Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972500 | XP_024641189.1 | 72.168 | 309 | 8 | 2 | 1 | 231 | 1 | 309 | 5.22e-140 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972500 | A0A396H9H0 | 72.168 | 309 | 8 | 2 | 1 | 231 | 1 | 309 | 2.49e-140 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0778550 | Msa0972500 | 0.810194 | 1.301313e-50 | -8.615850e-47 |
| Msa0532050 | Msa0972500 | 0.803782 | 2.958314e-49 | -8.615850e-47 |
| Msa0903180 | Msa0972500 | 0.905840 | 2.805739e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972500 | MtrunA17_Chr6g0451411 | 72.168 | 309 | 8 | 2 | 1 | 231 | 1 | 309 | 4.80e-144 | 405 |
| Msa0972500 | MtrunA17_Chr2g0329701 | 41.404 | 285 | 105 | 3 | 3 | 231 | 89 | 367 | 4.89e-63 | 201 |
| Msa0972500 | MtrunA17_Chr7g0264421 | 41.489 | 282 | 109 | 5 | 3 | 231 | 59 | 337 | 5.85e-58 | 187 |
| Msa0972500 | MtrunA17_Chr6g0451391 | 94.253 | 87 | 4 | 1 | 1 | 86 | 1 | 87 | 2.92e-54 | 170 |
| Msa0972500 | MtrunA17_Chr2g0325301 | 36.957 | 138 | 39 | 1 | 142 | 231 | 6 | 143 | 5.24e-21 | 86.3 |
| Msa0972500 | MtrunA17_Chr6g0451421 | 36.090 | 133 | 37 | 1 | 147 | 231 | 9 | 141 | 3.61e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972500 | AT3G01410.2 | 38.163 | 283 | 123 | 3 | 1 | 231 | 5 | 287 | 2.38e-57 | 185 |
| Msa0972500 | AT3G01410.1 | 38.163 | 283 | 123 | 3 | 1 | 231 | 5 | 287 | 2.38e-57 | 185 |
| Msa0972500 | AT1G24090.1 | 37.234 | 282 | 111 | 5 | 4 | 231 | 80 | 349 | 6.31e-47 | 159 |
| Msa0972500 | AT5G51080.3 | 34.783 | 276 | 98 | 4 | 4 | 231 | 14 | 255 | 4.25e-39 | 137 |
| Msa0972500 | AT5G51080.1 | 34.420 | 276 | 99 | 3 | 4 | 231 | 77 | 318 | 2.26e-38 | 136 |
| Msa0972500 | AT5G51080.2 | 34.420 | 276 | 99 | 3 | 4 | 231 | 77 | 318 | 2.26e-38 | 136 |
Find 48 sgRNAs with CRISPR-Local
Find 498 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGATCAATCATGTTCTT+AGG | 0.166676 | 6_4:+4807841 | Msa0972500:CDS |
| ACTTGCTGTTTGTCCTTATC+AGG | 0.263702 | 6_4:+4805288 | Msa0972500:CDS |
| TGTAACAGATTCAGGGTATA+TGG | 0.267805 | 6_4:+4807748 | Msa0972500:intron |
| TTTCAGGATCCATGTTCTTC+AGG | 0.275363 | 6_4:+4805933 | Msa0972500:intron |
| GTTCTTCCTCCGTAAGAATA+TGG | 0.275553 | 6_4:-4806229 | None:intergenic |
| TCTTGTAGACTTGAGTTTGA+TGG | 0.289086 | 6_4:+4807119 | Msa0972500:CDS |
| GTAAAGAAAGGGAATGTTAT+TGG | 0.292028 | 6_4:+4803885 | Msa0972500:CDS |
| CATGTAAATGCGGGTAGTTT+TGG | 0.319436 | 6_4:+4805262 | Msa0972500:CDS |
| TCTTGTCTCACATGGACTTA+AGG | 0.366869 | 6_4:+4805213 | Msa0972500:CDS |
| CTTGTCTCACATGGACTTAA+GGG | 0.382399 | 6_4:+4805214 | Msa0972500:CDS |
| TCCTCATCGAAGAGCTTTCA+AGG | 0.382842 | 6_4:+4806265 | Msa0972500:CDS |
| AATCCTGGACCAGCTGGTGC+TGG | 0.416599 | 6_4:+4807155 | Msa0972500:CDS |
| TTACGGAGGAAGAACTAATA+TGG | 0.417311 | 6_4:+4806237 | Msa0972500:CDS |
| AAGCTAATGCTCAAGCAAAT+CGG | 0.418302 | 6_4:+4812266 | Msa0972500:CDS |
| TTTCAGGATCCATATTCTTA+CGG | 0.432472 | 6_4:+4806220 | Msa0972500:intron |
| GCTTTCTATGTTGTAAAGAA+AGG | 0.433125 | 6_4:+4803873 | Msa0972500:CDS |
| CAAGATCAATCATGTTCTTA+GGG | 0.442306 | 6_4:+4807842 | Msa0972500:CDS |
| AGCTAATGCTCAAGCAAATC+GGG | 0.447864 | 6_4:+4812267 | Msa0972500:CDS |
| AAACTTATTCATCAACTCCT+TGG | 0.471646 | 6_4:-4807811 | None:intergenic |
| AAAGTGTCTCAAACCTGATA+AGG | 0.474134 | 6_4:-4805301 | None:intergenic |
| TTCAGGAGGAGGAACTGTTA+TGG | 0.477459 | 6_4:+4805950 | Msa0972500:CDS |
| CTTTCTATGTTGTAAAGAAA+GGG | 0.478602 | 6_4:+4803874 | Msa0972500:CDS |
| GCTATACTGCGTGCTGAAGA+TGG | 0.482375 | 6_4:+4807179 | Msa0972500:CDS |
| CTATACTGCGTGCTGAAGAT+GGG | 0.507342 | 6_4:+4807180 | Msa0972500:CDS |
| GGTGCGTGCAAAGGGAATCC+TGG | 0.517135 | 6_4:+4807140 | Msa0972500:CDS |
| GCTCCAGCACCAGCTGGTCC+AGG | 0.521445 | 6_4:-4807158 | None:intergenic |
| AAAGGGAATCCTGGACCAGC+TGG | 0.523320 | 6_4:+4807149 | Msa0972500:CDS |
| ATCTTGCGATCTCTTTAATG+AGG | 0.527010 | 6_4:-4805979 | None:intergenic |
| AGCAGCACTGATAGAGTAAG+TGG | 0.536190 | 6_4:-4805239 | None:intergenic |
| AATCGGGCTATCAATCTAAG+AGG | 0.546433 | 6_4:+4812283 | Msa0972500:CDS |
| CAGGATCCATGTTCTTCAGG+AGG | 0.547487 | 6_4:+4805936 | Msa0972500:intron |
| GAGTTTGATGGTGCGTGCAA+AGG | 0.553758 | 6_4:+4807131 | Msa0972500:CDS |
| AGTTTGATGGTGCGTGCAAA+GGG | 0.555043 | 6_4:+4807132 | Msa0972500:CDS |
| AGTATAGCTCCAGCACCAGC+TGG | 0.573265 | 6_4:-4807164 | None:intergenic |
| TTCTTTACCTCAAGAAACTG+AGG | 0.573541 | 6_4:+4805186 | Msa0972500:CDS |
| CATACAGAAGATGAAAGTAA+AGG | 0.576695 | 6_4:-4803936 | None:intergenic |
| GATCCATGTTCTTCAGGAGG+AGG | 0.580570 | 6_4:+4805939 | Msa0972500:CDS |
| AGATACTCCTCAGTTTCTTG+AGG | 0.586973 | 6_4:-4805193 | None:intergenic |
| AGTGCTGCTCATGTAAATGC+GGG | 0.591618 | 6_4:+4805253 | Msa0972500:CDS |
| CGAATTATGCAATGAAGCCA+AGG | 0.597835 | 6_4:+4807794 | Msa0972500:CDS |
| CAGTGCTGCTCATGTAAATG+CGG | 0.597847 | 6_4:+4805252 | Msa0972500:CDS |
| GTTCCTCCTCCTGAAGAACA+TGG | 0.608819 | 6_4:-4805942 | None:intergenic |
| CAGGATCCATATTCTTACGG+AGG | 0.616635 | 6_4:+4806223 | Msa0972500:intron |
| AACCTTGGAGATTTAACGCG+CGG | 0.635100 | 6_4:-4808168 | None:intergenic |
| ACCTTGAAAGCTCTTCGATG+AGG | 0.648075 | 6_4:-4806266 | None:intergenic |
| CACACTAGCATCAAGTTGTG+TGG | 0.660919 | 6_4:-4806290 | None:intergenic |
| GAGGAGTATCTTGTCTCACA+TGG | 0.666064 | 6_4:+4805205 | Msa0972500:CDS |
| GCGTGCTGAAGATGGGAGCA+AGG | 0.698100 | 6_4:+4807187 | Msa0972500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTATTCTTATATTATA+TGG | + | chr6_4:4806172-4806191 | Msa0972500:intron | 10.0% |
| !! | ATGAAATTATTCATATAATT+AGG | - | chr6_4:4808007-4808026 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAATGTTCA+AGG | + | chr6_4:4808114-4808133 | Msa0972500:intron | 10.0% |
| !!! | TTGGTAAATAATTTTATTTT+TGG | - | chr6_4:4808994-4809013 | None:intergenic | 10.0% |
| !! | AATATGATTTACAAATATAT+TGG | - | chr6_4:4809013-4809032 | None:intergenic | 10.0% |
| !! | ATATATTTGTAAATCATATT+TGG | + | chr6_4:4809013-4809032 | Msa0972500:intron | 10.0% |
| !!! | ATATTTGATTTCAAATAAAT+TGG | + | chr6_4:4809094-4809113 | Msa0972500:intron | 10.0% |
| !!! | CAAATATTTTTTTTTTTTGA+AGG | + | chr6_4:4809405-4809424 | Msa0972500:intron | 10.0% |
| !!! | ATAAAATAGATTTTTTTTAG+AGG | - | chr6_4:4810165-4810184 | None:intergenic | 10.0% |
| !! | ATAAAATAAAATTGTACATA+CGG | - | chr6_4:4811440-4811459 | None:intergenic | 10.0% |
| !!! | GCAAATAAAATTTAAAATTT+TGG | - | chr6_4:4811585-4811604 | None:intergenic | 10.0% |
| !! | AAAATAACAACAAAAAAAAA+AGG | - | chr6_4:4813044-4813063 | None:intergenic | 10.0% |
| !!! | ATTTTGTAAAATATCTATCT+AGG | - | chr6_4:4807051-4807070 | None:intergenic | 15.0% |
