AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1002790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1002790 MtrunA17_Chr6g0469071 57.784 379 136 4 29 400 255 616 2.26e-142 419
Msa1002790 MtrunA17_Chr1g0153901 58.947 285 112 2 29 308 256 540 5.16e-109 330
Msa1002790 MtrunA17_Chr5g0434431 64.773 176 60 1 229 402 1 176 2.27e-79 242
Msa1002790 MtrunA17_Chr8g0357811 88.991 109 12 0 179 287 1 109 9.78e-67 207
Msa1002790 MtrunA17_Chr2g0325841 35.565 239 146 4 164 399 962 1195 3.12e-42 158
Msa1002790 MtrunA17_Chr2g0325841 42.963 135 50 4 29 158 734 846 3.66e-18 87.0
Msa1002790 MtrunA17_Chr2g0287771 54.717 106 48 0 179 284 1 106 3.75e-39 135
Msa1002790 MtrunA17_Chr1g0174011 67.347 98 30 1 307 402 1 98 3.81e-39 135
Msa1002790 MtrunA17_Chr1g0153911 68.889 90 26 1 315 402 1 90 4.17e-36 127
Msa1002790 MtrunA17_Chr2g0321271 91.667 48 4 0 355 402 1 48 4.93e-23 91.3
Msa1002790 MtrunA17_Chr4g0033251 72.917 48 12 1 355 401 1 48 1.53e-16 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 81 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAATTTGTTTGTTTGTT+TGG 0.205277 6_4:-88985803 None:intergenic
TTACTTGGCACCGTTTCTTA+TGG 0.218079 6_4:+88986320 Msa1002790:CDS
TTCAATTTGTTTGTTTGTTT+GGG 0.218589 6_4:-88985802 None:intergenic
TATGAAACTTAGGATTTATT+AGG 0.242704 6_4:+88987049 Msa1002790:exon
GTTGAGTAGTAATGGCAAAA+TGG 0.284603 6_4:+88985055 None:intergenic
TACTTGGCACCGTTTCTTAT+GGG 0.303383 6_4:+88986321 Msa1002790:CDS
TGAAAGAGAGGCAATATCTA+AGG 0.309941 6_4:+88985943 Msa1002790:CDS
ACTATTCTATTCTACAAGTT+TGG 0.312483 6_4:+88986054 Msa1002790:CDS
ATTAAGAAATTTATGACTTC+CGG 0.313134 6_4:-88985984 None:intergenic
TATGGAGACACTCAAGACTA+TGG 0.329517 6_4:+88985764 Msa1002790:CDS
TTCATACAATTCAAGAAAAC+AGG 0.335100 6_4:-88987032 None:intergenic
GTTTGTATGTAGGATTTAAC+TGG 0.337074 6_4:-88986270 None:intergenic
ACAAACAAATCAAATGTGTT+TGG 0.350566 6_4:+88986192 Msa1002790:CDS
TAAGGACAAGACATGTCTTT+TGG 0.356294 6_4:+88985109 Msa1002790:CDS
TAATGGCAAAATGGGACTTT+AGG 0.358762 6_4:+88985064 None:intergenic
GGTTTGTTGTTATTTCTAGC+TGG 0.359699 6_4:+88987106 Msa1002790:three_prime_UTR
TTGGCAAATGGAGCTCAATA+AGG 0.367041 6_4:+88985128 Msa1002790:CDS
TCTTGAATTGTATGAAACTT+AGG 0.371464 6_4:+88987039 Msa1002790:CDS
ACTTATTGGTTGGCGGGGCT+TGG 0.385528 6_4:+88986027 Msa1002790:CDS
TATCCACAATCAGTTGTGTT+AGG 0.390652 6_4:-88986785 None:intergenic
AATTACTTTGGAAGGTCTTC+AGG 0.392675 6_4:+88985618 Msa1002790:CDS
GATATCTTAACAGAGGCTAT+TGG 0.404368 6_4:+88985540 Msa1002790:CDS
