Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997030 | XP_003620219.1 | 62.061 | 427 | 88 | 8 | 2 | 425 | 1 | 356 | 7.61e-157 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997030 | sp|P26204|BGLS_TRIRP | 49.367 | 79 | 35 | 2 | 1 | 79 | 4 | 77 | 5.74e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997030 | G7KKU1 | 62.061 | 427 | 88 | 8 | 2 | 425 | 1 | 356 | 3.64e-157 | 457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0708310 | Msa0997030 | 0.827905 | 1.208364e-54 | -8.615850e-47 |
| Msa0419910 | Msa0997030 | 0.806607 | 7.577077e-50 | -8.615850e-47 |
| Msa0997030 | Msa1353890 | 0.814281 | 1.668571e-51 | -8.615850e-47 |
| Msa0348550 | Msa0997030 | 0.817624 | 2.994877e-52 | -8.615850e-47 |
| Msa0574600 | Msa0997030 | 0.819304 | 1.246077e-52 | -8.615850e-47 |
| Msa0898910 | Msa0997030 | 0.802811 | 4.700339e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997030 | MtrunA17_Chr6g0482231 | 62.061 | 427 | 88 | 8 | 2 | 425 | 1 | 356 | 7.00e-161 | 457 |
| Msa0997030 | MtrunA17_Chr6g0482191 | 56.938 | 418 | 83 | 4 | 86 | 424 | 322 | 721 | 2.23e-141 | 420 |
| Msa0997030 | MtrunA17_Chr6g0482151 | 70.625 | 160 | 47 | 0 | 169 | 328 | 1 | 160 | 2.29e-75 | 232 |
| Msa0997030 | MtrunA17_Chr5g0432181 | 42.254 | 213 | 115 | 5 | 162 | 370 | 17 | 225 | 4.66e-42 | 151 |
| Msa0997030 | MtrunA17_Chr5g0431741 | 46.286 | 175 | 89 | 3 | 162 | 336 | 17 | 186 | 1.57e-40 | 153 |
| Msa0997030 | MtrunA17_Chr5g0431811 | 45.349 | 172 | 93 | 1 | 162 | 333 | 17 | 187 | 3.52e-40 | 153 |
| Msa0997030 | MtrunA17_Chr5g0431921 | 42.487 | 193 | 102 | 2 | 162 | 346 | 17 | 208 | 8.17e-40 | 143 |
| Msa0997030 | MtrunA17_Chr5g0432041 | 43.850 | 187 | 100 | 2 | 162 | 344 | 18 | 203 | 6.65e-39 | 148 |
| Msa0997030 | MtrunA17_Chr5g0431761 | 32.601 | 273 | 165 | 5 | 162 | 424 | 17 | 280 | 1.02e-38 | 147 |
| Msa0997030 | MtrunA17_Chr5g0431981 | 44.643 | 168 | 89 | 2 | 162 | 329 | 17 | 180 | 1.82e-38 | 142 |
| Msa0997030 | MtrunA17_Chr7g0231451 | 39.234 | 209 | 107 | 6 | 162 | 362 | 14 | 210 | 1.91e-38 | 140 |
| Msa0997030 | MtrunA17_Chr5g0444661 | 46.626 | 163 | 81 | 2 | 162 | 319 | 18 | 179 | 3.83e-37 | 140 |
| Msa0997030 | MtrunA17_Chr5g0432091 | 43.575 | 179 | 95 | 2 | 162 | 335 | 17 | 194 | 7.49e-35 | 137 |
| Msa0997030 | MtrunA17_Chr3g0104851 | 45.342 | 161 | 83 | 2 | 162 | 318 | 31 | 190 | 1.07e-33 | 133 |
| Msa0997030 | MtrunA17_Chr5g0432031 | 37.745 | 204 | 106 | 5 | 163 | 362 | 29 | 215 | 1.07e-33 | 126 |
| Msa0997030 | MtrunA17_Chr6g0480951 | 62.500 | 96 | 35 | 1 | 153 | 247 | 216 | 311 | 2.90e-31 | 121 |
| Msa0997030 | MtrunA17_Chr5g0431991 | 41.176 | 170 | 99 | 1 | 162 | 331 | 17 | 185 | 2.85e-30 | 121 |
| Msa0997030 | MtrunA17_Chr5g0431821 | 40.000 | 180 | 101 | 3 | 162 | 337 | 17 | 193 | 2.40e-29 | 118 |
| Msa0997030 | MtrunA17_Chr5g0431951 | 49.558 | 113 | 51 | 3 | 162 | 272 | 31 | 139 | 3.85e-28 | 108 |
| Msa0997030 | MtrunA17_Chr5g0432051 | 33.772 | 228 | 130 | 5 | 162 | 384 | 28 | 239 | 7.09e-28 | 110 |
| Msa0997030 | MtrunA17_Chr6g0482081 | 68.354 | 79 | 25 | 0 | 2 | 80 | 1 | 79 | 1.45e-27 | 114 |
| Msa0997030 | MtrunA17_Chr5g0431801 | 38.037 | 163 | 100 | 1 | 162 | 323 | 17 | 179 | 3.02e-27 | 110 |
| Msa0997030 | MtrunA17_Chr5g0431851 | 38.514 | 148 | 89 | 2 | 162 | 308 | 17 | 163 | 1.07e-26 | 108 |
| Msa0997030 | MtrunA17_Chr6g0482131 | 67.949 | 78 | 25 | 0 | 2 | 79 | 1 | 78 | 1.09e-25 | 109 |
| Msa0997030 | MtrunA17_Chr6g0482211 | 62.963 | 81 | 29 | 1 | 158 | 237 | 99 | 179 | 6.73e-24 | 97.8 |
| Msa0997030 | MtrunA17_Chr5g0444671 | 36.970 | 165 | 80 | 3 | 163 | 327 | 15 | 155 | 4.14e-23 | 95.5 |
| Msa0997030 | MtrunA17_Chr6g0482071 | 61.333 | 75 | 28 | 1 | 5 | 79 | 6 | 79 | 3.84e-21 | 95.5 |
| Msa0997030 | MtrunA17_Chr5g0431751 | 35.329 | 167 | 82 | 3 | 164 | 329 | 19 | 160 | 1.32e-19 | 88.6 |
| Msa0997030 | MtrunA17_Chr4g0033201 | 54.930 | 71 | 29 | 2 | 12 | 79 | 8 | 78 | 1.59e-15 | 78.6 |
| Msa0997030 | MtrunA17_Chr3g0087191 | 76.190 | 42 | 10 | 0 | 38 | 79 | 23 | 64 | 1.77e-15 | 73.9 |
| Msa0997030 | MtrunA17_Chr2g0329201 | 51.389 | 72 | 34 | 1 | 8 | 79 | 3 | 73 | 3.41e-15 | 77.4 |
| Msa0997030 | MtrunA17_Chr2g0329321 | 53.333 | 75 | 29 | 2 | 5 | 79 | 12 | 80 | 1.36e-14 | 75.5 |
| Msa0997030 | MtrunA17_Chr4g0033321 | 73.810 | 42 | 11 | 0 | 38 | 79 | 34 | 75 | 2.19e-14 | 75.1 |
| Msa0997030 | MtrunA17_Chr4g0033271 | 44.304 | 79 | 34 | 1 | 1 | 79 | 9 | 77 | 4.53e-14 | 73.9 |
| Msa0997030 | MtrunA17_Chr4g0033261 | 52.239 | 67 | 32 | 0 | 13 | 79 | 17 | 83 | 6.69e-14 | 73.6 |
| Msa0997030 | MtrunA17_Chr4g0033311 | 46.835 | 79 | 37 | 2 | 1 | 79 | 8 | 81 | 1.58e-13 | 72.4 |
| Msa0997030 | MtrunA17_Chr4g0010501 | 46.154 | 78 | 28 | 1 | 2 | 79 | 3 | 66 | 3.22e-13 | 71.2 |
| Msa0997030 | MtrunA17_Chr4g0033331 | 71.429 | 42 | 12 | 0 | 38 | 79 | 40 | 81 | 3.39e-13 | 71.2 |
| Msa0997030 | MtrunA17_Chr4g0033401 | 71.429 | 42 | 12 | 0 | 38 | 79 | 35 | 76 | 3.81e-13 | 71.2 |
| Msa0997030 | MtrunA17_Chr3g0088441 | 69.048 | 42 | 13 | 0 | 38 | 79 | 39 | 80 | 6.05e-13 | 70.5 |
| Msa0997030 | MtrunA17_Chr2g0329191 | 65.306 | 49 | 16 | 1 | 31 | 79 | 29 | 76 | 1.10e-12 | 69.7 |
| Msa0997030 | MtrunA17_Chr5g0431961 | 45.333 | 75 | 38 | 2 | 162 | 236 | 18 | 89 | 2.11e-12 | 62.8 |
| Msa0997030 | MtrunA17_Chr4g0033341 | 47.826 | 69 | 34 | 2 | 12 | 79 | 44 | 111 | 2.32e-12 | 68.6 |
