |
Msa0969130 | AT1G49210.1 | 37.662 | 77 | 43 | 2 | 112 | 185 | 106 | 180 | 9.51e-12 | 64.7 |
Msa0969130 | AT1G49200.1 | 36.364 | 77 | 44 | 2 | 112 | 185 | 107 | 181 | 1.23e-11 | 64.3 |
Msa0969130 | AT2G46493.1 | 39.189 | 74 | 41 | 2 | 114 | 184 | 110 | 182 | 1.70e-11 | 63.2 |
Msa0969130 | AT2G46494.1 | 27.612 | 134 | 87 | 4 | 54 | 184 | 234 | 360 | 3.22e-11 | 64.7 |
Msa0969130 | AT4G11360.1 | 37.500 | 96 | 47 | 4 | 91 | 183 | 45 | 130 | 3.47e-11 | 61.6 |
Msa0969130 | AT1G71980.1 | 41.558 | 77 | 42 | 3 | 114 | 188 | 205 | 280 | 3.55e-11 | 64.7 |
Msa0969130 | AT5G58580.1 | 43.056 | 72 | 40 | 1 | 112 | 182 | 109 | 180 | 3.62e-11 | 63.9 |
Msa0969130 | AT1G22670.1 | 38.462 | 78 | 45 | 3 | 114 | 189 | 205 | 281 | 5.46e-11 | 63.9 |
Msa0969130 | AT2G44578.1 | 50.000 | 46 | 23 | 0 | 140 | 185 | 70 | 115 | 5.61e-11 | 60.5 |
Msa0969130 | AT5G41450.1 | 29.560 | 159 | 99 | 5 | 35 | 185 | 2 | 155 | 5.75e-11 | 61.2 |
Msa0969130 | AT2G46495.2 | 37.333 | 75 | 44 | 1 | 113 | 184 | 262 | 336 | 6.24e-11 | 63.5 |
Msa0969130 | AT4G30370.1 | 38.889 | 72 | 44 | 0 | 111 | 182 | 86 | 157 | 6.99e-11 | 61.2 |
Msa0969130 | AT2G46495.1 | 37.333 | 75 | 44 | 1 | 113 | 184 | 290 | 364 | 8.16e-11 | 63.5 |
Msa0969130 | AT2G37580.1 | 54.545 | 44 | 20 | 0 | 139 | 182 | 141 | 184 | 9.28e-11 | 62.0 |
Find 63 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGGCCATAACCAAATTT+TGG | 0.157592 | 6_4:+563191 | None:intergenic |
TATTCGATTTCGATGATCTT+AGG | 0.158395 | 6_4:-563587 | Msa0969130:CDS |
AATTCTACTCTCATGGTTTA+AGG | 0.162913 | 6_4:+563317 | None:intergenic |
TGAAACAAGTAGTAGTAATT+TGG | 0.295043 | 6_4:-563406 | Msa0969130:CDS |
CAGAAGTTGAAATTTCATTA+TGG | 0.308233 | 6_4:+563904 | None:intergenic |
TTGAGGAAGTTGTTGATAAA+GGG | 0.310918 | 6_4:-563500 | Msa0969130:CDS |
GTTGAGGAAGTTGTTGATAA+AGG | 0.336638 | 6_4:-563501 | Msa0969130:CDS |
GTTATCAAAGGAATTGAAAA+TGG | 0.356686 | 6_4:-563279 | Msa0969130:CDS |
TTGAATTTCCCGAGTCGAAC+GGG | 0.362653 | 6_4:+563471 | None:intergenic |
TGGTTGGAACTTCGGAGTTA+AGG | 0.363999 | 6_4:-563344 | Msa0969130:CDS |
AACAAAGATTTGCAGAATCA+TGG | 0.368301 | 6_4:-563105 | Msa0969130:CDS |
AGAGGAACACTTCAAACTAA+TGG | 0.369520 | 6_4:-563630 | Msa0969130:CDS |
CTATTTCCAAAATTTGGTTA+TGG | 0.370519 | 6_4:-563197 | Msa0969130:CDS |
TGTAATGGAGAGAATGGATT+TGG | 0.372483 | 6_4:-563546 | Msa0969130:CDS |