| !!! | TTTATTTTCATATCTTCATT+TGG | + | chr6_4:4808407-4808426 | Msa0972500:intron | 15.0% |
| !! | CATATAGTTAGAAATTTAAT+TGG | - | chr6_4:4808589-4808608 | None:intergenic | 15.0% |
| !! | AATTATTTAGCAATATCATT+CGG | + | chr6_4:4808834-4808853 | Msa0972500:intron | 15.0% |
| !!! | CACCAATAATAATTTTTTTA+AGG | + | chr6_4:4808967-4808986 | Msa0972500:intron | 15.0% |
| !! | GTCCTTAAAAAAATTATTAT+TGG | - | chr6_4:4808972-4808991 | None:intergenic | 15.0% |
| !!! | AATATTTACAGCTATTTTTA+TGG | - | chr6_4:4809133-4809152 | None:intergenic | 15.0% |
| !! | GTTATAACAAAATATTTGAT+TGG | - | chr6_4:4809554-4809573 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGAATGTAACAAA+CGG | + | chr6_4:4810247-4810266 | Msa0972500:intron | 15.0% |
| !!! | TGATTTTTTCAAATTATTAG+CGG | + | chr6_4:4810381-4810400 | Msa0972500:intron | 15.0% |
| !! | ATTGAAAAAAATATTGTATG+CGG | + | chr6_4:4810706-4810725 | Msa0972500:intron | 15.0% |
| !! | AGAATTAGAAATAAATGATT+GGG | - | chr6_4:4810865-4810884 | None:intergenic | 15.0% |
| !! | TAGAATTAGAAATAAATGAT+TGG | - | chr6_4:4810866-4810885 | None:intergenic | 15.0% |
| !! | ATTGAAAAAAATATTGTATG+CGG | + | chr6_4:4810706-4810725 | Msa0972500:intron | 15.0% |
| !! | AGAATTAGAAATAAATGATT+GGG | - | chr6_4:4810865-4810884 | None:intergenic | 15.0% |
| !! | TAGAATTAGAAATAAATGAT+TGG | - | chr6_4:4810866-4810885 | None:intergenic | 15.0% |
| !! | CAAAATTATTATACCTAAAT+TGG | + | chr6_4:4811217-4811236 | Msa0972500:intron | 15.0% |
| !!! | TTATTTTTTTCCAAATTTTG+AGG | + | chr6_4:4811456-4811475 | Msa0972500:intron | 15.0% |
| !!! | TTTTTCATATCATATGTTAT+TGG | + | chr6_4:4811992-4812011 | Msa0972500:intron | 15.0% |
| !!! | TAAAGAAAAAACTTGTTAAA+TGG | - | chr6_4:4812225-4812244 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTCTTTATGTTTA+AGG | + | chr6_4:4812231-4812250 | Msa0972500:intron | 15.0% |
| !! | TCTAAATGAAAATATATCTA+TGG | - | chr6_4:4812414-4812433 | None:intergenic | 15.0% |
| !!! | AATATTGTTAACAATTTGTT+TGG | + | chr6_4:4812449-4812468 | Msa0972500:intron | 15.0% |
| !! | AATATGAAAAATAAATTCTG+AGG | - | chr6_4:4812479-4812498 | None:intergenic | 15.0% |
| !!! | TCAGAATTTATTTTTCATAT+TGG | + | chr6_4:4812478-4812497 | Msa0972500:intron | 15.0% |
| !!! | TCTTCATATATTTTTTTAGA+TGG | + | chr6_4:4812532-4812551 | Msa0972500:intron | 15.0% |
| !!! | AACAATATTTTTTAAATGGT+GGG | - | chr6_4:4812684-4812703 | None:intergenic | 15.0% |
| !!! | TCAGAACAATATTTTTTAAA+TGG | - | chr6_4:4812688-4812707 | None:intergenic | 15.0% |
| !! | AAAAAGAAAAATGCTAATAA+GGG | - | chr6_4:4812774-4812793 | None:intergenic | 15.0% |
| !! | TAAAAAGAAAAATGCTAATA+AGG | - | chr6_4:4812775-4812794 | None:intergenic | 15.0% |
| !!! | TGTTATTTTTGAATAATACT+AGG | + | chr6_4:4813055-4813074 | Msa0972500:intron | 15.0% |
| !!! | ACATTTTACTAATACAAATT+TGG | + | chr6_4:4813097-4813116 | Msa0972500:intron | 15.0% |
| !! | ACTAAATTAAAGAAATTGAT+TGG | + | chr6_4:4813210-4813229 | Msa0972500:intron | 15.0% |
| !!! | ATCAGTTTGAATTTTGAAAA+GGG | - | chr6_4:4803662-4803681 | None:intergenic | 20.0% |
| !!! | AATCAGTTTGAATTTTGAAA+AGG | - | chr6_4:4803663-4803682 | None:intergenic | 20.0% |
| !!! | AGAATCACTTTTTTAATGAT+TGG | - | chr6_4:4803693-4803712 | None:intergenic | 20.0% |
| !!! | TGGATTTTTTTTCTGTATTT+AGG | + | chr6_4:4804074-4804093 | Msa0972500:intron | 20.0% |
| !!! | GGATTTTTTTTCTGTATTTA+GGG | + | chr6_4:4804075-4804094 | Msa0972500:intron | 20.0% |
| !!! | TTTGGATTTTTTCTGTATTT+TGG | + | chr6_4:4804641-4804660 | Msa0972500:intron | 20.0% |
| !!! | TTGGATTTTTTCTGTATTTT+GGG | + | chr6_4:4804642-4804661 | Msa0972500:intron | 20.0% |
| !!! | TTATGATTATATTAGTGGAT+GGG | - | chr6_4:4804741-4804760 | None:intergenic | 20.0% |
| !! | TTTATGATTATATTAGTGGA+TGG | - | chr6_4:4804742-4804761 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTCATAAGCTAA+AGG | - | chr6_4:4804825-4804844 | None:intergenic | 20.0% |
| !! | ATTAAACTGTTTATCCAAAT+TGG | + | chr6_4:4804985-4805004 | Msa0972500:intron | 20.0% |
| !! | AATACAATCCAACATAATAA+GGG | - | chr6_4:4805795-4805814 | None:intergenic | 20.0% |
| !! | ATCAGATATAATGATAGTTA+TGG | - | chr6_4:4805832-4805851 | None:intergenic | 20.0% |
| !! | AGATTAATCACTATAATGAT+GGG | - | chr6_4:4806158-4806177 | None:intergenic | 20.0% |
| !! | TAGATTAATCACTATAATGA+TGG | - | chr6_4:4806159-4806178 | None:intergenic | 20.0% |
| !!! | TAAGAGATTAATTTTCTTTC+AGG | + | chr6_4:4806204-4806223 | Msa0972500:intron | 20.0% |
| !!! | TTGTTTTTCTTTCATTTGAT+TGG | + | chr6_4:4806604-4806623 | Msa0972500:intron | 20.0% |
| !! | GCTTTAATCTAAAAACAAAA+AGG | - | chr6_4:4808044-4808063 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTGTCTTACTATT+TGG | + | chr6_4:4808072-4808091 | Msa0972500:intron | 20.0% |
| !! | GTTTAATATGCATGAAAATT+AGG | - | chr6_4:4808335-4808354 | None:intergenic | 20.0% |
| !! | AGATAAAATAATGATCAACT+AGG | + | chr6_4:4808494-4808513 | Msa0972500:intron | 20.0% |
| !! | CCTATTTAAATGTTAAACTT+GGG | + | chr6_4:4808674-4808693 | Msa0972500:intron | 20.0% |
| !! | CTATTTAAATGTTAAACTTG+GGG | + | chr6_4:4808675-4808694 | Msa0972500:intron | 20.0% |
| !! | ATGATTAAATACTTACAGTA+AGG | - | chr6_4:4808753-4808772 | None:intergenic | 20.0% |
| !!! | ATTTAATCATATGCTTTTGA+AGG | + | chr6_4:4808763-4808782 | Msa0972500:intron | 20.0% |
| !! | ATTATTTAGCAATATCATTC+GGG | + | chr6_4:4808835-4808854 | Msa0972500:intron | 20.0% |
| !!! | ATTCTTTTTTTTTCTTTGAG+AGG | + | chr6_4:4809355-4809374 | Msa0972500:intron | 20.0% |
| !! | AATAAATATCGTGAAAATTG+AGG | + | chr6_4:4809470-4809489 | Msa0972500:intron | 20.0% |
| !! | AAAAATATTAGAGCAAGAAT+TGG | + | chr6_4:4809618-4809637 | Msa0972500:intron | 20.0% |
| !! | AAAATATTAGAGCAAGAATT+GGG | + | chr6_4:4809619-4809638 | Msa0972500:intron | 20.0% |
| !!! | ATATATGATATGTTTTTCCA+TGG | + | chr6_4:4809716-4809735 | Msa0972500:intron | 20.0% |
| !! | TAGAACCTATAAAAAAGTTA+AGG | + | chr6_4:4809824-4809843 | Msa0972500:intron | 20.0% |
| !! | AGAACCTATAAAAAAGTTAA+GGG | + | chr6_4:4809825-4809844 | Msa0972500:intron | 20.0% |
| !!! | ATAACCCTTAACTTTTTTAT+AGG | - | chr6_4:4809832-4809851 | None:intergenic | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | chr6_4:4809946-4809965 | None:intergenic | 20.0% |
| !!! | AACAAATAATCTAGTTTGTT+TGG | + | chr6_4:4810071-4810090 | Msa0972500:intron | 20.0% |
| !! | CTTAAAAAAGCTATAACAAA+CGG | + | chr6_4:4810280-4810299 | Msa0972500:intron | 20.0% |
| !! | TTAAAAAAGCTATAACAAAC+GGG | + | chr6_4:4810336-4810355 | Msa0972500:intron | 20.0% |
| !!! | TTCCTTTTTACTTGAAAATT+TGG | + | chr6_4:4810681-4810700 | Msa0972500:intron | 20.0% |
| !!! | TACCAAATTTTCAAGTAAAA+AGG | - | chr6_4:4810686-4810705 | None:intergenic | 20.0% |