TCATTGTTGTGTCAAGATCT+TGG 0.404397 6_4:-88986490 None:intergenic
ACAACCAATGTATTATCCTT+TGG 0.410346 6_4:-88986452 None:intergenic
AAGAAAATCGCAAGGACGAC+TGG 0.418454 6_4:+88985883 Msa1002790:CDS
GTTTGTTGTTATTTCTAGCT+GGG 0.421292 6_4:+88987107 Msa1002790:three_prime_UTR
TTGAGTAGTAATGGCAAAAT+GGG 0.432173 6_4:+88985056 None:intergenic
TTTGTTTGTTTGGGAGGTAT+CGG 0.435440 6_4:-88985793 None:intergenic
AATTTGTTTGTTTGTTTGGG+AGG 0.440214 6_4:-88985799 None:intergenic
GGTGGTCGTGTCCGTGGTGT+TGG 0.446741 6_4:+88985576 Msa1002790:CDS
GTATGCTTTGCGAAACGATT+GGG 0.447406 6_4:+88987006 Msa1002790:CDS
TTTCTAGCTGGGAGATATGT+TGG 0.453566 6_4:+88987118 Msa1002790:three_prime_UTR
CAATGTTTAATTAGTACTGT+TGG 0.456089 6_4:+88987085 Msa1002790:three_prime_UTR
CTGCTAATATTACTACCTCT+TGG 0.458064 6_4:+88986840 Msa1002790:CDS
AGCAGAGTTCGAACAACAAA+TGG 0.464201 6_4:+88985710 Msa1002790:CDS
GCTACAATAAGCAATTACTT+TGG 0.470922 6_4:+88985606 Msa1002790:CDS
GGTTCGTTGGCTTCGTCCTA+AGG 0.473165 6_4:+88986661 Msa1002790:CDS
ATGAACCTTCTTGTTTGTTG+TGG 0.474107 6_4:+88987238 Msa1002790:three_prime_UTR
TGACATTTATGCTTTGCGTT+GGG 0.484623 6_4:-88985641 None:intergenic
ACGCAACTTAGTTTGTATGT+AGG 0.490479 6_4:-88986280 None:intergenic
GTTAAAATTAGAACATGGTC+CGG 0.496286 6_4:+88985965 Msa1002790:CDS
GAAACTTAGGATTTATTAGG+AGG 0.497449 6_4:+88987052 Msa1002790:exon
ATTTAATTTGGTACTGTACC+AGG 0.504056 6_4:+88987393 Msa1002790:three_prime_UTR
CGTGTCCGTGGTGTTGGAAG+AGG 0.509158 6_4:+88985582 Msa1002790:CDS
CTGACATTTATGCTTTGCGT+TGG 0.511393 6_4:-88985642 None:intergenic
CAACCTAACACAACTGATTG+TGG 0.514100 6_4:+88986782 Msa1002790:CDS
ACTTGGCACCGTTTCTTATG+GGG 0.528987 6_4:+88986322 Msa1002790:CDS
TGTATGCTTTGCGAAACGAT+TGG 0.532235 6_4:+88987005 Msa1002790:CDS
TGTCTTGTCCTTATCTGTGT+CGG 0.533239 6_4:-88985099 None:intergenic
GTTGTGTTAGGAAGCGCAAA+AGG 0.533308 6_4:+88985843 Msa1002790:CDS
TATTACTACCTCTTGGATGA+AGG 0.535487 6_4:+88986847 Msa1002790:CDS
CAATAAGCAATTACTTTGGA+AGG 0.536532 6_4:+88985610 Msa1002790:CDS
ACGGACACGACCACCATGCT+CGG 0.542869 6_4:-88985568 None:intergenic
GGTTAGAACCGACACAGATA+AGG 0.548271 6_4:+88985091 Msa1002790:CDS
AGATCTTGACACAACAATGA+AGG 0.553286 6_4:+88986493 Msa1002790:CDS
ATGGAGACACTCAAGACTAT+GGG 0.554867 6_4:+88985765 Msa1002790:CDS
TTTGCAAATGTAGGACTCGT+TGG 0.555861 6_4:+88985473 Msa1002790:intron
GAGGTTCATCAATTAGCAAA+CGG 0.557640 6_4:+88986627 Msa1002790:CDS
ATTGATCGTCATTTGTCCAA+AGG 0.565798 6_4:+88986436 Msa1002790:CDS
TATACTTACCCCATAAGAAA+CGG 0.568575 6_4:-88986330 None:intergenic
GCAAAATGGGACTTTAGGTG+TGG 0.573466 6_4:+88985069 Msa1002790:CDS