| Msa0997030 | MtrunA17_Chr6g0482201 | 56.897 | 58 | 18 | 1 | 158 | 215 | 46 | 96 | 1.66e-11 | 62.4 |
| Msa0997030 | MtrunA17_Chr2g0301221 | 70.000 | 40 | 11 | 1 | 42 | 81 | 70 | 108 | 1.71e-11 | 61.2 |
| Msa0997030 | MtrunA17_Chr5g0431911 | 47.143 | 70 | 37 | 0 | 164 | 233 | 19 | 88 | 1.99e-11 | 62.0 |
| Msa0997030 | MtrunA17_Chr5g0430451 | 42.667 | 75 | 42 | 1 | 5 | 79 | 8 | 81 | 2.98e-11 | 65.1 |
| Msa0997030 | MtrunA17_Chr3g0087271 | 43.210 | 81 | 42 | 2 | 2 | 79 | 1 | 80 | 3.25e-11 | 65.1 |
| Msa0997030 | MtrunA17_Chr4g0033191 | 51.786 | 56 | 25 | 1 | 38 | 91 | 44 | 99 | 5.35e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997030 | AT3G60120.1 | 60.870 | 46 | 18 | 0 | 37 | 82 | 14 | 59 | 1.34e-11 | 66.6 |
| Msa0997030 | AT3G62750.7 | 40.000 | 90 | 37 | 2 | 8 | 92 | 6 | 83 | 1.77e-11 | 65.9 |
| Msa0997030 | AT3G62750.8 | 40.000 | 90 | 37 | 2 | 8 | 92 | 6 | 83 | 1.77e-11 | 65.9 |
| Msa0997030 | AT3G62750.3 | 40.000 | 90 | 37 | 2 | 8 | 92 | 32 | 109 | 2.01e-11 | 65.9 |
| Msa0997030 | AT3G62750.1 | 40.000 | 90 | 37 | 2 | 8 | 92 | 6 | 83 | 3.31e-11 | 65.5 |
| Msa0997030 | AT3G62750.4 | 40.000 | 90 | 37 | 2 | 8 | 92 | 32 | 109 | 3.36e-11 | 65.5 |
| Msa0997030 | AT3G62750.2 | 40.000 | 90 | 37 | 2 | 8 | 92 | 32 | 109 | 3.52e-11 | 65.5 |
Find 86 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATTGGATGCTGATTT+TGG | 0.170598 | 6_4:+76019058 | Msa0997030:CDS |
| GGATAAAATTTATTTCTTAA+AGG | 0.208461 | 6_4:+76018012 | Msa0997030:CDS |
| ATATTTCAGGTTTCCCATTC+AGG | 0.219499 | 6_4:-76018911 | None:intergenic |
| GAAACTATACTCAATATTTC+AGG | 0.220140 | 6_4:-76018924 | None:intergenic |
| ATTGTCAAGTTATCTCTTTA+TGG | 0.226787 | 6_4:+76018747 | Msa0997030:CDS |
| CCTTCTTTCAACCGTTTAAT+TGG | 0.273513 | 6_4:+76018714 | Msa0997030:CDS |
| CAGAGGTTGGGAAATGTATT+AGG | 0.281141 | 6_4:+76017975 | Msa0997030:CDS |
| ATCAAGTTTGGATTTGAAAT+AGG | 0.287573 | 6_4:+76018990 | Msa0997030:CDS |
| TTGTCAAGTTATCTCTTTAT+GGG | 0.300075 | 6_4:+76018748 | Msa0997030:CDS |
| CAAATTATTGATGAATCTTC+AGG | 0.301807 | 6_4:+76019155 | Msa0997030:CDS |
| GAACTTACTAATATCAATAT+TGG | 0.304522 | 6_4:-76017152 | None:intergenic |
| AACCTTGTGGGAAACTAGTT+TGG | 0.321577 | 6_4:-76017180 | None:intergenic |
| AAATCCAAACTTGATCAGTT+TGG | 0.327879 | 6_4:-76018982 | None:intergenic |
| GTGGCAGAGGACCAAGTATA+TGG | 0.339662 | 6_4:+76017341 | Msa0997030:CDS |
| GATACCTCTTGTTCGGAATC+TGG | 0.340784 | 6_4:-76019305 | None:intergenic |
| GATACCTCTTGTTGGTAATC+TGG | 0.354367 | 6_4:-76019251 | None:intergenic |
| CAAAATCAGCATCCAATTGA+TGG | 0.385609 | 6_4:-76019057 | None:intergenic |
| TGACTTTCATTGCCAACATC+TGG | 0.386088 | 6_4:-76019209 | None:intergenic |
| GGCTCTGAGCATAACATAAT+AGG | 0.386384 | 6_4:-76018692 | None:intergenic |
| TTCACTAGATACCTCTTGTT+CGG | 0.386780 | 6_4:-76019312 | None:intergenic |
| TACAACTTTGGACCATCAAT+TGG | 0.389081 | 6_4:+76019045 | Msa0997030:CDS |
| GAACTGCTTTACAATCAATA+TGG | 0.390154 | 6_4:-76018796 | None:intergenic |
| GGCATATTTGCTTATTTCCT+AGG | 0.391064 | 6_4:+76019011 | Msa0997030:CDS |
| CTGTCCAAACTGATCAAGTT+TGG | 0.393237 | 6_4:+76018978 | Msa0997030:CDS |
| CAACGGCGGTAAGGAGAAAA+TGG | 0.397107 | 6_4:+76017922 | Msa0997030:CDS |
| TGTTCCATCTTCCAATTAAA+CGG | 0.405269 | 6_4:-76018725 | None:intergenic |
| ATCCGTGTCGACCTCATCTT+GGG | 0.409653 | 6_4:-76019132 | None:intergenic |
| CCAATTAAACGGTTGAAAGA+AGG | 0.413893 | 6_4:-76018714 | None:intergenic |
| TTTGAGTTTAACATATTGTC+TGG | 0.422341 | 6_4:-76018826 | None:intergenic |
| GATCCGTGTCGACCTCATCT+TGG | 0.438139 | 6_4:-76019133 | None:intergenic |
| TATTTCAGGTTTCCCATTCA+GGG | 0.444117 | 6_4:-76018910 | None:intergenic |
| AATCAATATGGTTGTAAAGA+TGG | 0.446101 | 6_4:-76018784 | None:intergenic |
| GCAGAGAATGTTAGTGGCAG+AGG | 0.455904 | 6_4:+76017328 | Msa0997030:CDS |
| AACAGCTTCATCAGCTTACC+AGG | 0.458974 | 6_4:+76017213 | Msa0997030:CDS |
| TTTCACTAGATACCTCTTGT+TGG | 0.460980 | 6_4:-76019259 | None:intergenic |
| CAAAACTTACGTGAGCTTTG+CGG | 0.464581 | 6_4:+76018845 | Msa0997030:CDS |
| AAATAGTAGTTTAAGAGTGA+TGG | 0.473895 | 6_4:+76018136 | Msa0997030:CDS |
| CAAACTTGATCAGTTTGGAC+AGG | 0.477204 | 6_4:-76018977 | None:intergenic |
| CAATTAAACGGTTGAAAGAA+GGG | 0.480608 | 6_4:-76018713 | None:intergenic |
| TCAACCGTTTAATTGGAAGA+TGG | 0.481054 | 6_4:+76018721 | Msa0997030:CDS |
| AAGAATCACCAACAGAGGTT+GGG | 0.485086 | 6_4:+76017963 | Msa0997030:CDS |
| GTTGCCTAGTGGTACAACTT+TGG | 0.490214 | 6_4:+76019033 | Msa0997030:CDS |
| ATTACGACAAAGCCCTGAAT+GGG | 0.494175 | 6_4:+76018898 | Msa0997030:CDS |
| TATTACGACAAAGCCCTGAA+TGG | 0.498085 | 6_4:+76018897 | Msa0997030:CDS |
| CAAGAATCACCAACAGAGGT+TGG | 0.498171 | 6_4:+76017962 | Msa0997030:CDS |
| GGCCTTGTCTCAAGTGTAGT+AGG | 0.500535 | 6_4:+76018669 | Msa0997030:CDS |
| GATCCAGAGGTTGGTAATGC+TGG | 0.501282 | 6_4:+76019182 | Msa0997030:CDS |
| GTAGTTTAAGAGTGATGGAA+TGG | 0.510903 | 6_4:+76018141 | Msa0997030:CDS |
| ATACATTTCCCAACCTCTGT+TGG | 0.516765 | 6_4:-76017971 | None:intergenic |
| GCTAGTCGTGGAAGTGATCA+AGG | 0.518571 | 6_4:+76019374 | Msa0997030:CDS |
| TTATTTCTTAAAGGAATACA+AGG | 0.522569 | 6_4:+76018021 | Msa0997030:CDS |
| CATAGGTATCAACGGCGGTA+AGG | 0.524866 | 6_4:+76017913 | Msa0997030:intron |
| GAAGGTGCAGAGAATGTTAG+TGG | 0.533158 | 6_4:+76017322 | Msa0997030:CDS |
