Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979480 | XP_039682774.1 | 91.319 | 910 | 65 | 2 | 1 | 910 | 1 | 896 | 0.0 | 1604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979480 | A0A396HD68 | 91.118 | 912 | 65 | 3 | 1 | 910 | 1 | 898 | 0.0 | 1598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740710 | Msa0979480 | 0.815942 | 7.138172e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979480 | MtrunA17_Chr6g0459211 | 91.118 | 912 | 65 | 3 | 1 | 910 | 1 | 898 | 0.0 | 1598 |
| Msa0979480 | MtrunA17_Chr7g0225961 | 65.017 | 586 | 188 | 9 | 331 | 910 | 407 | 981 | 0.0 | 758 |
| Msa0979480 | MtrunA17_Chr7g0225961 | 53.198 | 344 | 128 | 10 | 5 | 337 | 1 | 322 | 7.75e-94 | 318 |
| Msa0979480 | MtrunA17_Chr7g0258101 | 48.522 | 575 | 260 | 12 | 350 | 907 | 153 | 708 | 3.89e-170 | 511 |
| Msa0979480 | MtrunA17_Chr1g0187521 | 50.530 | 566 | 226 | 14 | 351 | 910 | 476 | 993 | 4.96e-168 | 515 |
| Msa0979480 | MtrunA17_Chr1g0187521 | 47.024 | 168 | 75 | 3 | 1 | 166 | 1 | 156 | 1.57e-41 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979480 | AT3G01810.1 | 48.954 | 956 | 404 | 20 | 1 | 909 | 1 | 919 | 0.0 | 828 |
| Msa0979480 | AT3G01810.3 | 48.954 | 956 | 404 | 20 | 1 | 909 | 1 | 919 | 0.0 | 828 |
| Msa0979480 | AT3G01810.2 | 48.954 | 956 | 404 | 20 | 1 | 909 | 1 | 919 | 0.0 | 828 |
| Msa0979480 | AT2G42320.2 | 47.015 | 536 | 237 | 10 | 380 | 908 | 174 | 669 | 3.49e-160 | 484 |
| Msa0979480 | AT2G42320.1 | 47.015 | 536 | 237 | 10 | 380 | 908 | 174 | 669 | 3.49e-160 | 484 |
| Msa0979480 | AT5G43230.1 | 45.053 | 566 | 250 | 10 | 351 | 907 | 329 | 842 | 1.41e-154 | 476 |
| Msa0979480 | AT3G57780.4 | 46.805 | 532 | 253 | 6 | 379 | 907 | 165 | 669 | 9.84e-153 | 466 |
| Msa0979480 | AT3G57780.1 | 46.805 | 532 | 253 | 6 | 379 | 907 | 165 | 669 | 9.84e-153 | 466 |
| Msa0979480 | AT3G57780.2 | 46.805 | 532 | 253 | 6 | 379 | 907 | 165 | 669 | 9.84e-153 | 466 |
| Msa0979480 | AT3G57780.3 | 46.805 | 532 | 253 | 6 | 379 | 907 | 165 | 669 | 9.84e-153 | 466 |
| Msa0979480 | AT5G06930.2 | 40.388 | 515 | 243 | 9 | 362 | 867 | 234 | 693 | 2.12e-118 | 377 |
| Msa0979480 | AT5G06930.3 | 40.388 | 515 | 243 | 9 | 362 | 867 | 234 | 693 | 2.12e-118 | 377 |
| Msa0979480 | AT5G06930.1 | 40.388 | 515 | 243 | 9 | 362 | 867 | 234 | 693 | 2.12e-118 | 377 |
| Msa0979480 | AT3G57780.5 | 47.837 | 393 | 183 | 3 | 379 | 771 | 165 | 535 | 2.59e-117 | 369 |
| Msa0979480 | AT2G42320.4 | 50.155 | 323 | 131 | 6 | 380 | 695 | 174 | 473 | 1.97e-103 | 330 |
| Msa0979480 | AT2G42320.3 | 50.155 | 323 | 131 | 6 | 380 | 695 | 174 | 473 | 1.97e-103 | 330 |
Find 173 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCACTTGGTTCGGTTAT+AGG | 0.109266 | 6_4:-16733025 | Msa0979480:CDS |
| GTAACATGTCACTAAATATT+TGG | 0.162383 | 6_4:-16730650 | Msa0979480:CDS |
| ATGTAATCACCTTTGATATA+TGG | 0.171084 | 6_4:-16728492 | Msa0979480:three_prime_UTR |
| TAATCTCTTGAATATGAATT+AGG | 0.221435 | 6_4:+16733146 | None:intergenic |
| CGGATTAGTACTTGTTTCTA+AGG | 0.227902 | 6_4:-16731735 | Msa0979480:CDS |
| TGTGTTTCAAAAGAATTTCT+TGG | 0.228255 | 6_4:-16732918 | Msa0979480:CDS |
| GATTGTTAAGGGTCAATTAT+TGG | 0.228868 | 6_4:-16732861 | Msa0979480:CDS |
| TCGTGTTAGATCTTCGTTAA+AGG | 0.237681 | 6_4:-16732699 | Msa0979480:CDS |
| TATCATTCAAATTAGTCTTT+TGG | 0.248270 | 6_4:+16732353 | None:intergenic |
| ACAATCTTATTATCTCTTCT+TGG | 0.252599 | 6_4:+16732878 | None:intergenic |
| CCAGAACATGACTGCGATTA+AGG | 0.271741 | 6_4:-16733355 | Msa0979480:five_prime_UTR |
| ATATAGAATGATATGCAAAA+TGG | 0.273516 | 6_4:-16728902 | Msa0979480:intron |
| ATGAGTACCTTGTCCGATTT+AGG | 0.279312 | 6_4:+16732497 | None:intergenic |
| CTGGTGAGGATTCATCATTT+TGG | 0.292337 | 6_4:-16733230 | Msa0979480:five_prime_UTR |
| TGTTGTATTTAACTTGTTAC+TGG | 0.296372 | 6_4:-16733638 | Msa0979480:five_prime_UTR |
| GCACTTAAAAGCAGATCTTT+AGG | 0.299684 | 6_4:+16729311 | None:intergenic |
| ACATGGAAATTCCATGAATA+AGG | 0.305554 | 6_4:-16731855 | Msa0979480:CDS |
| TTAGCATTTCTTGCTTCCTT+TGG | 0.318363 | 6_4:+16731983 | None:intergenic |
| GCAGCGAAAAGTTCTGTTTC+CGG | 0.327962 | 6_4:-16731755 | Msa0979480:CDS |
| TACAACTGTTCTTGAAGCTT+TGG | 0.328398 | 6_4:-16729049 | Msa0979480:CDS |
| ATTGTTAAGGGTCAATTATT+GGG | 0.330425 | 6_4:-16732860 | Msa0979480:CDS |
| TGTAATCACCTTTGATATAT+GGG | 0.331804 | 6_4:-16728491 | Msa0979480:three_prime_UTR |
| CTCGAATAGTCGAATCTATA+TGG | 0.332048 | 6_4:-16731157 | Msa0979480:CDS |
| GTGGCTGCAGGTTAACCTTT+TGG | 0.339895 | 6_4:-16731427 | Msa0979480:intron |
| ATGATCTCCTTAGGGATGTT+TGG | 0.346434 | 6_4:-16728598 | Msa0979480:CDS |
| GCAGCAAATCTTCTGTTGTT+AGG | 0.350605 | 6_4:-16728763 | Msa0979480:CDS |
| GGGAAGTGCTGTTGTAGATT+TGG | 0.358394 | 6_4:-16732840 | Msa0979480:CDS |
| GTTGTAGATTTGGCTGATTA+TGG | 0.358449 | 6_4:-16732830 | Msa0979480:CDS |
| TCTTGAAGCTTTGGATTTAG+AGG | 0.361343 | 6_4:-16729040 | Msa0979480:intron |
| CCTTAATCGCAGTCATGTTC+TGG | 0.363502 | 6_4:+16733355 | None:intergenic |
| TGGGATATGAATGTGGTAAC+TGG | 0.369434 | 6_4:-16731235 | Msa0979480:CDS |
| AAAACTTCGATTCTTTCATC+TGG | 0.372229 | 6_4:-16733249 | Msa0979480:five_prime_UTR |
| TTGGCATACCTCATTCCTAA+TGG | 0.374451 | 6_4:+16729286 | None:intergenic |
| CCTCAAGGAAAAGCTATAGA+AGG | 0.375691 | 6_4:-16730701 | Msa0979480:CDS |
| AAGCAATGATTATGAAAATT+CGG | 0.377763 | 6_4:-16732131 | Msa0979480:CDS |
| TTTACCTATGCTTCCTAGAC+TGG | 0.380910 | 6_4:-16730559 | Msa0979480:intron |
| GAATTTCAGCGACATTGTTA+AGG | 0.386858 | 6_4:-16732970 | Msa0979480:CDS |
| AGAGATAATAAGATTGTTAA+GGG | 0.389361 | 6_4:-16732872 | Msa0979480:CDS |
| ACAGTTGTAGGAACTGGATC+AGG | 0.389756 | 6_4:+16729063 | None:intergenic |
| GCAAGCATTCTCGGAGAGAT+TGG | 0.390783 | 6_4:-16728806 | Msa0979480:CDS |
| CTGTTAGATATGATCTCCTT+AGG | 0.395032 | 6_4:-16728607 | Msa0979480:CDS |
| AAGAGATAATAAGATTGTTA+AGG | 0.395211 | 6_4:-16732873 | Msa0979480:CDS |
| TTAAGGGATGTATCGATTAG+AGG | 0.395893 | 6_4:-16732953 | Msa0979480:CDS |
| AGAAGGTAAAATTGATTACT+TGG | 0.396655 | 6_4:-16731957 | Msa0979480:CDS |
| TGATCCTCATGTGTTCATTT+CGG | 0.399241 | 6_4:-16731210 | Msa0979480:CDS |