| !! | TTGAAAAAAATATTGTATGC+GGG | + | chr6_4:4810707-4810726 | Msa0972500:intron | 20.0% |
| !! | TTGAAAAAAATATTGTATGC+GGG | + | chr6_4:4810707-4810726 | Msa0972500:intron | 20.0% |
| !!! | TTGTATTGTTTGTTGAAAAT+GGG | + | chr6_4:4811671-4811690 | Msa0972500:intron | 20.0% |
| !!! | ATGTACTCATTTTATTTCAA+AGG | - | chr6_4:4811972-4811991 | None:intergenic | 20.0% |
| !! | AATCACTAAATAAATACCTT+AGG | - | chr6_4:4812131-4812150 | None:intergenic | 20.0% |
| !!! | AAGGTATTTATTTAGTGATT+TGG | + | chr6_4:4812131-4812150 | Msa0972500:intron | 20.0% |
| !!! | GAACAATATTTTTTAAATGG+TGG | - | chr6_4:4812685-4812704 | None:intergenic | 20.0% |
| !! | AAAAAATATTGTTCTGATGT+TGG | + | chr6_4:4812691-4812710 | Msa0972500:intron | 20.0% |
| !! | AATTCATGCACATAAAAATA+TGG | - | chr6_4:4812744-4812763 | None:intergenic | 20.0% |
| !!! | TAAGTATTTCTTTTGACTTA+GGG | + | chr6_4:4812887-4812906 | Msa0972500:intron | 20.0% |
| !! | ATTTGATGTATTCTATCAAT+TGG | - | chr6_4:4812986-4813005 | None:intergenic | 20.0% |
| !!! | AAATTTAAACCTACAGTTTT+CGG | - | chr6_4:4813248-4813267 | None:intergenic | 20.0% |
| !!! | CACTTTTTTAATGATTGGAA+AGG | - | chr6_4:4803688-4803707 | None:intergenic | 25.0% |
| !! | CAATAGTGTAAGTTACATTT+TGG | - | chr6_4:4803730-4803749 | None:intergenic | 25.0% |
| ! | CTTTCTATGTTGTAAAGAAA+GGG | + | chr6_4:4803874-4803893 | Msa0972500:CDS | 25.0% |
| ! | AAAGACAAAAACTTTGCATA+AGG | - | chr6_4:4803965-4803984 | None:intergenic | 25.0% |
| !! | TTATGCAAAGTTTTTGTCTT+TGG | + | chr6_4:4803964-4803983 | Msa0972500:intron | 25.0% |
| !!! | TTTGGAATTTTTCTGCATTT+GGG | + | chr6_4:4803982-4804001 | Msa0972500:intron | 25.0% |
| ! | AGAAAAAAAATCCATAAGCT+GGG | - | chr6_4:4804068-4804087 | None:intergenic | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | - | chr6_4:4804102-4804121 | None:intergenic | 25.0% |
| ! | CATTATTCATAAGTTTGTCA+AGG | - | chr6_4:4804215-4804234 | None:intergenic | 25.0% |
| ! | TTCAAACATGATCTATATAG+AGG | + | chr6_4:4804578-4804597 | Msa0972500:intron | 25.0% |
| ! | TAAACGGAGTTCATTTATAA+AGG | + | chr6_4:4804692-4804711 | Msa0972500:intron | 25.0% |
| ! | AAACGGAGTTCATTTATAAA+GGG | + | chr6_4:4804693-4804712 | Msa0972500:intron | 25.0% |
| ! | GTGGTTTATGATTATATTAG+TGG | - | chr6_4:4804746-4804765 | None:intergenic | 25.0% |
| !!! | TTTTTTTCATAAGCTAAAGG+CGG | - | chr6_4:4804822-4804841 | None:intergenic | 25.0% |
| !! | AGTCAAAATTGTTTTCATCA+AGG | - | chr6_4:4804860-4804879 | None:intergenic | 25.0% |
| ! | ACACCATAAGTTCAATATAA+AGG | - | chr6_4:4805024-4805043 | None:intergenic | 25.0% |
| ! | TTATATTGAACTTATGGTGT+TGG | + | chr6_4:4805024-4805043 | Msa0972500:intron | 25.0% |
| !!! | CTTTGTTGTTTTGGTTAAAA+TGG | + | chr6_4:4805086-4805105 | Msa0972500:intron | 25.0% |
| !!! | TGTTTTGGTTAAAATGGAAA+TGG | + | chr6_4:4805092-4805111 | Msa0972500:intron | 25.0% |
| !!! | GTTTTGGTTAAAATGGAAAT+GGG | + | chr6_4:4805093-4805112 | Msa0972500:intron | 25.0% |
| !!! | TTTTGGTTAAAATGGAAATG+GGG | + | chr6_4:4805094-4805113 | Msa0972500:intron | 25.0% |
| !!! | AAGCTGTAAGTGTTTTTAAA+GGG | + | chr6_4:4805161-4805180 | Msa0972500:CDS | 25.0% |
| !! | CGTAAATTTTCCTCTTATAT+TGG | + | chr6_4:4805357-4805376 | Msa0972500:intron | 25.0% |
| ! | TTTCCTCTTATATTGGATAA+AGG | + | chr6_4:4805364-4805383 | Msa0972500:intron | 25.0% |
| ! | CTATTTCATCCAATGATTAT+CGG | - | chr6_4:4805414-4805433 | None:intergenic | 25.0% |
| ! | GTTCAAATTCTGTTATTCTA+TGG | + | chr6_4:4805732-4805751 | Msa0972500:intron | 25.0% |
| ! | CAATACAATCCAACATAATA+AGG | - | chr6_4:4805796-4805815 | None:intergenic | 25.0% |
| ! | AATGTAAAGGTAATAATTCC+TGG | - | chr6_4:4806054-4806073 | None:intergenic | 25.0% |
| !!! | TTTGGCATTTTTGAAGTATT+GGG | + | chr6_4:4806128-4806147 | Msa0972500:intron | 25.0% |
| !! | TAATATTCGGTGAAAATTCA+TGG | - | chr6_4:4806342-4806361 | None:intergenic | 25.0% |
| !! | CATTTTCAACAAATTTGCAA+AGG | + | chr6_4:4806443-4806462 | Msa0972500:intron | 25.0% |
| ! | AAAACAATAGAGAGAGAAAA+AGG | + | chr6_4:4806630-4806649 | Msa0972500:intron | 25.0% |
| ! | GTCAAAAAGTTGTTAGAAAA+TGG | + | chr6_4:4806697-4806716 | Msa0972500:intron | 25.0% |
| !! | CATTTCTCATTACCATTTTA+TGG | + | chr6_4:4806732-4806751 | Msa0972500:intron | 25.0% |
| ! | ACATACATACTTTAAATGAC+AGG | - | chr6_4:4806819-4806838 | None:intergenic | 25.0% |
| !! | TGTCATTTAAAGTATGTATG+TGG | + | chr6_4:4806818-4806837 | Msa0972500:intron | 25.0% |
| ! | TGCATACAAATGAAGAAAAT+CGG | - | chr6_4:4806926-4806945 | None:intergenic | 25.0% |
| !! | GATTTCATCTCTTAAAGTTT+TGG | + | chr6_4:4806997-4807016 | Msa0972500:intron | 25.0% |
| !! | GAATATCGAGGATTAATTTT+AGG | + | chr6_4:4807346-4807365 | Msa0972500:intron | 25.0% |
| ! | AGTGAAATATAGACCAATAT+AGG | - | chr6_4:4807660-4807679 | None:intergenic | 25.0% |
| ! | ACAAAAGCAAACAAAAATGA+TGG | - | chr6_4:4807731-4807750 | None:intergenic | 25.0% |
| ! | AAAGTAAAAAACGCGAATAT+GGG | + | chr6_4:4807771-4807790 | Msa0972500:CDS | 25.0% |
| ! | GTCTAACATTTAAGAGAAAA+GGG | - | chr6_4:4807921-4807940 | None:intergenic | 25.0% |
| ! | TTAAATGTTAGACGTTACAT+TGG | + | chr6_4:4807928-4807947 | Msa0972500:intron | 25.0% |
| ! | AGTAAGACAAAAGAAAAAAG+AGG | - | chr6_4:4808069-4808088 | None:intergenic | 25.0% |
| ! | TGAAAATTAGGAGATTTAAG+TGG | - | chr6_4:4808323-4808342 | None:intergenic | 25.0% |
| !! | TTTTCATATCTTCATTTGGA+AGG | + | chr6_4:4808411-4808430 | Msa0972500:intron | 25.0% |
| ! | TTTCATATCTTCATTTGGAA+GGG | + | chr6_4:4808412-4808431 | Msa0972500:intron | 25.0% |
| !! | AAGGGGAACATAAATTTTAA+GGG | + | chr6_4:4808430-4808449 | Msa0972500:intron | 25.0% |
| ! | GCCTATTTAAATGTTAAACT+TGG | + | chr6_4:4808673-4808692 | Msa0972500:intron | 25.0% |
| ! | CCCAAGTTTAACATTTAAAT+AGG | - | chr6_4:4808677-4808696 | None:intergenic | 25.0% |
| !!! | AGAAAAGTGCTTTTAATGTT+TGG | + | chr6_4:4808701-4808720 | Msa0972500:intron | 25.0% |
| ! | AATATCACAAGAGTAATAGA+AGG | - | chr6_4:4809079-4809098 | None:intergenic | 25.0% |
| !! | CTACATGAAATCACTATTTT+TGG | + | chr6_4:4809183-4809202 | Msa0972500:intron | 25.0% |
| ! | AAATATTAGAGCAAGAATTG+GGG | + | chr6_4:4809620-4809639 | Msa0972500:intron | 25.0% |
| !!! | TAATCTTATTTTCATAGTCC+AGG | - | chr6_4:4809793-4809812 | None:intergenic | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+GGG | - | chr6_4:4809945-4809964 | None:intergenic | 25.0% |
| ! | ACTTGTCAATTAATAAATGG+AGG | - | chr6_4:4810625-4810644 | None:intergenic | 25.0% |
| ! | GAGACTTGTCAATTAATAAA+TGG | - | chr6_4:4810628-4810647 | None:intergenic | 25.0% |
| ! | TGAAATTGTCAAGATTACAA+CGG | - | chr6_4:4811275-4811294 | None:intergenic | 25.0% |