| AACGCATTGTGGAGACTAGT+TGG | 0.536275 | 6_4:+76018648 | Msa0997030:CDS |
| TGGCAGAGGACCAAGTATAT+GGG | 0.537417 | 6_4:+76017342 | Msa0997030:CDS |
| AGTTTAACATATTGTCTGGA+AGG | 0.538072 | 6_4:-76018822 | None:intergenic |
| TGACCAGCATTACCAACCTC+TGG | 0.543355 | 6_4:-76019185 | None:intergenic |
| CTTCCACGACTAGCAACCTC+TGG | 0.548065 | 6_4:-76019365 | None:intergenic |
| TCAGGTTCTGATCCAGAGGT+TGG | 0.551185 | 6_4:+76019173 | Msa0997030:CDS |
| AATTCTACACATAAATATCC+AGG | 0.552086 | 6_4:+76017367 | Msa0997030:CDS |
| TTTCTAATGCCAACGCATTG+TGG | 0.556337 | 6_4:+76018637 | Msa0997030:CDS |
| ACGACTAGCAACCTCTGGTA+TGG | 0.570773 | 6_4:-76019360 | None:intergenic |
| ATACCAGAGGTTGCTAGTCG+TGG | 0.574240 | 6_4:+76019362 | Msa0997030:CDS |
| GTTGTACCACTAGGCAACCT+AGG | 0.575583 | 6_4:-76019028 | None:intergenic |
| TGTCAAGTTATCTCTTTATG+GGG | 0.577747 | 6_4:+76018749 | Msa0997030:CDS |
| GAATCTATCATAGGTATCAA+CGG | 0.579667 | 6_4:+76017905 | Msa0997030:intron |
| GTCTTCACATTCCCAAGATG+AGG | 0.585830 | 6_4:+76019121 | Msa0997030:CDS |
| ATCTTCAGGTTCTGATCCAG+AGG | 0.586848 | 6_4:+76019169 | Msa0997030:CDS |
| ATGGAAAGCATATGACATGT+TGG | 0.591739 | 6_4:+76018160 | Msa0997030:CDS |
| GTAGAATTATCCCATATACT+TGG | 0.591854 | 6_4:-76017352 | None:intergenic |
| TATTAGGTTATTGTTGCCTG+AGG | 0.594730 | 6_4:+76017991 | Msa0997030:CDS |
| GTATCCAGATTCCGAACAAG+AGG | 0.601744 | 6_4:+76019301 | Msa0997030:CDS |
| AACTAGTCTCCACAATGCGT+TGG | 0.611582 | 6_4:-76018646 | None:intergenic |
| CAGTTCAGTTACCATACCAG+AGG | 0.619875 | 6_4:+76019349 | Msa0997030:CDS |
| TATGGTTGTAAAGATGGCCA+AGG | 0.621407 | 6_4:-76018778 | None:intergenic |
| TGGTCCAAAGTTGTACCACT+AGG | 0.621978 | 6_4:-76019037 | None:intergenic |
| TTGTCAAGAATCACCAACAG+AGG | 0.625171 | 6_4:+76017958 | Msa0997030:CDS |
| GTATCCAGATTACCAACAAG+AGG | 0.626368 | 6_4:+76019247 | Msa0997030:CDS |
| CATGTTGGATGAGTTTACAA+TGG | 0.626953 | 6_4:+76018175 | Msa0997030:CDS |
| TTCCCAAGATGAGGTCGACA+CGG | 0.642015 | 6_4:+76019130 | Msa0997030:CDS |
| AACCAAACTAGTTTCCCACA+AGG | 0.644502 | 6_4:+76017178 | Msa0997030:CDS |
| GACGAATGCATAACAAAGAG+CGG | 0.650418 | 6_4:-76019101 | None:intergenic |
| AATGCTGGTCAGCCAGATGT+TGG | 0.654407 | 6_4:+76019197 | Msa0997030:CDS |
| GGCCTACTACACTTGAGACA+AGG | 0.656070 | 6_4:-76018671 | None:intergenic |
| TTATTTCCTAGGTTGCCTAG+TGG | 0.658460 | 6_4:+76019022 | Msa0997030:CDS |
| TCTATCATAGGTATCAACGG+CGG | 0.766911 | 6_4:+76017908 | Msa0997030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTAATATTGAAATATT+TGG | - | chr6_4:76017249-76017268 | None:intergenic | 10.0% |
| !! | AGTAAAAAATATAATAATTC+AGG | + | chr6_4:76017572-76017591 | Msa0997030:intron | 10.0% |
| !! | AAAAGAAATTTAGTTAATTA+GGG | - | chr6_4:76018448-76018467 | None:intergenic | 10.0% |
| !! | TAAAAGAAATTTAGTTAATT+AGG | - | chr6_4:76018449-76018468 | None:intergenic | 10.0% |
| !! | AGAATTAATATTGAAATATT+TGG | - | chr6_4:76017249-76017268 | None:intergenic | 10.0% |
| !! | AGTAAAAAATATAATAATTC+AGG | + | chr6_4:76017572-76017591 | Msa0997030:intron | 10.0% |
| !! | AAAAGAAATTTAGTTAATTA+GGG | - | chr6_4:76018448-76018467 | None:intergenic | 10.0% |
| !! | TAAAAGAAATTTAGTTAATT+AGG | - | chr6_4:76018449-76018468 | None:intergenic | 10.0% |
| !!! | ATGAATAAATTTTAGTATGA+AGG | + | chr6_4:76017304-76017323 | Msa0997030:intron | 15.0% |
| !!! | GGATAAAATTTATTTCTTAA+AGG | + | chr6_4:76018012-76018031 | Msa0997030:CDS | 15.0% |
| !!! | TTAGTGTTTTTTGAATTTAA+AGG | + | chr6_4:76018112-76018131 | Msa0997030:intron | 15.0% |
| !!! | TAGTGTTTTTTGAATTTAAA+GGG | + | chr6_4:76018113-76018132 | Msa0997030:intron | 15.0% |
| !!! | ATGAATAAATTTTAGTATGA+AGG | + | chr6_4:76017304-76017323 | Msa0997030:intron | 15.0% |
| !!! | GGATAAAATTTATTTCTTAA+AGG | + | chr6_4:76018012-76018031 | Msa0997030:CDS | 15.0% |
| !!! | TTAGTGTTTTTTGAATTTAA+AGG | + | chr6_4:76018112-76018131 | Msa0997030:intron | 15.0% |
| !!! | TAGTGTTTTTTGAATTTAAA+GGG | + | chr6_4:76018113-76018132 | Msa0997030:intron | 15.0% |
| !! | GAACTTACTAATATCAATAT+TGG | - | chr6_4:76017155-76017174 | None:intergenic | 20.0% |
| !!! | ACTAAACTTGAAAAATTTTG+AGG | - | chr6_4:76017518-76017537 | None:intergenic | 20.0% |
| !!! | AAAAAAAAACACAACGATTT+TGG | + | chr6_4:76017632-76017651 | Msa0997030:intron | 20.0% |
| !!! | AAAAAAAACACAACGATTTT+GGG | + | chr6_4:76017633-76017652 | Msa0997030:intron | 20.0% |
| !! | AAAAATGCTTATGAAAAACT+AGG | - | chr6_4:76017705-76017724 | None:intergenic | 20.0% |
| !! | TTATATTGTTAACACAGAAA+AGG | + | chr6_4:76017750-76017769 | Msa0997030:intron | 20.0% |
| !!! | AAGAAATAAATTTTATCCTC+AGG | - | chr6_4:76018010-76018029 | None:intergenic | 20.0% |
| !!! | TTATTTCTTAAAGGAATACA+AGG | + | chr6_4:76018021-76018040 | Msa0997030:CDS | 20.0% |
| !! | AGGTAAATGAAATTTAACAA+AGG | + | chr6_4:76018376-76018395 | Msa0997030:intron | 20.0% |
| !! | GAACTTACTAATATCAATAT+TGG | - | chr6_4:76017155-76017174 | None:intergenic | 20.0% |
| !!! | ACTAAACTTGAAAAATTTTG+AGG | - | chr6_4:76017518-76017537 | None:intergenic | 20.0% |
| !!! | AAAAAAAAACACAACGATTT+TGG | + | chr6_4:76017632-76017651 | Msa0997030:intron | 20.0% |
| !!! | AAAAAAAACACAACGATTTT+GGG | + | chr6_4:76017633-76017652 | Msa0997030:intron | 20.0% |
| !! | AAAAATGCTTATGAAAAACT+AGG | - | chr6_4:76017705-76017724 | None:intergenic | 20.0% |