| TCATGTGTTCATTTCGGCAT+TGG | 0.400416 | 6_4:-16731204 | Msa0979480:CDS |
| CTAAGGAGATCATATCTAAC+AGG | 0.403983 | 6_4:+16728608 | None:intergenic |
| ACTTCCGTCGCAAGCATTCT+CGG | 0.404276 | 6_4:-16728815 | Msa0979480:CDS |
| GATCTTTAGGAAGCATTAAG+AGG | 0.407871 | 6_4:+16729324 | None:intergenic |
| AGTCTCTCCTTCACTTGGTT+CGG | 0.411013 | 6_4:-16733032 | Msa0979480:CDS |
| GGCAGAAGCAACTTCCTTGT+TGG | 0.413536 | 6_4:+16730722 | None:intergenic |
| GCAAGAAATGCTAATTTAGA+AGG | 0.418811 | 6_4:-16731974 | Msa0979480:CDS |
| AATTTCAGCGACATTGTTAA+GGG | 0.422713 | 6_4:-16732969 | Msa0979480:CDS |
| TCACTAATAGGATCAGATAT+TGG | 0.425304 | 6_4:+16730282 | None:intergenic |
| AATGATCAAGGAAGAAGGTT+TGG | 0.425346 | 6_4:-16731779 | Msa0979480:CDS |
| TCAAGAACAGTTGTAGGAAC+TGG | 0.426738 | 6_4:+16729057 | None:intergenic |
| ATGCAAAATGGGAATGAGTT+TGG | 0.427765 | 6_4:-16728890 | Msa0979480:CDS |
| AAAGACTAATTTGAATGATA+AGG | 0.429826 | 6_4:-16732350 | Msa0979480:CDS |
| AATGCTATTCTGCGCGAGTT+CGG | 0.430241 | 6_4:-16730324 | Msa0979480:CDS |
| TAATTTCAGATTGATCGAAA+TGG | 0.431417 | 6_4:-16732382 | Msa0979480:intron |
| ATGCTTGCGACGGAAGTTAC+CGG | 0.434494 | 6_4:+16728821 | None:intergenic |
| AAAGCTTCAAGAACAGTTGT+AGG | 0.437146 | 6_4:+16729051 | None:intergenic |
| GTGTGTACAAAAGGGTATCT+AGG | 0.440987 | 6_4:+16733572 | None:intergenic |
| TTCATTGTCAGATTGGGAAC+TGG | 0.441626 | 6_4:-16729478 | Msa0979480:intron |
| TCTTCAACTATATTTCTAGA+AGG | 0.443543 | 6_4:+16732082 | None:intergenic |
| TATAGAATGATATGCAAAAT+GGG | 0.447699 | 6_4:-16728901 | Msa0979480:intron |
| AGAACCTTAGGATCACTAAT+AGG | 0.447952 | 6_4:+16730270 | None:intergenic |
| CTTAGAAACAAGTACTAATC+CGG | 0.453091 | 6_4:+16731736 | None:intergenic |
| GGATCAGATATTGGATCAGT+TGG | 0.459197 | 6_4:+16730291 | None:intergenic |
| GTTCATTTCGGCATTGGAAA+AGG | 0.460158 | 6_4:-16731198 | Msa0979480:CDS |
| AGTTCATGTGATCAAGATCT+TGG | 0.460603 | 6_4:-16730672 | Msa0979480:CDS |
| TCATTAATACACAAATTCAT+AGG | 0.464703 | 6_4:+16733456 | None:intergenic |
| GCTGAACAGTTCATCGTCAA+TGG | 0.474674 | 6_4:-16732260 | Msa0979480:CDS |
| TATTCAGTTGTTGCTGAACA+TGG | 0.474705 | 6_4:-16731872 | Msa0979480:CDS |
| AAGCCGAAACTCAAAAGATC+TGG | 0.478939 | 6_4:-16731372 | Msa0979480:CDS |
| AAGTGCATCCATTAGGAATG+AGG | 0.480541 | 6_4:-16729294 | Msa0979480:intron |
| GGATCAGGGCAAAACTCATC+AGG | 0.481074 | 6_4:+16729078 | None:intergenic |
| CATGAATAAGGTTCACGCTC+CGG | 0.481588 | 6_4:-16731843 | Msa0979480:CDS |
| TCATGCCCTACAGCTCTAAT+CGG | 0.481827 | 6_4:+16730591 | None:intergenic |
| AACATCATCATCAGTAAAAG+AGG | 0.484118 | 6_4:+16732580 | None:intergenic |
| TCTACTTCATTTGAGTCTAG+TGG | 0.484445 | 6_4:-16732530 | Msa0979480:CDS |
| GAGAAAATGATCAAGGAAGA+AGG | 0.486434 | 6_4:-16731784 | Msa0979480:CDS |
| AGATTGGGAACTGGTCTAGA+TGG | 0.487242 | 6_4:-16729469 | Msa0979480:CDS |
| CTTATAAGACTGACCAGTCT+AGG | 0.488869 | 6_4:+16730546 | None:intergenic |
| AAATGAAAGTACAGCAACAT+TGG | 0.490362 | 6_4:-16731255 | Msa0979480:CDS |
| AATGAAAGTACAGCAACATT+GGG | 0.498532 | 6_4:-16731254 | Msa0979480:CDS |
| AATTGATTACTTGGACAAGA+AGG | 0.504452 | 6_4:-16731948 | Msa0979480:CDS |
| CGGAGCGTGAACCTTATTCA+TGG | 0.504992 | 6_4:+16731844 | None:intergenic |
| GTATCAATATGTTGCATATG+TGG | 0.506028 | 6_4:+16730753 | None:intergenic |
| AACTTGTTACTGGATTCCTA+TGG | 0.508856 | 6_4:-16733628 | Msa0979480:five_prime_UTR |
| GATTATGGAGTAATTAAAGA+AGG | 0.508984 | 6_4:-16732815 | Msa0979480:CDS |
| TTCGATTCTTTCATCTGGTG+AGG | 0.511853 | 6_4:-16733244 | Msa0979480:five_prime_UTR |
| CGGCGATTCCTCGTCCTCGA+GGG | 0.511929 | 6_4:-16728678 | Msa0979480:CDS |
| GGTGGAATAGGGAGAACCTT+AGG | 0.512189 | 6_4:+16730258 | None:intergenic |
| TGCGATTGTCTGTAATATCA+AGG | 0.514084 | 6_4:-16733311 | Msa0979480:five_prime_UTR |
| TGTTAGATATGATCTCCTTA+GGG | 0.515665 | 6_4:-16728606 | Msa0979480:CDS |
| ACAATTGCAGCTGCAGTGCA+TGG | 0.516794 | 6_4:+16728857 | None:intergenic |
| CATTGGAAAAGGTTGAAGCT+TGG | 0.517778 | 6_4:-16731187 | Msa0979480:CDS |
| TTAGATCTTCGTTAAAGGAA+AGG | 0.519736 | 6_4:-16732694 | Msa0979480:CDS |
| CTTGGTTCGGTTATAGGTGA+AGG | 0.520671 | 6_4:-16733019 | Msa0979480:CDS |
| TGTTGAAACCCTCGAGGACG+AGG | 0.523064 | 6_4:+16728670 | None:intergenic |
| TGATCCTATTAGTGATCCTA+AGG | 0.524062 | 6_4:-16730274 | Msa0979480:CDS |
| GATCAGATATTGGATCAGTT+GGG | 0.524958 | 6_4:+16730292 | None:intergenic |
| AAAGATTGCGATGGAGGCCA+AGG | 0.535952 | 6_4:+16733121 | None:intergenic |
| AGAGGCAATCTCAGCTTCCT+CGG | 0.538593 | 6_4:+16732598 | None:intergenic |
| TTTGAGGAGAATAGTAATGG+TGG | 0.542243 | 6_4:-16732656 | Msa0979480:CDS |
| ATATGTCCGATTAGAGCTGT+AGG | 0.545708 | 6_4:-16730597 | Msa0979480:CDS |
| AGTCGAATCTATATGGTGGC+AGG | 0.546281 | 6_4:-16731150 | Msa0979480:intron |
| GCGACGGAAGTTACCGGTGG+AGG | 0.549032 | 6_4:+16728827 | None:intergenic |
| GTACTTGTTTCTAAGGCATG+TGG | 0.549534 | 6_4:-16731728 | Msa0979480:CDS |
| TGATACAAACTTGGCCAACA+AGG | 0.551359 | 6_4:-16730736 | Msa0979480:CDS |
| GCAACATATTGATACAAACT+TGG | 0.555471 | 6_4:-16730745 | Msa0979480:CDS |
| AGGAAGTTGCTTCTGCCTCA+AGG | 0.558528 | 6_4:-16730716 | Msa0979480:CDS |
| AAATTGATAATGTGGACCAT+AGG | 0.560719 | 6_4:+16733612 | None:intergenic |
| CAATTGCAGCTGCAGTGCAT+GGG | 0.562654 | 6_4:+16728858 | None:intergenic |
| TATAGTATTAGACAACCAAA+AGG | 0.564130 | 6_4:+16731412 | None:intergenic |
| GCTTGTAGAGAAAATGATCA+AGG | 0.564789 | 6_4:-16731791 | Msa0979480:CDS |
| GATCTTAAAGATTGCGATGG+AGG | 0.564846 | 6_4:+16733115 | None:intergenic |
| ATAAGGTTCACGCTCCGGCT+CGG | 0.565445 | 6_4:-16731838 | Msa0979480:CDS |
| GTTCGGTTATAGGTGAAGGA+AGG | 0.570688 | 6_4:-16733015 | Msa0979480:CDS |
| GCATCATCACAAAGGTGGAA+AGG | 0.571223 | 6_4:-16731284 | Msa0979480:CDS |
| GATAAGTGATGCACTAAACA+TGG | 0.573253 | 6_4:+16729125 | None:intergenic |
| AGATGCTAAGATTAATCCAA+AGG | 0.573884 | 6_4:-16731999 | Msa0979480:CDS |
| ATATTCAAGAGATTAAGCCT+TGG | 0.574588 | 6_4:-16733138 | Msa0979480:CDS |
| GGCGAACAAGATTCAAAACC+CGG | 0.577322 | 6_4:+16732202 | None:intergenic |
| AATTGTCTATTCACCTCCAC+CGG | 0.579796 | 6_4:-16728840 | Msa0979480:CDS |