| ! | GTTAATTATGCATTATCCAT+AGG | - | chr6_4:4811354-4811373 | None:intergenic | 25.0% |
| ! | AAACTTTATAGTTTCCAACA+GGG | - | chr6_4:4811538-4811557 | None:intergenic | 25.0% |
| ! | AAAACTTTATAGTTTCCAAC+AGG | - | chr6_4:4811539-4811558 | None:intergenic | 25.0% |
| !! | GTTGTATTGTTTGTTGAAAA+TGG | + | chr6_4:4811670-4811689 | Msa0972500:intron | 25.0% |
| !! | TGTGATATTTGCTAATCATT+AGG | + | chr6_4:4812158-4812177 | Msa0972500:intron | 25.0% |
| !!! | AAAAACTTGTTAAATGGTGT+TGG | - | chr6_4:4812219-4812238 | None:intergenic | 25.0% |
| ! | ATTCAACAACTGAAATGTAT+AGG | - | chr6_4:4812331-4812350 | None:intergenic | 25.0% |
| !! | TTTTTCATATTGGTATGTGA+TGG | + | chr6_4:4812488-4812507 | Msa0972500:intron | 25.0% |
| !! | TTTTCATATTGGTATGTGAT+GGG | + | chr6_4:4812489-4812508 | Msa0972500:intron | 25.0% |
| !!! | CTAAGTATTTCTTTTGACTT+AGG | + | chr6_4:4812886-4812905 | Msa0972500:intron | 25.0% |
| ! | TTAATTTATCCGAAAACTGT+AGG | + | chr6_4:4813236-4813255 | Msa0972500:intron | 25.0% |
| TAAAAAAGTGATTCTGCAAC+TGG | + | chr6_4:4803698-4803717 | Msa0972500:five_prime_UTR | 30.0% | |
| AAAAAAGTGATTCTGCAACT+GGG | + | chr6_4:4803699-4803718 | Msa0972500:five_prime_UTR | 30.0% | |
| GCTTTCTATGTTGTAAAGAA+AGG | + | chr6_4:4803873-4803892 | Msa0972500:CDS | 30.0% | |
| GTAAAGAAAGGGAATGTTAT+TGG | + | chr6_4:4803885-4803904 | Msa0972500:CDS | 30.0% | |
| CATACAGAAGATGAAAGTAA+AGG | - | chr6_4:4803939-4803958 | None:intergenic | 30.0% | |
| !!! | CTTTGGAATTTTTCTGCATT+TGG | + | chr6_4:4803981-4804000 | Msa0972500:intron | 30.0% |
| CAGAAAAAAAATCCATAAGC+TGG | - | chr6_4:4804069-4804088 | None:intergenic | 30.0% | |
| AAAAATAAGCCAATCCAAAC+GGG | - | chr6_4:4804101-4804120 | None:intergenic | 30.0% | |
| CACAAATCATGCATAACTAA+GGG | - | chr6_4:4804307-4804326 | None:intergenic | 30.0% | |
| TCACAAATCATGCATAACTA+AGG | - | chr6_4:4804308-4804327 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr6_4:4804436-4804455 | None:intergenic | 30.0% | |
| TAGCTTATGAAAACAGCTTA+TGG | + | chr6_4:4804474-4804493 | Msa0972500:intron | 30.0% | |
| AAGACAAAAACTTAGCATGA+AGG | - | chr6_4:4804623-4804642 | None:intergenic | 30.0% | |
| ! | TCATGCTAAGTTTTTGTCTT+TGG | + | chr6_4:4804623-4804642 | Msa0972500:intron | 30.0% |
| TATAAATGAACTCCGTTTAG+TGG | - | chr6_4:4804691-4804710 | None:intergenic | 30.0% | |
| ! | TTTATCCAAATTGGCCTAAA+TGG | + | chr6_4:4804994-4805013 | Msa0972500:intron | 30.0% |
| AATATAAAGGAGCTCCATTT+AGG | - | chr6_4:4805011-4805030 | None:intergenic | 30.0% | |
| GCTCCTTTATATTGAACTTA+TGG | + | chr6_4:4805018-4805037 | Msa0972500:intron | 30.0% | |
| !! | GAAGCTGTAAGTGTTTTTAA+AGG | + | chr6_4:4805160-4805179 | Msa0972500:CDS | 30.0% |
| CGATAATCATTGGATGAAAT+AGG | + | chr6_4:4805412-4805431 | Msa0972500:intron | 30.0% | |
| TTGAATGTAACCACATGTAT+AGG | + | chr6_4:4805439-4805458 | Msa0972500:intron | 30.0% | |
| ! | ATTTTCCTCCCTTATTATGT+TGG | + | chr6_4:4805784-4805803 | Msa0972500:intron | 30.0% |
| GAAGAGATTAATGTTCTTTC+AGG | + | chr6_4:4805917-4805936 | Msa0972500:intron | 30.0% | |
| !! | TTAAAGTTGATAACTCACAC+TGG | - | chr6_4:4806021-4806040 | None:intergenic | 30.0% |
| AACTTTAAATATCCTCAACC+AGG | + | chr6_4:4806033-4806052 | Msa0972500:intron | 30.0% | |
| !! | ATACGTCTTTGGTAATGTAA+AGG | - | chr6_4:4806067-4806086 | None:intergenic | 30.0% |
| CTTCAAAAATGCCAAAGTAT+CGG | - | chr6_4:4806124-4806143 | None:intergenic | 30.0% | |
| !!! | CTTTGGCATTTTTGAAGTAT+TGG | + | chr6_4:4806127-4806146 | Msa0972500:intron | 30.0% |
| !!! | TTGGCATTTTTGAAGTATTG+GGG | + | chr6_4:4806129-4806148 | Msa0972500:intron | 30.0% |
| TTTCAGGATCCATATTCTTA+CGG | + | chr6_4:4806220-4806239 | Msa0972500:intron | 30.0% | |
| ! | AGCCTTTCTTTGGTAATATT+CGG | - | chr6_4:4806355-4806374 | None:intergenic | 30.0% |
| ACTCTCTTCTGTACAAAAAA+AGG | - | chr6_4:4806412-4806431 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTACAGAAGAGAGT+TGG | + | chr6_4:4806412-4806431 | Msa0972500:intron | 30.0% |
| ATTAACAATGCGAAACACAA+AGG | - | chr6_4:4806530-4806549 | None:intergenic | 30.0% | |
| GTACAAATATCACTACTCAA+TGG | - | chr6_4:4806555-4806574 | None:intergenic | 30.0% | |
| GTGATATTTGTACAACTCTT+TGG | + | chr6_4:4806562-4806581 | Msa0972500:intron | 30.0% | |
| ! | CATTACCATTTTATGGCTTT+CGG | + | chr6_4:4806739-4806758 | Msa0972500:intron | 30.0% |
| AGAAAATCGGGCAATTAATA+GGG | - | chr6_4:4806913-4806932 | None:intergenic | 30.0% | |
| AAGAAAATCGGGCAATTAAT+AGG | - | chr6_4:4806914-4806933 | None:intergenic | 30.0% | |
| GCATACAAATGAAGAAAATC+GGG | - | chr6_4:4806925-4806944 | None:intergenic | 30.0% | |
| AATAATGTTGCTGAATATCG+AGG | + | chr6_4:4807334-4807353 | Msa0972500:intron | 30.0% | |
| TTGAAACAAGCTCTCAAAAA+TGG | + | chr6_4:4807370-4807389 | Msa0972500:intron | 30.0% | |
| !! | TTTGCTTTTGTAACAGATTC+AGG | + | chr6_4:4807740-4807759 | Msa0972500:intron | 30.0% |
| !! | TTGCTTTTGTAACAGATTCA+GGG | + | chr6_4:4807741-4807760 | Msa0972500:intron | 30.0% |
| GAAAGTAAAAAACGCGAATA+TGG | + | chr6_4:4807770-4807789 | Msa0972500:CDS | 30.0% | |
| AAACTTATTCATCAACTCCT+TGG | - | chr6_4:4807814-4807833 | None:intergenic | 30.0% | |
| TCAAGATCAATCATGTTCTT+AGG | + | chr6_4:4807841-4807860 | Msa0972500:CDS | 30.0% | |
| CAAGATCAATCATGTTCTTA+GGG | + | chr6_4:4807842-4807861 | Msa0972500:CDS | 30.0% | |
| CGTCTAACATTTAAGAGAAA+AGG | - | chr6_4:4807922-4807941 | None:intergenic | 30.0% | |
| AAAGTCTTGAAATCTAACCT+TGG | - | chr6_4:4808186-4808205 | None:intergenic | 30.0% | |
| AATTAGAACTGAAACCGATA+GGG | - | chr6_4:4808217-4808236 | None:intergenic | 30.0% | |
| AAATTAGAACTGAAACCGAT+AGG | - | chr6_4:4808218-4808237 | None:intergenic | 30.0% | |
| ! | CTGAAGAATTTTCTCTATGA+TGG | + | chr6_4:4808361-4808380 | Msa0972500:intron | 30.0% |
| TTCATATCTTCATTTGGAAG+GGG | + | chr6_4:4808413-4808432 | Msa0972500:intron | 30.0% | |
| ! | GAAGGGGAACATAAATTTTA+AGG | + | chr6_4:4808429-4808448 | Msa0972500:intron | 30.0% |
| !!! | AGAGATTTTAGCTGTAACAA+AGG | + | chr6_4:4808561-4808580 | Msa0972500:intron | 30.0% |
| GACATTTCTTGTATAGTTTG+TGG | + | chr6_4:4808651-4808670 | Msa0972500:intron | 30.0% | |
| ! | AAGTGCTTTTAATGTTTGGA+TGG | + | chr6_4:4808705-4808724 | Msa0972500:intron | 30.0% |
| ! | CCTTGAAAAGCATAAGAAAA+AGG | - | chr6_4:4808800-4808819 | None:intergenic | 30.0% |
| ! | CCTTTTTCTTATGCTTTTCA+AGG | + | chr6_4:4808797-4808816 | Msa0972500:intron | 30.0% |
| TTCCACTAAGTAATAGAACT+CGG | - | chr6_4:4808866-4808885 | None:intergenic | 30.0% | |
| GAAAATTGAGGAAGAAAATG+TGG | + | chr6_4:4809482-4809501 | Msa0972500:intron | 30.0% | |
| TTGTTATGTTCTTAACTCCA+TGG | - | chr6_4:4809736-4809755 | None:intergenic | 30.0% | |