TATGAACAAAGTGTGTTACT+TGG 0.580249 6_4:+88986305 Msa1002790:CDS
TTGTCCAAAGGATAATACAT+TGG 0.585455 6_4:+88986448 Msa1002790:CDS
AACTGGTTCTGTATTCATTG+CGG 0.587743 6_4:-88986253 None:intergenic
CAAAATGGGACTTTAGGTGT+GGG 0.594219 6_4:+88985070 Msa1002790:CDS
AAGATATCTTTACGTCCTTG+TGG 0.596126 6_4:-88985525 None:intergenic
TACATCCACAACAAACAAGA+AGG 0.605162 6_4:-88987243 None:intergenic
TTTACGTGTATAGAGCACAT+TGG 0.609577 6_4:+88986411 Msa1002790:intron
TGTTTGTTTCAATACAGAGA+CGG 0.620395 6_4:-88986176 None:intergenic
GCTATTGGAACATCCGAGCA+TGG 0.623254 6_4:+88985555 Msa1002790:CDS
CACTTTCTGAACATTGTCAG+TGG 0.626212 6_4:-88985907 None:intergenic
GATCTTGGTTAAGTGAACAA+AGG 0.637507 6_4:-88986475 None:intergenic
GAGCATGGTGGTCGTGTCCG+TGG 0.646629 6_4:+88985570 Msa1002790:CDS
CTAAGGTTAAAATTAGAACA+TGG 0.649969 6_4:+88985960 Msa1002790:CDS
TGCAGCACAAGAAAATCGCA+AGG 0.650310 6_4:+88985875 Msa1002790:CDS
AAAGGAACATTTGTACCACA+AGG 0.673901 6_4:+88985510 Msa1002790:CDS
ATGGTATACCTTCATCCAAG+AGG 0.683941 6_4:-88986855 None:intergenic
TTGCATCAACTGATGCGCTG+TGG 0.684847 6_4:-88985733 None:intergenic
ACGTAAAGATATCTTAACAG+AGG 0.699129 6_4:+88985533 Msa1002790:CDS
TAGCACCTCTTCCAACACCA+CGG 0.719203 6_4:-88985587 None:intergenic
ATTGGAACATCCGAGCATGG+TGG 0.721014 6_4:+88985558 Msa1002790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAGTTTTTAACATATTT+TGG - chr6_4:88986014-88986033 None:intergenic 10.0%
!! AAAATATGTTAAAAACTTAT+TGG + chr6_4:88986013-88986032 Msa1002790:CDS 10.0%
!! TAAAAATTAAATTCATTTGT+AGG + chr6_4:88986751-88986770 Msa1002790:intron 10.0%
!! AAATAAGTAAAATAACAATA+AGG - chr6_4:88986926-88986945 None:intergenic 10.0%
!!! AATAAGTTTTTAACATATTT+TGG - chr6_4:88986014-88986033 None:intergenic 10.0%
!! AAAATATGTTAAAAACTTAT+TGG + chr6_4:88986013-88986032 Msa1002790:CDS 10.0%
!! TAAAAATTAAATTCATTTGT+AGG + chr6_4:88986751-88986770 Msa1002790:intron 10.0%
!! AAATAAGTAAAATAACAATA+AGG - chr6_4:88986926-88986945 None:intergenic 10.0%
!!! TCTTTTTAATCTATTTTTTC+TGG + chr6_4:88985428-88985447 Msa1002790:intron 15.0%
!! AAAAATTGAAGCAAAAATTA+AGG + chr6_4:88985677-88985696 Msa1002790:CDS 15.0%
!!! TATTGATTTCAAATTTATTC+AGG + chr6_4:88986145-88986164 Msa1002790:intron 15.0%
!!! ATTTAAAACTCAATTTTGTT+GGG - chr6_4:88986227-88986246 None:intergenic 15.0%
!!! TCTTAATTTGGAAATATATA+TGG - chr6_4:88986890-88986909 None:intergenic 15.0%
!!! ACCTTTTTTTTTTTTAGTTT+TGG + chr6_4:88987156-88987175 Msa1002790:three_prime_UTR 15.0%
