AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0978330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0978330 MtrunA17_Chr6g0457221 78.893 777 70 5 5 730 1 734 0.0 1166
Msa0978330 MtrunA17_Chr6g0457161 68.651 504 93 3 258 730 165 634 0.0 659
Msa0978330 MtrunA17_Chr6g0457161 58.571 210 44 4 5 171 1 210 1.26e-60 215
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0978330 AT5G38690.2 41.912 408 222 9 318 721 161 557 1.08e-80 268
Msa0978330 AT5G38690.2 42.202 109 34 1 39 118 21 129 1.50e-18 90.5
Msa0978330 AT5G38690.1 41.912 408 222 9 318 721 161 557 1.08e-80 268
Msa0978330 AT5G38690.1 42.202 109 34 1 39 118 21 129 1.50e-18 90.5
Msa0978330 AT1G67780.2 37.771 323 185 6 405 721 186 498 1.39e-53 193
Msa0978330 AT1G67780.2 50.000 114 28 1 28 112 13 126 1.66e-25 111
Msa0978330 AT1G67780.1 37.771 323 185 6 405 721 186 498 1.39e-53 193
Msa0978330 AT1G67780.1 50.000 114 28 1 28 112 13 126 1.66e-25 111
Msa0978330 AT1G67270.1 38.782 312 180 4 404 713 181 483 2.04e-53 192
Msa0978330 AT1G67270.1 46.491 114 32 1 28 112 5 118 5.07e-23 103

Find 173 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGCGGTGTTCGTGTTAT+TGG 0.176136 6_4:-14195915 Msa0978330:CDS
ATAGGTTTAAAGGTTATAAA+TGG 0.179392 6_4:-14192496 Msa0978330:CDS
GAGCTTGTGGTAGATCTATT+TGG 0.184927 6_4:-14192861 Msa0978330:intron
CATGGATGATGGTTACATTT+TGG 0.186468 6_4:-14188212 Msa0978330:three_prime_UTR
AATCATTATACCCCAATATT+TGG 0.188788 6_4:+14188273 None:intergenic
AAACTCATGGTTGAAAGTTT+TGG 0.234305 6_4:-14189973 Msa0978330:CDS
CCTACTGAATTCTGCTTCAT+AGG 0.236786 6_4:+14192216 None:intergenic
GAAGAGATTGAAAATTGATT+TGG 0.249896 6_4:+14196188 None:intergenic
ATCGATTATGGATACTAAAA+TGG 0.255046 6_4:-14196012 Msa0978330:exon
ACTTGTGGCAGAACTTAATT+TGG 0.257589 6_4:+14194218 None:intergenic
AAGAGATTGAAAATTGATTT+GGG 0.259270 6_4:+14196189 None:intergenic
CGGTGGAAACATAGGTTTAA+AGG 0.266465 6_4:-14192506 Msa0978330:CDS
AAAGAAGGCTTCTGAAAGTT+TGG 0.270786 6_4:-14193109 Msa0978330:CDS
TTCCAGAGTAGCTTCCTTAC+AGG 0.278283 6_4:+14193063 None:intergenic
AGGTGAAAACATAGGTTTAA+AGG 0.283661 6_4:-14191864 Msa0978330:CDS
TGGCAAGGCTTCCCAGTTCT+TGG 0.285176 6_4:+14194238 None:intergenic
CCGTCGGATTGGCTTAATAA+AGG 0.290448 6_4:-14189909 Msa0978330:CDS
AGGTGAAGACATAGGTTTAA+AGG 0.292587 6_4:-14192196 Msa0978330:CDS
AGGTGGAAACAAAGGTTTAA+AGG 0.298135 6_4:-14192815 Msa0978330:CDS
GAGCTTGTAGTGGATCTATC+TGG 0.299492 6_4:-14192553 Msa0978330:CDS
GAGCTTGTAGTGGATCTATC+TGG 0.303761 6_4:-14191911 Msa0978330:CDS
TCAAAGTCAACAGTTTGATT+TGG 0.305707 6_4:+14190175 None:intergenic
ATAACAATGGTAAGGCATTC+TGG 0.307965 6_4:-14188722 Msa0978330:CDS
ACCTAGTGAATTCAGCTTCC+CGG 0.316117 6_4:+14192834 None:intergenic
GATGCAGATTGACCAAATAT+TGG 0.317390 6_4:-14188285 Msa0978330:three_prime_UTR
CCCGTTTCAGAATTTGCTTT+TGG 0.321715 6_4:+14191123 None:intergenic
AATGCGGTGTTCGTGTTATT+GGG 0.323913 6_4:-14195914 Msa0978330:CDS
CGAATCTATGATTCTGCTAA+TGG 0.333356 6_4:-14195888 Msa0978330:CDS
ATGCAGATTGACCAAATATT+GGG 0.341380 6_4:-14188284 Msa0978330:three_prime_UTR
GCCACAAGTGCCTCTTGAAC+AGG 0.347791 6_4:-14194204 Msa0978330:intron
TTAGAATTCTGCAGATTGTT+TGG 0.349053 6_4:-14190812 Msa0978330:CDS
AAAGAAAGCAGCAAAGTCTA+AGG 0.350593 6_4:-14189665 Msa0978330:CDS
CTGTAATATTTGTAATAGTA+AGG 0.362953 6_4:-14188307 Msa0978330:three_prime_UTR
GGGGATTTGTGTGCTGTGTT+TGG 0.368871 6_4:+14196209 None:intergenic
AGTGAAGCGGGAAAACTTAA+AGG 0.370001 6_4:-14191241 Msa0978330:CDS
AGCTTGTGGTAGATCTATTT+GGG 0.373820 6_4:-14192860 Msa0978330:intron
AATTAGTTACCATTTGTAAC+TGG 0.377031 6_4:-14188344 Msa0978330:three_prime_UTR
GCAAAAGCTGTTGTATCAAA+TGG 0.390668 6_4:-14189486 Msa0978330:CDS
GGTAGATCTATTTGGGAAAC+CGG 0.393683 6_4:-14192853 Msa0978330:intron
ACATTTCATCTAGGAGAGAT+TGG 0.394349 6_4:-14188477 Msa0978330:CDS
AATGCATTCCCAACATCTTC+TGG 0.397485 6_4:+14190842 None:intergenic
CCAAAAGCAAATTCTGAAAC+GGG 0.403615 6_4:-14191123 Msa0978330:CDS
GAGAATCGAGCCGGAGTACT+TGG 0.407702 6_4:-14188745 Msa0978330:CDS
GTGGATCTATCTGGGGAACC+TGG 0.413007 6_4:-14191902 Msa0978330:CDS
GCTTGTAAGAATCCAAGAAC+TGG 0.414838 6_4:-14194250 Msa0978330:CDS
AAGTCTTAAGCAAAAGTTGC+AGG 0.414891 6_4:-14189517 Msa0978330:CDS
CCTACTGAATTCTGCTTCCC+AGG 0.418681 6_4:+14191884 None:intergenic
TAGGTTTAAAGGTTATAAAT+GGG 0.423216 6_4:-14192495 Msa0978330:CDS
TAGCAGGTTGAAGTCAGCTT+TGG 0.429807 6_4:+14188451 None:intergenic
GTTCATTCAGCCAAGGCATC+CGG 0.430095 6_4:-14193159 Msa0978330:CDS
AAGCTACTAAAATGTAATGA+AGG 0.441155 6_4:-14188418 Msa0978330:three_prime_UTR
CCGACTGAATTCTGCTTCAC+AGG 0.443080 6_4:+14192526 None:intergenic
GAGCTTGTAGTGGATCTATC+CGG 0.450636 6_4:-14192243 Msa0978330:CDS
AGTTTGCACCAGAAGATGTT+GGG 0.451171 6_4:-14190850 Msa0978330:CDS
CTCTTTGTATTGTGAGGTGG+CGG 0.453099 6_4:+14196158 None:intergenic
TGATAGAGACAAGACTCCTT+AGG 0.453765 6_4:-14188376 Msa0978330:three_prime_UTR
GAAACTACAATAGAAAGTTT+AGG 0.455167 6_4:+14191162 None:intergenic
GAAAACATAGGTTTAAAGGT+TGG 0.464712 6_4:-14191860 Msa0978330:CDS
TTTATTTGTGATGAAGCCTT+GGG 0.467960 6_4:-14189834 Msa0978330:CDS
ACCAAAAGCAAATTCTGAAA+CGG 0.474696 6_4:-14191124 Msa0978330:CDS
GGAGTTAGTGCTTCAAAGGT+TGG 0.475203 6_4:-14191282 Msa0978330:CDS
TTTACCATTTGTCTGGGACT+TGG 0.476747 6_4:+14190949 None:intergenic
TTCATAAGTACATTTCATCT+AGG 0.477960 6_4:-14188486 Msa0978330:CDS
GTCTAAGGTTTCTGAAGCTA+AGG 0.481278 6_4:-14189650 Msa0978330:CDS
AAAGTTAAAGGAACCTACTC+TGG 0.481429 6_4:-14192758 Msa0978330:CDS
TAAGAGAATTTCCGTCGGAT+TGG 0.484574 6_4:-14189920 Msa0978330:CDS
CGAATGGAAAGAAATTGAAT+CGG 0.484997 6_4:-14195944 Msa0978330:CDS
TGCTCAGGAACTGTTGTGAT+AGG 0.488259 6_4:-14190992 Msa0978330:intron
TAATGGCAAAACTTGTCATC+AGG 0.489532 6_4:-14195871 Msa0978330:intron
AGGTGGAGTTAGTGCTTCAA+AGG 0.490042 6_4:-14191286 Msa0978330:CDS
AAAGGAACCTACTCTGGAAA+AGG 0.490225 6_4:-14192752 Msa0978330:intron
AAAGGAAGATACTCTGGAAA+AGG 0.490343 6_4:-14192443 Msa0978330:intron
AAAGTTAAAGGAAGATACTC+TGG 0.491926 6_4:-14192449 Msa0978330:CDS
TAGCTTTAAATATTTCTAGC+AGG 0.492331 6_4:+14188435 None:intergenic
TGGCTTAATAAAGGCATAAG+TGG 0.493521 6_4:-14189900 Msa0978330:CDS
AATTCAGTCGGTGGAAACAT+AGG 0.494166 6_4:-14192514 Msa0978330:CDS
AGCTTGTAGTGGATCTATCT+GGG 0.497046 6_4:-14191910 Msa0978330:CDS
AGCTTGTAGTGGATCTATCT+GGG 0.497046 6_4:-14192552 Msa0978330:CDS
TGCCTGTAAGGAAGCTACTC+TGG 0.497096 6_4:-14193065 Msa0978330:CDS
AGAGTTGAAACCGGATGCCT+TGG 0.498717 6_4:+14193149 None:intergenic
TAAGGAAGCTACTCTGGAAA+AGG 0.500456 6_4:-14193059 Msa0978330:intron
AGCTTGTAGTGGATCTATCC+GGG 0.503801 6_4:-14192242 Msa0978330:CDS
TGCTGACACAGAGTTGAAAC+CGG 0.505301 6_4:+14193140 None:intergenic
TAAAAGAAACCAGTTACAAA+TGG 0.506218 6_4:+14188335 None:intergenic
AAGTTAAAGGAAGCTACTCT+TGG 0.506407 6_4:-14192138 Msa0978330:CDS
GGTTTCTGAAGCTAAGGAAA+AGG 0.511109 6_4:-14189644 Msa0978330:intron
TTGATATATTCAGGAAGCTA+AGG 0.515389 6_4:-14189726 Msa0978330:intron
CTTTCTATTGTAGTTTCAGA+GGG 0.521199 6_4:-14191156 Msa0978330:CDS
CACAAGAACTGAATGTGAAA+GGG 0.523171 6_4:-14195974 Msa0978330:CDS
GATTTGGAACTCAACCACTA+AGG 0.525815 6_4:+14190191 None:intergenic
GGTGCCAAGTCCCAGACAAA+TGG 0.526799 6_4:-14190953 Msa0978330:CDS
TTCTCACTGCATCACAATGT+TGG 0.527421 6_4:+14188763 None:intergenic
AAAGGAAGCTACTCTTGGAA+AGG 0.530237 6_4:-14192133 Msa0978330:intron