GGTTGGAACTTCGGAGTTAA+GGG | 0.398653 | 6_4:-563343 | Msa0969130:CDS |
AGTTCTTTAGAAGCTCATAA+TGG | 0.409499 | 6_4:-563150 | Msa0969130:CDS |
ATTCGATTTCGATGATCTTA+GGG | 0.431362 | 6_4:-563586 | Msa0969130:CDS |
ATATAAGTTGTATAGATACT+TGG | 0.434910 | 6_4:-563683 | Msa0969130:CDS |
AAATGGTGTTGAGAGTGATT+TGG | 0.437072 | 6_4:-563262 | Msa0969130:CDS |
AAATCTTTGTTAAGATATGA+TGG | 0.460353 | 6_4:+563117 | None:intergenic |
TTTCAATTCAAGGAGATTGT+TGG | 0.461922 | 6_4:-563798 | Msa0969130:CDS |
GTAGAATTCATCATGATACT+AGG | 0.465386 | 6_4:-563302 | Msa0969130:CDS |
TGCAAGAAGATGTTATTCAA+TGG | 0.469008 | 6_4:-563382 | Msa0969130:CDS |
AGATCATCGAAATCGAATAT+CGG | 0.475880 | 6_4:+563591 | None:intergenic |
TTAGAAGAACTTGATGAAGA+TGG | 0.478882 | 6_4:+563939 | None:intergenic |
GCAAGAAGATGTTATTCAAT+GGG | 0.479763 | 6_4:-563381 | Msa0969130:CDS |
AATTTGGTTATGGCCAAGAA+AGG | 0.479921 | 6_4:-563187 | Msa0969130:CDS |
TCAATATGTGGTTGGAACTT+CGG | 0.480148 | 6_4:-563352 | Msa0969130:CDS |
CTTGAATTTCCCGAGTCGAA+CGG | 0.485253 | 6_4:+563470 | None:intergenic |
CATGATGAATTCTACTCTCA+TGG | 0.489369 | 6_4:+563310 | None:intergenic |
AATGGGATCTTATCAATATG+TGG | 0.489833 | 6_4:-563364 | Msa0969130:CDS |
TGTCCTTGTAATGGAGAGAA+TGG | 0.491168 | 6_4:-563552 | Msa0969130:CDS |
AAGATTAGTAATGTTAGTAA+AGG | 0.491990 | 6_4:-563231 | Msa0969130:CDS |
GGTAGAGAGAATGAAGAAGT+AGG | 0.494883 | 6_4:-563429 | Msa0969130:CDS |
CTTGATGAAGATTGTGATGA+TGG | 0.502333 | 6_4:+564110 | None:intergenic |
AAACAAACAGCACAATCAAA+AGG | 0.507813 | 6_4:+563765 | None:intergenic |
ACAAAGATTTGCAGAATCAT+GGG | 0.517329 | 6_4:-563104 | Msa0969130:CDS |
ATTTGGTTATGGCCAAGAAA+GGG | 0.522743 | 6_4:-563186 | Msa0969130:CDS |
ACTATGATGAAAAGAACAGC+TGG | 0.524123 | 6_4:+564029 | None:intergenic |
TACTAGAAGATGAAGATGGT+GGG | 0.528489 | 6_4:+564063 | None:intergenic |
GATGATCTTAGGGAAGATGA+TGG | 0.535942 | 6_4:-563576 | Msa0969130:CDS |
GGATCTTATCAATATGTGGT+TGG | 0.539877 | 6_4:-563360 | Msa0969130:CDS |
TGAGGAAGTTGTTGATAAAG+GGG | 0.540146 | 6_4:-563499 | Msa0969130:CDS |
ATTTGCAGAATCATGGGATG+AGG | 0.541198 | 6_4:-563098 | Msa0969130:CDS |
GATGATGGTTGTCCTTGTAA+TGG | 0.542547 | 6_4:-563561 | Msa0969130:CDS |
TTTAGAAGCTCATAATGGAA+TGG | 0.557904 | 6_4:-563145 | Msa0969130:CDS |
TAGAATTCATCATGATACTA+GGG | 0.559035 | 6_4:-563301 | Msa0969130:CDS |