!! ACCAAAACTAAAAAAAAAAA+AGG - chr6_4:88987160-88987179 None:intergenic 15.0%
!! AAAAAAAGACAGATTTAATT+TGG + chr6_4:88987381-88987400 Msa1002790:three_prime_UTR 15.0%
!!! TCTTTTTAATCTATTTTTTC+TGG + chr6_4:88985428-88985447 Msa1002790:intron 15.0%
!! AAAAATTGAAGCAAAAATTA+AGG + chr6_4:88985677-88985696 Msa1002790:CDS 15.0%
!!! TATTGATTTCAAATTTATTC+AGG + chr6_4:88986145-88986164 Msa1002790:intron 15.0%
!!! ATTTAAAACTCAATTTTGTT+GGG - chr6_4:88986227-88986246 None:intergenic 15.0%
!!! TCTTAATTTGGAAATATATA+TGG - chr6_4:88986890-88986909 None:intergenic 15.0%
!!! ACCTTTTTTTTTTTTAGTTT+TGG + chr6_4:88987156-88987175 Msa1002790:three_prime_UTR 15.0%
!! ACCAAAACTAAAAAAAAAAA+AGG - chr6_4:88987160-88987179 None:intergenic 15.0%
!! AAAAAAAGACAGATTTAATT+TGG + chr6_4:88987381-88987400 Msa1002790:three_prime_UTR 15.0%
!!! AAAATTCAATTAGTCTTACA+TGG + chr6_4:88985363-88985382 Msa1002790:intron 20.0%
!!! AAATTCAATTAGTCTTACAT+GGG + chr6_4:88985364-88985383 Msa1002790:intron 20.0%
!! AAAAAGATTGTGTACTAAAA+GGG - chr6_4:88985409-88985428 None:intergenic 20.0%
!!! ATTTTTTCTGGATTGTAATT+TGG + chr6_4:88985440-88985459 Msa1002790:intron 20.0%
!!! TTCAATTTGTTTGTTTGTTT+GGG - chr6_4:88985805-88985824 None:intergenic 20.0%
!! ATTAAGAAATTTATGACTTC+CGG - chr6_4:88985987-88986006 None:intergenic 20.0%
!! TATGTTAAAAACTTATTGGT+TGG + chr6_4:88986017-88986036 Msa1002790:CDS 20.0%
!!! GATTTAAAACTCAATTTTGT+TGG - chr6_4:88986228-88986247 None:intergenic 20.0%
!! TATGAAACTTAGGATTTATT+AGG + chr6_4:88987049-88987068 Msa1002790:exon 20.0%
!!! TTTTGTTTGATTTAGAAGTA+TGG + chr6_4:88987312-88987331 Msa1002790:three_prime_UTR 20.0%
!!! TAAATCTGTCTTTTTTTCTT+TGG - chr6_4:88987378-88987397 None:intergenic 20.0%
!!! AAAATTCAATTAGTCTTACA+TGG + chr6_4:88985363-88985382 Msa1002790:intron 20.0%
!!! AAATTCAATTAGTCTTACAT+GGG + chr6_4:88985364-88985383 Msa1002790:intron 20.0%
!! AAAAAGATTGTGTACTAAAA+GGG - chr6_4:88985409-88985428 None:intergenic 20.0%
!!! ATTTTTTCTGGATTGTAATT+TGG + chr6_4:88985440-88985459 Msa1002790:intron 20.0%
!!! TTCAATTTGTTTGTTTGTTT+GGG - chr6_4:88985805-88985824 None:intergenic 20.0%
!! ATTAAGAAATTTATGACTTC+CGG - chr6_4:88985987-88986006 None:intergenic 20.0%
!! TATGTTAAAAACTTATTGGT+TGG + chr6_4:88986017-88986036 Msa1002790:CDS 20.0%
!!! GATTTAAAACTCAATTTTGT+TGG - chr6_4:88986228-88986247 None:intergenic 20.0%
!! TATGAAACTTAGGATTTATT+AGG + chr6_4:88987049-88987068 Msa1002790:exon 20.0%
!!! TTTTGTTTGATTTAGAAGTA+TGG + chr6_4:88987312-88987331 Msa1002790:three_prime_UTR 20.0%
!!! TAAATCTGTCTTTTTTTCTT+TGG - chr6_4:88987378-88987397 None:intergenic 20.0%