| !! | TTATATTGTTAACACAGAAA+AGG | + | chr6_4:76017750-76017769 | Msa0997030:intron | 20.0% |
| !!! | AAGAAATAAATTTTATCCTC+AGG | - | chr6_4:76018010-76018029 | None:intergenic | 20.0% |
| !!! | TTATTTCTTAAAGGAATACA+AGG | + | chr6_4:76018021-76018040 | Msa0997030:CDS | 20.0% |
| !! | AGGTAAATGAAATTTAACAA+AGG | + | chr6_4:76018376-76018395 | Msa0997030:intron | 20.0% |
| ! | TTCCAAAAATAAAACCTTGT+GGG | - | chr6_4:76017195-76017214 | None:intergenic | 25.0% |
| ! | AATTCTACACATAAATATCC+AGG | + | chr6_4:76017367-76017386 | Msa0997030:CDS | 25.0% |
| !! | AAAGTTGCATTTTATACCTT+CGG | - | chr6_4:76017452-76017471 | None:intergenic | 25.0% |
| !! | GTATAAAATGCAACTTTTAC+TGG | + | chr6_4:76017455-76017474 | Msa0997030:intron | 25.0% |
| !!! | TTTACTGGTTTTTACACTTT+CGG | + | chr6_4:76017470-76017489 | Msa0997030:intron | 25.0% |
| !!! | ATTTTGAGGATTGTTTACAT+CGG | - | chr6_4:76017504-76017523 | None:intergenic | 25.0% |
| !! | AAAAAAACACAACGATTTTG+GGG | + | chr6_4:76017634-76017653 | Msa0997030:intron | 25.0% |
| !! | GGGGATTTTTAATAATGTAA+GGG | + | chr6_4:76017654-76017673 | Msa0997030:intron | 25.0% |
| !! | GATTTTTAATAATGTAAGGG+TGG | + | chr6_4:76017657-76017676 | Msa0997030:intron | 25.0% |
| ! | GTGTTAACAATATAATGTGA+GGG | - | chr6_4:76017745-76017764 | None:intergenic | 25.0% |
| ! | TGTGTTAACAATATAATGTG+AGG | - | chr6_4:76017746-76017765 | None:intergenic | 25.0% |
| ! | TAGATTCATCAATCAAAACA+TGG | - | chr6_4:76017892-76017911 | None:intergenic | 25.0% |
| ! | TTGATTGATGAATCTATCAT+AGG | + | chr6_4:76017896-76017915 | Msa0997030:intron | 25.0% |
| ! | AAATAGTAGTTTAAGAGTGA+TGG | + | chr6_4:76018136-76018155 | Msa0997030:CDS | 25.0% |
| ! | ATTGTCAAGTTATCTCTTTA+TGG | + | chr6_4:76018747-76018766 | Msa0997030:CDS | 25.0% |
| ! | TTGTCAAGTTATCTCTTTAT+GGG | + | chr6_4:76018748-76018767 | Msa0997030:CDS | 25.0% |
| ! | AATCAATATGGTTGTAAAGA+TGG | - | chr6_4:76018787-76018806 | None:intergenic | 25.0% |
| !! | TTTGAGTTTAACATATTGTC+TGG | - | chr6_4:76018829-76018848 | None:intergenic | 25.0% |
| ! | GAAACTATACTCAATATTTC+AGG | - | chr6_4:76018927-76018946 | None:intergenic | 25.0% |
| !! | ATCAAGTTTGGATTTGAAAT+AGG | + | chr6_4:76018990-76019009 | Msa0997030:CDS | 25.0% |
| !!! | ATTTTGGTTGCTATAATCTT+TGG | + | chr6_4:76019074-76019093 | Msa0997030:CDS | 25.0% |
| ! | CAAATTATTGATGAATCTTC+AGG | + | chr6_4:76019155-76019174 | Msa0997030:CDS | 25.0% |
| ! | TTCCAAAAATAAAACCTTGT+GGG | - | chr6_4:76017195-76017214 | None:intergenic | 25.0% |
| ! | AATTCTACACATAAATATCC+AGG | + | chr6_4:76017367-76017386 | Msa0997030:CDS | 25.0% |
| !! | AAAGTTGCATTTTATACCTT+CGG | - | chr6_4:76017452-76017471 | None:intergenic | 25.0% |
| !! | GTATAAAATGCAACTTTTAC+TGG | + | chr6_4:76017455-76017474 | Msa0997030:intron | 25.0% |
| !!! | TTTACTGGTTTTTACACTTT+CGG | + | chr6_4:76017470-76017489 | Msa0997030:intron | 25.0% |
| !!! | ATTTTGAGGATTGTTTACAT+CGG | - | chr6_4:76017504-76017523 | None:intergenic | 25.0% |
| !! | AAAAAAACACAACGATTTTG+GGG | + | chr6_4:76017634-76017653 | Msa0997030:intron | 25.0% |
| !! | GGGGATTTTTAATAATGTAA+GGG | + | chr6_4:76017654-76017673 | Msa0997030:intron | 25.0% |
| !! | GATTTTTAATAATGTAAGGG+TGG | + | chr6_4:76017657-76017676 | Msa0997030:intron | 25.0% |
| ! | GTGTTAACAATATAATGTGA+GGG | - | chr6_4:76017745-76017764 | None:intergenic | 25.0% |
| ! | TGTGTTAACAATATAATGTG+AGG | - | chr6_4:76017746-76017765 | None:intergenic | 25.0% |
| ! | TAGATTCATCAATCAAAACA+TGG | - | chr6_4:76017892-76017911 | None:intergenic | 25.0% |
| ! | TTGATTGATGAATCTATCAT+AGG | + | chr6_4:76017896-76017915 | Msa0997030:intron | 25.0% |
| ! | AAATAGTAGTTTAAGAGTGA+TGG | + | chr6_4:76018136-76018155 | Msa0997030:CDS | 25.0% |
| ! | ATTGTCAAGTTATCTCTTTA+TGG | + | chr6_4:76018747-76018766 | Msa0997030:CDS | 25.0% |
| ! | TTGTCAAGTTATCTCTTTAT+GGG | + | chr6_4:76018748-76018767 | Msa0997030:CDS | 25.0% |
| ! | AATCAATATGGTTGTAAAGA+TGG | - | chr6_4:76018787-76018806 | None:intergenic | 25.0% |
| !! | TTTGAGTTTAACATATTGTC+TGG | - | chr6_4:76018829-76018848 | None:intergenic | 25.0% |
| ! | GAAACTATACTCAATATTTC+AGG | - | chr6_4:76018927-76018946 | None:intergenic | 25.0% |
| !! | ATCAAGTTTGGATTTGAAAT+AGG | + | chr6_4:76018990-76019009 | Msa0997030:CDS | 25.0% |
| !!! | ATTTTGGTTGCTATAATCTT+TGG | + | chr6_4:76019074-76019093 | Msa0997030:CDS | 25.0% |
| ! | CAAATTATTGATGAATCTTC+AGG | + | chr6_4:76019155-76019174 | Msa0997030:CDS | 25.0% |
| !! | TTTTGTGATTCTTAGCTCTT+TGG | + | chr6_4:76017102-76017121 | Msa0997030:CDS | 30.0% |
| !!! | TTCCCACAAGGTTTTATTTT+TGG | + | chr6_4:76017190-76017209 | Msa0997030:CDS | 30.0% |
| GTTCCAAAAATAAAACCTTG+TGG | - | chr6_4:76017196-76017215 | None:intergenic | 30.0% | |
| GTAGAATTATCCCATATACT+TGG | - | chr6_4:76017355-76017374 | None:intergenic | 30.0% | |
| TGACAGATGCATAAATATCT+AGG | + | chr6_4:76017400-76017419 | Msa0997030:intron | 30.0% | |
| !! | ATCTAGGATTTTTACACCTT+AGG | + | chr6_4:76017416-76017435 | Msa0997030:intron | 30.0% |
| ! | AATTCAGGTGTTTCTATGTT+AGG | + | chr6_4:76017587-76017606 | Msa0997030:intron | 30.0% |
| ! | AAAAAACACAACGATTTTGG+GGG | + | chr6_4:76017635-76017654 | Msa0997030:intron | 30.0% |
| ! | GGGGGATTTTTAATAATGTA+AGG | + | chr6_4:76017653-76017672 | Msa0997030:intron | 30.0% |
| AATGCTTATGAAAAACTAGG+TGG | - | chr6_4:76017702-76017721 | None:intergenic | 30.0% | |