| AAAAAATCCACACGTACAAA+AGG | + | chr6_4:4810777-4810796 | Msa0972500:intron | 30.0% | |
| ACTAAACCTAACGTAGTAAT+CGG | - | chr6_4:4810826-4810845 | None:intergenic | 30.0% | |
| AAAAAATCCACACGTACAAA+AGG | + | chr6_4:4810777-4810796 | Msa0972500:intron | 30.0% | |
| ACTAAACCTAACGTAGTAAT+CGG | - | chr6_4:4810826-4810845 | None:intergenic | 30.0% | |
| TTATACCTAAATTGGAAACC+AGG | + | chr6_4:4811225-4811244 | Msa0972500:intron | 30.0% | |
| TATACCTAAATTGGAAACCA+GGG | + | chr6_4:4811226-4811245 | Msa0972500:intron | 30.0% | |
| AAATTGTCAAGATTACAACG+GGG | - | chr6_4:4811273-4811292 | None:intergenic | 30.0% | |
| GAAATTGTCAAGATTACAAC+GGG | - | chr6_4:4811274-4811293 | None:intergenic | 30.0% | |
| ! | ACTTTTAACCACAGACAAAT+AGG | + | chr6_4:4811322-4811341 | Msa0972500:intron | 30.0% |
| ! | GTCTTTTAGACTTTTACCTA+CGG | + | chr6_4:4811386-4811405 | Msa0972500:intron | 30.0% |
| TGATGTTCATATATCCTTTC+TGG | - | chr6_4:4811886-4811905 | None:intergenic | 30.0% | |
| TATATGAACATCATTGTGCA+AGG | + | chr6_4:4811893-4811912 | Msa0972500:intron | 30.0% | |
| CACATAAGCTCTTTAAATGT+GGG | - | chr6_4:4812055-4812074 | None:intergenic | 30.0% | |
| TCACATAAGCTCTTTAAATG+TGG | - | chr6_4:4812056-4812075 | None:intergenic | 30.0% | |
| TTTAAAGAGCTTATGTGATG+AGG | + | chr6_4:4812058-4812077 | Msa0972500:intron | 30.0% | |
| CTGAAATGTATAGGAAACTA+AGG | - | chr6_4:4812322-4812341 | None:intergenic | 30.0% | |
| TTTCATATTGGTATGTGATG+GGG | + | chr6_4:4812490-4812509 | Msa0972500:intron | 30.0% | |
| ! | CATGCCACTTAAAAAACTAT+TGG | + | chr6_4:4812601-4812620 | Msa0972500:intron | 30.0% |
| TTGTAAACACATGAACATAG+TGG | - | chr6_4:4812627-4812646 | None:intergenic | 30.0% | |
| ! | TAAAGTTGTGTTTTGTAGCT+AGG | - | chr6_4:4812915-4812934 | None:intergenic | 30.0% |
| TAGCTACAAAACACAACTTT+AGG | + | chr6_4:4812914-4812933 | Msa0972500:intron | 30.0% | |
| ACGTTGGAATATTGCAATAA+TGG | - | chr6_4:4813132-4813151 | None:intergenic | 30.0% | |
| TGAAAGTTAAACGTTTACGT+TGG | - | chr6_4:4813148-4813167 | None:intergenic | 30.0% | |
| !!! | TTTTTGTAGTTGATGATGCG+TGG | - | chr6_4:4803620-4803639 | None:intergenic | 35.0% |
| TGCAAGCAAACAAGCATAAA+GGG | - | chr6_4:4803824-4803843 | None:intergenic | 35.0% | |
| !!! | TGCTTGCAGATTTTTTGCAA+TGG | + | chr6_4:4803836-4803855 | Msa0972500:intron | 35.0% |
| CAAAAACAAGCCAATCCAAA+CGG | + | chr6_4:4804280-4804299 | Msa0972500:intron | 35.0% | |
| TTGAACTACTAGAGCATGTT+TGG | + | chr6_4:4804330-4804349 | Msa0972500:intron | 35.0% | |
| TTGTGTAGTACTAGCATAAG+CGG | + | chr6_4:4804369-4804388 | Msa0972500:intron | 35.0% | |
| TGAGACTGTTTGAGAGTTTA+AGG | + | chr6_4:4804392-4804411 | Msa0972500:intron | 35.0% | |
| ! | CTTATGGTAATGTCATAAGC+TGG | - | chr6_4:4804420-4804439 | None:intergenic | 35.0% |
| TGTGATGTTGAACCACTAAA+CGG | + | chr6_4:4804676-4804695 | Msa0972500:intron | 35.0% | |
| TCATTTATAAAGGGCCTCTT+TGG | + | chr6_4:4804702-4804721 | Msa0972500:intron | 35.0% | |
| ! | GCTTATTTCTTCATCCAAAG+AGG | - | chr6_4:4804719-4804738 | None:intergenic | 35.0% |
| !! | AAGAAGACATGGTTGTTTTC+AGG | - | chr6_4:4805069-4805088 | None:intergenic | 35.0% |
| CCAAAACAACAAAGAAGACA+TGG | - | chr6_4:4805080-4805099 | None:intergenic | 35.0% | |
| !!! | CCATGTCTTCTTTGTTGTTT+TGG | + | chr6_4:4805077-4805096 | Msa0972500:intron | 35.0% |
| ! | AGTGTTTTCATTTTCCAAGC+AGG | + | chr6_4:4805129-4805148 | Msa0972500:intron | 35.0% |
| TTCTTTACCTCAAGAAACTG+AGG | + | chr6_4:4805186-4805205 | Msa0972500:CDS | 35.0% | |
| ! | AAAGTGTCTCAAACCTGATA+AGG | - | chr6_4:4805304-4805323 | None:intergenic | 35.0% |
| AGGCCTTTATCCAATATAAG+AGG | - | chr6_4:4805370-4805389 | None:intergenic | 35.0% | |
| AGCTAACAATATCAAGCCTT+TGG | - | chr6_4:4805553-4805572 | None:intergenic | 35.0% | |
| ATTCGCAATTGACAACATTG+AGG | - | chr6_4:4805605-4805624 | None:intergenic | 35.0% | |
| ACAATCCAACATAATAAGGG+AGG | - | chr6_4:4805792-4805811 | None:intergenic | 35.0% | |
| TGTTGGATTGTATTGCATAG+TGG | + | chr6_4:4805801-4805820 | Msa0972500:intron | 35.0% | |
| ATCTTGCGATCTCTTTAATG+AGG | - | chr6_4:4805982-4806001 | None:intergenic | 35.0% | |
| AAGGTAATAATTCCTGGTTG+AGG | - | chr6_4:4806048-4806067 | None:intergenic | 35.0% | |
| ATACATGTCTGATACGTCTT+TGG | - | chr6_4:4806078-4806097 | None:intergenic | 35.0% | |
| AAGACGTATCAGACATGTAT+CGG | + | chr6_4:4806078-4806097 | Msa0972500:intron | 35.0% | |
| TTACGGAGGAAGAACTAATA+TGG | + | chr6_4:4806237-4806256 | Msa0972500:CDS | 35.0% | |
| CTAGTGTGAGTTGTAAACTT+TGG | + | chr6_4:4806305-4806324 | Msa0972500:intron | 35.0% | |
| CACCGAATATTACCAAAGAA+AGG | + | chr6_4:4806350-4806369 | Msa0972500:intron | 35.0% | |
| ATAAGCAATGAGCCTTTCTT+TGG | - | chr6_4:4806365-4806384 | None:intergenic | 35.0% | |
| TTGCAAAGGAATCATGCTAT+AGG | + | chr6_4:4806457-4806476 | Msa0972500:intron | 35.0% | |
| AAGATCCGAAAGCCATAAAA+TGG | - | chr6_4:4806747-4806766 | None:intergenic | 35.0% | |
| ! | CTTGATTTGACCTTGTTGAT+CGG | + | chr6_4:4806771-4806790 | Msa0972500:intron | 35.0% |
| TAAAGTATGTATGTGGCACT+AGG | + | chr6_4:4806825-4806844 | Msa0972500:intron | 35.0% | |
| TCTTGTAGACTTGAGTTTGA+TGG | + | chr6_4:4807119-4807138 | Msa0972500:CDS | 35.0% | |
| GCATCAATGTTGTTAAGTAG+TGG | + | chr6_4:4807470-4807489 | Msa0972500:intron | 35.0% | |
| GGCGAGATTTGAAAAATACT+AGG | - | chr6_4:4807626-4807645 | None:intergenic | 35.0% | |
| CCAATATAGGTATCAAGAGA+GGG | - | chr6_4:4807647-4807666 | None:intergenic | 35.0% | |
| ACCAATATAGGTATCAAGAG+AGG | - | chr6_4:4807648-4807667 | None:intergenic | 35.0% | |
| TGTAACAGATTCAGGGTATA+TGG | + | chr6_4:4807748-4807767 | Msa0972500:intron | 35.0% | |
| TTAGACGTTACATTGGCATT+TGG | + | chr6_4:4807935-4807954 | Msa0972500:intron | 35.0% | |
| TTGTGGAAATCATGACAGTT+TGG | - | chr6_4:4808256-4808275 | None:intergenic | 35.0% | |
| GTGTTAGAGACTATAGAGAA+CGG | - | chr6_4:4808291-4808310 | None:intergenic | 35.0% | |
| GAGATTTAAGTGGTGCAAAA+AGG | - | chr6_4:4808313-4808332 | None:intergenic | 35.0% | |
| ! | TTTTCACTAGCTGAAGACAA+AGG | - | chr6_4:4808537-4808556 | None:intergenic | 35.0% |
| AATGTCGCATAAGATTTCTC+TGG | - | chr6_4:4808637-4808656 | None:intergenic | 35.0% | |
| GTATTGCTTAGCTTAATGCA+AGG | + | chr6_4:4808727-4808746 | Msa0972500:intron | 35.0% | |
| TCCACTAAGTAATAGAACTC+GGG | - | chr6_4:4808865-4808884 | None:intergenic | 35.0% | |
| !! | TATTATTGGTGTTAACCCTC+CGG | - | chr6_4:4808958-4808977 | None:intergenic | 35.0% |
| AAGAAGATGAGTCACTTACT+TGG | - | chr6_4:4809695-4809714 | None:intergenic | 35.0% | |
| CTGTAACAAACCTTTCACTA+CGG | + | chr6_4:4810590-4810609 | Msa0972500:intron | 35.0% | |
| GTACAAAAGGAGAATACAGT+TGG | + | chr6_4:4810790-4810809 | Msa0972500:intron | 35.0% | |