AAGAAGACGAACGCGGAAGT+CGG | 0.560331 | 6_4:-563450 | Msa0969130:CDS |
AATCCATTCTCTCCATTACA+AGG | 0.564226 | 6_4:+563549 | None:intergenic |
ACTAGAAGATGAAGATGGTG+GGG | 0.564302 | 6_4:+564064 | None:intergenic |
TGAAGTGTTCCTCTACAAAG+AGG | 0.570614 | 6_4:+563639 | None:intergenic |
CATGATACTAGGGTTATCAA+AGG | 0.597107 | 6_4:-563291 | Msa0969130:CDS |
TTAGTACTAGAAGATGAAGA+TGG | 0.602759 | 6_4:+564059 | None:intergenic |
GAAGATTGTGATGATGGTGG+TGG | 0.606961 | 6_4:+564116 | None:intergenic |
TCTACTTGTCCTCTTTGTAG+AGG | 0.612228 | 6_4:-563648 | Msa0969130:CDS |
GTACTAGAAGATGAAGATGG+TGG | 0.612334 | 6_4:+564062 | None:intergenic |
TACAACTTATATGAAAAGCA+TGG | 0.613483 | 6_4:+563694 | None:intergenic |
TTTGCAGAATCATGGGATGA+GGG | 0.613784 | 6_4:-563097 | Msa0969130:CDS |
TGAAAAGCATGGCTACACAT+AGG | 0.613953 | 6_4:+563705 | None:intergenic |
CATGGGATGAGGGAAACAGA+TGG | 0.665117 | 6_4:-563087 | Msa0969130:CDS |
GGTGTTGAGAGTGATTTGGA+AGG | 0.685852 | 6_4:-563258 | Msa0969130:CDS |
GATGAAGATTGTGATGATGG+TGG | 0.694129 | 6_4:+564113 | None:intergenic |
GAAATTCAAGAAGACGAACG+CGG | 0.711225 | 6_4:-563457 | Msa0969130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATCAAATTTATCAAAAAGA+TGG | - | chr6_4:563098-563117 | Msa0969130:CDS | 20.0% |
!! | ATATAAGTTGTATAGATACT+TGG | - | chr6_4:563570-563589 | Msa0969130:CDS | 20.0% |
!! | AAGATTAGTAATGTTAGTAA+AGG | - | chr6_4:564022-564041 | Msa0969130:CDS | 20.0% |
!!! | GTTTTTCTATTTCCAAAATT+TGG | - | chr6_4:564050-564069 | Msa0969130:CDS | 20.0% |
!! | AAATCTTTGTTAAGATATGA+TGG | + | chr6_4:564139-564158 | None:intergenic | 20.0% |
!! | CATCAAATTTATCAAAAAGA+TGG | - | chr6_4:563098-563117 | Msa0969130:CDS | 20.0% |
!! | ATATAAGTTGTATAGATACT+TGG | - | chr6_4:563570-563589 | Msa0969130:CDS | 20.0% |
!! | AAGATTAGTAATGTTAGTAA+AGG | - | chr6_4:564022-564041 | Msa0969130:CDS | 20.0% |
!!! | GTTTTTCTATTTCCAAAATT+TGG | - | chr6_4:564050-564069 | Msa0969130:CDS | 20.0% |
!! | AAATCTTTGTTAAGATATGA+TGG | + | chr6_4:564139-564158 | None:intergenic | 20.0% |
! | CAGAAGTTGAAATTTCATTA+TGG | + | chr6_4:563352-563371 | None:intergenic | 25.0% |
! | TACAACTTATATGAAAAGCA+TGG | + | chr6_4:563562-563581 | None:intergenic | 25.0% |
!! | ACAAAAAGAAATTGTTGTTG+AGG | - | chr6_4:563736-563755 | Msa0969130:CDS | 25.0% |
! | TGAAACAAGTAGTAGTAATT+TGG | - | chr6_4:563847-563866 | Msa0969130:CDS | 25.0% |