AGAAAACCAAGAAAGTGAAT+CGG 0.532959 6_4:-14192783 Msa0978330:CDS
GAGTTTGCACCAGAAGATGT+TGG 0.533090 6_4:-14190851 Msa0978330:CDS
ACTAATTACATTGAAACCTA+AGG 0.535283 6_4:+14188360 None:intergenic
GTCAGCAATGCTTAGAAAGA+AGG 0.535931 6_4:-14193124 Msa0978330:CDS
TGGCAGAACTTAATTTGGCA+AGG 0.536819 6_4:+14194223 None:intergenic
TCACAAGAACTGAATGTGAA+AGG 0.539022 6_4:-14195975 Msa0978330:CDS
TGGAGCTGAGCAGAAGGATG+AGG 0.539326 6_4:-14188509 Msa0978330:CDS
AGGATTACCTTGTAACATGT+AGG 0.543947 6_4:+14188671 None:intergenic
CTTCAACACCATCTTCATCA+TGG 0.545569 6_4:+14188554 None:intergenic
ATCATCAACACTGTTGCCAT+TGG 0.546992 6_4:+14191212 None:intergenic
TAGGCTCTTGATGTCAAGAA+AGG 0.547393 6_4:-14190276 Msa0978330:CDS
TCCCTCTTTGTATTGTGAGG+TGG 0.550429 6_4:+14196155 None:intergenic
ATTAAATGATGTATGTCTCA+TGG 0.551744 6_4:-14188230 Msa0978330:three_prime_UTR
ATAAACCAAACCTGTTCAAG+AGG 0.552710 6_4:+14194194 None:intergenic
TCTTTGTATTGTGAGGTGGC+GGG 0.553769 6_4:+14196159 None:intergenic
ACTGAGTTGATTGAGGCAAA+AGG 0.554447 6_4:-14189393 Msa0978330:CDS
GACTATGCCTACATGTTACA+AGG 0.555089 6_4:-14188678 Msa0978330:intron
ACTTTCTATTGTAGTTTCAG+AGG 0.555565 6_4:-14191157 Msa0978330:CDS
TGGATCTATCTGGGGAACCT+GGG 0.558717 6_4:-14191901 Msa0978330:CDS
ACCTGTTCAAGAGGCACTTG+TGG 0.559250 6_4:+14194203 None:intergenic
ACGTGGACAAAACACCTTAG+TGG 0.560975 6_4:-14190205 Msa0978330:CDS
AGCTCATACTGAGTTGATTG+AGG 0.563407 6_4:-14189400 Msa0978330:CDS
TATATTTCAGGAGCTTGTAG+TGG 0.563462 6_4:-14191921 Msa0978330:intron
TATATTTCAGGAGCTTGTAG+TGG 0.563462 6_4:-14192253 Msa0978330:intron
AAAGGAAACTACTCTAGGAA+AGG 0.563977 6_4:-14191801 Msa0978330:intron
ATTCTGCTTCATAGGTTCCC+CGG 0.564942 6_4:+14192224 None:intergenic
GAAAACCAAGAAAGTGAAGC+GGG 0.567532 6_4:-14191253 Msa0978330:CDS
GTACTTGGATAACAATGGTA+AGG 0.570868 6_4:-14188730 Msa0978330:CDS
AGCTACTAAAATGTAATGAA+GGG 0.574935 6_4:-14188417 Msa0978330:three_prime_UTR
TGTTTATGGAGCTGAGCAGA+AGG 0.575038 6_4:-14188515 Msa0978330:CDS
CTTGTAAGAATCCAAGAACT+GGG 0.576666 6_4:-14194249 Msa0978330:CDS
AGAAAACCAAGAAAGTGAAG+CGG 0.576898 6_4:-14191254 Msa0978330:CDS
AAGTTAAAGGAAACTACTCT+AGG 0.578905 6_4:-14191806 Msa0978330:CDS
AAAAGAGGTGAACAACCTAC+TGG 0.584751 6_4:-14193189 Msa0978330:CDS
CATCACAAATAAAATTCAGA+AGG 0.585281 6_4:+14189844 None:intergenic
GGTTCCCTCTTTGTATTGTG+AGG 0.591017 6_4:+14196152 None:intergenic
AAATACTTACATCGTGCCCA+AGG 0.591448 6_4:+14189818 None:intergenic
AATTCAGTAGGTGAAAACAT+AGG 0.596996 6_4:-14191872 Msa0978330:CDS
ATTCTGCAGATTGTTTGGAA+AGG 0.597032 6_4:-14190807 Msa0978330:intron
AATTCAGTAGGTGAAGACAT+AGG 0.600806 6_4:-14192204 Msa0978330:CDS
AGAGATTGAAAATTGATTTG+GGG 0.602098 6_4:+14196190 None:intergenic
TATAATACAGGAGCTTGTAG+TGG 0.603396 6_4:-14192563 Msa0978330:intron
ATAGGAGATGGTGACAATGC+TGG 0.603532 6_4:-14190974 Msa0978330:CDS
CCTATGAAGCAGAATTCAGT+AGG 0.603826 6_4:-14192216 Msa0978330:CDS
TGATGCAGTGAGAATCGAGC+CGG 0.604885 6_4:-14188754 Msa0978330:CDS
CATCGTGTTCTGAAATTGAG+AGG 0.604942 6_4:+14189457 None:intergenic
AACTTAAAGGAAATATCCAA+TGG 0.606792 6_4:-14191228 Msa0978330:CDS
TTGAAATTGAAATGAAGTAG+CGG 0.609746 6_4:+14196075 None:intergenic
TCAGCCATAACTGCTAGCAA+TGG 0.613966 6_4:-14189999 Msa0978330:CDS
CCTGGGAAGCAGAATTCAGT+AGG 0.614086 6_4:-14191884 Msa0978330:CDS
GATGTATGTCTCATGGATGA+TGG 0.615196 6_4:-14188223 Msa0978330:three_prime_UTR
CGCCACCTCACAATACAAAG+AGG 0.617328 6_4:-14196157 Msa0978330:five_prime_UTR
AATTCACTAGGTGGAAACAA+AGG 0.618686 6_4:-14192823 Msa0978330:CDS
CCATTGTTATCCAAGTACTC+CGG 0.619911 6_4:+14188735 None:intergenic
GTGAAAGGGAGTGATGCGAA+TGG 0.625227 6_4:-14195960 Msa0978330:CDS
TTTGGAATCGAACAATGCTG+TGG 0.625301 6_4:-14193091 Msa0978330:CDS
ATGAAGATCCATGATGAAGA+TGG 0.630584 6_4:-14188562 Msa0978330:CDS
AGAAAACCAAGACAATGAAG+CGG 0.634544 6_4:-14192164 Msa0978330:CDS
ACCGGGAAGCTGAATTCACT+AGG 0.643409 6_4:-14192835 Msa0978330:CDS
CCTGTGAAGCAGAATTCAGT+CGG 0.646326 6_4:-14192526 Msa0978330:CDS
GGAACTGTTGTGATAGGAGA+TGG 0.646822 6_4:-14190986 Msa0978330:CDS
CCGGAGTACTTGGATAACAA+TGG 0.653215 6_4:-14188735 Msa0978330:CDS
GTAGATCTATTTGGGAAACC+GGG 0.653700 6_4:-14192852 Msa0978330:intron
TGCAGATTGACCAAATATTG+GGG 0.654821 6_4:-14188283 Msa0978330:three_prime_UTR
GCCACCTCACAATACAAAGA+GGG 0.656800 6_4:-14196156 Msa0978330:five_prime_UTR
GTGAAGCAGAATTCAGTCGG+TGG 0.662427 6_4:-14192523 Msa0978330:CDS
GAATGAACTAGCATACCAGT+AGG 0.664052 6_4:+14193174 None:intergenic
TATGCTAGTTCATTCAGCCA+AGG 0.672151 6_4:-14193166 Msa0978330:CDS
CCTTTATTAAGCCAATCCGA+CGG 0.674604 6_4:+14189909 None:intergenic
GGAAAACCAAGACAATGAAG+CGG 0.677635 6_4:-14192474 Msa0978330:CDS
CAAAAGCAAATTCTGAAACG+GGG 0.680931 6_4:-14191122 Msa0978330:CDS
GCTTGTAGTGGATCTATCTG+GGG 0.681442 6_4:-14191909 Msa0978330:CDS
GCTTGTAGTGGATCTATCTG+GGG 0.681442 6_4:-14192551 Msa0978330:CDS
CGTAAGCAAAATTTGCGACG+TGG 0.687278 6_4:-14190222 Msa0978330:CDS
TTGAATCGGAACAATAAATG+CGG 0.688009 6_4:-14195930 Msa0978330:CDS
TGTACTAAGAGAATTTCCGT+CGG 0.691440 6_4:-14189925 Msa0978330:CDS
GCTTGTAGTGGATCTATCCG+GGG 0.698456 6_4:-14192241 Msa0978330:CDS
TTGTCATCTCAGTGCCAAGG+GGG 0.718267 6_4:+14190888 None:intergenic
GGGAAGCTGAATTCACTAGG+TGG 0.722903 6_4:-14192832 Msa0978330:CDS
TTTGTCATCTCAGTGCCAAG+GGG 0.736357 6_4:+14190887 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTAAAATTATTAT+CGG - chr6_4:14189043-14189062 Msa0978330:intron 0.0%
!!! TAATAAAGTTTTGAAATTTT+GGG + chr6_4:14188286-14188305 None:intergenic 10.0%
!!! TTAATAAAGTTTTGAAATTT+TGG + chr6_4:14188287-14188306 None:intergenic 10.0%
!! TTATTTACTTAAATTATTAC+CGG - chr6_4:14188749-14188768 Msa0978330:CDS 10.0%
!!! ATTTTTTAAAATTATTATCG+GGG - chr6_4:14189045-14189064 Msa0978330:intron 10.0%
!!! TTGAAAATTTTCTTATATAT+AGG + chr6_4:14192813-14192832 None:intergenic 10.0%
!!! AGAAAATTTTCAATTTTTTT+TGG - chr6_4:14192820-14192839 Msa0978330:CDS 10.0%
!! ATTACATGATATTAAAAAAA+TGG + chr6_4:14193921-14193940 None:intergenic 10.0%
!! AAAAGAAAAAATCAATTAAA+TGG + chr6_4:14193979-14193998 None:intergenic 10.0%
!!! TTTTATTTTCAGAATTATTC+TGG - chr6_4:14190264-14190283 Msa0978330:CDS 15.0%
!!! TTTATTTTCAGAATTATTCT+GGG - chr6_4:14190265-14190284 Msa0978330:CDS 15.0%
!! TTTCAATAGAATATATAAAG+AGG + chr6_4:14191760-14191779 None:intergenic 15.0%
!!! TCATATTTGTTATATATTTC+AGG - chr6_4:14192149-14192168 Msa0978330:CDS 15.0%
!!! TCATATTTGTTATATATTTC+AGG - chr6_4:14192149-14192168 Msa0978330:CDS 15.0%
!!! TGTGATATTTTCTTATAAAT+AGG + chr6_4:14192847-14192866 None:intergenic 15.0%
!! AAAGACAAACATTAAATAAA+GGG + chr6_4:14192908-14192927 None:intergenic 15.0%
!! AAAAGACAAACATTAAATAA+AGG + chr6_4:14192909-14192928 None:intergenic 15.0%
!!! AATGTTTGTCTTTTTAATAT+TGG - chr6_4:14192915-14192934 Msa0978330:intron 15.0%
!!! TTTGGTTTTTCTTATAAATA+AGG - chr6_4:14193035-14193054 Msa0978330:intron 15.0%
!!! ATAACCATTATTAATTTGAT+CGG + chr6_4:14193878-14193897 None:intergenic 15.0%
!! TTGAATTAAATTAAATTCTC+TGG - chr6_4:14194002-14194021 Msa0978330:intron 15.0%
!!! TTTATCACTTCATTTTTTAA+GGG - chr6_4:14194322-14194341 Msa0978330:intron 15.0%
!! AAAAATTATCCAAAAATAAC+CGG + chr6_4:14194385-14194404 None:intergenic 15.0%
!! TGAAATTGATTAAAAATTAG+AGG + chr6_4:14195090-14195109 None:intergenic 15.0%