| GTACAAAAGGAGAATACAGT+TGG | + | chr6_4:4810790-4810809 | Msa0972500:intron | 35.0% | |
| GACAAATAGGCATTTACCTA+TGG | + | chr6_4:4811335-4811354 | Msa0972500:intron | 35.0% | |
| ! | AGACTTTTACCTACGGAAAA+AGG | + | chr6_4:4811393-4811412 | Msa0972500:intron | 35.0% |
| ! | ACTAAATGTCCTTTTTCCGT+AGG | - | chr6_4:4811405-4811424 | None:intergenic | 35.0% |
| GGAAAAAGGACATTTAGTGA+CGG | + | chr6_4:4811407-4811426 | Msa0972500:intron | 35.0% | |
| TCGTGTATCCTTCAATTTGA+TGG | + | chr6_4:4811610-4811629 | Msa0972500:intron | 35.0% | |
| TTGATGCACCATCAAATTGA+AGG | - | chr6_4:4811621-4811640 | None:intergenic | 35.0% | |
| ! | GTTTGTTGAAAATGGGAATC+TGG | + | chr6_4:4811678-4811697 | Msa0972500:intron | 35.0% |
| TTGAATCAAGCAATCCAGAA+AGG | + | chr6_4:4811869-4811888 | Msa0972500:intron | 35.0% | |
| !! | CTCACAACTTGTTATCAATC+AGG | + | chr6_4:4811919-4811938 | Msa0972500:intron | 35.0% |
| !!! | ATTGGTTTTGTAACAGCTTC+AGG | + | chr6_4:4812010-4812029 | Msa0972500:intron | 35.0% |
| !!! | TTGGTTTTGTAACAGCTTCA+GGG | + | chr6_4:4812011-4812030 | Msa0972500:intron | 35.0% |
| TAAATACCTTAGGAACGTGT+TGG | - | chr6_4:4812121-4812140 | None:intergenic | 35.0% | |
| AAGCTAATGCTCAAGCAAAT+CGG | + | chr6_4:4812266-4812285 | Msa0972500:CDS | 35.0% | |
| TATAGGAAACTAAGGTCTTG+AGG | - | chr6_4:4812314-4812333 | None:intergenic | 35.0% | |
| TTCATATTGGTATGTGATGG+GGG | + | chr6_4:4812491-4812510 | Msa0972500:intron | 35.0% | |
| TGGGGGGACATAAAATTTAA+TGG | + | chr6_4:4812508-4812527 | Msa0972500:intron | 35.0% | |
| !!! | GTGGCCAATAGTTTTTTAAG+TGG | - | chr6_4:4812608-4812627 | None:intergenic | 35.0% |
| CTGCAAGCAAACAAGCATAA+AGG | - | chr6_4:4803825-4803844 | None:intergenic | 40.0% | |
| TATGTTCTTCTCCCAGCTTA+TGG | + | chr6_4:4804054-4804073 | Msa0972500:intron | 40.0% | |
| AAACCACTCATGAGACTGTT+TGG | + | chr6_4:4804759-4804778 | Msa0972500:intron | 40.0% | |
| AACCACTCATGAGACTGTTT+GGG | + | chr6_4:4804760-4804779 | Msa0972500:intron | 40.0% | |
| !! | AGACATGGTTGTTTTCAGGA+AGG | - | chr6_4:4805065-4805084 | None:intergenic | 40.0% |
| ! | TCATTTTCCAAGCAGGTTTC+TGG | + | chr6_4:4805136-4805155 | Msa0972500:intron | 40.0% |
| AGATACTCCTCAGTTTCTTG+AGG | - | chr6_4:4805196-4805215 | None:intergenic | 40.0% | |
| TCTTGTCTCACATGGACTTA+AGG | + | chr6_4:4805213-4805232 | Msa0972500:CDS | 40.0% | |
| CTTGTCTCACATGGACTTAA+GGG | + | chr6_4:4805214-4805233 | Msa0972500:CDS | 40.0% | |
| ! | CATGTAAATGCGGGTAGTTT+TGG | + | chr6_4:4805262-4805281 | Msa0972500:CDS | 40.0% |
| !! | ACTTGCTGTTTGTCCTTATC+AGG | + | chr6_4:4805288-4805307 | Msa0972500:CDS | 40.0% |
| ATGTCGTCACCGATAATCAT+TGG | + | chr6_4:4805402-4805421 | Msa0972500:intron | 40.0% | |
| GAATCGACACTTCACATTGA+AGG | - | chr6_4:4805500-4805519 | None:intergenic | 40.0% | |
| CCTTTGGACACACAAAACAA+GGG | - | chr6_4:4805537-4805556 | None:intergenic | 40.0% | |
| CGAATCGCAAATGACAATAG+TGG | + | chr6_4:4805620-4805639 | Msa0972500:intron | 40.0% | |
| GCTATAACGCTGTAGCATAA+TGG | - | chr6_4:4805658-4805677 | None:intergenic | 40.0% | |
| ACAGCGTTATAGCTGTAACT+TGG | + | chr6_4:4805665-4805684 | Msa0972500:intron | 40.0% | |
| TGCGTATCACAGAACAATAG+TGG | + | chr6_4:4805706-4805725 | Msa0972500:intron | 40.0% | |
| AAACTTGCCAGAGACACAAA+TGG | - | chr6_4:4805872-4805891 | None:intergenic | 40.0% | |
| GTCTCTGGCAAGTTTGTAAT+TGG | + | chr6_4:4805877-4805896 | Msa0972500:intron | 40.0% | |
| TTTCAGGATCCATGTTCTTC+AGG | + | chr6_4:4805933-4805952 | Msa0972500:intron | 40.0% | |
| ! | TATCAGACATGTATCGGTGT+CGG | + | chr6_4:4806084-4806103 | Msa0972500:intron | 40.0% |
| GTTCTTCCTCCGTAAGAATA+TGG | - | chr6_4:4806232-4806251 | None:intergenic | 40.0% | |
| TCGGTGAAAATTCATGGTTG+AGG | - | chr6_4:4806336-4806355 | None:intergenic | 40.0% | |
| CAAAGGAATCATGCTATAGG+TGG | + | chr6_4:4806460-4806479 | Msa0972500:intron | 40.0% | |
| CCAGAAAATTCCGATCAACA+AGG | - | chr6_4:4806784-4806803 | None:intergenic | 40.0% | |
| ! | CCTTGTTGATCGGAATTTTC+TGG | + | chr6_4:4806781-4806800 | Msa0972500:intron | 40.0% |
| TGTATGCACTCATTCACAAG+TGG | + | chr6_4:4806938-4806957 | Msa0972500:intron | 40.0% | |
| TAACTGCCATGTCTCTTCTT+AGG | + | chr6_4:4807276-4807295 | Msa0972500:intron | 40.0% | |
| GATAGACCTAAGAAGAGACA+TGG | - | chr6_4:4807285-4807304 | None:intergenic | 40.0% | |
| TATAAGCACATCCGTGTTCA+AGG | + | chr6_4:4807394-4807413 | Msa0972500:intron | 40.0% | |
| CCCTCTCTTGATACCTATAT+TGG | + | chr6_4:4807644-4807663 | Msa0972500:intron | 40.0% | |
| CGAATTATGCAATGAAGCCA+AGG | + | chr6_4:4807794-4807813 | Msa0972500:CDS | 40.0% | |
| ! | GACTTTTCTGAGTTCCCTAT+CGG | + | chr6_4:4808200-4808219 | Msa0972500:intron | 40.0% |
| ! | GGATTTTGAACTTTTGCAGC+TGG | + | chr6_4:4808451-4808470 | Msa0972500:intron | 40.0% |
| ! | TGATCAACTAGGAGCATACA+TGG | + | chr6_4:4808505-4808524 | Msa0972500:intron | 40.0% |
| ACCCGAGTTCTATTACTTAG+TGG | + | chr6_4:4808861-4808880 | Msa0972500:intron | 40.0% | |
| GGCACTAACAATCAGAAGTT+CGG | - | chr6_4:4808921-4808940 | None:intergenic | 40.0% | |
| GACGAAATTCACACATGAAG+TGG | - | chr6_4:4809277-4809296 | None:intergenic | 40.0% | |
| ACAAGAGAAAGATCACGATG+CGG | + | chr6_4:4809664-4809683 | Msa0972500:intron | 40.0% | |
| !! | TGTGTCGATATTAGTTTGCC+TGG | + | chr6_4:4809772-4809791 | Msa0972500:intron | 40.0% |
| CAGAACACGCCTAATCTAAA+GGG | - | chr6_4:4809867-4809886 | None:intergenic | 40.0% | |
| TCAGAACACGCCTAATCTAA+AGG | - | chr6_4:4809868-4809887 | None:intergenic | 40.0% | |
| GCTTCAAATGAGAAGCTGTT+AGG | - | chr6_4:4810199-4810218 | None:intergenic | 40.0% | |
| ATCCGTGCTTCATAGGTTAA+AGG | + | chr6_4:4810443-4810462 | Msa0972500:intron | 40.0% | |
| AGCCTTTAACCTATGAAGCA+CGG | - | chr6_4:4810448-4810467 | None:intergenic | 40.0% | |
| GTAGAAGATACCGTAGTGAA+AGG | - | chr6_4:4810603-4810622 | None:intergenic | 40.0% | |
| ! | GTATTCTCCTTTTGTACGTG+TGG | - | chr6_4:4810787-4810806 | None:intergenic | 40.0% |
| ! | GTATTCTCCTTTTGTACGTG+TGG | - | chr6_4:4810787-4810806 | None:intergenic | 40.0% |
| GGTAAATGCCTATTTGTCTG+TGG | - | chr6_4:4811333-4811352 | None:intergenic | 40.0% | |
| TTTATAGTTTCCAACAGGGC+CGG | - | chr6_4:4811534-4811553 | None:intergenic | 40.0% | |
| TAGCTATATCAATTCCGCGA+AGG | + | chr6_4:4811794-4811813 | Msa0972500:intron | 40.0% | |
| ! | ATGTGGGTTGTTCATTTCCA+TGG | - | chr6_4:4812039-4812058 | None:intergenic | 40.0% |
| AGCTAATGCTCAAGCAAATC+GGG | + | chr6_4:4812267-4812286 | Msa0972500:CDS | 40.0% | |
| AATCGGGCTATCAATCTAAG+AGG | + | chr6_4:4812283-4812302 | Msa0972500:CDS | 40.0% | |
| ! | TCATATTGGTATGTGATGGG+GGG | + | chr6_4:4812492-4812511 | Msa0972500:intron | 40.0% |