| GTACATCTTTGAACTGCAAG+AGG | 0.580715 | 6_4:-16732781 | Msa0979480:CDS |
| TAGTGTATTAAGAAGTGAGA+AGG | 0.581069 | 6_4:+16729352 | None:intergenic |
| AAACTAGTCTCTCCTTCACT+TGG | 0.585044 | 6_4:-16733037 | Msa0979480:CDS |
| TCACAAAACCCATATATCAA+AGG | 0.587995 | 6_4:+16728483 | None:intergenic |
| AAGGTTCTCCCTATTCCACC+TGG | 0.588369 | 6_4:-16730255 | Msa0979480:CDS |
| CTCAAGGAAAAGCTATAGAA+GGG | 0.589527 | 6_4:-16730700 | Msa0979480:CDS |
| AGTACCTTGTCCGATTTAGG+AGG | 0.591608 | 6_4:+16732500 | None:intergenic |
| CTGACCAGTCTAGGAAGCAT+AGG | 0.592746 | 6_4:+16730555 | None:intergenic |
| AGATAGCATCATCACAAAGG+TGG | 0.594456 | 6_4:-16731289 | Msa0979480:CDS |
| TCGCAGTCATGTTCTGGTCA+CGG | 0.597511 | 6_4:+16733361 | None:intergenic |
| ATAAGTGATGCACTAAACAT+GGG | 0.604761 | 6_4:+16729126 | None:intergenic |
| CTCTCCGAGAATGCTTGCGA+CGG | 0.607377 | 6_4:+16728811 | None:intergenic |
| CATGTGGAAACGATGTTCCA+AGG | 0.608029 | 6_4:-16731712 | Msa0979480:intron |
| TATTCATCCAAACATCCCTA+AGG | 0.609353 | 6_4:+16728591 | None:intergenic |
| CATGAAGATAAAGCCTCGAA+AGG | 0.612415 | 6_4:+16731813 | None:intergenic |
| TCGGCGATTCCTCGTCCTCG+AGG | 0.612824 | 6_4:-16728679 | Msa0979480:CDS |
| AGAGATCTTAAAGATTGCGA+TGG | 0.618733 | 6_4:+16733112 | None:intergenic |
| CAGTTGTAGGAACTGGATCA+GGG | 0.622902 | 6_4:+16729064 | None:intergenic |
| GATCTGGTTTCATCAAGTCA+TGG | 0.623159 | 6_4:-16731356 | Msa0979480:CDS |
| TATGTCCGATTAGAGCTGTA+GGG | 0.624773 | 6_4:-16730596 | Msa0979480:CDS |
| TGATCTATGTGGCATGAATG+AGG | 0.625079 | 6_4:-16729441 | Msa0979480:CDS |
| TTAGCTTCAGAAACAAAGCT+CGG | 0.628472 | 6_4:-16732319 | Msa0979480:CDS |
| TGCTGCAACAGAAGAATGCG+AGG | 0.630443 | 6_4:+16732556 | None:intergenic |
| GTCTGTAATATCAAGGATCG+AGG | 0.630663 | 6_4:-16733304 | Msa0979480:five_prime_UTR |
| CAGTTAAAATGCAGTTGATG+CGG | 0.633167 | 6_4:+16733332 | None:intergenic |
| GATGAATGAAGAATATGCCG+AGG | 0.634854 | 6_4:-16732615 | Msa0979480:CDS |
| GGGATATGAATGTGGTAACT+GGG | 0.641198 | 6_4:-16731234 | Msa0979480:CDS |
| AGGGATGTATCGATTAGAGG+TGG | 0.642491 | 6_4:-16732950 | Msa0979480:CDS |
| CTAGGTAATGGAGCAATGTG+TGG | 0.652268 | 6_4:-16730370 | Msa0979480:intron |
| TACACCTCCTAAATCGGACA+AGG | 0.654049 | 6_4:-16732504 | Msa0979480:intron |
| CCTATAACCGAACCAAGTGA+AGG | 0.654391 | 6_4:+16733025 | None:intergenic |
| GCAACATTGGGATATGAATG+TGG | 0.658388 | 6_4:-16731242 | Msa0979480:CDS |
| CTAAGATAGCATCATCACAA+AGG | 0.659662 | 6_4:-16731292 | Msa0979480:CDS |
| AACAACTGTGACAGTTACCA+CGG | 0.665659 | 6_4:-16733281 | Msa0979480:five_prime_UTR |
| TGGTGCTAAGCTTAAAACTG+TGG | 0.677600 | 6_4:-16730214 | Msa0979480:intron |
| CTGGTTTCATCAAGTCATGG+TGG | 0.677853 | 6_4:-16731353 | Msa0979480:CDS |
| AAGAAGGTAAAGATGCTCGA+AGG | 0.679389 | 6_4:-16731932 | Msa0979480:CDS |
| AATGCCGAAATGAACACATG+AGG | 0.685575 | 6_4:+16731206 | None:intergenic |
| CTTGCGACGGAAGTTACCGG+TGG | 0.687946 | 6_4:+16728824 | None:intergenic |
| GAATAGTCGAATCTATATGG+TGG | 0.691154 | 6_4:-16731154 | Msa0979480:CDS |
| ATGTGTGGCAAGATTAGATG+TGG | 0.698570 | 6_4:-16730355 | Msa0979480:CDS |
| CATTGATGTCATGTGCTGTG+AGG | 0.705488 | 6_4:-16733395 | Msa0979480:five_prime_UTR |
| TAAGTGATGCACTAAACATG+GGG | 0.711310 | 6_4:+16729127 | None:intergenic |
| AGAGCTGTAGGGCATGAGTG+TGG | 0.721843 | 6_4:-16730585 | Msa0979480:CDS |
| AGATGGTTGAGTGATCTATG+TGG | 0.731561 | 6_4:-16729452 | Msa0979480:CDS |
| CAGTCATGTTCTGGTCACGG+AGG | 0.743852 | 6_4:+16733364 | None:intergenic |
| TCTATGTGGCATGAATGAGG+AGG | 0.761322 | 6_4:-16729438 | Msa0979480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATTTTAAATATATTT+TGG | + | chr6_4:16731413-16731432 | None:intergenic | 0.0% |
| !!! | AATTAATTTTTTTTCTTTTC+TGG | - | chr6_4:16730238-16730257 | Msa0979480:CDS | 10.0% |
| !!! | TTATATTTTCATATTCTTAA+GGG | - | chr6_4:16732259-16732278 | Msa0979480:CDS | 10.0% |
| !!! | TGATTTTTGTTTATGTTTTT+TGG | - | chr6_4:16728354-16728373 | Msa0979480:intron | 15.0% |
| !! | AAAATTTAGACAAAAATTCA+AGG | - | chr6_4:16729734-16729753 | Msa0979480:intron | 15.0% |
| !! | ATTAATTACAAGAAGAAATA+TGG | + | chr6_4:16730225-16730244 | None:intergenic | 15.0% |
| !! | TATATCATAAGGTATAAATA+TGG | + | chr6_4:16731740-16731759 | None:intergenic | 15.0% |
| !!! | CTTATATTTTCATATTCTTA+AGG | - | chr6_4:16732258-16732277 | Msa0979480:CDS | 15.0% |
| !! | AAATGACAAAGATAAAAATA+AGG | - | chr6_4:16732500-16732519 | Msa0979480:intron | 15.0% |
| !!! | CCATTATCTTTAATATTTTT+CGG | - | chr6_4:16733201-16733220 | Msa0979480:CDS | 15.0% |
| !!! | TTTTGTGACTATATATAATA+TGG | - | chr6_4:16733431-16733450 | Msa0979480:five_prime_UTR | 15.0% |
| !! | TTTGTGACTATATATAATAT+GGG | - | chr6_4:16733432-16733451 | Msa0979480:five_prime_UTR | 15.0% |
| !! | CAATATATAATTTCTACATT+TGG | + | chr6_4:16733496-16733515 | None:intergenic | 15.0% |
| !! | CAAATGTAGAAATTATATAT+TGG | - | chr6_4:16733494-16733513 | Msa0979480:five_prime_UTR | 15.0% |
| !!! | TAAGAGAATATTTCTTTTTT+TGG | - | chr6_4:16733572-16733591 | Msa0979480:five_prime_UTR | 15.0% |
| !!! | CAAGAAAAAAATTGATAATG+TGG | + | chr6_4:16728298-16728317 | None:intergenic | 20.0% |
| !!! | CACATTATCAATTTTTTTCT+TGG | - | chr6_4:16728296-16728315 | Msa0979480:intron | 20.0% |
| !! | TCATTAATACACAAATTCAT+AGG | + | chr6_4:16728446-16728465 | None:intergenic | 20.0% |
| !! | TAATCTCTTGAATATGAATT+AGG | + | chr6_4:16728756-16728775 | None:intergenic | 20.0% |
| !! | AAGAGATAATAAGATTGTTA+AGG | - | chr6_4:16729026-16729045 | Msa0979480:intron | 20.0% |
| !! | AGAGATAATAAGATTGTTAA+GGG | - | chr6_4:16729027-16729046 | Msa0979480:intron | 20.0% |
| !!! | TATCATTCAAATTAGTCTTT+TGG | + | chr6_4:16729549-16729568 | None:intergenic | 20.0% |
| !! | AAAGACTAATTTGAATGATA+AGG | - | chr6_4:16729549-16729568 | Msa0979480:intron | 20.0% |
| !! | AAGCAATGATTATGAAAATT+CGG | - | chr6_4:16729768-16729787 | Msa0979480:intron | 20.0% |
| !! | TCAAAACAAATTACATTGTT+TGG | - | chr6_4:16730828-16730847 | Msa0979480:intron | 20.0% |
| !!! | GTAGAAGTTATTTCTATATA+AGG | - | chr6_4:16730901-16730920 | Msa0979480:intron | 20.0% |