!! AAAAAAAAAAAATCGATAGT+TGG - chr6_4:14195216-14195235 Msa0978330:intron 15.0%
!!! AAGAGATTGAAAATTGATTT+GGG + chr6_4:14188228-14188247 None:intergenic 20.0%
!!! TTTTGAAAATAAGCGATTTT+GGG + chr6_4:14188383-14188402 None:intergenic 20.0%
!!! ATTTTGAAAATAAGCGATTT+TGG + chr6_4:14188384-14188403 None:intergenic 20.0%
!!! CTTATTTTCAAAATCGATTA+TGG - chr6_4:14188390-14188409 Msa0978330:three_prime_UTR 20.0%
!! TCAACAAAAAAATGGAAATA+AGG + chr6_4:14188871-14188890 None:intergenic 20.0%
!! GAATCAAATCAACAAAAAAA+TGG + chr6_4:14188879-14188898 None:intergenic 20.0%
!!! TTTTTTTGTTGATTTGATTC+TGG - chr6_4:14188879-14188898 Msa0978330:intron 20.0%
!!! TTTTTTGTTGATTTGATTCT+GGG - chr6_4:14188880-14188899 Msa0978330:intron 20.0%
!! TATTTAGTAAAGTATGTTCT+TGG - chr6_4:14188956-14188975 Msa0978330:intron 20.0%
!!! ATTCCATTTTCTCAAATTAT+TGG - chr6_4:14189118-14189137 Msa0978330:intron 20.0%
!! GTAAAATTAAGAAGTAACAA+AGG - chr6_4:14189276-14189295 Msa0978330:intron 20.0%
!! ATAATGTATTGAACTGATAA+TGG - chr6_4:14189668-14189687 Msa0978330:CDS 20.0%
!!! AAATTTCTTTGATAGTTTGT+AGG - chr6_4:14189898-14189917 Msa0978330:CDS 20.0%
!!! AATTTCTTTGATAGTTTGTA+GGG - chr6_4:14189899-14189918 Msa0978330:CDS 20.0%
!! AATAAGAAAAGACATGAAAA+AGG + chr6_4:14189945-14189964 None:intergenic 20.0%
!! ATCAATCATAAAAACTACTA+TGG + chr6_4:14191509-14191528 None:intergenic 20.0%
!!! TCATACTTGTTATATAATAC+AGG - chr6_4:14191531-14191550 Msa0978330:intron 20.0%
!!! TAAGTTAACTTTGTTTTTGA+TGG - chr6_4:14191723-14191742 Msa0978330:intron 20.0%
!!! TTTGTTTTTGATGGTTAATA+AGG - chr6_4:14191732-14191751 Msa0978330:intron 20.0%
!! TATTCTATTGAAACTAAAGA+TGG - chr6_4:14191767-14191786 Msa0978330:intron 20.0%
!! TCATATCTGTTATATAATAC+AGG - chr6_4:14191839-14191858 Msa0978330:CDS 20.0%
!! ATAGGTTTAAAGGTTATAAA+TGG - chr6_4:14191918-14191937 Msa0978330:intron 20.0%
!! TAGGTTTAAAGGTTATAAAT+GGG - chr6_4:14191919-14191938 Msa0978330:intron 20.0%
!!! AGAAAATATCACAACTTTTA+AGG - chr6_4:14192854-14192873 Msa0978330:intron 20.0%
!!! TTTGTCTTTTTAATATTGGT+GGG - chr6_4:14192919-14192938 Msa0978330:intron 20.0%
!!! TTTTTCTTATAAATAAGGAC+CGG - chr6_4:14193040-14193059 Msa0978330:intron 20.0%
!! ATGATTTATAGTAAGATAGA+TGG - chr6_4:14193339-14193358 Msa0978330:intron 20.0%
!! TTTGCATGAAGAAAAAATTA+AGG - chr6_4:14193490-14193509 Msa0978330:intron 20.0%
!! AATAATGGTTATGCTATAAT+TGG - chr6_4:14193886-14193905 Msa0978330:intron 20.0%
!! ATAATGGTTATGCTATAATT+GGG - chr6_4:14193887-14193906 Msa0978330:intron 20.0%
!!! GTTTATCACTTCATTTTTTA+AGG - chr6_4:14194321-14194340 Msa0978330:intron 20.0%
!!! TTTTTGGATAATTTTTGTGT+AGG - chr6_4:14194389-14194408 Msa0978330:intron 20.0%
!! GACTATTATTCATAAGTAAA+GGG + chr6_4:14194637-14194656 None:intergenic 20.0%
!! AGACTATTATTCATAAGTAA+AGG + chr6_4:14194638-14194657 None:intergenic 20.0%
!!! TTTGTTTTTTGTTTTTGGAT+TGG - chr6_4:14194814-14194833 Msa0978330:intron 20.0%
!! GATTAAAAATTAGAGGATAT+GGG + chr6_4:14195083-14195102 None:intergenic 20.0%
!! TGATTAAAAATTAGAGGATA+TGG + chr6_4:14195084-14195103 None:intergenic 20.0%
!! CTGTAATATTTGTAATAGTA+AGG - chr6_4:14196107-14196126 Msa0978330:five_prime_UTR 20.0%
!!! AGAGATTGAAAATTGATTTG+GGG + chr6_4:14188227-14188246 None:intergenic 25.0%
! GAAGAGATTGAAAATTGATT+TGG + chr6_4:14188229-14188248 None:intergenic 25.0%
! TTGAAATTGAAATGAAGTAG+CGG + chr6_4:14188342-14188361 None:intergenic 25.0%
!! TTTGAAAATAAGCGATTTTG+GGG + chr6_4:14188382-14188401 None:intergenic 25.0%
! ATCGATTATGGATACTAAAA+TGG - chr6_4:14188402-14188421 Msa0978330:three_prime_UTR 25.0%
!! TTGATTTGATTCAGCTTATA+AGG - chr6_4:14188612-14188631 Msa0978330:intron 25.0%
! AAGTAATTTATGAGCTTCTT+TGG - chr6_4:14188832-14188851 Msa0978330:intron 25.0%
! ACACCAATAATTTGAGAAAA+TGG + chr6_4:14189124-14189143 None:intergenic 25.0%
! TGACATAATATATTGAACTG+AGG - chr6_4:14189251-14189270 Msa0978330:intron 25.0%
! AAATTAAGAAGTAACAAAGG+TGG - chr6_4:14189279-14189298 Msa0978330:intron 25.0%
! AATTAAGAAGTAACAAAGGT+GGG - chr6_4:14189280-14189299 Msa0978330:intron 25.0%
!!! TTTAGTTGATGGGTTATATT+TGG - chr6_4:14189425-14189444 Msa0978330:CDS 25.0%
!! CTTTAATTAACTTGAGTCTT+AGG + chr6_4:14189496-14189515 None:intergenic 25.0%
! GGAAGTAAAATTGTAAGTAT+AGG - chr6_4:14189602-14189621 Msa0978330:intron 25.0%
!!! TATTGAACTGATAATGGATT+GGG - chr6_4:14189674-14189693 Msa0978330:CDS 25.0%
!! TTTTGTGTGAATATGATGAA+TGG - chr6_4:14189759-14189778 Msa0978330:intron 25.0%
! TTTGTGTGAATATGATGAAT+GGG - chr6_4:14189760-14189779 Msa0978330:intron 25.0%
!! CTTTGTTATAGTTTGTAGAA+TGG - chr6_4:14190002-14190021 Msa0978330:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr6_4:14190667-14190686 Msa0978330:intron 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + chr6_4:14190792-14190811 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr6_4:14190809-14190828 Msa0978330:CDS 25.0%
! ATTCAACACACAAATATCAT+CGG + chr6_4:14191015-14191034 None:intergenic 25.0%
! TTGTGTGTTGAATTTAGATA+TGG - chr6_4:14191022-14191041 Msa0978330:intron 25.0%
! TAACCTTATAGGAAAAAAAG+AGG - chr6_4:14191210-14191229 Msa0978330:CDS 25.0%
!! GTGTTTGATGGTAATTAATA+AGG - chr6_4:14191426-14191445 Msa0978330:intron 25.0%
! TATGCAAATGAAACTAATGA+TGG - chr6_4:14191460-14191479 Msa0978330:intron 25.0%
!! GTTTGTCTTTTTAATATTGG+TGG - chr6_4:14192918-14192937 Msa0978330:intron 25.0%
!!! ATGCTTCACAATTTTTTATG+AGG - chr6_4:14192950-14192969 Msa0978330:intron 25.0%
!!! TGCTTCACAATTTTTTATGA+GGG - chr6_4:14192951-14192970 Msa0978330:intron 25.0%
! ACACTAATTAATGAGTGTAT+TGG - chr6_4:14193001-14193020 Msa0978330:intron 25.0%
!!! GTATTGGTTTTGATGTTTTT+TGG - chr6_4:14193017-14193036 Msa0978330:intron 25.0%
! GAAACTACAATAGAAAGTTT+AGG + chr6_4:14193255-14193274 None:intergenic 25.0%
!! CAAAATTTTACCATTTGTCT+GGG + chr6_4:14193474-14193493 None:intergenic 25.0%
!!! AGTGATTTTTTGCTTCTTTT+AGG - chr6_4:14193803-14193822 Msa0978330:intron 25.0%
!!! TTTTAGGTTTAGTTTGGTTT+AGG - chr6_4:14193819-14193838 Msa0978330:intron 25.0%
!! TCTAATATCAAGAAGTATGT+TGG + chr6_4:14193851-14193870 None:intergenic 25.0%
! TTCTCCGATCAAATTAATAA+TGG - chr6_4:14193871-14193890 Msa0978330:intron 25.0%
! ACTGTTACATCTGTTTAATA+TGG - chr6_4:14194072-14194091 Msa0978330:intron 25.0%
! TGATAAACAACAAGTGAAAA+GGG + chr6_4:14194309-14194328 None:intergenic 25.0%
!!! TTTACTTTGTATAGTTTGCT+TGG - chr6_4:14194354-14194373 Msa0978330:intron 25.0%
! CATCACAAATAAAATTCAGA+AGG + chr6_4:14194573-14194592 None:intergenic 25.0%
!! TTTATCCTGTTTAAAGTTGT+TGG - chr6_4:14194657-14194676 Msa0978330:intron 25.0%
!!! CTTGCTTTGTTTTTTGTTTT+TGG - chr6_4:14194809-14194828 Msa0978330:intron 25.0%
! ACAGAGTGTAATACTAATAA+TGG + chr6_4:14195247-14195266 None:intergenic 25.0%
!!! GTTAAGCTAATTTTGTTTTG+AGG + chr6_4:14195766-14195785 None:intergenic 25.0%
!!! GATGAAAAATGGTTTGTTTA+TGG - chr6_4:14195885-14195904 Msa0978330:CDS 25.0%
! TTCATAAGTACATTTCATCT+AGG - chr6_4:14195928-14195947 Msa0978330:CDS 25.0%
!!! TAGCTTTAAATATTTCTAGC+AGG + chr6_4:14195982-14196001 None:intergenic 25.0%
! AAGCTACTAAAATGTAATGA+AGG - chr6_4:14195996-14196015 Msa0978330:CDS 25.0%
! AGCTACTAAAATGTAATGAA+GGG - chr6_4:14195997-14196016 Msa0978330:CDS 25.0%
! ACTAATTACATTGAAACCTA+AGG + chr6_4:14196057-14196076 None:intergenic 25.0%