! | TAGAATTCATCATGATACTA+GGG | - | chr6_4:563952-563971 | Msa0969130:CDS | 25.0% |
! | GTTATCAAAGGAATTGAAAA+TGG | - | chr6_4:563974-563993 | Msa0969130:CDS | 25.0% |
! | CTATTTCCAAAATTTGGTTA+TGG | - | chr6_4:564056-564075 | Msa0969130:CDS | 25.0% |
! | CAGAAGTTGAAATTTCATTA+TGG | + | chr6_4:563352-563371 | None:intergenic | 25.0% |
! | TACAACTTATATGAAAAGCA+TGG | + | chr6_4:563562-563581 | None:intergenic | 25.0% |
!! | ACAAAAAGAAATTGTTGTTG+AGG | - | chr6_4:563736-563755 | Msa0969130:CDS | 25.0% |
! | TGAAACAAGTAGTAGTAATT+TGG | - | chr6_4:563847-563866 | Msa0969130:CDS | 25.0% |
! | TAGAATTCATCATGATACTA+GGG | - | chr6_4:563952-563971 | Msa0969130:CDS | 25.0% |
! | GTTATCAAAGGAATTGAAAA+TGG | - | chr6_4:563974-563993 | Msa0969130:CDS | 25.0% |
! | CTATTTCCAAAATTTGGTTA+TGG | - | chr6_4:564056-564075 | Msa0969130:CDS | 25.0% |
TTAGTACTAGAAGATGAAGA+TGG | + | chr6_4:563197-563216 | None:intergenic | 30.0% | |
!!! | GCTGTTTTGTTTTTCATATC+TGG | - | chr6_4:563254-563273 | Msa0969130:CDS | 30.0% |
TTAGAAGAACTTGATGAAGA+TGG | + | chr6_4:563317-563336 | None:intergenic | 30.0% | |
!! | CTTTTTCATCTTCATGATTC+TGG | - | chr6_4:563398-563417 | Msa0969130:CDS | 30.0% |
!! | ACTACCTGTTTTTCAATTCA+AGG | - | chr6_4:563445-563464 | Msa0969130:CDS | 30.0% |
ATCTCCTTGAATTGAAAAAC+AGG | + | chr6_4:563452-563471 | None:intergenic | 30.0% | |
TTTCAATTCAAGGAGATTGT+TGG | - | chr6_4:563455-563474 | Msa0969130:CDS | 30.0% | |
AAACAAACAGCACAATCAAA+AGG | + | chr6_4:563491-563510 | None:intergenic | 30.0% | |
AGATCATCGAAATCGAATAT+CGG | + | chr6_4:563665-563684 | None:intergenic | 30.0% | |
TATTCGATTTCGATGATCTT+AGG | - | chr6_4:563666-563685 | Msa0969130:CDS | 30.0% | |
ATTCGATTTCGATGATCTTA+GGG | - | chr6_4:563667-563686 | Msa0969130:CDS | 30.0% | |
! | TTGAGGAAGTTGTTGATAAA+GGG | - | chr6_4:563753-563772 | Msa0969130:CDS | 30.0% |
TGCAAGAAGATGTTATTCAA+TGG | - | chr6_4:563871-563890 | Msa0969130:CDS | 30.0% | |
GCAAGAAGATGTTATTCAAT+GGG | - | chr6_4:563872-563891 | Msa0969130:CDS | 30.0% | |
AATGGGATCTTATCAATATG+TGG | - | chr6_4:563889-563908 | Msa0969130:CDS | 30.0% | |
AATTCTACTCTCATGGTTTA+AGG | + | chr6_4:563939-563958 | None:intergenic | 30.0% | |
GTAGAATTCATCATGATACT+AGG | - | chr6_4:563951-563970 | Msa0969130:CDS | 30.0% | |
! | GAAGAAAATTTTCCCTTTCT+TGG | + | chr6_4:564082-564101 | None:intergenic | 30.0% |