| ! | TTCTGTATTTAGGGCCCGTT+TGG | + | chr6_4:4804084-4804103 | Msa0972500:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | + | chr6_4:4804089-4804108 | Msa0972500:intron | 45.0% |
| AACTAAGGGACCGTTTGGAT+TGG | - | chr6_4:4804293-4804312 | None:intergenic | 45.0% | |
| TGCATAACTAAGGGACCGTT+TGG | - | chr6_4:4804298-4804317 | None:intergenic | 45.0% | |
| GAGCTCCATTTAGGCCAATT+TGG | - | chr6_4:4805002-4805021 | None:intergenic | 45.0% | |
| !! | GAGGAGTATCTTGTCTCACA+TGG | + | chr6_4:4805205-4805224 | Msa0972500:CDS | 45.0% |
| !! | AGCAGCACTGATAGAGTAAG+TGG | - | chr6_4:4805242-4805261 | None:intergenic | 45.0% |
| ! | CAGTGCTGCTCATGTAAATG+CGG | + | chr6_4:4805252-4805271 | Msa0972500:CDS | 45.0% |
| ! | AGTGCTGCTCATGTAAATGC+GGG | + | chr6_4:4805253-4805272 | Msa0972500:CDS | 45.0% |
| ATGGCTGACACCTATACATG+TGG | - | chr6_4:4805452-4805471 | None:intergenic | 45.0% | |
| CATGTATAGGTGTCAGCCAT+CGG | + | chr6_4:4805452-4805471 | Msa0972500:intron | 45.0% | |
| ! | TTGAAGGTGTGTTCAGTGTC+CGG | - | chr6_4:4805484-4805503 | None:intergenic | 45.0% |
| !!! | CCCTTGTTTTGTGTGTCCAA+AGG | + | chr6_4:4805534-4805553 | Msa0972500:intron | 45.0% |
| GCCTTTGGACACACAAAACA+AGG | - | chr6_4:4805538-4805557 | None:intergenic | 45.0% | |
| ! | GCTTATGCCATTTGTGTCTC+TGG | + | chr6_4:4805862-4805881 | Msa0972500:intron | 45.0% |
| TTCAGGAGGAGGAACTGTTA+TGG | + | chr6_4:4805950-4805969 | Msa0972500:CDS | 45.0% | |
| CAGGATCCATATTCTTACGG+AGG | + | chr6_4:4806223-4806242 | Msa0972500:intron | 45.0% | |
| TCCTCATCGAAGAGCTTTCA+AGG | + | chr6_4:4806265-4806284 | Msa0972500:CDS | 45.0% | |
| ACCTTGAAAGCTCTTCGATG+AGG | - | chr6_4:4806269-4806288 | None:intergenic | 45.0% | |
| ! | CACACTAGCATCAAGTTGTG+TGG | - | chr6_4:4806293-4806312 | None:intergenic | 45.0% |
| GGAGCTTGGACGTAATCTTA+TGG | - | chr6_4:4806892-4806911 | None:intergenic | 45.0% | |
| !! | AGTTTGATGGTGCGTGCAAA+GGG | + | chr6_4:4807132-4807151 | Msa0972500:CDS | 45.0% |
| CTATACTGCGTGCTGAAGAT+GGG | + | chr6_4:4807180-4807199 | Msa0972500:CDS | 45.0% | |
| TAGGTCTATCGTTTGCGTGA+AGG | + | chr6_4:4807295-4807314 | Msa0972500:intron | 45.0% | |
| TATCGTTTGCGTGAAGGAGT+TGG | + | chr6_4:4807301-4807320 | Msa0972500:intron | 45.0% | |
| AGGGTACACTCTTAGTCACT+TGG | + | chr6_4:4807861-4807880 | Msa0972500:intron | 45.0% | |
| AACCTTGGAGATTTAACGCG+CGG | - | chr6_4:4808171-4808190 | None:intergenic | 45.0% | |
| !! | AACGGAGCAACGTTGTTTTG+TGG | - | chr6_4:4808273-4808292 | None:intergenic | 45.0% |
| ! | TTGAACTTTTGCAGCTGGTC+AGG | + | chr6_4:4808456-4808475 | Msa0972500:intron | 45.0% |
| GCTGCGAGGTAAGTTAAGTA+TGG | - | chr6_4:4808899-4808918 | None:intergenic | 45.0% | |
| TGTTAACCCTCCGGTTACTA+GGG | - | chr6_4:4808949-4808968 | None:intergenic | 45.0% | |
| CAAGAGAAAGATCACGATGC+GGG | + | chr6_4:4809665-4809684 | Msa0972500:intron | 45.0% | |
| AAGAGAAAGATCACGATGCG+GGG | + | chr6_4:4809666-4809685 | Msa0972500:intron | 45.0% | |
| GCACGAACACCCTTTAGATT+AGG | + | chr6_4:4809855-4809874 | Msa0972500:intron | 45.0% | |
| GATTAGGCGTGTTCTGATGT+CGG | + | chr6_4:4809871-4809890 | Msa0972500:intron | 45.0% | |
| ACGACACCACCAACACATAT+AGG | + | chr6_4:4809918-4809937 | Msa0972500:intron | 45.0% | |
| CGACACCACCAACACATATA+GGG | + | chr6_4:4809919-4809938 | Msa0972500:intron | 45.0% | |
| ! | CATATAGGGCCCGTTTGTTA+CGG | + | chr6_4:4809933-4809952 | Msa0972500:intron | 45.0% |
| TAGAGACACCTGACATGACA+CGG | - | chr6_4:4810424-4810443 | None:intergenic | 45.0% | |
| TGTCTCTATCCGTGCTTCAT+AGG | + | chr6_4:4810436-4810455 | Msa0972500:intron | 45.0% | |
| CCTAACGTAGTAATCGGAGT+CGG | - | chr6_4:4810820-4810839 | None:intergenic | 45.0% | |
| CCTAACGTAGTAATCGGAGT+CGG | - | chr6_4:4810820-4810839 | None:intergenic | 45.0% | |
| CTTAGAGGGGCCTCAAAATT+TGG | - | chr6_4:4811469-4811488 | None:intergenic | 45.0% | |
| ! | TTGAGGCCCCTCTAAGTTTT+AGG | + | chr6_4:4811473-4811492 | Msa0972500:intron | 45.0% |
| ACAGGGCCTAAAACTTAGAG+GGG | - | chr6_4:4811482-4811501 | None:intergenic | 45.0% | |
| CACAGGGCCTAAAACTTAGA+GGG | - | chr6_4:4811483-4811502 | None:intergenic | 45.0% | |
| GGTGCATCAAGTGAAAATCC+TGG | + | chr6_4:4811631-4811650 | Msa0972500:intron | 45.0% | |
| ATATCAATTCCGCGAAGGAC+TGG | + | chr6_4:4811799-4811818 | Msa0972500:intron | 45.0% | |
| TATCAATTCCGCGAAGGACT+GGG | + | chr6_4:4811800-4811819 | Msa0972500:intron | 45.0% | |
| ! | GAGTATCGCGCTTTGATCTT+AGG | + | chr6_4:4811845-4811864 | Msa0972500:intron | 45.0% |
| !! | ATGGTGGGTATCTACAAGTG+TGG | - | chr6_4:4812669-4812688 | None:intergenic | 45.0% |
| !!! | TTTTTTTATTTGTTTAAATT+TGG | + | chr6_4:4810924-4810943 | Msa0972500:intron | 5.0% |
| !!! | ATATATTTTTTTACAATAAT+AGG | - | chr6_4:4812364-4812383 | None:intergenic | 5.0% |
| !!! | AATTTATATGTTTTAAATAT+TGG | - | chr6_4:4813178-4813197 | None:intergenic | 5.0% |
| CTCCCAAACAGTCTCATGAG+TGG | - | chr6_4:4804765-4804784 | None:intergenic | 50.0% | |
| AGCTTCACCAGAAACCTGCT+TGG | - | chr6_4:4805146-4805165 | None:intergenic | 50.0% | |
| GACGACATGCAGTGCTTCAT+AGG | - | chr6_4:4805390-4805409 | None:intergenic | 50.0% | |
| CAGGATCCATGTTCTTCAGG+AGG | + | chr6_4:4805936-4805955 | Msa0972500:intron | 50.0% | |
| GATCCATGTTCTTCAGGAGG+AGG | + | chr6_4:4805939-4805958 | Msa0972500:CDS | 50.0% | |
| GTTCCTCCTCCTGAAGAACA+TGG | - | chr6_4:4805945-4805964 | None:intergenic | 50.0% | |
| CGGGCAATTAATAGGGAGCT+TGG | - | chr6_4:4806906-4806925 | None:intergenic | 50.0% | |
| !! | GAGTTTGATGGTGCGTGCAA+AGG | + | chr6_4:4807131-4807150 | Msa0972500:CDS | 50.0% |
| GCTATACTGCGTGCTGAAGA+TGG | + | chr6_4:4807179-4807198 | Msa0972500:CDS | 50.0% | |
| AACCTGATTGCACACGAGCA+GGG | - | chr6_4:4807425-4807444 | None:intergenic | 50.0% | |
| AAACCTGATTGCACACGAGC+AGG | - | chr6_4:4807426-4807445 | None:intergenic | 50.0% | |
| AACCGCGCGTTAAATCTCCA+AGG | + | chr6_4:4808166-4808185 | Msa0972500:CDS | 50.0% | |
| GTGTTAACCCTCCGGTTACT+AGG | - | chr6_4:4808950-4808969 | None:intergenic | 50.0% | |
| ATGTCGGACATGTGTCGTGT+CGG | + | chr6_4:4809887-4809906 | Msa0972500:intron | 50.0% | |
| !! | ATGTGTTGGTGGTGTCGTGT+CGG | - | chr6_4:4809916-4809935 | None:intergenic | 50.0% |
| CAAACGGGCCCTATATGTGT+TGG | - | chr6_4:4809930-4809949 | None:intergenic | 50.0% | |
| CCGACTCCGATTACTACGTT+AGG | + | chr6_4:4810817-4810836 | Msa0972500:intron | 50.0% | |
| CCGACTCCGATTACTACGTT+AGG | + | chr6_4:4810817-4810836 | Msa0972500:intron | 50.0% | |
| ACGGCCCTGGTTTCCAATTT+AGG | - | chr6_4:4811233-4811252 | None:intergenic | 50.0% | |
| GCACAGGGCCTAAAACTTAG+AGG | - | chr6_4:4811484-4811503 | None:intergenic | 50.0% | |
| !!! | AAGTTTTAGGCCCTGTGCCA+AGG | + | chr6_4:4811486-4811505 | Msa0972500:intron | 50.0% |
| !!! | AGTTTTAGGCCCTGTGCCAA+GGG | + | chr6_4:4811487-4811506 | Msa0972500:intron | 50.0% |