! AATTAGTTACCATTTGTAAC+TGG - chr6_4:14196070-14196089 Msa0978330:five_prime_UTR 25.0%
! TAAAAGAAACCAGTTACAAA+TGG + chr6_4:14196082-14196101 None:intergenic 25.0%
! AATCATTATACCCCAATATT+TGG + chr6_4:14196144-14196163 None:intergenic 25.0%
! ATTAAATGATGTATGTCTCA+TGG - chr6_4:14196184-14196203 Msa0978330:five_prime_UTR 25.0%
!!! TTTTGGGGTTTAAACGAAAT+GGG + chr6_4:14188367-14188386 None:intergenic 30.0%
!!! ATTTTGGGGTTTAAACGAAA+TGG + chr6_4:14188368-14188387 None:intergenic 30.0%
CGAATGGAAAGAAATTGAAT+CGG - chr6_4:14188470-14188489 Msa0978330:CDS 30.0%
TTGAATCGGAACAATAAATG+CGG - chr6_4:14188484-14188503 Msa0978330:CDS 30.0%
!! TTTCAAGTTCGAATCTATGT+AGG - chr6_4:14188690-14188709 Msa0978330:CDS 30.0%
TAAAATTATTATCGGGGTTG+CGG - chr6_4:14189051-14189070 Msa0978330:intron 30.0%
TGCTTCATAGGTTAAGATTA+GGG - chr6_4:14189184-14189203 Msa0978330:intron 30.0%
! AAGAAAGACTTGATTTTGCT+CGG - chr6_4:14189319-14189338 Msa0978330:intron 30.0%
TTATCTTCTGAATCTGATCA+TGG - chr6_4:14189400-14189419 Msa0978330:CDS 30.0%
GTAGATAATGAATTGAACTG+AGG - chr6_4:14189581-14189600 Msa0978330:intron 30.0%
!! GTATTGAACTGATAATGGAT+TGG - chr6_4:14189673-14189692 Msa0978330:CDS 30.0%
TTGTGTGAATATGATGAATG+GGG - chr6_4:14189761-14189780 Msa0978330:intron 30.0%
! ATGTCTTTTCTTATTCTGAG+AGG - chr6_4:14189950-14189969 Msa0978330:CDS 30.0%
AGAATCAACATGAACTTAAC+TGG + chr6_4:14190088-14190107 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr6_4:14190328-14190347 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG - chr6_4:14190331-14190350 Msa0978330:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr6_4:14190663-14190682 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr6_4:14190814-14190833 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr6_4:14190849-14190868 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr6_4:14190853-14190872 Msa0978330:CDS 30.0%
TCTTTGATAGAACATTATGG+CGG - chr6_4:14190856-14190875 Msa0978330:CDS 30.0%
TGAATTTAGATATGGTGAGA+AGG - chr6_4:14191030-14191049 Msa0978330:intron 30.0%
AGGTAGAACTATTGAATGAT+TGG - chr6_4:14191059-14191078 Msa0978330:intron 30.0%
!!! TTCAATATCCGTTTTGAGTT+TGG - chr6_4:14191136-14191155 Msa0978330:CDS 30.0%
! TTTTGTACCATTTTGTGTGT+TGG - chr6_4:14191173-14191192 Msa0978330:CDS 30.0%
TTCAAAACCAACACACAAAA+TGG + chr6_4:14191183-14191202 None:intergenic 30.0%
TGAAAGAAGAGTAACCTTAT+AGG - chr6_4:14191199-14191218 Msa0978330:CDS 30.0%
!!! TCACCTCTTTTTTTCCTATA+AGG + chr6_4:14191216-14191235 None:intergenic 30.0%
GTTTCATTTGCATACATAGA+AGG + chr6_4:14191454-14191473 None:intergenic 30.0%
TTATATAATACAGGAGCTTG+TGG - chr6_4:14191540-14191559 Msa0978330:intron 30.0%
AGAAAACCAAGAAAGTGAAT+CGG - chr6_4:14191631-14191650 Msa0978330:intron 30.0%
AGTGAATCGGAAAAAGTTAA+AGG - chr6_4:14191644-14191663 Msa0978330:intron 30.0%
ATGTGTCAACTACAGAAAAA+CGG + chr6_4:14191704-14191723 None:intergenic 30.0%
AATGAAGCGGAAAAAGTTAA+AGG - chr6_4:14191953-14191972 Msa0978330:intron 30.0%
AAAGTTAAAGGAAGATACTC+TGG - chr6_4:14191965-14191984 Msa0978330:intron 30.0%
CATAAGTTTACTTCGATTGA+TGG - chr6_4:14192030-14192049 Msa0978330:intron 30.0%
AATGAAGCGGAAAAAGTTAA+AGG - chr6_4:14191953-14191972 Msa0978330:intron 30.0%
AATTCAGTAGGTGAAAACAT+AGG - chr6_4:14192542-14192561 Msa0978330:CDS 30.0%
AGGTGAAAACATAGGTTTAA+AGG - chr6_4:14192550-14192569 Msa0978330:CDS 30.0%
GAAAACATAGGTTTAAAGGT+TGG - chr6_4:14192554-14192573 Msa0978330:CDS 30.0%
AGTGAAGCAGAAAAAGTTAA+AGG - chr6_4:14192595-14192614 Msa0978330:intron 30.0%
AAGTTAAAGGAAACTACTCT+AGG - chr6_4:14192608-14192627 Msa0978330:intron 30.0%
CGTAAGTTTACTTTGATTGA+TGG - chr6_4:14192672-14192691 Msa0978330:intron 30.0%
TGCAAAGTAGTTATTATGCT+TGG - chr6_4:14192761-14192780 Msa0978330:CDS 30.0%
! TTCATATTTGTTACTCCCTT+CGG - chr6_4:14192786-14192805 Msa0978330:CDS 30.0%
TTCTTATATATAGGACCGAA+GGG + chr6_4:14192804-14192823 None:intergenic 30.0%
TTTCTTATATATAGGACCGA+AGG + chr6_4:14192805-14192824 None:intergenic 30.0%
!!! GCTTTTTCGATTTCTTGTTT+TGG + chr6_4:14193233-14193252 None:intergenic 30.0%
ACTTTCTATTGTAGTTTCAG+AGG - chr6_4:14193257-14193276 Msa0978330:intron 30.0%
CTTTCTATTGTAGTTTCAGA+GGG - chr6_4:14193258-14193277 Msa0978330:intron 30.0%
! ACCAAAAGCAAATTCTGAAA+CGG - chr6_4:14193290-14193309 Msa0978330:intron 30.0%
ATGTATGAGAAAAATTGCTC+AGG - chr6_4:14193407-14193426 Msa0978330:intron 30.0%
! GCAAAATTTTACCATTTGTC+TGG + chr6_4:14193475-14193494 None:intergenic 30.0%
TTAGAATTCTGCAGATTGTT+TGG - chr6_4:14193602-14193621 Msa0978330:intron 30.0%
ACAAACTGAGTTCCAATAAA+GGG + chr6_4:14193636-14193655 None:intergenic 30.0%
AACAAACTGAGTTCCAATAA+AGG + chr6_4:14193637-14193656 None:intergenic 30.0%
! GCAAATTCTTTTAGTGCTAT+TGG - chr6_4:14193745-14193764 Msa0978330:intron 30.0%
TGTCACAAATCAAAGTTTGT+TGG - chr6_4:14193769-14193788 Msa0978330:intron 30.0%
!!! TGCTTCTTTTAGGTTTAGTT+TGG - chr6_4:14193813-14193832 Msa0978330:intron 30.0%
CCAATTGCAAAGTAAATCTA+AGG + chr6_4:14193956-14193975 None:intergenic 30.0%
CCTTAGATTTACTTTGCAAT+TGG - chr6_4:14193953-14193972 Msa0978330:intron 30.0%
ATCAAGAGCCTAATTATACA+TGG + chr6_4:14194130-14194149 None:intergenic 30.0%
TCAAAGTCAACAGTTTGATT+TGG + chr6_4:14194242-14194261 None:intergenic 30.0%
GTGATAAACAACAAGTGAAA+AGG + chr6_4:14194310-14194329 None:intergenic 30.0%
!!! TTCATTTTTTAAGGGTGAGA+GGG - chr6_4:14194330-14194349 Msa0978330:intron 30.0%
!! TATAGTTTGCTTGGAATAAC+CGG - chr6_4:14194363-14194382 Msa0978330:intron 30.0%
!! TTGGAATAACCGGTTATTTT+TGG - chr6_4:14194373-14194392 Msa0978330:intron 30.0%
! AAACTCATGGTTGAAAGTTT+TGG - chr6_4:14194441-14194460 Msa0978330:intron 30.0%
! ATTCAGAAGGATAAGCTTTT+TGG + chr6_4:14194560-14194579 None:intergenic 30.0%
!! TTTTATTTGTGATGAAGCCT+TGG - chr6_4:14194579-14194598 Msa0978330:intron 30.0%
TTTATTTGTGATGAAGCCTT+GGG - chr6_4:14194580-14194599 Msa0978330:intron 30.0%
AAGTTCCAACAACTTTAAAC+AGG + chr6_4:14194665-14194684 None:intergenic 30.0%
! GAACTTGCTTTGATATATTC+AGG - chr6_4:14194679-14194698 Msa0978330:intron 30.0%
TTGATATATTCAGGAAGCTA+AGG - chr6_4:14194688-14194707 Msa0978330:intron 30.0%
AAACATCACAACATACGTTT+AGG + chr6_4:14195054-14195073 None:intergenic 30.0%
TTTCTACTTGTTCACAACTT+GGG + chr6_4:14195178-14195197 None:intergenic 30.0%
! TTTTCTACTTGTTCACAACT+TGG + chr6_4:14195179-14195198 None:intergenic 30.0%
TTAGTATTACACTCTGTCTA+TGG - chr6_4:14195250-14195269 Msa0978330:intron 30.0%
TTATCTTCTGTTAACGTTGT+AGG - chr6_4:14195625-14195644 Msa0978330:intron 30.0%
TATCTTCTGTTAACGTTGTA+GGG - chr6_4:14195626-14195645 Msa0978330:intron 30.0%
GAATGATACCATTGAGATTT+AGG - chr6_4:14195792-14195811 Msa0978330:intron 30.0%
!! GTGTTGAAGTTGATGAAAAA+TGG - chr6_4:14195874-14195893 Msa0978330:CDS 30.0%
!!! AAGGGTCATTCCAATTTTTT+TGG - chr6_4:14196015-14196034 Msa0978330:exon 30.0%
GTCTCTATCACCAAAAAAAT+TGG + chr6_4:14196028-14196047 None:intergenic 30.0%
ATGCAGATTGACCAAATATT+GGG - chr6_4:14196130-14196149 Msa0978330:five_prime_UTR 30.0%
TCACAAGAACTGAATGTGAA+AGG - chr6_4:14188439-14188458 Msa0978330:exon 35.0%
CACAAGAACTGAATGTGAAA+GGG - chr6_4:14188440-14188459 Msa0978330:exon 35.0%
CGAATCTATGATTCTGCTAA+TGG - chr6_4:14188526-14188545 Msa0978330:CDS 35.0%
TAATGGCAAAACTTGTCATC+AGG - chr6_4:14188543-14188562 Msa0978330:CDS 35.0%
ACTTAAATTATTACCGGTGC+CGG - chr6_4:14188755-14188774 Msa0978330:CDS 35.0%