! | AGTTCTTTAGAAGCTCATAA+TGG | - | chr6_4:564103-564122 | Msa0969130:CDS | 30.0% |
! | TTTAGAAGCTCATAATGGAA+TGG | - | chr6_4:564108-564127 | Msa0969130:CDS | 30.0% |
AACAAAGATTTGCAGAATCA+TGG | - | chr6_4:564148-564167 | Msa0969130:CDS | 30.0% | |
ACAAAGATTTGCAGAATCAT+GGG | - | chr6_4:564149-564168 | Msa0969130:CDS | 30.0% | |
TTAGTACTAGAAGATGAAGA+TGG | + | chr6_4:563197-563216 | None:intergenic | 30.0% | |
!!! | GCTGTTTTGTTTTTCATATC+TGG | - | chr6_4:563254-563273 | Msa0969130:CDS | 30.0% |
TTAGAAGAACTTGATGAAGA+TGG | + | chr6_4:563317-563336 | None:intergenic | 30.0% | |
!! | CTTTTTCATCTTCATGATTC+TGG | - | chr6_4:563398-563417 | Msa0969130:CDS | 30.0% |
!! | ACTACCTGTTTTTCAATTCA+AGG | - | chr6_4:563445-563464 | Msa0969130:CDS | 30.0% |
ATCTCCTTGAATTGAAAAAC+AGG | + | chr6_4:563452-563471 | None:intergenic | 30.0% | |
TTTCAATTCAAGGAGATTGT+TGG | - | chr6_4:563455-563474 | Msa0969130:CDS | 30.0% | |
AAACAAACAGCACAATCAAA+AGG | + | chr6_4:563491-563510 | None:intergenic | 30.0% | |
AGATCATCGAAATCGAATAT+CGG | + | chr6_4:563665-563684 | None:intergenic | 30.0% | |
TATTCGATTTCGATGATCTT+AGG | - | chr6_4:563666-563685 | Msa0969130:CDS | 30.0% | |
ATTCGATTTCGATGATCTTA+GGG | - | chr6_4:563667-563686 | Msa0969130:CDS | 30.0% | |
! | TTGAGGAAGTTGTTGATAAA+GGG | - | chr6_4:563753-563772 | Msa0969130:CDS | 30.0% |
TGCAAGAAGATGTTATTCAA+TGG | - | chr6_4:563871-563890 | Msa0969130:CDS | 30.0% | |
GCAAGAAGATGTTATTCAAT+GGG | - | chr6_4:563872-563891 | Msa0969130:CDS | 30.0% | |
AATGGGATCTTATCAATATG+TGG | - | chr6_4:563889-563908 | Msa0969130:CDS | 30.0% | |
AATTCTACTCTCATGGTTTA+AGG | + | chr6_4:563939-563958 | None:intergenic | 30.0% | |
GTAGAATTCATCATGATACT+AGG | - | chr6_4:563951-563970 | Msa0969130:CDS | 30.0% | |
! | GAAGAAAATTTTCCCTTTCT+TGG | + | chr6_4:564082-564101 | None:intergenic | 30.0% |
! | AGTTCTTTAGAAGCTCATAA+TGG | - | chr6_4:564103-564122 | Msa0969130:CDS | 30.0% |
! | TTTAGAAGCTCATAATGGAA+TGG | - | chr6_4:564108-564127 | Msa0969130:CDS | 30.0% |
AACAAAGATTTGCAGAATCA+TGG | - | chr6_4:564148-564167 | Msa0969130:CDS | 30.0% | |
ACAAAGATTTGCAGAATCAT+GGG | - | chr6_4:564149-564168 | Msa0969130:CDS | 30.0% | |
CTTGATGAAGATTGTGATGA+TGG | + | chr6_4:563146-563165 | None:intergenic | 35.0% | |
TACTAGAAGATGAAGATGGT+GGG | + | chr6_4:563193-563212 | None:intergenic | 35.0% | |