| !!! | TTTTTCTTCTACTTAAATCT+AGG | - | chr6_4:16731511-16731530 | Msa0979480:intron | 20.0% |
| !! | ACATGAAGAAATATATCATA+AGG | + | chr6_4:16731751-16731770 | None:intergenic | 20.0% |
| !! | AAAATGAAATGTTGAATTAG+AGG | - | chr6_4:16731797-16731816 | Msa0979480:CDS | 20.0% |
| !! | GACAAATTTAACAAAACATT+AGG | - | chr6_4:16732230-16732249 | Msa0979480:CDS | 20.0% |
| !! | GATAAGTTAAACAATATCTT+TGG | + | chr6_4:16732635-16732654 | None:intergenic | 20.0% |
| !! | ATATAGAATGATATGCAAAA+TGG | - | chr6_4:16732997-16733016 | Msa0979480:CDS | 20.0% |
| !! | TATAGAATGATATGCAAAAT+GGG | - | chr6_4:16732998-16733017 | Msa0979480:CDS | 20.0% |
| !! | CCGAAAAATATTAAAGATAA+TGG | + | chr6_4:16733204-16733223 | None:intergenic | 20.0% |
| !!! | TGTTGTATTTAACTTGTTAC+TGG | - | chr6_4:16728261-16728280 | Msa0979480:three_prime_UTR | 25.0% |
| !! | ATCAAAAAGTGTGTACAAAA+GGG | + | chr6_4:16728338-16728357 | None:intergenic | 25.0% |
| !! | AATCAAAAAGTGTGTACAAA+AGG | + | chr6_4:16728339-16728358 | None:intergenic | 25.0% |
| !!! | ATTCATCATTTTGGAAAACA+TGG | - | chr6_4:16728678-16728697 | Msa0979480:CDS | 25.0% |
| !!! | ATTTTGGAAAACATGGTTTT+AGG | - | chr6_4:16728685-16728704 | Msa0979480:CDS | 25.0% |
| !!! | ATCTCTTCATTCTGTTTTAA+TGG | - | chr6_4:16728804-16728823 | Msa0979480:CDS | 25.0% |
| !!! | GTTTTAATGGAATTGAAGAA+TGG | - | chr6_4:16728817-16728836 | Msa0979480:CDS | 25.0% |
| ! | TGTGTTTCAAAAGAATTTCT+TGG | - | chr6_4:16728981-16729000 | Msa0979480:intron | 25.0% |
| ! | ACAATCTTATTATCTCTTCT+TGG | + | chr6_4:16729024-16729043 | None:intergenic | 25.0% |
| ! | ATTGTTAAGGGTCAATTATT+GGG | - | chr6_4:16729039-16729058 | Msa0979480:intron | 25.0% |
| ! | GATTATGGAGTAATTAAAGA+AGG | - | chr6_4:16729084-16729103 | Msa0979480:CDS | 25.0% |
| !! | CATTCACAAAAGATTTTGAA+CGG | + | chr6_4:16729460-16729479 | None:intergenic | 25.0% |
| ! | TAATTTCAGATTGATCGAAA+TGG | - | chr6_4:16729517-16729536 | Msa0979480:intron | 25.0% |
| !! | AAATTTTCACAAACTGAAGA+TGG | + | chr6_4:16729721-16729740 | None:intergenic | 25.0% |
| !!! | TCTTCAACTATATTTCTAGA+AGG | + | chr6_4:16729820-16729839 | None:intergenic | 25.0% |
| ! | AGAAGGTAAAATTGATTACT+TGG | - | chr6_4:16729942-16729961 | Msa0979480:intron | 25.0% |
| ! | TATAGTATTAGACAACCAAA+AGG | + | chr6_4:16730490-16730509 | None:intergenic | 25.0% |
| ! | AATAGAAGAAGAAAAACTGA+GGG | - | chr6_4:16730573-16730592 | Msa0979480:CDS | 25.0% |
| ! | TAATGTCTTACTCTTATACA+GGG | - | chr6_4:16730772-16730791 | Msa0979480:intron | 25.0% |
| !!! | CAATGTAATTTGTTTTGAGT+TGG | + | chr6_4:16730826-16730845 | None:intergenic | 25.0% |
| !! | ATTGTTTGGATAAAGTGTTT+AGG | - | chr6_4:16730842-16730861 | Msa0979480:intron | 25.0% |
| ! | ATAAGAGCTTATCATATAAG+TGG | - | chr6_4:16730874-16730893 | Msa0979480:intron | 25.0% |
| ! | TATAAGAATACTCTCAAAGA+GGG | + | chr6_4:16731094-16731113 | None:intergenic | 25.0% |
| ! | GTAACATGTCACTAAATATT+TGG | - | chr6_4:16731249-16731268 | Msa0979480:CDS | 25.0% |
| ! | AAGTTCATTACTTTAGTCAA+TGG | - | chr6_4:16731450-16731469 | Msa0979480:intron | 25.0% |
| ! | TTCTACTTAAATCTAGGTAA+TGG | - | chr6_4:16731517-16731536 | Msa0979480:intron | 25.0% |
| ! | AAACCAATTATACCTTAAGA+AGG | - | chr6_4:16732056-16732075 | Msa0979480:CDS | 25.0% |
| ! | ATATGACAATGTATAATGGT+AGG | - | chr6_4:16732198-16732217 | Msa0979480:CDS | 25.0% |
| ! | TATGACAATGTATAATGGTA+GGG | - | chr6_4:16732199-16732218 | Msa0979480:CDS | 25.0% |
| ! | TACTTGAAAGACTAAATTGA+TGG | - | chr6_4:16732301-16732320 | Msa0979480:CDS | 25.0% |
| !! | AATTGATGGTTTAATCTTAG+AGG | - | chr6_4:16732315-16732334 | Msa0979480:CDS | 25.0% |
| !! | ATTGATGGTTTAATCTTAGA+GGG | - | chr6_4:16732316-16732335 | Msa0979480:CDS | 25.0% |
| ! | AAAAGGATTCTTTATTGTGA+AGG | - | chr6_4:16732745-16732764 | Msa0979480:CDS | 25.0% |
| ! | ATGTAATCACCTTTGATATA+TGG | - | chr6_4:16733407-16733426 | Msa0979480:five_prime_UTR | 25.0% |
| ! | TGTAATCACCTTTGATATAT+GGG | - | chr6_4:16733408-16733427 | Msa0979480:five_prime_UTR | 25.0% |
| !! | AAATTGATAATGTGGACCAT+AGG | + | chr6_4:16728290-16728309 | None:intergenic | 30.0% |
| !!! | AGAATCGAAGTTTTGAATTG+TGG | + | chr6_4:16728644-16728663 | None:intergenic | 30.0% |
| AAAACTTCGATTCTTTCATC+TGG | - | chr6_4:16728650-16728669 | Msa0979480:CDS | 30.0% | |
| ATATTCAAGAGATTAAGCCT+TGG | - | chr6_4:16728761-16728780 | Msa0979480:CDS | 30.0% | |
| AATTTCAGCGACATTGTTAA+GGG | - | chr6_4:16728930-16728949 | Msa0979480:intron | 30.0% | |
| GATTGTTAAGGGTCAATTAT+TGG | - | chr6_4:16729038-16729057 | Msa0979480:intron | 30.0% | |
| TTAGATCTTCGTTAAAGGAA+AGG | - | chr6_4:16729205-16729224 | Msa0979480:intron | 30.0% | |
| !! | GTTTTTGAGGAGAATAGTAA+TGG | - | chr6_4:16729240-16729259 | Msa0979480:intron | 30.0% |
| AACATCATCATCAGTAAAAG+AGG | + | chr6_4:16729322-16729341 | None:intergenic | 30.0% | |
| ! | TGAAAAAAATGCTACTTCAC+CGG | - | chr6_4:16729678-16729697 | Msa0979480:intron | 30.0% |
| ! | GGAAGAAAATTTTCATGACA+AGG | - | chr6_4:16729789-16729808 | Msa0979480:intron | 30.0% |
| AGATGCTAAGATTAATCCAA+AGG | - | chr6_4:16729900-16729919 | Msa0979480:intron | 30.0% | |
| GCAAGAAATGCTAATTTAGA+AGG | - | chr6_4:16729925-16729944 | Msa0979480:intron | 30.0% | |
| AATTGATTACTTGGACAAGA+AGG | - | chr6_4:16729951-16729970 | Msa0979480:intron | 30.0% | |
| ACATGGAAATTCCATGAATA+AGG | - | chr6_4:16730044-16730063 | Msa0979480:intron | 30.0% | |
| CTTAGAAACAAGTACTAATC+CGG | + | chr6_4:16730166-16730185 | None:intergenic | 30.0% | |
| TTTGAAGATATCCATTAGCA+TGG | - | chr6_4:16730282-16730301 | Msa0979480:CDS | 30.0% | |
| ! | GATATTGATAACCATGCTAA+TGG | + | chr6_4:16730296-16730315 | None:intergenic | 30.0% |
| ATATTGAATCGAATCAAGGT+AGG | + | chr6_4:16730335-16730354 | None:intergenic | 30.0% | |
| TTCGATATTGAATCGAATCA+AGG | + | chr6_4:16730339-16730358 | None:intergenic | 30.0% | |
| CACTAAAGATTCTTATCGAT+AGG | + | chr6_4:16730362-16730381 | None:intergenic | 30.0% | |
| ! | TCTTTAGTGCGTATCTATTT+TGG | - | chr6_4:16730373-16730392 | Msa0979480:intron | 30.0% |
| !!! | CTTTTGTTTTCATCTAATGC+AGG | + | chr6_4:16730412-16730431 | None:intergenic | 30.0% |