TGCGGTGTAAGTATCAATTT+CGG - chr6_4:14189069-14189088 Msa0978330:intron 35.0%
!! AATTATTGGTGTCGACTTGT+TGG - chr6_4:14189132-14189151 Msa0978330:intron 35.0%
GTCCTATGTTTGTTTAGTGT+TGG - chr6_4:14189161-14189180 Msa0978330:intron 35.0%
CACCAACACTAAACAAACAT+AGG + chr6_4:14189166-14189185 None:intergenic 35.0%
GTGCTTCATAGGTTAAGATT+AGG - chr6_4:14189183-14189202 Msa0978330:intron 35.0%
GCTTCATAGGTTAAGATTAG+GGG - chr6_4:14189185-14189204 Msa0978330:intron 35.0%
AATGAGCTCTTTGTTCAATG+TGG - chr6_4:14189218-14189237 Msa0978330:intron 35.0%
! AGAAAGACTTGATTTTGCTC+GGG - chr6_4:14189320-14189339 Msa0978330:intron 35.0%
TGATCATGGAGTTTAGTTGA+TGG - chr6_4:14189414-14189433 Msa0978330:CDS 35.0%
GATCATGGAGTTTAGTTGAT+GGG - chr6_4:14189415-14189434 Msa0978330:CDS 35.0%
ACACTTCAAACACCAATTGT+AGG + chr6_4:14189799-14189818 None:intergenic 35.0%
GCATAAACAGATGTTGTAAC+TGG - chr6_4:14189824-14189843 Msa0978330:intron 35.0%
!! TCTTTTCTTATTCTGAGAGG+TGG - chr6_4:14189953-14189972 Msa0978330:CDS 35.0%
!!! TGTAGAATGGTGTTGTTTTG+AGG - chr6_4:14190015-14190034 Msa0978330:intron 35.0%
!!! AAAAGTCCCTTGTTTTTTGC+CGG + chr6_4:14190139-14190158 None:intergenic 35.0%
CTTGTAAGAATCCAAGAACT+GGG - chr6_4:14190165-14190184 Msa0978330:CDS 35.0%
ACTTGTGGCAGAACTTAATT+TGG + chr6_4:14190199-14190218 None:intergenic 35.0%
ATAAACCAAACCTGTTCAAG+AGG + chr6_4:14190223-14190242 None:intergenic 35.0%
ATATCATACCCCAAGTTACA+CGG - chr6_4:14190316-14190335 Msa0978330:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr6_4:14190327-14190346 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr6_4:14190329-14190348 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG - chr6_4:14190330-14190349 Msa0978330:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr6_4:14190358-14190377 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr6_4:14190391-14190410 Msa0978330:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr6_4:14190456-14190475 Msa0978330:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr6_4:14190465-14190484 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr6_4:14190469-14190488 Msa0978330:intron 35.0%
AGACTAGACATGATAGGATT+AGG - chr6_4:14190604-14190623 Msa0978330:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr6_4:14190656-14190675 Msa0978330:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr6_4:14190676-14190695 Msa0978330:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr6_4:14190681-14190700 Msa0978330:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr6_4:14190733-14190752 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr6_4:14190734-14190753 Msa0978330:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr6_4:14190821-14190840 Msa0978330:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr6_4:14190833-14190852 Msa0978330:CDS 35.0%
! AAAGAAGGCTTCTGAAAGTT+TGG - chr6_4:14191305-14191324 Msa0978330:intron 35.0%
CATGAGTTAACTGTGTTTGA+TGG - chr6_4:14191414-14191433 Msa0978330:intron 35.0%
AGCTTGTGGTAGATCTATTT+GGG - chr6_4:14191554-14191573 Msa0978330:intron 35.0%
AATTCACTAGGTGGAAACAA+AGG - chr6_4:14191591-14191610 Msa0978330:intron 35.0%
AGGTGGAAACAAAGGTTTAA+AGG - chr6_4:14191599-14191618 Msa0978330:intron 35.0%
! CTTTTTCCGATTCACTTTCT+TGG + chr6_4:14191640-14191659 None:intergenic 35.0%
AAAGTTAAAGGAACCTACTC+TGG - chr6_4:14191656-14191675 Msa0978330:intron 35.0%
TATAATACAGGAGCTTGTAG+TGG - chr6_4:14191851-14191870 Msa0978330:CDS 35.0%
! AAAGGAAGATACTCTGGAAA+AGG - chr6_4:14191971-14191990 Msa0978330:intron 35.0%
TATATTTCAGGAGCTTGTAG+TGG - chr6_4:14192161-14192180 Msa0978330:CDS 35.0%
AATTCAGTAGGTGAAGACAT+AGG - chr6_4:14192210-14192229 Msa0978330:CDS 35.0%
AGGTGAAGACATAGGTTTAA+AGG - chr6_4:14192218-14192237 Msa0978330:CDS 35.0%
AGAAAACCAAGACAATGAAG+CGG - chr6_4:14192250-14192269 Msa0978330:intron 35.0%
AAGTTAAAGGAAGCTACTCT+TGG - chr6_4:14192276-14192295 Msa0978330:intron 35.0%
! CGTCAGTTTACTTTGTTTGA+TGG - chr6_4:14192342-14192361 Msa0978330:intron 35.0%
TATATTTCAGGAGCTTGTAG+TGG - chr6_4:14192161-14192180 Msa0978330:CDS 35.0%
! AAAGGAAACTACTCTAGGAA+AGG - chr6_4:14192613-14192632 Msa0978330:intron 35.0%
TTCTTATAAATAAGGACCGG+AGG - chr6_4:14193043-14193062 Msa0978330:intron 35.0%
TCTTATAAATAAGGACCGGA+GGG - chr6_4:14193044-14193063 Msa0978330:intron 35.0%
AGAAAACCAAGAAAGTGAAG+CGG - chr6_4:14193160-14193179 Msa0978330:CDS 35.0%
!! CCAAAAGCAAATTCTGAAAC+GGG - chr6_4:14193291-14193310 Msa0978330:intron 35.0%
!! CAAAAGCAAATTCTGAAACG+GGG - chr6_4:14193292-14193311 Msa0978330:intron 35.0%
ACAAAAATAGGGGAGAATCA+TGG - chr6_4:14193315-14193334 Msa0978330:intron 35.0%
ATTCTGCAGATTGTTTGGAA+AGG - chr6_4:14193607-14193626 Msa0978330:intron 35.0%
!! TTGGAAAGGTATCCCTTTAT+TGG - chr6_4:14193621-14193640 Msa0978330:intron 35.0%
TGAAAAGGGATAAACTCACT+CGG + chr6_4:14194295-14194314 None:intergenic 35.0%
!!! CTTCATTTTTTAAGGGTGAG+AGG - chr6_4:14194329-14194348 Msa0978330:intron 35.0%
! TTTTCCATTGCTAGCAGTTA+TGG + chr6_4:14194422-14194441 None:intergenic 35.0%
CTAGCAATGGAAAAAACTCA+TGG - chr6_4:14194428-14194447 Msa0978330:intron 35.0%
TGTACTAAGAGAATTTCCGT+CGG - chr6_4:14194489-14194508 Msa0978330:intron 35.0%
! TGGCTTAATAAAGGCATAAG+TGG - chr6_4:14194514-14194533 Msa0978330:intron 35.0%
AAAGAAAGCAGCAAAGTCTA+AGG - chr6_4:14194749-14194768 Msa0978330:intron 35.0%
GTTCTGTACATGTTATCTAC+AGG - chr6_4:14194870-14194889 Msa0978330:intron 35.0%
AAGTCTTAAGCAAAAGTTGC+AGG - chr6_4:14194897-14194916 Msa0978330:intron 35.0%
GCAAAAGCTGTTGTATCAAA+TGG - chr6_4:14194928-14194947 Msa0978330:intron 35.0%
!! AATGGAGTGTTGAAACCATA+TGG - chr6_4:14195402-14195421 Msa0978330:intron 35.0%
TTAGGCGAACTTTGTATCTA+TGG - chr6_4:14195472-14195491 Msa0978330:intron 35.0%
GTACTTGGATAACAATGGTA+AGG - chr6_4:14195684-14195703 Msa0978330:intron 35.0%
! ATAACAATGGTAAGGCATTC+TGG - chr6_4:14195692-14195711 Msa0978330:intron 35.0%
AGGATTACCTTGTAACATGT+AGG + chr6_4:14195746-14195765 None:intergenic 35.0%
TGCTATAGCCTAAATCTCAA+TGG + chr6_4:14195803-14195822 None:intergenic 35.0%
ATGAAGATCCATGATGAAGA+TGG - chr6_4:14195852-14195871 Msa0978330:intron 35.0%
ACATTTCATCTAGGAGAGAT+TGG - chr6_4:14195937-14195956 Msa0978330:CDS 35.0%
GATGCAGATTGACCAAATAT+TGG - chr6_4:14196129-14196148 Msa0978330:five_prime_UTR 35.0%
TGCAGATTGACCAAATATTG+GGG - chr6_4:14196131-14196150 Msa0978330:five_prime_UTR 35.0%
!! CATGGATGATGGTTACATTT+TGG - chr6_4:14196202-14196221 Msa0978330:five_prime_UTR 35.0%
AAATGCGGTGTTCGTGTTAT+TGG - chr6_4:14188499-14188518 Msa0978330:CDS 40.0%
! AATGCGGTGTTCGTGTTATT+GGG - chr6_4:14188500-14188519 Msa0978330:CDS 40.0%
ATAATCGCATGTGTCAGTGT+CGG + chr6_4:14188718-14188737 None:intergenic 40.0%
TGACACGACATTGATATGCA+TGG - chr6_4:14189005-14189024 Msa0978330:intron 40.0%
!! GTTTAGTGTTGGTGCTTCAT+AGG - chr6_4:14189172-14189191 Msa0978330:intron 40.0%
TGATGAATGGGGTTTGATCA+AGG - chr6_4:14189772-14189791 Msa0978330:intron 40.0%
GATGAATGGGGTTTGATCAA+GGG - chr6_4:14189773-14189792 Msa0978330:intron 40.0%
TTTGATCAAGGGCCTACAAT+TGG - chr6_4:14189784-14189803 Msa0978330:intron 40.0%
! GTTTTTCCACATTGAAGTGC+CGG - chr6_4:14190117-14190136 Msa0978330:intron 40.0%
GCTTGTAAGAATCCAAGAAC+TGG - chr6_4:14190164-14190183 Msa0978330:CDS 40.0%