| ! | AAGGTATGCTGAGTATTTTA+AGG | + | chr6_4:76017800-76017819 | Msa0997030:intron | 30.0% |
| GAATCTATCATAGGTATCAA+CGG | + | chr6_4:76017905-76017924 | Msa0997030:intron | 30.0% | |
| TCTTAAAGGAATACAAGGTA+AGG | + | chr6_4:76018026-76018045 | Msa0997030:intron | 30.0% | |
| ! | ATATTGTAAGTTCTTTTCCC+TGG | + | chr6_4:76018198-76018217 | Msa0997030:intron | 30.0% |
| AAATCTTGAATATACGACCA+GGG | - | chr6_4:76018218-76018237 | None:intergenic | 30.0% | |
| TAAATCTTGAATATACGACC+AGG | - | chr6_4:76018219-76018238 | None:intergenic | 30.0% | |
| ATTTGTGTTTGAATCCTAAC+TGG | - | chr6_4:76018408-76018427 | None:intergenic | 30.0% | |
| !!! | TTGGATGAGTGAGTTTTATT+TGG | - | chr6_4:76018486-76018505 | None:intergenic | 30.0% |
| ATTTAATTGAGTATGTGTGG+AGG | - | chr6_4:76018526-76018545 | None:intergenic | 30.0% | |
| GCAATTTAATTGAGTATGTG+TGG | - | chr6_4:76018529-76018548 | None:intergenic | 30.0% | |
| CAATTAAACGGTTGAAAGAA+GGG | - | chr6_4:76018716-76018735 | None:intergenic | 30.0% | |
| TGTTCCATCTTCCAATTAAA+CGG | - | chr6_4:76018728-76018747 | None:intergenic | 30.0% | |
| TGTCAAGTTATCTCTTTATG+GGG | + | chr6_4:76018749-76018768 | Msa0997030:CDS | 30.0% | |
| GAACTGCTTTACAATCAATA+TGG | - | chr6_4:76018799-76018818 | None:intergenic | 30.0% | |
| AGTTTAACATATTGTCTGGA+AGG | - | chr6_4:76018825-76018844 | None:intergenic | 30.0% | |
| AAATCCAAACTTGATCAGTT+TGG | - | chr6_4:76018985-76019004 | None:intergenic | 30.0% | |
| !! | TTTTGTGATTCTTAGCTCTT+TGG | + | chr6_4:76017102-76017121 | Msa0997030:CDS | 30.0% |
| !!! | TTCCCACAAGGTTTTATTTT+TGG | + | chr6_4:76017190-76017209 | Msa0997030:CDS | 30.0% |
| GTTCCAAAAATAAAACCTTG+TGG | - | chr6_4:76017196-76017215 | None:intergenic | 30.0% | |
| GTAGAATTATCCCATATACT+TGG | - | chr6_4:76017355-76017374 | None:intergenic | 30.0% | |
| TGACAGATGCATAAATATCT+AGG | + | chr6_4:76017400-76017419 | Msa0997030:intron | 30.0% | |
| !! | ATCTAGGATTTTTACACCTT+AGG | + | chr6_4:76017416-76017435 | Msa0997030:intron | 30.0% |
| ! | AATTCAGGTGTTTCTATGTT+AGG | + | chr6_4:76017587-76017606 | Msa0997030:intron | 30.0% |
| ! | AAAAAACACAACGATTTTGG+GGG | + | chr6_4:76017635-76017654 | Msa0997030:intron | 30.0% |
| ! | GGGGGATTTTTAATAATGTA+AGG | + | chr6_4:76017653-76017672 | Msa0997030:intron | 30.0% |
| AATGCTTATGAAAAACTAGG+TGG | - | chr6_4:76017702-76017721 | None:intergenic | 30.0% | |
| ! | AAGGTATGCTGAGTATTTTA+AGG | + | chr6_4:76017800-76017819 | Msa0997030:intron | 30.0% |
| GAATCTATCATAGGTATCAA+CGG | + | chr6_4:76017905-76017924 | Msa0997030:intron | 30.0% | |
| TCTTAAAGGAATACAAGGTA+AGG | + | chr6_4:76018026-76018045 | Msa0997030:intron | 30.0% | |
| ! | ATATTGTAAGTTCTTTTCCC+TGG | + | chr6_4:76018198-76018217 | Msa0997030:intron | 30.0% |
| AAATCTTGAATATACGACCA+GGG | - | chr6_4:76018218-76018237 | None:intergenic | 30.0% | |
| TAAATCTTGAATATACGACC+AGG | - | chr6_4:76018219-76018238 | None:intergenic | 30.0% | |
| ATTTGTGTTTGAATCCTAAC+TGG | - | chr6_4:76018408-76018427 | None:intergenic | 30.0% | |
| !!! | TTGGATGAGTGAGTTTTATT+TGG | - | chr6_4:76018486-76018505 | None:intergenic | 30.0% |
| ATTTAATTGAGTATGTGTGG+AGG | - | chr6_4:76018526-76018545 | None:intergenic | 30.0% | |
| GCAATTTAATTGAGTATGTG+TGG | - | chr6_4:76018529-76018548 | None:intergenic | 30.0% | |
| CAATTAAACGGTTGAAAGAA+GGG | - | chr6_4:76018716-76018735 | None:intergenic | 30.0% | |
| TGTTCCATCTTCCAATTAAA+CGG | - | chr6_4:76018728-76018747 | None:intergenic | 30.0% | |
| TGTCAAGTTATCTCTTTATG+GGG | + | chr6_4:76018749-76018768 | Msa0997030:CDS | 30.0% | |
| GAACTGCTTTACAATCAATA+TGG | - | chr6_4:76018799-76018818 | None:intergenic | 30.0% | |
| AGTTTAACATATTGTCTGGA+AGG | - | chr6_4:76018825-76018844 | None:intergenic | 30.0% | |
| AAATCCAAACTTGATCAGTT+TGG | - | chr6_4:76018985-76019004 | None:intergenic | 30.0% | |
| ! | ATATTTGGAGTAGTACTACC+TGG | - | chr6_4:76017234-76017253 | None:intergenic | 35.0% |
| ATCTGTCAAAAGAAACTACC+TGG | - | chr6_4:76017388-76017407 | None:intergenic | 35.0% | |
| ! | GGATTTTTACACCTTAGGAT+TGG | + | chr6_4:76017421-76017440 | Msa0997030:intron | 35.0% |
| ! | AGGTGTTTCTATGTTAGGAA+AGG | + | chr6_4:76017592-76017611 | Msa0997030:intron | 35.0% |
| ! | GGTGTTTCTATGTTAGGAAA+GGG | + | chr6_4:76017593-76017612 | Msa0997030:intron | 35.0% |
| ! | GTGTTTCTATGTTAGGAAAG+GGG | + | chr6_4:76017594-76017613 | Msa0997030:intron | 35.0% |
| AAGGTAAAAGACACGAGTAA+TGG | + | chr6_4:76017769-76017788 | Msa0997030:intron | 35.0% | |
| !! | ACGAGTAATGGATTAGACAA+AGG | + | chr6_4:76017781-76017800 | Msa0997030:intron | 35.0% |
| ! | TTAAGGATATGAGTTGACAG+TGG | + | chr6_4:76017817-76017836 | Msa0997030:intron | 35.0% |
| TATTAGGTTATTGTTGCCTG+AGG | + | chr6_4:76017991-76018010 | Msa0997030:CDS | 35.0% | |
| TAGGACTTCAATACAGACTA+AGG | - | chr6_4:76018064-76018083 | None:intergenic | 35.0% | |
| ! | GTAGTTTAAGAGTGATGGAA+TGG | + | chr6_4:76018141-76018160 | Msa0997030:CDS | 35.0% |
| ! | ATGGAAAGCATATGACATGT+TGG | + | chr6_4:76018160-76018179 | Msa0997030:CDS | 35.0% |
| CATGTTGGATGAGTTTACAA+TGG | + | chr6_4:76018175-76018194 | Msa0997030:CDS | 35.0% | |
| ATTACTCTATATCGTACTCC+TGG | + | chr6_4:76018318-76018337 | Msa0997030:intron | 35.0% | |
| ! | AATGGAGAGTTTGGCTTAAA+AGG | + | chr6_4:76018356-76018375 | Msa0997030:intron | 35.0% |