| !!! | AAACCAGATCTTTTGAGTTT+CGG | + | chr6_4:16730533-16730552 | None:intergenic | 30.0% |
| ! | CTCAGTTTTTCTTCTTCTAT+TGG | + | chr6_4:16730574-16730593 | None:intergenic | 30.0% |
| CAATAGAAGAAGAAAAACTG+AGG | - | chr6_4:16730572-16730591 | Msa0979480:CDS | 30.0% | |
| ! | AAATGAAAGTACAGCAACAT+TGG | - | chr6_4:16730644-16730663 | Msa0979480:CDS | 30.0% |
| ! | AATGAAAGTACAGCAACATT+GGG | - | chr6_4:16730645-16730664 | Msa0979480:CDS | 30.0% |
| GTAATGTCTTACTCTTATAC+AGG | - | chr6_4:16730771-16730790 | Msa0979480:intron | 30.0% | |
| !!! | ATTTGTTTTGAGTTGGCTTT+AGG | + | chr6_4:16730819-16730838 | None:intergenic | 30.0% |
| TCTAGAGAGCTTATGAAAAT+AGG | - | chr6_4:16730947-16730966 | Msa0979480:intron | 30.0% | |
| GTATAAGAATACTCTCAAAG+AGG | + | chr6_4:16731095-16731114 | None:intergenic | 30.0% | |
| GTATCAATATGTTGCATATG+TGG | + | chr6_4:16731149-16731168 | None:intergenic | 30.0% | |
| GCAACATATTGATACAAACT+TGG | - | chr6_4:16731154-16731173 | Msa0979480:CDS | 30.0% | |
| !! | CTTTTAAAGAAGCATGTGAA+AGG | - | chr6_4:16731279-16731298 | Msa0979480:CDS | 30.0% |
| TCACTAATAGGATCAGATAT+TGG | + | chr6_4:16731620-16731639 | None:intergenic | 30.0% | |
| AAAAATAAACGAACCAACCA+CGG | + | chr6_4:16731969-16731988 | None:intergenic | 30.0% | |
| GTTCCTTCTTAAGGTATAAT+TGG | + | chr6_4:16732062-16732081 | None:intergenic | 30.0% | |
| AGAGTGATACTATTACTTGA+GGG | + | chr6_4:16732125-16732144 | None:intergenic | 30.0% | |
| AAGTAATAGTATCACTCTCT+CGG | - | chr6_4:16732127-16732146 | Msa0979480:CDS | 30.0% | |
| ATTATACATTGTCATATGCG+AGG | + | chr6_4:16732195-16732214 | None:intergenic | 30.0% | |
| TCGCATATGACAATGTATAA+TGG | - | chr6_4:16732194-16732213 | Msa0979480:CDS | 30.0% | |
| TAGTGTATTAAGAAGTGAGA+AGG | + | chr6_4:16732550-16732569 | None:intergenic | 30.0% | |
| ! | AATTTGAACGTTGTCTTTTG+AGG | - | chr6_4:16732679-16732698 | Msa0979480:CDS | 30.0% |
| ATAAGTGATGCACTAAACAT+GGG | + | chr6_4:16732776-16732795 | None:intergenic | 30.0% | |
| TGTTAGATATGATCTCCTTA+GGG | - | chr6_4:16733293-16733312 | Msa0979480:five_prime_UTR | 30.0% | |
| TCACAAAACCCATATATCAA+AGG | + | chr6_4:16733419-16733438 | None:intergenic | 30.0% | |
| !! | AACTTGTTACTGGATTCCTA+TGG | - | chr6_4:16728271-16728290 | Msa0979480:intron | 35.0% |
| ! | CAGTTAAAATGCAGTTGATG+CGG | + | chr6_4:16728570-16728589 | None:intergenic | 35.0% |
| TGCGATTGTCTGTAATATCA+AGG | - | chr6_4:16728588-16728607 | Msa0979480:CDS | 35.0% | |
| !!! | AACATGGTTTTAGGCATGAA+AGG | - | chr6_4:16728694-16728713 | Msa0979480:CDS | 35.0% |
| AGAGATCTTAAAGATTGCGA+TGG | + | chr6_4:16728790-16728809 | None:intergenic | 35.0% | |
| GAATTTCAGCGACATTGTTA+AGG | - | chr6_4:16728929-16728948 | Msa0979480:intron | 35.0% | |
| !! | TTAAGGGATGTATCGATTAG+AGG | - | chr6_4:16728946-16728965 | Msa0979480:intron | 35.0% |
| GTTGTAGATTTGGCTGATTA+TGG | - | chr6_4:16729069-16729088 | Msa0979480:CDS | 35.0% | |
| !! | TCGATTTTAACGAACAAGAG+TGG | + | chr6_4:16729165-16729184 | None:intergenic | 35.0% |
| ! | CTAACACGAATCTTTTCAAC+AGG | + | chr6_4:16729189-16729208 | None:intergenic | 35.0% |
| TCGTGTTAGATCTTCGTTAA+AGG | - | chr6_4:16729200-16729219 | Msa0979480:intron | 35.0% | |
| ! | AAAGGAAAGGTTTTCGAATG+AGG | - | chr6_4:16729218-16729237 | Msa0979480:intron | 35.0% |
| ! | GTTTTCGAATGAGGTTTTTG+AGG | - | chr6_4:16729227-16729246 | Msa0979480:intron | 35.0% |
| TTTGAGGAGAATAGTAATGG+TGG | - | chr6_4:16729243-16729262 | Msa0979480:intron | 35.0% | |
| TCTACTTCATTTGAGTCTAG+TGG | - | chr6_4:16729369-16729388 | Msa0979480:CDS | 35.0% | |
| !! | TGGTTTTACACCTCCTAAAT+CGG | - | chr6_4:16729389-16729408 | Msa0979480:CDS | 35.0% |
| TTAGCTTCAGAAACAAAGCT+CGG | - | chr6_4:16729580-16729599 | Msa0979480:intron | 35.0% | |
| ! | GAAAAAAATGCTACTTCACC+GGG | - | chr6_4:16729679-16729698 | Msa0979480:intron | 35.0% |
| TTAGCATTTCTTGCTTCCTT+TGG | + | chr6_4:16729919-16729938 | None:intergenic | 35.0% | |
| TATTCAGTTGTTGCTGAACA+TGG | - | chr6_4:16730027-16730046 | Msa0979480:intron | 35.0% | |
| GCTTGTAGAGAAAATGATCA+AGG | - | chr6_4:16730108-16730127 | Msa0979480:intron | 35.0% | |
| GAGAAAATGATCAAGGAAGA+AGG | - | chr6_4:16730115-16730134 | Msa0979480:intron | 35.0% | |
| AATGATCAAGGAAGAAGGTT+TGG | - | chr6_4:16730120-16730139 | Msa0979480:intron | 35.0% | |
| !! | CGGATTAGTACTTGTTTCTA+AGG | - | chr6_4:16730164-16730183 | Msa0979480:intron | 35.0% |
| TGCTAACATATTCCATCATG+TGG | - | chr6_4:16730453-16730472 | Msa0979480:intron | 35.0% | |
| CTAAGATAGCATCATCACAA+AGG | - | chr6_4:16730607-16730626 | Msa0979480:CDS | 35.0% | |
| TGATCCTCATGTGTTCATTT+CGG | - | chr6_4:16730689-16730708 | Msa0979480:CDS | 35.0% | |
| CTCGAATAGTCGAATCTATA+TGG | - | chr6_4:16730742-16730761 | Msa0979480:CDS | 35.0% | |
| GAATAGTCGAATCTATATGG+TGG | - | chr6_4:16730745-16730764 | Msa0979480:CDS | 35.0% | |
| ! | TATTTAGGGCTTGTTTGGAT+CGG | + | chr6_4:16731067-16731086 | None:intergenic | 35.0% |
| TCAAAGAGGGTTCGTATTTA+GGG | + | chr6_4:16731081-16731100 | None:intergenic | 35.0% | |
| CTCAAGGAAAAGCTATAGAA+GGG | - | chr6_4:16731199-16731218 | Msa0979480:CDS | 35.0% | |
| AGTTCATGTGATCAAGATCT+TGG | - | chr6_4:16731227-16731246 | Msa0979480:CDS | 35.0% | |
| GATCAGATATTGGATCAGTT+GGG | + | chr6_4:16731610-16731629 | None:intergenic | 35.0% | |
| TGATCCTATTAGTGATCCTA+AGG | - | chr6_4:16731625-16731644 | Msa0979480:intron | 35.0% | |
| AGAACCTTAGGATCACTAAT+AGG | + | chr6_4:16731632-16731651 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCCAGGTGGAATA+GGG | + | chr6_4:16731655-16731674 | None:intergenic | 35.0% |
| !! | TCATTTTTGCCTGCTTTAAG+AGG | + | chr6_4:16731784-16731803 | None:intergenic | 35.0% |
| ! | GTTTTCACAATACTGCTTGA+GGG | + | chr6_4:16731846-16731865 | None:intergenic | 35.0% |
| ! | TGTTTTCACAATACTGCTTG+AGG | + | chr6_4:16731847-16731866 | None:intergenic | 35.0% |
| CAGTATTGTGAAAACAGAAC+CGG | - | chr6_4:16731851-16731870 | Msa0979480:CDS | 35.0% | |
| CCAATGAAAGTTCCTTCTTA+AGG | + | chr6_4:16732071-16732090 | None:intergenic | 35.0% | |
| CCTTAAGAAGGAACTTTCAT+TGG | - | chr6_4:16732068-16732087 | Msa0979480:CDS | 35.0% | |