! TGGCAGAACTTAATTTGGCA+AGG + chr6_4:14190194-14190213 None:intergenic 40.0%
TTATTCTGGGTCTACCTTAG+AGG - chr6_4:14190278-14190297 Msa0978330:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr6_4:14190288-14190307 Msa0978330:intron 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr6_4:14190295-14190314 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr6_4:14190351-14190370 Msa0978330:intron 40.0%
GTACATCATCGTATTCAAGC+TGG - chr6_4:14190390-14190409 Msa0978330:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr6_4:14190598-14190617 Msa0978330:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr6_4:14190629-14190648 Msa0978330:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr6_4:14190630-14190649 Msa0978330:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr6_4:14190631-14190650 Msa0978330:intron 40.0%
AGATCAAATGGAGTAGAGTC+AGG - chr6_4:14190746-14190765 Msa0978330:intron 40.0%
GAGTAGAGTCAGGTTAAAAG+AGG - chr6_4:14190756-14190775 Msa0978330:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr6_4:14190762-14190781 Msa0978330:intron 40.0%
CAGCATTTGCATGTAAGTTG+TGG - chr6_4:14191112-14191131 Msa0978330:CDS 40.0%
CCACAACACCAAACTCAAAA+CGG + chr6_4:14191147-14191166 None:intergenic 40.0%
AAAAGAGGTGAACAACCTAC+TGG - chr6_4:14191225-14191244 Msa0978330:CDS 40.0%
GAATGAACTAGCATACCAGT+AGG + chr6_4:14191243-14191262 None:intergenic 40.0%
TATGCTAGTTCATTCAGCCA+AGG - chr6_4:14191248-14191267 Msa0978330:CDS 40.0%
GTCAGCAATGCTTAGAAAGA+AGG - chr6_4:14191290-14191309 Msa0978330:intron 40.0%
! TTTGGAATCGAACAATGCTG+TGG - chr6_4:14191323-14191342 Msa0978330:intron 40.0%
! TAAGGAAGCTACTCTGGAAA+AGG - chr6_4:14191355-14191374 Msa0978330:intron 40.0%
GAGCTTGTGGTAGATCTATT+TGG - chr6_4:14191553-14191572 Msa0978330:intron 40.0%
GGTAGATCTATTTGGGAAAC+CGG - chr6_4:14191561-14191580 Msa0978330:intron 40.0%
GTAGATCTATTTGGGAAACC+GGG - chr6_4:14191562-14191581 Msa0978330:intron 40.0%
! AAAGGAACCTACTCTGGAAA+AGG - chr6_4:14191662-14191681 Msa0978330:intron 40.0%
!! AGCTTGTAGTGGATCTATCT+GGG - chr6_4:14191862-14191881 Msa0978330:CDS 40.0%
AATTCAGTCGGTGGAAACAT+AGG - chr6_4:14191900-14191919 Msa0978330:CDS 40.0%
CGGTGGAAACATAGGTTTAA+AGG - chr6_4:14191908-14191927 Msa0978330:CDS 40.0%
GGAAAACCAAGACAATGAAG+CGG - chr6_4:14191940-14191959 Msa0978330:intron 40.0%
! CTTTTTCCGCTTCATTGTCT+TGG + chr6_4:14191949-14191968 None:intergenic 40.0%
CCTACTGAATTCTGCTTCAT+AGG + chr6_4:14192201-14192220 None:intergenic 40.0%
CCTATGAAGCAGAATTCAGT+AGG - chr6_4:14192198-14192217 Msa0978330:CDS 40.0%
! CTTTTTCCGCTTCATTGTCT+TGG + chr6_4:14191949-14191968 None:intergenic 40.0%
AAAGGAAGCTACTCTTGGAA+AGG - chr6_4:14192281-14192300 Msa0978330:intron 40.0%
!! TTCTCTCCATTTTTCTGCAG+TGG - chr6_4:14192316-14192335 Msa0978330:intron 40.0%
!! AGCTTGTAGTGGATCTATCT+GGG - chr6_4:14191862-14191881 Msa0978330:CDS 40.0%
! CTTTTTCTGCTTCACTGTCT+TGG + chr6_4:14192591-14192610 None:intergenic 40.0%
TATACTACAGGAGGTTGTCT+TGG - chr6_4:14193071-14193090 Msa0978330:CDS 40.0%
ATACTACAGGAGGTTGTCTT+GGG - chr6_4:14193072-14193091 Msa0978330:CDS 40.0%
GAAAACCAAGAAAGTGAAGC+GGG - chr6_4:14193161-14193180 Msa0978330:CDS 40.0%
ATCATCAACACTGTTGCCAT+TGG + chr6_4:14193205-14193224 None:intergenic 40.0%
!! CCCGTTTCAGAATTTGCTTT+TGG + chr6_4:14193294-14193313 None:intergenic 40.0%
! TCTGAAACGGGGACAAAAAT+AGG - chr6_4:14193303-14193322 Msa0978330:intron 40.0%
CTGAAACGGGGACAAAAATA+GGG - chr6_4:14193304-14193323 Msa0978330:intron 40.0%
TGAAACGGGGACAAAAATAG+GGG - chr6_4:14193305-14193324 Msa0978330:intron 40.0%
! TTTACCATTTGTCTGGGACT+TGG + chr6_4:14193468-14193487 None:intergenic 40.0%
! TTTTGTCATCTCAGTGCCAA+GGG + chr6_4:14193531-14193550 None:intergenic 40.0%
! TTTTTGTCATCTCAGTGCCA+AGG + chr6_4:14193532-14193551 None:intergenic 40.0%
AGTTTGCACCAGAAGATGTT+GGG - chr6_4:14193564-14193583 Msa0978330:intron 40.0%
AATGCATTCCCAACATCTTC+TGG + chr6_4:14193575-14193594 None:intergenic 40.0%
GCCACTTGCCATGTATAATT+AGG - chr6_4:14194119-14194138 Msa0978330:intron 40.0%
GCCTAATTATACATGGCAAG+TGG + chr6_4:14194123-14194142 None:intergenic 40.0%
TAGGCTCTTGATGTCAAGAA+AGG - chr6_4:14194138-14194157 Msa0978330:intron 40.0%
! GATTTGGAACTCAACCACTA+AGG + chr6_4:14194226-14194245 None:intergenic 40.0%
TAAGAGAATTTCCGTCGGAT+TGG - chr6_4:14194494-14194513 Msa0978330:intron 40.0%
CCTTTATTAAGCCAATCCGA+CGG + chr6_4:14194508-14194527 None:intergenic 40.0%
AAATACTTACATCGTGCCCA+AGG + chr6_4:14194599-14194618 None:intergenic 40.0%
!! GTCTAAGGTTTCTGAAGCTA+AGG - chr6_4:14194764-14194783 Msa0978330:intron 40.0%
!! GGTTTCTGAAGCTAAGGAAA+AGG - chr6_4:14194770-14194789 Msa0978330:intron 40.0%
!! CATCGTGTTCTGAAATTGAG+AGG + chr6_4:14194960-14194979 None:intergenic 40.0%
!! AGCTCATACTGAGTTGATTG+AGG - chr6_4:14195014-14195033 Msa0978330:intron 40.0%
!! ACTGAGTTGATTGAGGCAAA+AGG - chr6_4:14195021-14195040 Msa0978330:intron 40.0%
AGTTGCTGATGAACCTTGAA+TGG - chr6_4:14195384-14195403 Msa0978330:intron 40.0%
TGGTTTCAACACTCCATTCA+AGG + chr6_4:14195400-14195419 None:intergenic 40.0%
ACTGCCACAGAGTATGATAT+TGG - chr6_4:14195433-14195452 Msa0978330:intron 40.0%
CACACCAATATCATACTCTG+TGG + chr6_4:14195440-14195459 None:intergenic 40.0%
!!! GGTGTGACACTTGCTATTTT+AGG - chr6_4:14195454-14195473 Msa0978330:intron 40.0%
TCGACTGATTGTATTGTGAC+TGG - chr6_4:14195500-14195519 Msa0978330:intron 40.0%
! ATTGTATTGTGACTGGTTGC+TGG - chr6_4:14195507-14195526 Msa0978330:intron 40.0%
TTCTCACTGCATCACAATGT+TGG + chr6_4:14195654-14195673 None:intergenic 40.0%
CCATTGTTATCCAAGTACTC+CGG + chr6_4:14195682-14195701 None:intergenic 40.0%
GACTATGCCTACATGTTACA+AGG - chr6_4:14195736-14195755 Msa0978330:intron 40.0%
CTTCAACACCATCTTCATCA+TGG + chr6_4:14195863-14195882 None:intergenic 40.0%
TGATAGAGACAAGACTCCTT+AGG - chr6_4:14196038-14196057 Msa0978330:five_prime_UTR 40.0%
GATGTATGTCTCATGGATGA+TGG - chr6_4:14196191-14196210 Msa0978330:five_prime_UTR 40.0%
TCTTTGTATTGTGAGGTGGC+GGG + chr6_4:14188258-14188277 None:intergenic 45.0%
CTCTTTGTATTGTGAGGTGG+CGG + chr6_4:14188259-14188278 None:intergenic 45.0%
GCCACCTCACAATACAAAGA+GGG - chr6_4:14188258-14188277 Msa0978330:three_prime_UTR 45.0%
TCCCTCTTTGTATTGTGAGG+TGG + chr6_4:14188262-14188281 None:intergenic 45.0%
GGTTCCCTCTTTGTATTGTG+AGG + chr6_4:14188265-14188284 None:intergenic 45.0%
CTGACACAACATTAACACGC+CGG + chr6_4:14188777-14188796 None:intergenic 45.0%
GTTGTGTCAGGTATCTGTGT+CGG - chr6_4:14188787-14188806 Msa0978330:intron 45.0%
! ACTTGATTTTGCTCGGGAAG+TGG - chr6_4:14189326-14189345 Msa0978330:intron 45.0%
! CTTGATTTTGCTCGGGAAGT+GGG - chr6_4:14189327-14189346 Msa0978330:intron 45.0%
! TTTTTGCCGGCACTTCAATG+TGG + chr6_4:14190126-14190145 None:intergenic 45.0%
!! TGAAGTGCCGGCAAAAAACA+AGG - chr6_4:14190129-14190148 Msa0978330:intron 45.0%
!! GAAGTGCCGGCAAAAAACAA+GGG - chr6_4:14190130-14190149 Msa0978330:intron 45.0%
AAGTGCCTCTTGAACAGGTT+TGG - chr6_4:14190215-14190234 Msa0978330:CDS 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr6_4:14190394-14190413 Msa0978330:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr6_4:14190403-14190422 Msa0978330:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr6_4:14190417-14190436 Msa0978330:intron 45.0%