| AACAAAGGAATGTTCCAGTT+AGG | + | chr6_4:76018391-76018410 | Msa0997030:intron | 35.0% | |
| CCAATTAAACGGTTGAAAGA+AGG | - | chr6_4:76018717-76018736 | None:intergenic | 35.0% | |
| CCTTCTTTCAACCGTTTAAT+TGG | + | chr6_4:76018714-76018733 | Msa0997030:CDS | 35.0% | |
| TCAACCGTTTAATTGGAAGA+TGG | + | chr6_4:76018721-76018740 | Msa0997030:CDS | 35.0% | |
| !! | TATTTCAGGTTTCCCATTCA+GGG | - | chr6_4:76018913-76018932 | None:intergenic | 35.0% |
| !! | ATATTTCAGGTTTCCCATTC+AGG | - | chr6_4:76018914-76018933 | None:intergenic | 35.0% |
| GGCATATTTGCTTATTTCCT+AGG | + | chr6_4:76019011-76019030 | Msa0997030:CDS | 35.0% | |
| TACAACTTTGGACCATCAAT+TGG | + | chr6_4:76019045-76019064 | Msa0997030:CDS | 35.0% | |
| CAAAATCAGCATCCAATTGA+TGG | - | chr6_4:76019060-76019079 | None:intergenic | 35.0% | |
| !!! | CATCAATTGGATGCTGATTT+TGG | + | chr6_4:76019058-76019077 | Msa0997030:CDS | 35.0% |
| TTTCACTAGATACCTCTTGT+TGG | - | chr6_4:76019262-76019281 | None:intergenic | 35.0% | |
| TTCACTAGATACCTCTTGTT+CGG | - | chr6_4:76019261-76019280 | None:intergenic | 35.0% | |
| ! | ATATTTGGAGTAGTACTACC+TGG | - | chr6_4:76017234-76017253 | None:intergenic | 35.0% |
| ATCTGTCAAAAGAAACTACC+TGG | - | chr6_4:76017388-76017407 | None:intergenic | 35.0% | |
| ! | GGATTTTTACACCTTAGGAT+TGG | + | chr6_4:76017421-76017440 | Msa0997030:intron | 35.0% |
| ! | AGGTGTTTCTATGTTAGGAA+AGG | + | chr6_4:76017592-76017611 | Msa0997030:intron | 35.0% |
| ! | GGTGTTTCTATGTTAGGAAA+GGG | + | chr6_4:76017593-76017612 | Msa0997030:intron | 35.0% |
| ! | GTGTTTCTATGTTAGGAAAG+GGG | + | chr6_4:76017594-76017613 | Msa0997030:intron | 35.0% |
| AAGGTAAAAGACACGAGTAA+TGG | + | chr6_4:76017769-76017788 | Msa0997030:intron | 35.0% | |
| !! | ACGAGTAATGGATTAGACAA+AGG | + | chr6_4:76017781-76017800 | Msa0997030:intron | 35.0% |
| ! | TTAAGGATATGAGTTGACAG+TGG | + | chr6_4:76017817-76017836 | Msa0997030:intron | 35.0% |
| TATTAGGTTATTGTTGCCTG+AGG | + | chr6_4:76017991-76018010 | Msa0997030:CDS | 35.0% | |
| TAGGACTTCAATACAGACTA+AGG | - | chr6_4:76018064-76018083 | None:intergenic | 35.0% | |
| ! | GTAGTTTAAGAGTGATGGAA+TGG | + | chr6_4:76018141-76018160 | Msa0997030:CDS | 35.0% |
| ! | ATGGAAAGCATATGACATGT+TGG | + | chr6_4:76018160-76018179 | Msa0997030:CDS | 35.0% |
| CATGTTGGATGAGTTTACAA+TGG | + | chr6_4:76018175-76018194 | Msa0997030:CDS | 35.0% | |
| ATTACTCTATATCGTACTCC+TGG | + | chr6_4:76018318-76018337 | Msa0997030:intron | 35.0% | |
| ! | AATGGAGAGTTTGGCTTAAA+AGG | + | chr6_4:76018356-76018375 | Msa0997030:intron | 35.0% |
| AACAAAGGAATGTTCCAGTT+AGG | + | chr6_4:76018391-76018410 | Msa0997030:intron | 35.0% | |
| CCAATTAAACGGTTGAAAGA+AGG | - | chr6_4:76018717-76018736 | None:intergenic | 35.0% | |
| CCTTCTTTCAACCGTTTAAT+TGG | + | chr6_4:76018714-76018733 | Msa0997030:CDS | 35.0% | |
| TCAACCGTTTAATTGGAAGA+TGG | + | chr6_4:76018721-76018740 | Msa0997030:CDS | 35.0% | |
| !! | TATTTCAGGTTTCCCATTCA+GGG | - | chr6_4:76018913-76018932 | None:intergenic | 35.0% |
| !! | ATATTTCAGGTTTCCCATTC+AGG | - | chr6_4:76018914-76018933 | None:intergenic | 35.0% |
| GGCATATTTGCTTATTTCCT+AGG | + | chr6_4:76019011-76019030 | Msa0997030:CDS | 35.0% | |
| TACAACTTTGGACCATCAAT+TGG | + | chr6_4:76019045-76019064 | Msa0997030:CDS | 35.0% | |
| CAAAATCAGCATCCAATTGA+TGG | - | chr6_4:76019060-76019079 | None:intergenic | 35.0% | |
| !!! | CATCAATTGGATGCTGATTT+TGG | + | chr6_4:76019058-76019077 | Msa0997030:CDS | 35.0% |
| TTTCACTAGATACCTCTTGT+TGG | - | chr6_4:76019262-76019281 | None:intergenic | 35.0% | |
| TTCACTAGATACCTCTTGTT+CGG | - | chr6_4:76019261-76019280 | None:intergenic | 35.0% | |
| ! | AACCAAACTAGTTTCCCACA+AGG | + | chr6_4:76017178-76017197 | Msa0997030:CDS | 40.0% |
| AACCTTGTGGGAAACTAGTT+TGG | - | chr6_4:76017183-76017202 | None:intergenic | 40.0% | |
| TCTATCATAGGTATCAACGG+CGG | + | chr6_4:76017908-76017927 | Msa0997030:intron | 40.0% | |
| TTGTCAAGAATCACCAACAG+AGG | + | chr6_4:76017958-76017977 | Msa0997030:CDS | 40.0% | |
| AAGAATCACCAACAGAGGTT+GGG | + | chr6_4:76017963-76017982 | Msa0997030:CDS | 40.0% | |
| ATACATTTCCCAACCTCTGT+TGG | - | chr6_4:76017974-76017993 | None:intergenic | 40.0% | |
| CAGAGGTTGGGAAATGTATT+AGG | + | chr6_4:76017975-76017994 | Msa0997030:CDS | 40.0% | |
| !!! | GGACGCTTTTAAAGTGTGTT+TGG | - | chr6_4:76018505-76018524 | None:intergenic | 40.0% |
| TTTCTAATGCCAACGCATTG+TGG | + | chr6_4:76018637-76018656 | Msa0997030:CDS | 40.0% | |
| !! | GGCTCTGAGCATAACATAAT+AGG | - | chr6_4:76018695-76018714 | None:intergenic | 40.0% |
| !! | TCTTTATGGGGTGTTTTCCT+TGG | + | chr6_4:76018761-76018780 | Msa0997030:CDS | 40.0% |
| TATGGTTGTAAAGATGGCCA+AGG | - | chr6_4:76018781-76018800 | None:intergenic | 40.0% | |
| CAAAACTTACGTGAGCTTTG+CGG | + | chr6_4:76018845-76018864 | Msa0997030:CDS | 40.0% | |
| TATTACGACAAAGCCCTGAA+TGG | + | chr6_4:76018897-76018916 | Msa0997030:CDS | 40.0% | |
| ATTACGACAAAGCCCTGAAT+GGG | + | chr6_4:76018898-76018917 | Msa0997030:CDS | 40.0% | |
| CAAACTTGATCAGTTTGGAC+AGG | - | chr6_4:76018980-76018999 | None:intergenic | 40.0% | |
| CTGTCCAAACTGATCAAGTT+TGG | + | chr6_4:76018978-76018997 | Msa0997030:CDS | 40.0% | |
| TTATTTCCTAGGTTGCCTAG+TGG | + | chr6_4:76019022-76019041 | Msa0997030:CDS | 40.0% | |
| GACGAATGCATAACAAAGAG+CGG | - | chr6_4:76019104-76019123 | None:intergenic | 40.0% | |