! AATATGATCAAAGATGTTGA+TGG - chr6_4:88985179-88985198 None:intergenic 25.0%
! GAAAAAGATTGTGTACTAAA+AGG - chr6_4:88985410-88985429 None:intergenic 25.0%
! TTGGTTGAAAAAACTGAAAA+AGG + chr6_4:88985492-88985511 Msa1002790:CDS 25.0%
! AATTGAAGCAAAAATTAAGG+CGG + chr6_4:88985680-88985699 Msa1002790:CDS 25.0%
! GTTGATGCAAAAATCATTTA+TGG + chr6_4:88985746-88985765 Msa1002790:CDS 25.0%
!! GTTCAATTTGTTTGTTTGTT+TGG - chr6_4:88985806-88985825 None:intergenic 25.0%
! CTAAGGTTAAAATTAGAACA+TGG + chr6_4:88985960-88985979 Msa1002790:CDS 25.0%
! ACTATTCTATTCTACAAGTT+TGG + chr6_4:88986054-88986073 Msa1002790:CDS 25.0%
! ACAAACAAATCAAATGTGTT+TGG + chr6_4:88986192-88986211 Msa1002790:CDS 25.0%
!! ATCAAATGTGTTTGGATTTT+TGG + chr6_4:88986200-88986219 Msa1002790:CDS 25.0%
! TAGCAAACGGTAATAAAAAA+AGG + chr6_4:88986640-88986659 Msa1002790:CDS 25.0%
! ATTAAATTCATTTGTAGGCA+AGG + chr6_4:88986756-88986775 Msa1002790:intron 25.0%
! ATATATATGGTGCAAACATA+TGG - chr6_4:88986877-88986896 None:intergenic 25.0%
! TATGTCTAGCTATCTTAATT+TGG - chr6_4:88986902-88986921 None:intergenic 25.0%
! TAATCTATTGTACAAACTGT+AGG + chr6_4:88986946-88986965 Msa1002790:intron 25.0%
! TTCATACAATTCAAGAAAAC+AGG - chr6_4:88987035-88987054 None:intergenic 25.0%
! TCTTGAATTGTATGAAACTT+AGG + chr6_4:88987039-88987058 Msa1002790:CDS 25.0%
! CAATGTTTAATTAGTACTGT+TGG + chr6_4:88987085-88987104 Msa1002790:three_prime_UTR 25.0%
!! TTGACATATAGACATTTTGA+AGG + chr6_4:88987289-88987308 Msa1002790:three_prime_UTR 25.0%
! AATATGATCAAAGATGTTGA+TGG - chr6_4:88985179-88985198 None:intergenic 25.0%
! GAAAAAGATTGTGTACTAAA+AGG - chr6_4:88985410-88985429 None:intergenic 25.0%
! TTGGTTGAAAAAACTGAAAA+AGG + chr6_4:88985492-88985511 Msa1002790:CDS 25.0%
! AATTGAAGCAAAAATTAAGG+CGG + chr6_4:88985680-88985699 Msa1002790:CDS 25.0%
! GTTGATGCAAAAATCATTTA+TGG + chr6_4:88985746-88985765 Msa1002790:CDS 25.0%
!! GTTCAATTTGTTTGTTTGTT+TGG - chr6_4:88985806-88985825 None:intergenic 25.0%
! CTAAGGTTAAAATTAGAACA+TGG + chr6_4:88985960-88985979 Msa1002790:CDS 25.0%
! ACTATTCTATTCTACAAGTT+TGG + chr6_4:88986054-88986073 Msa1002790:CDS 25.0%
! ACAAACAAATCAAATGTGTT+TGG + chr6_4:88986192-88986211 Msa1002790:CDS 25.0%
!! ATCAAATGTGTTTGGATTTT+TGG + chr6_4:88986200-88986219 Msa1002790:CDS 25.0%
! TAGCAAACGGTAATAAAAAA+AGG + chr6_4:88986640-88986659 Msa1002790:CDS 25.0%
! ATTAAATTCATTTGTAGGCA+AGG + chr6_4:88986756-88986775 Msa1002790:intron 25.0%
! ATATATATGGTGCAAACATA+TGG - chr6_4:88986877-88986896 None:intergenic 25.0%