| AGTGAAAATCCTGGACCAGC+TGG | + | chr6_4:4811640-4811659 | Msa0972500:intron | 50.0% | |
| AATACAACTCCTGCACCAGC+TGG | - | chr6_4:4811658-4811677 | None:intergenic | 50.0% | |
| ! | TTTGATAGCCCAGTCCTTCG+CGG | - | chr6_4:4811811-4811830 | None:intergenic | 50.0% |
| GTAACAGCTTCAGGGATCCA+TGG | + | chr6_4:4812019-4812038 | Msa0972500:intron | 50.0% | |
| CAGCATCCAACACGTTCCTA+AGG | + | chr6_4:4812112-4812131 | Msa0972500:intron | 50.0% | |
| !! | TATCGGTGTCGGATGCGTGT+CGG | + | chr6_4:4806095-4806114 | Msa0972500:intron | 55.0% |
| CGTGTCGGACACCGATACTT+TGG | + | chr6_4:4806110-4806129 | Msa0972500:intron | 55.0% | |
| AAAGGGAATCCTGGACCAGC+TGG | + | chr6_4:4807149-4807168 | Msa0972500:CDS | 55.0% | |
| AGTATAGCTCCAGCACCAGC+TGG | - | chr6_4:4807167-4807186 | None:intergenic | 55.0% | |
| GCAGGGAGTCTCCTTGAACA+CGG | - | chr6_4:4807408-4807427 | None:intergenic | 55.0% | |
| CAATCAGAAGTTCGGCTGCG+AGG | - | chr6_4:4808913-4808932 | None:intergenic | 55.0% | |
| GTGCCCCTTTCCCTAGTAAC+CGG | + | chr6_4:4808936-4808955 | Msa0972500:intron | 55.0% | |
| CCTCCGGTTACTAGGGAAAG+GGG | - | chr6_4:4808942-4808961 | None:intergenic | 55.0% | |
| CCCTCCGGTTACTAGGGAAA+GGG | - | chr6_4:4808943-4808962 | None:intergenic | 55.0% | |
| CCCTTTCCCTAGTAACCGGA+GGG | + | chr6_4:4808940-4808959 | Msa0972500:intron | 55.0% | |
| ACCCTCCGGTTACTAGGGAA+AGG | - | chr6_4:4808944-4808963 | None:intergenic | 55.0% | |
| ACGGGCCCTATATGTGTTGG+TGG | - | chr6_4:4809927-4809946 | None:intergenic | 55.0% | |
| AACGGGGTCTCCGAATTGTC+GGG | - | chr6_4:4811257-4811276 | None:intergenic | 55.0% | |
| CAACGGGGTCTCCGAATTGT+CGG | - | chr6_4:4811258-4811277 | None:intergenic | 55.0% | |
| TGCAAGTGCATCAAGGCCCT+TGG | - | chr6_4:4811506-4811525 | None:intergenic | 55.0% | |
| GGCCTTGATGCACTTGCACA+GGG | + | chr6_4:4811508-4811527 | Msa0972500:intron | 55.0% | |
| TTGATGCACTTGCACAGGGC+CGG | + | chr6_4:4811512-4811531 | Msa0972500:intron | 55.0% | |
| TGTCAGCCATCGGCATGTGC+CGG | + | chr6_4:4805462-4805481 | Msa0972500:intron | 60.0% | |
| GGTGCGTGCAAAGGGAATCC+TGG | + | chr6_4:4807140-4807159 | Msa0972500:CDS | 60.0% | |
| AATCCTGGACCAGCTGGTGC+TGG | + | chr6_4:4807155-4807174 | Msa0972500:CDS | 60.0% | |
| GCGTGCTGAAGATGGGAGCA+AGG | + | chr6_4:4807187-4807206 | Msa0972500:CDS | 60.0% | |
| CTCCCTGCTCGTGTGCAATC+AGG | + | chr6_4:4807420-4807439 | Msa0972500:intron | 60.0% | |
| CCCCTTTCCCTAGTAACCGG+AGG | + | chr6_4:4808939-4808958 | Msa0972500:intron | 60.0% | |
| GTCAGCGTCCGTGTCATGTC+AGG | + | chr6_4:4810413-4810432 | Msa0972500:intron | 60.0% | |
| GGTCTCCGAATTGTCGGGGA+CGG | - | chr6_4:4811252-4811271 | None:intergenic | 60.0% | |
| ACGGGGTCTCCGAATTGTCG+GGG | - | chr6_4:4811256-4811275 | None:intergenic | 60.0% | |
| GCATCAAGGCCCTTGGCACA+GGG | - | chr6_4:4811499-4811518 | None:intergenic | 60.0% | |
| TGCATCAAGGCCCTTGGCAC+AGG | - | chr6_4:4811500-4811519 | None:intergenic | 60.0% | |
| GGGCCTTGATGCACTTGCAC+AGG | + | chr6_4:4811507-4811526 | Msa0972500:intron | 60.0% | |
| GGCCCTGTGCAAGTGCATCA+AGG | - | chr6_4:4811513-4811532 | None:intergenic | 60.0% | |
| AATCCTGGACCAGCTGGTGC+AGG | + | chr6_4:4807155-4807174 | Msa0972500:CDS | 60.0% | |
| CAGTGTCCGGCACATGCCGA+TGG | - | chr6_4:4805471-4805490 | None:intergenic | 65.0% | |
| CAGGGCCGTCCCCGACAATT+CGG | + | chr6_4:4811244-4811263 | Msa0972500:intron | 65.0% | |
| ACTCCTGCACCAGCTGGTCC+AGG | - | chr6_4:4811652-4811671 | None:intergenic | 65.0% | |
| GCTCCAGCACCAGCTGGTCC+AGG | - | chr6_4:4807161-4807180 | None:intergenic | 70.0% | |
| CGAATTGTCGGGGACGGCCC+TGG | - | chr6_4:4811246-4811265 | None:intergenic | 70.0% | |
| TTGCACAGGGCCGGCCCTGT+TGG | + | chr6_4:4811521-4811540 | Msa0972500:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 4803590 | 4813315 | 4803590 | ID=Msa0972500;Name=Msa0972500 |
| chr6_4 | mRNA | 4803590 | 4813315 | 4803590 | ID=Msa0972500-mRNA-1;Parent=Msa0972500;Name=Msa0972500-mRNA-1;_AED=0.26;_eAED=0.26;_QI=154|0.63|0.66|0.83|0.63|0.66|12|0|253 |
| chr6_4 | exon | 4803590 | 4803733 | 4803590 | ID=Msa0972500-mRNA-1:exon:2073;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4803845 | 4803953 | 4803845 | ID=Msa0972500-mRNA-1:exon:2074;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4805151 | 4805309 | 4805151 | ID=Msa0972500-mRNA-1:exon:2075;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4805939 | 4806022 | 4805939 | ID=Msa0972500-mRNA-1:exon:2076;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4806226 | 4806309 | 4806226 | ID=Msa0972500-mRNA-1:exon:2077;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4806424 | 4806429 | 4806424 | ID=Msa0972500-mRNA-1:exon:2078;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4807116 | 4807208 | 4807116 | ID=Msa0972500-mRNA-1:exon:2079;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4807756 | 4807863 | 4807756 | ID=Msa0972500-mRNA-1:exon:2080;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4808136 | 4808187 | 4808136 | ID=Msa0972500-mRNA-1:exon:2081;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4808470 | 4808477 | 4808470 | ID=Msa0972500-mRNA-1:exon:2082;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4812253 | 4812304 | 4812253 | ID=Msa0972500-mRNA-1:exon:2083;Parent=Msa0972500-mRNA-1 |
| chr6_4 | exon | 4813302 | 4813315 | 4813302 | ID=Msa0972500-mRNA-1:exon:2084;Parent=Msa0972500-mRNA-1 |
| chr6_4 | five_prime_UTR | 4803590 | 4803733 | 4803590 | ID=Msa0972500-mRNA-1:five_prime_utr;Parent=Msa0972500-mRNA-1 |
| chr6_4 | five_prime_UTR | 4803845 | 4803854 | 4803845 | ID=Msa0972500-mRNA-1:five_prime_utr;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4803855 | 4803953 | 4803855 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4805151 | 4805309 | 4805151 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4805939 | 4806022 | 4805939 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4806226 | 4806309 | 4806226 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4806424 | 4806429 | 4806424 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4807116 | 4807208 | 4807116 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4807756 | 4807863 | 4807756 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4808136 | 4808187 | 4808136 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4808470 | 4808477 | 4808470 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4812253 | 4812304 | 4812253 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| chr6_4 | CDS | 4813302 | 4813315 | 4813302 | ID=Msa0972500-mRNA-1:cds;Parent=Msa0972500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