| !! | ACTTTCATTGGTTCAATCTC+CGG | - | chr6_4:16732080-16732099 | Msa0979480:CDS | 35.0% |
| ! | CAATGTTGTTTAAACCAGAC+CGG | + | chr6_4:16732102-16732121 | None:intergenic | 35.0% |
| GAGAGTGATACTATTACTTG+AGG | + | chr6_4:16732126-16732145 | None:intergenic | 35.0% | |
| TGACATCTTCATTGTCAGAT+TGG | - | chr6_4:16732414-16732433 | Msa0979480:intron | 35.0% | |
| GACATCTTCATTGTCAGATT+GGG | - | chr6_4:16732415-16732434 | Msa0979480:intron | 35.0% | |
| !! | GATCTTTAGGAAGCATTAAG+AGG | + | chr6_4:16732578-16732597 | None:intergenic | 35.0% |
| GCACTTAAAAGCAGATCTTT+AGG | + | chr6_4:16732591-16732610 | None:intergenic | 35.0% | |
| !! | TGCTTTTAAGTGCATCCATT+AGG | - | chr6_4:16732598-16732617 | Msa0979480:CDS | 35.0% |
| AGACAACGTTCAAATTTCCT+CGG | + | chr6_4:16732675-16732694 | None:intergenic | 35.0% | |
| ! | AAAGAATCCTTTTAGCACGA+AGG | + | chr6_4:16732738-16732757 | None:intergenic | 35.0% |
| TAAGTGATGCACTAAACATG+GGG | + | chr6_4:16732775-16732794 | None:intergenic | 35.0% | |
| GATAAGTGATGCACTAAACA+TGG | + | chr6_4:16732777-16732796 | None:intergenic | 35.0% | |
| AAAGCTTCAAGAACAGTTGT+AGG | + | chr6_4:16732851-16732870 | None:intergenic | 35.0% | |
| TACAACTGTTCTTGAAGCTT+TGG | - | chr6_4:16732850-16732869 | Msa0979480:CDS | 35.0% | |
| !! | TCTTGAAGCTTTGGATTTAG+AGG | - | chr6_4:16732859-16732878 | Msa0979480:CDS | 35.0% |
| ATGCAAAATGGGAATGAGTT+TGG | - | chr6_4:16733009-16733028 | Msa0979480:CDS | 35.0% | |
| CTAAGGAGATCATATCTAAC+AGG | + | chr6_4:16733294-16733313 | None:intergenic | 35.0% | |
| CTGTTAGATATGATCTCCTT+AGG | - | chr6_4:16733292-16733311 | Msa0979480:five_prime_UTR | 35.0% | |
| TATTCATCCAAACATCCCTA+AGG | + | chr6_4:16733311-16733330 | None:intergenic | 35.0% | |
| !! | AGTGTTAACTTGTGTCCTTA+GGG | + | chr6_4:16733613-16733632 | None:intergenic | 35.0% |
| !! | TAGTGTTAACTTGTGTCCTT+AGG | + | chr6_4:16733614-16733633 | None:intergenic | 35.0% |
| !! | GTGTGTACAAAAGGGTATCT+AGG | + | chr6_4:16728330-16728349 | None:intergenic | 40.0% |
| GTCTGTAATATCAAGGATCG+AGG | - | chr6_4:16728595-16728614 | Msa0979480:CDS | 40.0% | |
| AACAACTGTGACAGTTACCA+CGG | - | chr6_4:16728618-16728637 | Msa0979480:CDS | 40.0% | |
| TTCGATTCTTTCATCTGGTG+AGG | - | chr6_4:16728655-16728674 | Msa0979480:CDS | 40.0% | |
| ! | CTGGTGAGGATTCATCATTT+TGG | - | chr6_4:16728669-16728688 | Msa0979480:CDS | 40.0% |
| GATCTTAAAGATTGCGATGG+AGG | + | chr6_4:16728787-16728806 | None:intergenic | 40.0% | |
| ! | AAACTAGTCTCTCCTTCACT+TGG | - | chr6_4:16728862-16728881 | Msa0979480:CDS | 40.0% |
| GTACATCTTTGAACTGCAAG+AGG | - | chr6_4:16729118-16729137 | Msa0979480:CDS | 40.0% | |
| GATGAATGAAGAATATGCCG+AGG | - | chr6_4:16729284-16729303 | Msa0979480:intron | 40.0% | |
| ATGAGTACCTTGTCCGATTT+AGG | + | chr6_4:16729405-16729424 | None:intergenic | 40.0% | |
| AAGAAGGTAAAGATGCTCGA+AGG | - | chr6_4:16729967-16729986 | Msa0979480:intron | 40.0% | |
| CATGAAGATAAAGCCTCGAA+AGG | + | chr6_4:16730089-16730108 | None:intergenic | 40.0% | |
| !! | GTACTTGTTTCTAAGGCATG+TGG | - | chr6_4:16730171-16730190 | Msa0979480:intron | 40.0% |
| TATGGCTCAAAAACGTACCT+TGG | + | chr6_4:16730207-16730226 | None:intergenic | 40.0% | |
| AAGCCGAAACTCAAAAGATC+TGG | - | chr6_4:16730527-16730546 | Msa0979480:intron | 40.0% | |
| ! | GATCTGGTTTCATCAAGTCA+TGG | - | chr6_4:16730543-16730562 | Msa0979480:intron | 40.0% |
| AGAAGAAAAACTGAGGGAGA+TGG | - | chr6_4:16730579-16730598 | Msa0979480:CDS | 40.0% | |
| AGATAGCATCATCACAAAGG+TGG | - | chr6_4:16730610-16730629 | Msa0979480:CDS | 40.0% | |
| GCAACATTGGGATATGAATG+TGG | - | chr6_4:16730657-16730676 | Msa0979480:CDS | 40.0% | |
| TGGGATATGAATGTGGTAAC+TGG | - | chr6_4:16730664-16730683 | Msa0979480:CDS | 40.0% | |
| GGGATATGAATGTGGTAACT+GGG | - | chr6_4:16730665-16730684 | Msa0979480:CDS | 40.0% | |
| AATGCCGAAATGAACACATG+AGG | + | chr6_4:16730696-16730715 | None:intergenic | 40.0% | |
| TCATGTGTTCATTTCGGCAT+TGG | - | chr6_4:16730695-16730714 | Msa0979480:CDS | 40.0% | |
| ! | GTTCATTTCGGCATTGGAAA+AGG | - | chr6_4:16730701-16730720 | Msa0979480:CDS | 40.0% |
| CATTGGAAAAGGTTGAAGCT+TGG | - | chr6_4:16730712-16730731 | Msa0979480:CDS | 40.0% | |
| TTTAGGCCTCCAAACAAGTT+CGG | + | chr6_4:16730802-16730821 | None:intergenic | 40.0% | |
| AAGCACTTGGTATACTGTTC+AGG | + | chr6_4:16731019-16731038 | None:intergenic | 40.0% | |
| TATCTACTAGCGTAAGCACT+TGG | + | chr6_4:16731032-16731051 | None:intergenic | 40.0% | |
| ! | GTTCGTATTTAGGGCTTGTT+TGG | + | chr6_4:16731072-16731091 | None:intergenic | 40.0% |
| CTCAAAGAGGGTTCGTATTT+AGG | + | chr6_4:16731082-16731101 | None:intergenic | 40.0% | |
| TGATACAAACTTGGCCAACA+AGG | - | chr6_4:16731163-16731182 | Msa0979480:CDS | 40.0% | |
| ! | CCTTCTATAGCTTTTCCTTG+AGG | + | chr6_4:16731201-16731220 | None:intergenic | 40.0% |
| CCTCAAGGAAAAGCTATAGA+AGG | - | chr6_4:16731198-16731217 | Msa0979480:CDS | 40.0% | |
| ATATGTCCGATTAGAGCTGT+AGG | - | chr6_4:16731302-16731321 | Msa0979480:CDS | 40.0% | |
| TATGTCCGATTAGAGCTGTA+GGG | - | chr6_4:16731303-16731322 | Msa0979480:CDS | 40.0% | |
| TTTACCTATGCTTCCTAGAC+TGG | - | chr6_4:16731340-16731359 | Msa0979480:CDS | 40.0% | |
| CTTATAAGACTGACCAGTCT+AGG | + | chr6_4:16731356-16731375 | None:intergenic | 40.0% | |
| TGCTTCACAAGTCACAACTT+TGG | - | chr6_4:16731382-16731401 | Msa0979480:CDS | 40.0% | |
| ATGTGTGGCAAGATTAGATG+TGG | - | chr6_4:16731544-16731563 | Msa0979480:intron | 40.0% | |
| GGATCAGATATTGGATCAGT+TGG | + | chr6_4:16731611-16731630 | None:intergenic | 40.0% | |
| !! | CTTGTTTTTCCAGGTGGAAT+AGG | + | chr6_4:16731656-16731675 | None:intergenic | 40.0% |
| ! | TGGTGCTAAGCTTAAAACTG+TGG | - | chr6_4:16731685-16731704 | Msa0979480:intron | 40.0% |
| ATGAATGTGCCTCTTAAAGC+AGG | - | chr6_4:16731772-16731791 | Msa0979480:CDS | 40.0% | |
| TGCTTGAGGGAATAAACTGA+GGG | + | chr6_4:16731833-16731852 | None:intergenic | 40.0% | |
| CATTCAATTGAACCGGGAAT+CGG | - | chr6_4:16731885-16731904 | Msa0979480:CDS | 40.0% | |
| ! | ATGATCGGTTCAACCATGTT+TGG | - | chr6_4:16731916-16731935 | Msa0979480:CDS | 40.0% |