| TGACTTTCATTGCCAACATC+TGG | - | chr6_4:76019212-76019231 | None:intergenic | 40.0% | |
| GTATCCAGATTACCAACAAG+AGG | + | chr6_4:76019247-76019266 | Msa0997030:CDS | 40.0% | |
| !! | GATACCTCTTGTTGGTAATC+TGG | - | chr6_4:76019254-76019273 | None:intergenic | 40.0% |
| ! | AACCAAACTAGTTTCCCACA+AGG | + | chr6_4:76017178-76017197 | Msa0997030:CDS | 40.0% |
| AACCTTGTGGGAAACTAGTT+TGG | - | chr6_4:76017183-76017202 | None:intergenic | 40.0% | |
| TCTATCATAGGTATCAACGG+CGG | + | chr6_4:76017908-76017927 | Msa0997030:intron | 40.0% | |
| TTGTCAAGAATCACCAACAG+AGG | + | chr6_4:76017958-76017977 | Msa0997030:CDS | 40.0% | |
| AAGAATCACCAACAGAGGTT+GGG | + | chr6_4:76017963-76017982 | Msa0997030:CDS | 40.0% | |
| ATACATTTCCCAACCTCTGT+TGG | - | chr6_4:76017974-76017993 | None:intergenic | 40.0% | |
| CAGAGGTTGGGAAATGTATT+AGG | + | chr6_4:76017975-76017994 | Msa0997030:CDS | 40.0% | |
| !!! | GGACGCTTTTAAAGTGTGTT+TGG | - | chr6_4:76018505-76018524 | None:intergenic | 40.0% |
| TTTCTAATGCCAACGCATTG+TGG | + | chr6_4:76018637-76018656 | Msa0997030:CDS | 40.0% | |
| !! | GGCTCTGAGCATAACATAAT+AGG | - | chr6_4:76018695-76018714 | None:intergenic | 40.0% |
| !! | TCTTTATGGGGTGTTTTCCT+TGG | + | chr6_4:76018761-76018780 | Msa0997030:CDS | 40.0% |
| TATGGTTGTAAAGATGGCCA+AGG | - | chr6_4:76018781-76018800 | None:intergenic | 40.0% | |
| CAAAACTTACGTGAGCTTTG+CGG | + | chr6_4:76018845-76018864 | Msa0997030:CDS | 40.0% | |
| TATTACGACAAAGCCCTGAA+TGG | + | chr6_4:76018897-76018916 | Msa0997030:CDS | 40.0% | |
| ATTACGACAAAGCCCTGAAT+GGG | + | chr6_4:76018898-76018917 | Msa0997030:CDS | 40.0% | |
| CAAACTTGATCAGTTTGGAC+AGG | - | chr6_4:76018980-76018999 | None:intergenic | 40.0% | |
| CTGTCCAAACTGATCAAGTT+TGG | + | chr6_4:76018978-76018997 | Msa0997030:CDS | 40.0% | |
| TTATTTCCTAGGTTGCCTAG+TGG | + | chr6_4:76019022-76019041 | Msa0997030:CDS | 40.0% | |
| GACGAATGCATAACAAAGAG+CGG | - | chr6_4:76019104-76019123 | None:intergenic | 40.0% | |
| TGACTTTCATTGCCAACATC+TGG | - | chr6_4:76019212-76019231 | None:intergenic | 40.0% | |
| GTATCCAGATTACCAACAAG+AGG | + | chr6_4:76019247-76019266 | Msa0997030:CDS | 40.0% | |
| !! | GATACCTCTTGTTGGTAATC+TGG | - | chr6_4:76019254-76019273 | None:intergenic | 40.0% |
| AACAGCTTCATCAGCTTACC+AGG | + | chr6_4:76017213-76017232 | Msa0997030:CDS | 45.0% | |
| ! | GAAGGTGCAGAGAATGTTAG+TGG | + | chr6_4:76017322-76017341 | Msa0997030:CDS | 45.0% |
| TGGCAGAGGACCAAGTATAT+GGG | + | chr6_4:76017342-76017361 | Msa0997030:CDS | 45.0% | |
| CTTCGGATTGACCAATCCTA+AGG | - | chr6_4:76017435-76017454 | None:intergenic | 45.0% | |
| !! | CTTAGGATTGGTCAATCCGA+AGG | + | chr6_4:76017433-76017452 | Msa0997030:intron | 45.0% |
| CAAGAATCACCAACAGAGGT+TGG | + | chr6_4:76017962-76017981 | Msa0997030:CDS | 45.0% | |
| ATACGCATACGCACATGAGT+AGG | - | chr6_4:76018083-76018102 | None:intergenic | 45.0% | |
| ! | ATTACCAGGAGCACATTACC+AGG | - | chr6_4:76018339-76018358 | None:intergenic | 45.0% |
| ! | TGGTAATGTGCTCCTGGTAA+TGG | + | chr6_4:76018338-76018357 | Msa0997030:intron | 45.0% |
| AAGCCAAACTCTCCATTACC+AGG | - | chr6_4:76018353-76018372 | None:intergenic | 45.0% | |
| ! | AACTAGTCTCCACAATGCGT+TGG | - | chr6_4:76018649-76018668 | None:intergenic | 45.0% |
| AACGCATTGTGGAGACTAGT+TGG | + | chr6_4:76018648-76018667 | Msa0997030:CDS | 45.0% | |
| GTTGCCTAGTGGTACAACTT+TGG | + | chr6_4:76019033-76019052 | Msa0997030:CDS | 45.0% | |
| TGGTCCAAAGTTGTACCACT+AGG | - | chr6_4:76019040-76019059 | None:intergenic | 45.0% | |
| GTCTTCACATTCCCAAGATG+AGG | + | chr6_4:76019121-76019140 | Msa0997030:CDS | 45.0% | |
| ! | ATCTTCAGGTTCTGATCCAG+AGG | + | chr6_4:76019169-76019188 | Msa0997030:CDS | 45.0% |
| GTATCCAGATTCCGAACAAG+AGG | + | chr6_4:76019301-76019320 | Msa0997030:CDS | 45.0% | |
| GATACCTCTTGTTCGGAATC+TGG | - | chr6_4:76019308-76019327 | None:intergenic | 45.0% | |
| CAGTTCAGTTACCATACCAG+AGG | + | chr6_4:76019349-76019368 | Msa0997030:CDS | 45.0% | |
| AACAGCTTCATCAGCTTACC+AGG | + | chr6_4:76017213-76017232 | Msa0997030:CDS | 45.0% | |
| ! | GAAGGTGCAGAGAATGTTAG+TGG | + | chr6_4:76017322-76017341 | Msa0997030:CDS | 45.0% |
| TGGCAGAGGACCAAGTATAT+GGG | + | chr6_4:76017342-76017361 | Msa0997030:CDS | 45.0% | |
| CTTCGGATTGACCAATCCTA+AGG | - | chr6_4:76017435-76017454 | None:intergenic | 45.0% | |
| !! | CTTAGGATTGGTCAATCCGA+AGG | + | chr6_4:76017433-76017452 | Msa0997030:intron | 45.0% |
| CAAGAATCACCAACAGAGGT+TGG | + | chr6_4:76017962-76017981 | Msa0997030:CDS | 45.0% | |
| ATACGCATACGCACATGAGT+AGG | - | chr6_4:76018083-76018102 | None:intergenic | 45.0% | |
| ! | ATTACCAGGAGCACATTACC+AGG | - | chr6_4:76018339-76018358 | None:intergenic | 45.0% |
| ! | TGGTAATGTGCTCCTGGTAA+TGG | + | chr6_4:76018338-76018357 | Msa0997030:intron | 45.0% |
| AAGCCAAACTCTCCATTACC+AGG | - | chr6_4:76018353-76018372 | None:intergenic | 45.0% | |
| ! | AACTAGTCTCCACAATGCGT+TGG | - | chr6_4:76018649-76018668 | None:intergenic | 45.0% |
| AACGCATTGTGGAGACTAGT+TGG | + | chr6_4:76018648-76018667 | Msa0997030:CDS | 45.0% | |
| GTTGCCTAGTGGTACAACTT+TGG | + | chr6_4:76019033-76019052 | Msa0997030:CDS | 45.0% | |
| TGGTCCAAAGTTGTACCACT+AGG | - | chr6_4:76019040-76019059 | None:intergenic | 45.0% | |
| GTCTTCACATTCCCAAGATG+AGG | + | chr6_4:76019121-76019140 | Msa0997030:CDS | 45.0% | |