ACTATGATGAAAAGAACAGC+TGG | + | chr6_4:563227-563246 | None:intergenic | 35.0% | |
! | AGCTGTTCTTTTCATCATAG+TGG | - | chr6_4:563226-563245 | Msa0969130:CDS | 35.0% |
AGAGGAACACTTCAAACTAA+TGG | - | chr6_4:563623-563642 | Msa0969130:CDS | 35.0% | |
AATCCATTCTCTCCATTACA+AGG | + | chr6_4:563707-563726 | None:intergenic | 35.0% | |
! | TGTAATGGAGAGAATGGATT+TGG | - | chr6_4:563707-563726 | Msa0969130:CDS | 35.0% |
! | GTTGAGGAAGTTGTTGATAA+AGG | - | chr6_4:563752-563771 | Msa0969130:CDS | 35.0% |
! | TGAGGAAGTTGTTGATAAAG+GGG | - | chr6_4:563754-563773 | Msa0969130:CDS | 35.0% |
GGATCTTATCAATATGTGGT+TGG | - | chr6_4:563893-563912 | Msa0969130:CDS | 35.0% | |
TCAATATGTGGTTGGAACTT+CGG | - | chr6_4:563901-563920 | Msa0969130:CDS | 35.0% | |
CATGATGAATTCTACTCTCA+TGG | + | chr6_4:563946-563965 | None:intergenic | 35.0% | |
CATGATACTAGGGTTATCAA+AGG | - | chr6_4:563962-563981 | Msa0969130:CDS | 35.0% | |
! | AAATGGTGTTGAGAGTGATT+TGG | - | chr6_4:563991-564010 | Msa0969130:CDS | 35.0% |
! | TCTTGGCCATAACCAAATTT+TGG | + | chr6_4:564065-564084 | None:intergenic | 35.0% |
AATTTGGTTATGGCCAAGAA+AGG | - | chr6_4:564066-564085 | Msa0969130:CDS | 35.0% | |
ATTTGGTTATGGCCAAGAAA+GGG | - | chr6_4:564067-564086 | Msa0969130:CDS | 35.0% | |
CTTGATGAAGATTGTGATGA+TGG | + | chr6_4:563146-563165 | None:intergenic | 35.0% | |
TACTAGAAGATGAAGATGGT+GGG | + | chr6_4:563193-563212 | None:intergenic | 35.0% | |
ACTATGATGAAAAGAACAGC+TGG | + | chr6_4:563227-563246 | None:intergenic | 35.0% | |
! | AGCTGTTCTTTTCATCATAG+TGG | - | chr6_4:563226-563245 | Msa0969130:CDS | 35.0% |
AGAGGAACACTTCAAACTAA+TGG | - | chr6_4:563623-563642 | Msa0969130:CDS | 35.0% | |
AATCCATTCTCTCCATTACA+AGG | + | chr6_4:563707-563726 | None:intergenic | 35.0% | |
! | TGTAATGGAGAGAATGGATT+TGG | - | chr6_4:563707-563726 | Msa0969130:CDS | 35.0% |
! | GTTGAGGAAGTTGTTGATAA+AGG | - | chr6_4:563752-563771 | Msa0969130:CDS | 35.0% |
! | TGAGGAAGTTGTTGATAAAG+GGG | - | chr6_4:563754-563773 | Msa0969130:CDS | 35.0% |
GGATCTTATCAATATGTGGT+TGG | - | chr6_4:563893-563912 | Msa0969130:CDS | 35.0% | |
TCAATATGTGGTTGGAACTT+CGG | - | chr6_4:563901-563920 | Msa0969130:CDS | 35.0% | |
CATGATGAATTCTACTCTCA+TGG | + | chr6_4:563946-563965 | None:intergenic | 35.0% | |
CATGATACTAGGGTTATCAA+AGG | - | chr6_4:563962-563981 | Msa0969130:CDS | 35.0% | |