| TTAGTCGTCTAATTCAACCG+CGG | - | chr6_4:16732022-16732041 | Msa0979480:CDS | 40.0% | |
| !! | TGGTTTAATTTGTTCCACCG+CGG | + | chr6_4:16732042-16732061 | None:intergenic | 40.0% |
| TATGCGAGGAACTAACATGA+TGG | + | chr6_4:16732181-16732200 | None:intergenic | 40.0% | |
| GTATAATGGTAGGGACTAAC+AGG | - | chr6_4:16732208-16732227 | Msa0979480:CDS | 40.0% | |
| TTCATTGTCAGATTGGGAAC+TGG | - | chr6_4:16732421-16732440 | Msa0979480:intron | 40.0% | |
| AGATGGTTGAGTGATCTATG+TGG | - | chr6_4:16732447-16732466 | Msa0979480:intron | 40.0% | |
| TGATCTATGTGGCATGAATG+AGG | - | chr6_4:16732458-16732477 | Msa0979480:intron | 40.0% | |
| AAGTGCATCCATTAGGAATG+AGG | - | chr6_4:16732605-16732624 | Msa0979480:CDS | 40.0% | |
| TTGGCATACCTCATTCCTAA+TGG | + | chr6_4:16732616-16732635 | None:intergenic | 40.0% | |
| !!! | TTACTTTTTTACCGTCTCCG+AGG | - | chr6_4:16732655-16732674 | Msa0979480:CDS | 40.0% |
| ACTAACACCTTCGTGCTAAA+AGG | - | chr6_4:16732728-16732747 | Msa0979480:CDS | 40.0% | |
| TCAAGAACAGTTGTAGGAAC+TGG | + | chr6_4:16732845-16732864 | None:intergenic | 40.0% | |
| AATTGTCTATTCACCTCCAC+CGG | - | chr6_4:16733059-16733078 | Msa0979480:CDS | 40.0% | |
| GCAGCAAATCTTCTGTTGTT+AGG | - | chr6_4:16733136-16733155 | Msa0979480:CDS | 40.0% | |
| ATGATCTCCTTAGGGATGTT+TGG | - | chr6_4:16733301-16733320 | Msa0979480:five_prime_UTR | 40.0% | |
| CTTTCTTAACATGTGCCCTA+AGG | - | chr6_4:16733595-16733614 | Msa0979480:five_prime_UTR | 40.0% | |
| CATTGATGTCATGTGCTGTG+AGG | - | chr6_4:16728504-16728523 | Msa0979480:three_prime_UTR | 45.0% | |
| CCTTAATCGCAGTCATGTTC+TGG | + | chr6_4:16728547-16728566 | None:intergenic | 45.0% | |
| CCAGAACATGACTGCGATTA+AGG | - | chr6_4:16728544-16728563 | Msa0979480:intron | 45.0% | |
| !!! | GAAGTTTTGAATTGTGGCCG+TGG | + | chr6_4:16728638-16728657 | None:intergenic | 45.0% |
| AGTCTCTCCTTCACTTGGTT+CGG | - | chr6_4:16728867-16728886 | Msa0979480:CDS | 45.0% | |
| CCTATAACCGAACCAAGTGA+AGG | + | chr6_4:16728877-16728896 | None:intergenic | 45.0% | |
| !! | CCTTCACTTGGTTCGGTTAT+AGG | - | chr6_4:16728874-16728893 | Msa0979480:CDS | 45.0% |
| !! | CTTGGTTCGGTTATAGGTGA+AGG | - | chr6_4:16728880-16728899 | Msa0979480:CDS | 45.0% |
| GTTCGGTTATAGGTGAAGGA+AGG | - | chr6_4:16728884-16728903 | Msa0979480:CDS | 45.0% | |
| !! | AGGGATGTATCGATTAGAGG+TGG | - | chr6_4:16728949-16728968 | Msa0979480:intron | 45.0% |
| !! | GGGAAGTGCTGTTGTAGATT+TGG | - | chr6_4:16729059-16729078 | Msa0979480:CDS | 45.0% |
| TACACCTCCTAAATCGGACA+AGG | - | chr6_4:16729395-16729414 | Msa0979480:CDS | 45.0% | |
| AGTACCTTGTCCGATTTAGG+AGG | + | chr6_4:16729402-16729421 | None:intergenic | 45.0% | |
| GCTGAACAGTTCATCGTCAA+TGG | - | chr6_4:16729639-16729658 | Msa0979480:intron | 45.0% | |
| GGCGAACAAGATTCAAAACC+CGG | + | chr6_4:16729700-16729719 | None:intergenic | 45.0% | |
| CATGAATAAGGTTCACGCTC+CGG | - | chr6_4:16730056-16730075 | Msa0979480:intron | 45.0% | |
| GCAGCGAAAAGTTCTGTTTC+CGG | - | chr6_4:16730144-16730163 | Msa0979480:intron | 45.0% | |
| CATGTGGAAACGATGTTCCA+AGG | - | chr6_4:16730187-16730206 | Msa0979480:intron | 45.0% | |
| ATATTCCATCATGTGGCTGC+AGG | - | chr6_4:16730460-16730479 | Msa0979480:intron | 45.0% | |
| CTGGTTTCATCAAGTCATGG+TGG | - | chr6_4:16730546-16730565 | Msa0979480:intron | 45.0% | |
| GCATCATCACAAAGGTGGAA+AGG | - | chr6_4:16730615-16730634 | Msa0979480:CDS | 45.0% | |
| AGTCGAATCTATATGGTGGC+AGG | - | chr6_4:16730749-16730768 | Msa0979480:CDS | 45.0% | |
| ! | TCATGCCCTACAGCTCTAAT+CGG | + | chr6_4:16731311-16731330 | None:intergenic | 45.0% |
| !! | CTAGGTAATGGAGCAATGTG+TGG | - | chr6_4:16731529-16731548 | Msa0979480:intron | 45.0% |
| AATGCTATTCTGCGCGAGTT+CGG | - | chr6_4:16731575-16731594 | Msa0979480:intron | 45.0% | |
| !! | CCAAAGCTTGTTTTTCCAGG+TGG | + | chr6_4:16731662-16731681 | None:intergenic | 45.0% |
| CCACCTGGAAAAACAAGCTT+TGG | - | chr6_4:16731659-16731678 | Msa0979480:intron | 45.0% | |
| !! | GCTCCAAAGCTTGTTTTTCC+AGG | + | chr6_4:16731665-16731684 | None:intergenic | 45.0% |
| !! | GGAAAAACAAGCTTTGGAGC+TGG | - | chr6_4:16731665-16731684 | Msa0979480:intron | 45.0% |
| CTGCTTGAGGGAATAAACTG+AGG | + | chr6_4:16731834-16731853 | None:intergenic | 45.0% | |
| GTTCAATTGAATGAACCGGC+TGG | + | chr6_4:16731878-16731897 | None:intergenic | 45.0% | |
| ! | GCCGGTTCATTCAATTGAAC+CGG | - | chr6_4:16731878-16731897 | Msa0979480:CDS | 45.0% |
| CCCGGTTCAATTGAATGAAC+CGG | + | chr6_4:16731882-16731901 | None:intergenic | 45.0% | |
| CCGGTTCATTCAATTGAACC+GGG | - | chr6_4:16731879-16731898 | Msa0979480:CDS | 45.0% | |
| GAATCGGCCAACATGATGAT+CGG | - | chr6_4:16731901-16731920 | Msa0979480:CDS | 45.0% | |
| GGTTGAACCGATCATCATGT+TGG | + | chr6_4:16731911-16731930 | None:intergenic | 45.0% | |
| GCAGGTTTGTGAACCAAACA+TGG | + | chr6_4:16731932-16731951 | None:intergenic | 45.0% | |
| ACGGTTCAACTTGGTTATGC+AGG | + | chr6_4:16731950-16731969 | None:intergenic | 45.0% | |
| ! | TGCATAACCAAGTTGAACCG+TGG | - | chr6_4:16731949-16731968 | Msa0979480:CDS | 45.0% |
| ! | TAACCAAGTTGAACCGTGGT+TGG | - | chr6_4:16731953-16731972 | Msa0979480:CDS | 45.0% |
| ! | AGATTGGGAACTGGTCTAGA+TGG | - | chr6_4:16732430-16732449 | Msa0979480:intron | 45.0% |
| TCTATGTGGCATGAATGAGG+AGG | - | chr6_4:16732461-16732480 | Msa0979480:intron | 45.0% | |
| CGTTCAAATTTCCTCGGAGA+CGG | + | chr6_4:16732669-16732688 | None:intergenic | 45.0% | |
| CAGTTGTAGGAACTGGATCA+GGG | + | chr6_4:16732838-16732857 | None:intergenic | 45.0% | |
| ACAGTTGTAGGAACTGGATC+AGG | + | chr6_4:16732839-16732858 | None:intergenic | 45.0% | |
| ! | CGATTTTGTTGAAACCCTCG+AGG | + | chr6_4:16733238-16733257 | None:intergenic | 45.0% |
| !! | AAAATTATATTATTTCATAT+TGG | - | chr6_4:16731423-16731442 | Msa0979480:intron | 5.0% |
| !! | TTTATGTATATTTATTATAT+GGG | + | chr6_4:16733637-16733656 | None:intergenic | 5.0% |
| !! | ATTTATGTATATTTATTATA+TGG | + | chr6_4:16733638-16733657 | None:intergenic | 5.0% |
| TCGCAGTCATGTTCTGGTCA+CGG | + | chr6_4:16728541-16728560 | None:intergenic | 50.0% | |
| AAAGATTGCGATGGAGGCCA+AGG | + | chr6_4:16728781-16728800 | None:intergenic | 50.0% | |