| ! | ATCTTCAGGTTCTGATCCAG+AGG | + | chr6_4:76019169-76019188 | Msa0997030:CDS | 45.0% |
| GTATCCAGATTCCGAACAAG+AGG | + | chr6_4:76019301-76019320 | Msa0997030:CDS | 45.0% | |
| GATACCTCTTGTTCGGAATC+TGG | - | chr6_4:76019308-76019327 | None:intergenic | 45.0% | |
| CAGTTCAGTTACCATACCAG+AGG | + | chr6_4:76019349-76019368 | Msa0997030:CDS | 45.0% | |
| GCAGAGAATGTTAGTGGCAG+AGG | + | chr6_4:76017328-76017347 | Msa0997030:CDS | 50.0% | |
| GTGGCAGAGGACCAAGTATA+TGG | + | chr6_4:76017341-76017360 | Msa0997030:CDS | 50.0% | |
| CATAGGTATCAACGGCGGTA+AGG | + | chr6_4:76017913-76017932 | Msa0997030:intron | 50.0% | |
| CAACGGCGGTAAGGAGAAAA+TGG | + | chr6_4:76017922-76017941 | Msa0997030:CDS | 50.0% | |
| ! | TACTCCTGGTAATGTGCTCC+TGG | + | chr6_4:76018332-76018351 | Msa0997030:intron | 50.0% |
| !! | GCTCCTGGTAATGGAGAGTT+TGG | + | chr6_4:76018347-76018366 | Msa0997030:intron | 50.0% |
| ! | GGCCTTGTCTCAAGTGTAGT+AGG | + | chr6_4:76018669-76018688 | Msa0997030:CDS | 50.0% |
| GGCCTACTACACTTGAGACA+AGG | - | chr6_4:76018674-76018693 | None:intergenic | 50.0% | |
| GTTGTACCACTAGGCAACCT+AGG | - | chr6_4:76019031-76019050 | None:intergenic | 50.0% | |
| TTCCCAAGATGAGGTCGACA+CGG | + | chr6_4:76019130-76019149 | Msa0997030:CDS | 50.0% | |
| ! | ATCCGTGTCGACCTCATCTT+GGG | - | chr6_4:76019135-76019154 | None:intergenic | 50.0% |
| ! | TCAGGTTCTGATCCAGAGGT+TGG | + | chr6_4:76019173-76019192 | Msa0997030:CDS | 50.0% |
| !! | GATCCAGAGGTTGGTAATGC+TGG | + | chr6_4:76019182-76019201 | Msa0997030:CDS | 50.0% |
| TGACCAGCATTACCAACCTC+TGG | - | chr6_4:76019188-76019207 | None:intergenic | 50.0% | |
| AATGCTGGTCAGCCAGATGT+TGG | + | chr6_4:76019197-76019216 | Msa0997030:CDS | 50.0% | |
| ACGACTAGCAACCTCTGGTA+TGG | - | chr6_4:76019363-76019382 | None:intergenic | 50.0% | |
| ATACCAGAGGTTGCTAGTCG+TGG | + | chr6_4:76019362-76019381 | Msa0997030:CDS | 50.0% | |
| GCTAGTCGTGGAAGTGATCA+AGG | + | chr6_4:76019374-76019393 | Msa0997030:CDS | 50.0% | |
| GCAGAGAATGTTAGTGGCAG+AGG | + | chr6_4:76017328-76017347 | Msa0997030:CDS | 50.0% | |
| GTGGCAGAGGACCAAGTATA+TGG | + | chr6_4:76017341-76017360 | Msa0997030:CDS | 50.0% | |
| CATAGGTATCAACGGCGGTA+AGG | + | chr6_4:76017913-76017932 | Msa0997030:intron | 50.0% | |
| CAACGGCGGTAAGGAGAAAA+TGG | + | chr6_4:76017922-76017941 | Msa0997030:CDS | 50.0% | |
| ! | TACTCCTGGTAATGTGCTCC+TGG | + | chr6_4:76018332-76018351 | Msa0997030:intron | 50.0% |
| !! | GCTCCTGGTAATGGAGAGTT+TGG | + | chr6_4:76018347-76018366 | Msa0997030:intron | 50.0% |
| ! | GGCCTTGTCTCAAGTGTAGT+AGG | + | chr6_4:76018669-76018688 | Msa0997030:CDS | 50.0% |
| GGCCTACTACACTTGAGACA+AGG | - | chr6_4:76018674-76018693 | None:intergenic | 50.0% | |
| GTTGTACCACTAGGCAACCT+AGG | - | chr6_4:76019031-76019050 | None:intergenic | 50.0% | |
| TTCCCAAGATGAGGTCGACA+CGG | + | chr6_4:76019130-76019149 | Msa0997030:CDS | 50.0% | |
| ! | ATCCGTGTCGACCTCATCTT+GGG | - | chr6_4:76019135-76019154 | None:intergenic | 50.0% |
| ! | TCAGGTTCTGATCCAGAGGT+TGG | + | chr6_4:76019173-76019192 | Msa0997030:CDS | 50.0% |
| !! | GATCCAGAGGTTGGTAATGC+TGG | + | chr6_4:76019182-76019201 | Msa0997030:CDS | 50.0% |
| TGACCAGCATTACCAACCTC+TGG | - | chr6_4:76019188-76019207 | None:intergenic | 50.0% | |
| AATGCTGGTCAGCCAGATGT+TGG | + | chr6_4:76019197-76019216 | Msa0997030:CDS | 50.0% | |
| ACGACTAGCAACCTCTGGTA+TGG | - | chr6_4:76019363-76019382 | None:intergenic | 50.0% | |
| ATACCAGAGGTTGCTAGTCG+TGG | + | chr6_4:76019362-76019381 | Msa0997030:CDS | 50.0% | |
| GCTAGTCGTGGAAGTGATCA+AGG | + | chr6_4:76019374-76019393 | Msa0997030:CDS | 50.0% | |
| ! | GATCCGTGTCGACCTCATCT+TGG | - | chr6_4:76019136-76019155 | None:intergenic | 55.0% |
| CTTCCACGACTAGCAACCTC+TGG | - | chr6_4:76019368-76019387 | None:intergenic | 55.0% | |
| ! | GATCCGTGTCGACCTCATCT+TGG | - | chr6_4:76019136-76019155 | None:intergenic | 55.0% |
| CTTCCACGACTAGCAACCTC+TGG | - | chr6_4:76019368-76019387 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 76017067 | 76019448 | 76017067 | ID=Msa0997030;Name=Msa0997030 |
| chr6_4 | mRNA | 76017067 | 76019448 | 76017067 | ID=Msa0997030-mRNA-1;Parent=Msa0997030;Name=Msa0997030-mRNA-1;_AED=0.17;_eAED=0.27;_QI=0|0|0|1|1|1|5|0|425 |
| chr6_4 | exon | 76017067 | 76017234 | 76017067 | ID=Msa0997030-mRNA-1:exon:14265;Parent=Msa0997030-mRNA-1 |
| chr6_4 | exon | 76017319 | 76017388 | 76017319 | ID=Msa0997030-mRNA-1:exon:14266;Parent=Msa0997030-mRNA-1 |
| chr6_4 | exon | 76017918 | 76018042 | 76017918 | ID=Msa0997030-mRNA-1:exon:14267;Parent=Msa0997030-mRNA-1 |
| chr6_4 | exon | 76018134 | 76018202 | 76018134 | ID=Msa0997030-mRNA-1:exon:14268;Parent=Msa0997030-mRNA-1 |
| chr6_4 | exon | 76018603 | 76019448 | 76018603 | ID=Msa0997030-mRNA-1:exon:14269;Parent=Msa0997030-mRNA-1 |
| chr6_4 | CDS | 76017067 | 76017234 | 76017067 | ID=Msa0997030-mRNA-1:cds;Parent=Msa0997030-mRNA-1 |
| chr6_4 | CDS | 76017319 | 76017388 | 76017319 | ID=Msa0997030-mRNA-1:cds;Parent=Msa0997030-mRNA-1 |
| chr6_4 | CDS | 76017918 | 76018042 | 76017918 | ID=Msa0997030-mRNA-1:cds;Parent=Msa0997030-mRNA-1 |
| chr6_4 | CDS | 76018134 | 76018202 | 76018134 | ID=Msa0997030-mRNA-1:cds;Parent=Msa0997030-mRNA-1 |
| chr6_4 | CDS | 76018603 | 76019448 | 76018603 | ID=Msa0997030-mRNA-1:cds;Parent=Msa0997030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