! | AAATGGTGTTGAGAGTGATT+TGG | - | chr6_4:563991-564010 | Msa0969130:CDS | 35.0% |
! | TCTTGGCCATAACCAAATTT+TGG | + | chr6_4:564065-564084 | None:intergenic | 35.0% |
AATTTGGTTATGGCCAAGAA+AGG | - | chr6_4:564066-564085 | Msa0969130:CDS | 35.0% | |
ATTTGGTTATGGCCAAGAAA+GGG | - | chr6_4:564067-564086 | Msa0969130:CDS | 35.0% | |
!! | GATGAAGATTGTGATGATGG+TGG | + | chr6_4:563143-563162 | None:intergenic | 40.0% |
ACTAGAAGATGAAGATGGTG+GGG | + | chr6_4:563192-563211 | None:intergenic | 40.0% | |
GTACTAGAAGATGAAGATGG+TGG | + | chr6_4:563194-563213 | None:intergenic | 40.0% | |
! | TGAAAAGCATGGCTACACAT+AGG | + | chr6_4:563551-563570 | None:intergenic | 40.0% |
TCTACTTGTCCTCTTTGTAG+AGG | - | chr6_4:563605-563624 | Msa0969130:CDS | 40.0% | |
! | TGAAGTGTTCCTCTACAAAG+AGG | + | chr6_4:563617-563636 | None:intergenic | 40.0% |
GATGATCTTAGGGAAGATGA+TGG | - | chr6_4:563677-563696 | Msa0969130:CDS | 40.0% | |
! | GATGATGGTTGTCCTTGTAA+TGG | - | chr6_4:563692-563711 | Msa0969130:CDS | 40.0% |
! | TGTCCTTGTAATGGAGAGAA+TGG | - | chr6_4:563701-563720 | Msa0969130:CDS | 40.0% |
GAAATTCAAGAAGACGAACG+CGG | - | chr6_4:563796-563815 | Msa0969130:CDS | 40.0% | |
GGTAGAGAGAATGAAGAAGT+AGG | - | chr6_4:563824-563843 | Msa0969130:CDS | 40.0% | |
ATTTGCAGAATCATGGGATG+AGG | - | chr6_4:564155-564174 | Msa0969130:CDS | 40.0% | |
TTTGCAGAATCATGGGATGA+GGG | - | chr6_4:564156-564175 | Msa0969130:CDS | 40.0% | |
!! | GATGAAGATTGTGATGATGG+TGG | + | chr6_4:563143-563162 | None:intergenic | 40.0% |
ACTAGAAGATGAAGATGGTG+GGG | + | chr6_4:563192-563211 | None:intergenic | 40.0% | |
GTACTAGAAGATGAAGATGG+TGG | + | chr6_4:563194-563213 | None:intergenic | 40.0% | |
! | TGAAAAGCATGGCTACACAT+AGG | + | chr6_4:563551-563570 | None:intergenic | 40.0% |
TCTACTTGTCCTCTTTGTAG+AGG | - | chr6_4:563605-563624 | Msa0969130:CDS | 40.0% | |
! | TGAAGTGTTCCTCTACAAAG+AGG | + | chr6_4:563617-563636 | None:intergenic | 40.0% |
GATGATCTTAGGGAAGATGA+TGG | - | chr6_4:563677-563696 | Msa0969130:CDS | 40.0% | |
! | GATGATGGTTGTCCTTGTAA+TGG | - | chr6_4:563692-563711 | Msa0969130:CDS | 40.0% |
! | TGTCCTTGTAATGGAGAGAA+TGG | - | chr6_4:563701-563720 | Msa0969130:CDS | 40.0% |
GAAATTCAAGAAGACGAACG+CGG | - | chr6_4:563796-563815 | Msa0969130:CDS | 40.0% | |
GGTAGAGAGAATGAAGAAGT+AGG | - | chr6_4:563824-563843 | Msa0969130:CDS | 40.0% | |