CTTATCGCACAAAACACCTG+AGG + chr6_4:14190436-14190455 None:intergenic 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr6_4:14190503-14190522 Msa0978330:intron 45.0%
TCCGTACCATACAACATTGC+CGG + chr6_4:14190507-14190526 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr6_4:14190511-14190530 Msa0978330:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr6_4:14190512-14190531 Msa0978330:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr6_4:14190548-14190567 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr6_4:14190551-14190570 Msa0978330:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr6_4:14190632-14190651 Msa0978330:intron 45.0%
AACGCCTTATCCCACTAAGT+GGG + chr6_4:14190903-14190922 None:intergenic 45.0%
ATATGGTGAGAAGGCAGAAG+AGG - chr6_4:14191039-14191058 Msa0978330:intron 45.0%
GTTGCAAATGCTCTGCACTT+TGG + chr6_4:14191090-14191109 None:intergenic 45.0%
!!! CCGTTTTGAGTTTGGTGTTG+TGG - chr6_4:14191144-14191163 Msa0978330:CDS 45.0%
TGCTGACACAGAGTTGAAAC+CGG + chr6_4:14191277-14191296 None:intergenic 45.0%
!! ATGCTGTGGTTTTGCCTGTA+AGG - chr6_4:14191337-14191356 Msa0978330:intron 45.0%
TTCCAGAGTAGCTTCCTTAC+AGG + chr6_4:14191354-14191373 None:intergenic 45.0%
ACCTAGTGAATTCAGCTTCC+CGG + chr6_4:14191583-14191602 None:intergenic 45.0%
! CAACACACCTTTTCCAGAGT+AGG + chr6_4:14191365-14191384 None:intergenic 45.0%
!! GAGCTTGTAGTGGATCTATC+TGG - chr6_4:14191861-14191880 Msa0978330:CDS 45.0%
!! GCTTGTAGTGGATCTATCTG+GGG - chr6_4:14191863-14191882 Msa0978330:CDS 45.0%
CCTGTGAAGCAGAATTCAGT+CGG - chr6_4:14191888-14191907 Msa0978330:CDS 45.0%
TTCTCTCCATTGTTCTGCAG+TGG - chr6_4:14192004-14192023 Msa0978330:intron 45.0%
ATGTGTCCACTGCAGAACAA+TGG + chr6_4:14192013-14192032 None:intergenic 45.0%
!! GAGCTTGTAGTGGATCTATC+CGG - chr6_4:14191861-14191880 Msa0978330:CDS 45.0%
!! AGCTTGTAGTGGATCTATCC+GGG - chr6_4:14192172-14192191 Msa0978330:CDS 45.0%
ATTCTGCTTCATAGGTTCCC+CGG + chr6_4:14192193-14192212 None:intergenic 45.0%
ACGTGTCCACTGCAGAAAAA+TGG + chr6_4:14192325-14192344 None:intergenic 45.0%
!! GAGCTTGTAGTGGATCTATC+TGG - chr6_4:14191861-14191880 Msa0978330:CDS 45.0%
!! GCTTGTAGTGGATCTATCTG+GGG - chr6_4:14191863-14191882 Msa0978330:CDS 45.0%
CCTGTAGTATATACTCCCTC+CGG + chr6_4:14193062-14193081 None:intergenic 45.0%
! GAGGGAGTATATACTACAGG+AGG - chr6_4:14193062-14193081 Msa0978330:CDS 45.0%
TTGGGTCTATCAAGTGAACC+TGG - chr6_4:14193090-14193109 Msa0978330:CDS 45.0%
TGGGTCTATCAAGTGAACCT+GGG - chr6_4:14193091-14193110 Msa0978330:CDS 45.0%
! CCTAAGGAGTTTTCTTTCCC+AGG + chr6_4:14193111-14193130 None:intergenic 45.0%
CCTGGGAAAGAAAACTCCTT+AGG - chr6_4:14193108-14193127 Msa0978330:CDS 45.0%
GGGAAAGAAAACTCCTTAGG+TGG - chr6_4:14193111-14193130 Msa0978330:CDS 45.0%
! TGAAGCACTAACTCCACCTA+AGG + chr6_4:14193127-14193146 None:intergenic 45.0%
AGGTGGAGTTAGTGCTTCAA+AGG - chr6_4:14193128-14193147 Msa0978330:CDS 45.0%
GGAGTTAGTGCTTCAAAGGT+TGG - chr6_4:14193132-14193151 Msa0978330:CDS 45.0%
! GTTTTCCCGCTTCACTTTCT+TGG + chr6_4:14193169-14193188 None:intergenic 45.0%
TCATTTGCAGCGCAAGCATT+AGG + chr6_4:14193366-14193385 None:intergenic 45.0%
TGCTCAGGAACTGTTGTGAT+AGG - chr6_4:14193422-14193441 Msa0978330:intron 45.0%
GGAACTGTTGTGATAGGAGA+TGG - chr6_4:14193428-14193447 Msa0978330:intron 45.0%
ATAGGAGATGGTGACAATGC+TGG - chr6_4:14193440-14193459 Msa0978330:intron 45.0%
GAAGAAATTCCTTTCCCCCT+TGG - chr6_4:14193512-14193531 Msa0978330:intron 45.0%
TTTGTCATCTCAGTGCCAAG+GGG + chr6_4:14193530-14193549 None:intergenic 45.0%
GAGTTTGCACCAGAAGATGT+TGG - chr6_4:14193563-14193582 Msa0978330:intron 45.0%
CGTAAGCAAAATTTGCGACG+TGG - chr6_4:14194192-14194211 Msa0978330:intron 45.0%
ACGTGGACAAAACACCTTAG+TGG - chr6_4:14194209-14194228 Msa0978330:CDS 45.0%
TCAGCCATAACTGCTAGCAA+TGG - chr6_4:14194415-14194434 Msa0978330:intron 45.0%
!! CCGTCGGATTGGCTTAATAA+AGG - chr6_4:14194505-14194524 Msa0978330:intron 45.0%
GATACTCAGGGAGATACTCA+GGG + chr6_4:14195349-14195368 None:intergenic 45.0%
AGATACTCAGGGAGATACTC+AGG + chr6_4:14195350-14195369 None:intergenic 45.0%
CAACACAGTGCAGATACTCA+GGG + chr6_4:14195361-14195380 None:intergenic 45.0%
TCAACACAGTGCAGATACTC+AGG + chr6_4:14195362-14195381 None:intergenic 45.0%
TGGCAGTAACATGAGCCATA+TGG + chr6_4:14195420-14195439 None:intergenic 45.0%
! CCGGAGTACTTGGATAACAA+TGG - chr6_4:14195679-14195698 Msa0978330:intron 45.0%
TGTTTATGGAGCTGAGCAGA+AGG - chr6_4:14195899-14195918 Msa0978330:CDS 45.0%
! TAGCAGGTTGAAGTCAGCTT+TGG + chr6_4:14195966-14195985 None:intergenic 45.0%
!!! TATTTTTTAAAATTATTATC+GGG - chr6_4:14189044-14189063 Msa0978330:intron 5.0%
GGGGATTTGTGTGCTGTGTT+TGG + chr6_4:14188208-14188227 None:intergenic 50.0%
CGCCACCTCACAATACAAAG+AGG - chr6_4:14188257-14188276 Msa0978330:three_prime_UTR 50.0%
GTGAAAGGGAGTGATGCGAA+TGG - chr6_4:14188454-14188473 Msa0978330:CDS 50.0%
CGGCGTGTTAATGTTGTGTC+AGG - chr6_4:14188775-14188794 Msa0978330:intron 50.0%
!! ACCTGTTCAAGAGGCACTTG+TGG + chr6_4:14190214-14190233 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr6_4:14190498-14190517 Msa0978330:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr6_4:14190559-14190578 Msa0978330:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr6_4:14190579-14190598 Msa0978330:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr6_4:14190724-14190743 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr6_4:14190898-14190917 None:intergenic 50.0%
ACGCCTTATCCCACTAAGTG+GGG + chr6_4:14190902-14190921 None:intergenic 50.0%
CAACGCCTTATCCCACTAAG+TGG + chr6_4:14190904-14190923 None:intergenic 50.0%
! GTTCATTCAGCCAAGGCATC+CGG - chr6_4:14191255-14191274 Msa0978330:CDS 50.0%
AGAGTTGAAACCGGATGCCT+TGG + chr6_4:14191268-14191287 None:intergenic 50.0%
TGCCTGTAAGGAAGCTACTC+TGG - chr6_4:14191349-14191368 Msa0978330:intron 50.0%
ACCGGGAAGCTGAATTCACT+AGG - chr6_4:14191579-14191598 Msa0978330:intron 50.0%
GGGAAGCTGAATTCACTAGG+TGG - chr6_4:14191582-14191601 Msa0978330:intron 50.0%
CCGACTGAATTCTGCTTCAC+AGG + chr6_4:14191891-14191910 None:intergenic 50.0%
GTGAAGCAGAATTCAGTCGG+TGG - chr6_4:14191891-14191910 Msa0978330:CDS 50.0%
!! GCTTGTAGTGGATCTATCCG+GGG - chr6_4:14192173-14192192 Msa0978330:CDS 50.0%
TGGATCTATCTGGGGAACCT+GGG - chr6_4:14191871-14191890 Msa0978330:CDS 50.0%
CCTACTGAATTCTGCTTCCC+AGG + chr6_4:14192533-14192552 None:intergenic 50.0%
CCTGGGAAGCAGAATTCAGT+AGG - chr6_4:14192530-14192549 Msa0978330:CDS 50.0%
! CCGGAGGGAGTATATACTAC+AGG - chr6_4:14193059-14193078 Msa0978330:intron 50.0%
TTGTCATCTCAGTGCCAAGG+GGG + chr6_4:14193529-14193548 None:intergenic 50.0%
! TTGTGACTGGTTGCTGGTCA+TGG - chr6_4:14195513-14195532 Msa0978330:intron 50.0%
TGATGCAGTGAGAATCGAGC+CGG - chr6_4:14195660-14195679 Msa0978330:intron 50.0%
CAACATTAACACGCCGGCAC+CGG + chr6_4:14188771-14188790 None:intergenic 55.0%
TGGCAAGGCTTCCCAGTTCT+TGG + chr6_4:14190179-14190198 None:intergenic 55.0%
GCCACAAGTGCCTCTTGAAC+AGG - chr6_4:14190210-14190229 Msa0978330:CDS 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr6_4:14190485-14190504 Msa0978330:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr6_4:14190515-14190534 Msa0978330:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr6_4:14190571-14190590 Msa0978330:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr6_4:14190723-14190742 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr6_4:14190890-14190909 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr6_4:14190889-14190908 Msa0978330:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr6_4:14190890-14190909 Msa0978330:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr6_4:14190896-14190915 Msa0978330:CDS 55.0%