| AGAGGCAATCTCAGCTTCCT+CGG | + | chr6_4:16729304-16729323 | None:intergenic | 50.0% | |
| TGCTGCAACAGAAGAATGCG+AGG | + | chr6_4:16729346-16729365 | None:intergenic | 50.0% | |
| CGGAGCGTGAACCTTATTCA+TGG | + | chr6_4:16730058-16730077 | None:intergenic | 50.0% | |
| GTTAACCTGCAGCCACATGA+TGG | + | chr6_4:16730468-16730487 | None:intergenic | 50.0% | |
| ! | GTGGCTGCAGGTTAACCTTT+TGG | - | chr6_4:16730472-16730491 | Msa0979480:intron | 50.0% |
| GGCAGAAGCAACTTCCTTGT+TGG | + | chr6_4:16731180-16731199 | None:intergenic | 50.0% | |
| AGGAAGTTGCTTCTGCCTCA+AGG | - | chr6_4:16731183-16731202 | Msa0979480:CDS | 50.0% | |
| ! | CTGACCAGTCTAGGAAGCAT+AGG | + | chr6_4:16731347-16731366 | None:intergenic | 50.0% |
| GGTGGAATAGGGAGAACCTT+AGG | + | chr6_4:16731644-16731663 | None:intergenic | 50.0% | |
| AAGGTTCTCCCTATTCCACC+TGG | - | chr6_4:16731644-16731663 | Msa0979480:intron | 50.0% | |
| ! | ATTGAATGAACCGGCTGGTC+CGG | + | chr6_4:16731873-16731892 | None:intergenic | 50.0% |
| ! | TCATCATGTTGGCCGATTCC+CGG | + | chr6_4:16731900-16731919 | None:intergenic | 50.0% |
| GAACCAACCACGGTTCAACT+TGG | + | chr6_4:16731959-16731978 | None:intergenic | 50.0% | |
| !! | CATTGGTTCAATCTCCGGTC+TGG | - | chr6_4:16732085-16732104 | Msa0979480:CDS | 50.0% |
| !! | GCACGAAGGTGTTAGTTCAG+TGG | + | chr6_4:16732724-16732743 | None:intergenic | 50.0% |
| GGATCAGGGCAAAACTCATC+AGG | + | chr6_4:16732824-16732843 | None:intergenic | 50.0% | |
| CAATTGCAGCTGCAGTGCAT+GGG | + | chr6_4:16733044-16733063 | None:intergenic | 50.0% | |
| ACAATTGCAGCTGCAGTGCA+TGG | + | chr6_4:16733045-16733064 | None:intergenic | 50.0% | |
| ATGCTTGCGACGGAAGTTAC+CGG | + | chr6_4:16733081-16733100 | None:intergenic | 50.0% | |
| ACTTCCGTCGCAAGCATTCT+CGG | - | chr6_4:16733084-16733103 | Msa0979480:CDS | 50.0% | |
| GCAAGCATTCTCGGAGAGAT+TGG | - | chr6_4:16733093-16733112 | Msa0979480:CDS | 50.0% | |
| CAGTCATGTTCTGGTCACGG+AGG | + | chr6_4:16728538-16728557 | None:intergenic | 55.0% | |
| ATAAGGTTCACGCTCCGGCT+CGG | - | chr6_4:16730061-16730080 | Msa0979480:intron | 55.0% | |
| GGCCTCCAAACAAGTTCGGT+CGG | + | chr6_4:16730798-16730817 | None:intergenic | 55.0% | |
| AGAGCTGTAGGGCATGAGTG+TGG | - | chr6_4:16731314-16731333 | Msa0979480:CDS | 55.0% | |
| GAAAACAGAACCGGACCAGC+CGG | - | chr6_4:16731860-16731879 | Msa0979480:CDS | 55.0% | |
| GTCGTCTAATTCAACCGCGG+TGG | - | chr6_4:16732025-16732044 | Msa0979480:CDS | 55.0% | |
| CTCTCCGAGAATGCTTGCGA+CGG | + | chr6_4:16733091-16733110 | None:intergenic | 55.0% | |
| TGTTGAAACCCTCGAGGACG+AGG | + | chr6_4:16733232-16733251 | None:intergenic | 55.0% | |
| ! | CAGGGCCGACCGAACTTGTT+TGG | - | chr6_4:16730790-16730809 | Msa0979480:intron | 60.0% |
| ! | GGCCGACCGAACTTGTTTGG+AGG | - | chr6_4:16730793-16730812 | Msa0979480:intron | 60.0% |
| CTTGCGACGGAAGTTACCGG+TGG | + | chr6_4:16733078-16733097 | None:intergenic | 60.0% | |
| GCGACGGAAGTTACCGGTGG+AGG | + | chr6_4:16733075-16733094 | None:intergenic | 65.0% | |
| TCGGCGATTCCTCGTCCTCG+AGG | - | chr6_4:16733220-16733239 | Msa0979480:exon | 65.0% | |
| CGGCGATTCCTCGTCCTCGA+GGG | - | chr6_4:16733221-16733240 | Msa0979480:exon | 65.0% | |
| !! | AGCCTCGAAAGGCGCCGAGC+CGG | + | chr6_4:16730078-16730097 | None:intergenic | 70.0% |
| !! | CTCCGGCTCGGCGCCTTTCG+AGG | - | chr6_4:16730073-16730092 | Msa0979480:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 16728252 | 16733669 | 16728252 | ID=Msa0979480;Name=Msa0979480 |
| chr6_4 | mRNA | 16728252 | 16733669 | 16728252 | ID=Msa0979480-mRNA-1;Parent=Msa0979480;Name=Msa0979480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=445|1|1|1|0.77|0.7|10|117|911 |
| chr6_4 | exon | 16728252 | 16728282 | 16728252 | ID=Msa0979480-mRNA-1:exon:5283;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16728477 | 16728549 | 16728477 | ID=Msa0979480-mRNA-1:exon:5282;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16728570 | 16728918 | 16728570 | ID=Msa0979480-mRNA-1:exon:5281;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16729041 | 16729154 | 16729041 | ID=Msa0979480-mRNA-1:exon:5280;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16729295 | 16729489 | 16729295 | ID=Msa0979480-mRNA-1:exon:5279;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16730215 | 16730388 | 16730215 | ID=Msa0979480-mRNA-1:exon:5278;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16730560 | 16730784 | 16730560 | ID=Msa0979480-mRNA-1:exon:5277;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16731151 | 16731439 | 16731151 | ID=Msa0979480-mRNA-1:exon:5276;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16731713 | 16732395 | 16731713 | ID=Msa0979480-mRNA-1:exon:5275;Parent=Msa0979480-mRNA-1 |
| chr6_4 | exon | 16732505 | 16733669 | 16732505 | ID=Msa0979480-mRNA-1:exon:5274;Parent=Msa0979480-mRNA-1 |
| chr6_4 | five_prime_UTR | 16733225 | 16733669 | 16733225 | ID=Msa0979480-mRNA-1:five_prime_utr;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16732505 | 16733224 | 16732505 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16731713 | 16732395 | 16731713 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16731151 | 16731439 | 16731151 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16730560 | 16730784 | 16730560 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16730215 | 16730388 | 16730215 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16729295 | 16729489 | 16729295 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16729041 | 16729154 | 16729041 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | CDS | 16728583 | 16728918 | 16728583 | ID=Msa0979480-mRNA-1:cds;Parent=Msa0979480-mRNA-1 |
| chr6_4 | three_prime_UTR | 16728570 | 16728582 | 16728570 | ID=Msa0979480-mRNA-1:three_prime_utr;Parent=Msa0979480-mRNA-1 |
| chr6_4 | three_prime_UTR | 16728477 | 16728549 | 16728477 | ID=Msa0979480-mRNA-1:three_prime_utr;Parent=Msa0979480-mRNA-1 |
| chr6_4 | three_prime_UTR | 16728252 | 16728282 | 16728252 | ID=Msa0979480-mRNA-1:three_prime_utr;Parent=Msa0979480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