ATTTGCAGAATCATGGGATG+AGG | - | chr6_4:564155-564174 | Msa0969130:CDS | 40.0% | |
TTTGCAGAATCATGGGATGA+GGG | - | chr6_4:564156-564175 | Msa0969130:CDS | 40.0% | |
!! | GAAGATTGTGATGATGGTGG+TGG | + | chr6_4:563140-563159 | None:intergenic | 45.0% |
TTGAATTTCCCGAGTCGAAC+GGG | + | chr6_4:563785-563804 | None:intergenic | 45.0% | |
CTTGAATTTCCCGAGTCGAA+CGG | + | chr6_4:563786-563805 | None:intergenic | 45.0% | |
TGGTTGGAACTTCGGAGTTA+AGG | - | chr6_4:563909-563928 | Msa0969130:CDS | 45.0% | |
GGTTGGAACTTCGGAGTTAA+GGG | - | chr6_4:563910-563929 | Msa0969130:CDS | 45.0% | |
! | GGTGTTGAGAGTGATTTGGA+AGG | - | chr6_4:563995-564014 | Msa0969130:CDS | 45.0% |
!! | GAAGATTGTGATGATGGTGG+TGG | + | chr6_4:563140-563159 | None:intergenic | 45.0% |
TTGAATTTCCCGAGTCGAAC+GGG | + | chr6_4:563785-563804 | None:intergenic | 45.0% | |
CTTGAATTTCCCGAGTCGAA+CGG | + | chr6_4:563786-563805 | None:intergenic | 45.0% | |
TGGTTGGAACTTCGGAGTTA+AGG | - | chr6_4:563909-563928 | Msa0969130:CDS | 45.0% | |
GGTTGGAACTTCGGAGTTAA+GGG | - | chr6_4:563910-563929 | Msa0969130:CDS | 45.0% | |
! | GGTGTTGAGAGTGATTTGGA+AGG | - | chr6_4:563995-564014 | Msa0969130:CDS | 45.0% |
AAGAAGACGAACGCGGAAGT+CGG | - | chr6_4:563803-563822 | Msa0969130:CDS | 50.0% | |
CATGGGATGAGGGAAACAGA+TGG | - | chr6_4:564166-564185 | Msa0969130:CDS | 50.0% | |
AAGAAGACGAACGCGGAAGT+CGG | - | chr6_4:563803-563822 | Msa0969130:CDS | 50.0% | |
CATGGGATGAGGGAAACAGA+TGG | - | chr6_4:564166-564185 | Msa0969130:CDS | 50.0% | |
! | GGGGTTTTGCCCGTTCGACT+CGG | - | chr6_4:563773-563792 | Msa0969130:CDS | 60.0% |
! | GGGTTTTGCCCGTTCGACTC+GGG | - | chr6_4:563774-563793 | Msa0969130:CDS | 60.0% |
! | GGGGTTTTGCCCGTTCGACT+CGG | - | chr6_4:563773-563792 | Msa0969130:CDS | 60.0% |
! | GGGTTTTGCCCGTTCGACTC+GGG | - | chr6_4:563774-563793 | Msa0969130:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 563080 | 564195 | 563080 | ID=Msa0969130;Name=Msa0969130 |
chr6_4 | mRNA | 563080 | 564195 | 563080 | ID=Msa0969130-mRNA-1;Parent=Msa0969130;Name=Msa0969130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|371 |
chr6_4 | exon | 563080 | 564195 | 563080 | ID=Msa0969130-mRNA-1:exon:278;Parent=Msa0969130-mRNA-1 |
chr6_4 | CDS | 563080 | 564195 | 563080 | ID=Msa0969130-mRNA-1:cds;Parent=Msa0969130-mRNA-1 |
Gene Sequence |
Protein sequence |