GTGGATCTATCTGGGGAACC+TGG - chr6_4:14191870-14191889 Msa0978330:CDS 55.0%
GGTGCCAAGTCCCAGACAAA+TGG - chr6_4:14193461-14193480 Msa0978330:intron 55.0%
ATCTCAGTGCCAAGGGGGAA+AGG + chr6_4:14193524-14193543 None:intergenic 55.0%
! GAGAATCGAGCCGGAGTACT+TGG - chr6_4:14195669-14195688 Msa0978330:intron 55.0%
TGGAGCTGAGCAGAAGGATG+AGG - chr6_4:14195905-14195924 Msa0978330:CDS 55.0%
GAGAAGACCCGTAGACGCCG+TGG - chr6_4:14190713-14190732 Msa0978330:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 14188195 14196241 14188195 ID=Msa0978330;Name=Msa0978330
chr6_4 mRNA 14188195 14196241 14188195 ID=Msa0978330-mRNA-1;Parent=Msa0978330;Name=Msa0978330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=214|0.73|0.81|1|0.8|0.81|16|255|731
chr6_4 exon 14188195 14188586 14188195 ID=Msa0978330-mRNA-1:exon:4668;Parent=Msa0978330-mRNA-1
chr6_4 exon 14188679 14188789 14188679 ID=Msa0978330-mRNA-1:exon:4667;Parent=Msa0978330-mRNA-1
chr6_4 exon 14189379 14189544 14189379 ID=Msa0978330-mRNA-1:exon:4666;Parent=Msa0978330-mRNA-1
chr6_4 exon 14189645 14189735 14189645 ID=Msa0978330-mRNA-1:exon:4665;Parent=Msa0978330-mRNA-1
chr6_4 exon 14189828 14190025 14189828 ID=Msa0978330-mRNA-1:exon:4664;Parent=Msa0978330-mRNA-1
chr6_4 exon 14190141 14190295 14190141 ID=Msa0978330-mRNA-1:exon:4663;Parent=Msa0978330-mRNA-1
chr6_4 exon 14190808 14191007 14190808 ID=Msa0978330-mRNA-1:exon:4662;Parent=Msa0978330-mRNA-1
chr6_4 exon 14191100 14191306 14191100 ID=Msa0978330-mRNA-1:exon:4661;Parent=Msa0978330-mRNA-1
chr6_4 exon 14191764 14191770 14191764 ID=Msa0978330-mRNA-1:exon:4660;Parent=Msa0978330-mRNA-1
chr6_4 exon 14191802 14191933 14191802 ID=Msa0978330-mRNA-1:exon:4659;Parent=Msa0978330-mRNA-1
chr6_4 exon 14192134 14192265 14192134 ID=Msa0978330-mRNA-1:exon:4658;Parent=Msa0978330-mRNA-1
chr6_4 exon 14192444 14192575 14192444 ID=Msa0978330-mRNA-1:exon:4657;Parent=Msa0978330-mRNA-1
chr6_4 exon 14192753 14192870 14192753 ID=Msa0978330-mRNA-1:exon:4656;Parent=Msa0978330-mRNA-1
chr6_4 exon 14193060 14193215 14193060 ID=Msa0978330-mRNA-1:exon:4655;Parent=Msa0978330-mRNA-1
chr6_4 exon 14194205 14194302 14194205 ID=Msa0978330-mRNA-1:exon:4654;Parent=Msa0978330-mRNA-1
chr6_4 exon 14195872 14196241 14195872 ID=Msa0978330-mRNA-1:exon:4653;Parent=Msa0978330-mRNA-1
chr6_4 five_prime_UTR 14196028 14196241 14196028 ID=Msa0978330-mRNA-1:five_prime_utr;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14195872 14196027 14195872 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14194205 14194302 14194205 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14193060 14193215 14193060 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14192753 14192870 14192753 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14192444 14192575 14192444 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14192134 14192265 14192134 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14191802 14191933 14191802 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14191764 14191770 14191764 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14191100 14191306 14191100 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14190808 14191007 14190808 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14190141 14190295 14190141 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14189828 14190025 14189828 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14189645 14189735 14189645 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14189379 14189544 14189379 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14188679 14188789 14188679 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 CDS 14188450 14188586 14188450 ID=Msa0978330-mRNA-1:cds;Parent=Msa0978330-mRNA-1
chr6_4 three_prime_UTR 14188195 14188449 14188195 ID=Msa0978330-mRNA-1:three_prime_utr;Parent=Msa0978330-mRNA-1
Gene Sequence

>Msa0978330

ATGGATACTAAAATGGAAATCGATTCAGCTTCACAAGAACTGAATGTGAAAGGGAGTGATGCGAATGGAAAGAAATTGAATCGGAACAATAAATGCGGTGTTCGTGTTATTGGGAATCGAATCTATGATTCTGCTAATGGCAAAACTTGTCATCAGTGCCGGCAAAAAACAAGGGACTTTTCTGCTGCTTGTAAGAATCCAAGAACTGGGAAGCCTTGCCAAATTAAGTTCTGCCACAAGTGCCTCTTGAACAGGAAAAAAAGAGGTGAACAACCTACTGGTATGCTAGTTCATTCAGCCAAGGCATCCGGTTTCAACTCTGTGTCAGCAATGCTTAGAAAGAAGGCTTCTGAAAGTTTGGAATCGAACAATGCTGTGGTTTTGCCTGTAAGGAAGCTACTCTGGAAAAGATCTATTTGGGAAACCGGGAAGCTGAATTCACTAGGTGGAAACAAAGGTTTAAAGGTTGAAAATGAGAAAACCAAGAAAGTGAATCGGAAAAAGTTAAAGGAACCTACTCTGGAAAAGGAGCTTGTAGTGGATCTATCTGGGGAACCTGTGAAGCAGAATTCAGTCGGTGGAAACATAGGTTTAAAGGTTATAAATGGGAAAACCAAGACAATGAAGCGGAAAAAGTTAAAGGAAGATACTCTGGAAAAGGAGCTTGTAGTGGATCTATCCGGGGAACCTATGAAGCAGAATTCAGTAGGTGAAGACATAGGTTTAAAGGTTGAAAATGAGAAAACCAAGACAATGAAGCGGAAAAAGTTAAAGGAAGCTACTCTTGGAAAGGAGCTTGTAGTGGATCTATCTGGGGAACCTGGGAAGCAGAATTCAGTAGGTGAAAACATAGGTTTAAAGGTTGGAAATGAGAAAACCAAGACAGTGAAGCAGAAAAAGTTAAAGGAAACTACTCTAGGAAAGTTGACACGTGGAGTTAGTGCTTCAAAGGTTGGACGTGAGAAAACCAAGAAAGTGAAGCGGGAAAACTTAAAGGAAATATCCAATGGCAACAGTGTTGATGATGCTTGCCAAAACAAGAAATCGAAAAAGCCTAAACTTTCTATTGTAGTTTCAGAGGGTGAAGTGAAACCAAAAGCAAATTCTGAAACGGGGACAAAAATAGGGGAGAATCATGGAACTGTTGTGATAGGAGATGGTGACAATGCTGGTGCCAAGTCCCAGACAAATGGTAAAATTTTGCATGAAGAAAAAATTAAGGAAGAAATTCCTTTCCCCCTTGGCACTGAGATGACAAAAATATTAGACATTGAGTTTGCACCAGAAGATGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGATTGTTTGGAAAGGCTCTTGATGTCAAGAAAGGAGAAGCAGTAGCTGTTCTAAGAGCATTGATACGTAAGCAAAATTTGCGACGTGGACAAAACACCTTAGTGGTTGAGTTCCAAATCAAACTGTTGACTTTGATAGTCTCTGATTCTGAATCTGATTCAGAAACCGAGTCTTCAGCCATAACTGCTAGCAATGGAAAAAACTCATGGTTGAAAGTTTTGGAAGATTTAATTACTGAATCTGATCTTGTACTAAGAGAATTTCCGTCGGATTGGCTTAATAAAGGCATAAGTGGATATTATGATTTGAACTTATCCAAAAAGCTTATCCTTCTGAATTTTATTTGTGATGAAGCCTTGGGCACGATGAAGCTAAGGAATTATATTGATGATCAAAATGCAAGATTTGTTGAAGAAAAGAAAGCAGCAAAGTCTAAGGTTTCTGAAGCTAAGGAAAAGGAAAGAAGTCTTAAGCAAAAGTTGCAGGATGAGATTGCAAAAGCTGTTGTATCAAATGGAGCTAGCCTCTCAATTTCAGAACACGATGCTCTTCTTGCAAAGATAAAAAGTGAAACAGCTAAAGCTCATACTGAGTTGATTGAGGCAAAAGGCACAATTCCTAAACGGAACCAACATTGTGATGCAGTGAGAATCGAGCCGGAGTACTTGGATAACAATGGTAAGGCATTCTGGAAACTAAGAAGCTGTAATGATGACTATGCCTACATGTTACAAGATATGAAGATCCATGATGAAGATGGTGTTGAAGTTGATGAAAAATGGTTTGTTTATGGAGCTGAGCAGAAGGATGAGGTTCATAAGTACATTTCATCTAGGAGAGATTGGTTACCAAAGCTGACTTCAACCTGCTAG

Protein sequence

>Msa0978330

MDTKMEIDSASQELNVKGSDANGKKLNRNNKCGVRVIGNRIYDSANGKTCHQCRQKTRDFSAACKNPRTGKPCQIKFCHKCLLNRKKRGEQPTGMLVHSAKASGFNSVSAMLRKKASESLESNNAVVLPVRKLLWKRSIWETGKLNSLGGNKGLKVENEKTKKVNRKKLKEPTLEKELVVDLSGEPVKQNSVGGNIGLKVINGKTKTMKRKKLKEDTLEKELVVDLSGEPMKQNSVGEDIGLKVENEKTKTMKRKKLKEATLGKELVVDLSGEPGKQNSVGENIGLKVGNEKTKTVKQKKLKETTLGKLTRGVSASKVGREKTKKVKRENLKEISNGNSVDDACQNKKSKKPKLSIVVSEGEVKPKANSETGTKIGENHGTVVIGDGDNAGAKSQTNGKILHEEKIKEEIPFPLGTEMTKILDIEFAPEDVGNALQFLEFCRLFGKALDVKKGEAVAVLRALIRKQNLRRGQNTLVVEFQIKLLTLIVSDSESDSETESSAITASNGKNSWLKVLEDLITESDLVLREFPSDWLNKGISGYYDLNLSKKLILLNFICDEALGTMKLRNYIDDQNARFVEEKKAAKSKVSEAKEKERSLKQKLQDEIAKAVVSNGASLSISEHDALLAKIKSETAKAHTELIEAKGTIPKRNQHCDAVRIEPEYLDNNGKAFWKLRSCNDDYAYMLQDMKIHDEDGVEVDEKWFVYGAEQKDEVHKYISSRRDWLPKLTSTC*