! TATGTCTAGCTATCTTAATT+TGG - chr6_4:88986902-88986921 None:intergenic 25.0%
! TAATCTATTGTACAAACTGT+AGG + chr6_4:88986946-88986965 Msa1002790:intron 25.0%
! TTCATACAATTCAAGAAAAC+AGG - chr6_4:88987035-88987054 None:intergenic 25.0%
! TCTTGAATTGTATGAAACTT+AGG + chr6_4:88987039-88987058 Msa1002790:CDS 25.0%
! CAATGTTTAATTAGTACTGT+TGG + chr6_4:88987085-88987104 Msa1002790:three_prime_UTR 25.0%
!! TTGACATATAGACATTTTGA+AGG + chr6_4:88987289-88987308 Msa1002790:three_prime_UTR 25.0%
! TATGTGTGTTTTGCAAATGT+AGG + chr6_4:88985464-88985483 Msa1002790:intron 30.0%
ACGTAAAGATATCTTAACAG+AGG + chr6_4:88985533-88985552 Msa1002790:CDS 30.0%
GCTACAATAAGCAATTACTT+TGG + chr6_4:88985606-88985625 Msa1002790:CDS 30.0%
CAATAAGCAATTACTTTGGA+AGG + chr6_4:88985610-88985629 Msa1002790:CDS 30.0%
! AATTTGTTTGTTTGTTTGGG+AGG - chr6_4:88985802-88985821 None:intergenic 30.0%
!!! ACAACAACTTTTTCAGAACA+GGG - chr6_4:88985828-88985847 None:intergenic 30.0%
TCTGAAAAAGTTGTTGTGTT+AGG + chr6_4:88985831-88985850 Msa1002790:CDS 30.0%
!! TATGCATGATTTTGAAAGAG+AGG + chr6_4:88985931-88985950 Msa1002790:CDS 30.0%
GTTAAAATTAGAACATGGTC+CGG + chr6_4:88985965-88985984 Msa1002790:CDS 30.0%
! GTTAAAAACTTATTGGTTGG+CGG + chr6_4:88986020-88986039 Msa1002790:CDS 30.0%
! TTAAAAACTTATTGGTTGGC+GGG + chr6_4:88986021-88986040 Msa1002790:CDS 30.0%
TGTTTGTTTCAATACAGAGA+CGG - chr6_4:88986179-88986198 None:intergenic 30.0%
GTTTGTATGTAGGATTTAAC+TGG - chr6_4:88986273-88986292 None:intergenic 30.0%
! TATGAACAAAGTGTGTTACT+TGG + chr6_4:88986305-88986324 Msa1002790:CDS 30.0%
TATACTTACCCCATAAGAAA+CGG - chr6_4:88986333-88986352 None:intergenic 30.0%
TTGTCCAAAGGATAATACAT+TGG + chr6_4:88986448-88986467 Msa1002790:CDS 30.0%
ACAACCAATGTATTATCCTT+TGG - chr6_4:88986455-88986474 None:intergenic 30.0%
! GTTCTATCTTTTAGTGTGAT+AGG - chr6_4:88986574-88986593 None:intergenic 30.0%
!!! ATTTTTTTAACCTAGTGCTC+TGG + chr6_4:88986605-88986624 Msa1002790:intron 30.0%
GGTAATAAAAAAAGGTTCGT+TGG + chr6_4:88986648-88986667 Msa1002790:CDS 30.0%
GAAACTTAGGATTTATTAGG+AGG + chr6_4:88987052-88987071 Msa1002790:exon 30.0%
!! GTTTGTTGTTATTTCTAGCT+GGG + chr6_4:88987107-88987126 Msa1002790:three_prime_UTR 30.0%
!!! TTTTTTAGTTTTGGTACTGC+TGG + chr6_4:88987165-88987184 Msa1002790:three_prime_UTR 30.0%
!!! TTTTTAGTTTTGGTACTGCT+GGG + chr6_4:88987166-88987185 Msa1002790:three_prime_UTR 30.0%
CAACAACCAAAAAACAAGAA+GGG - chr6_4:88987269-88987288 None:intergenic 30.0%
ACAACAACCAAAAAACAAGA+AGG - chr6_4:88987270-88987289 None:intergenic 30.0%
!!! TCTGTCTTTTTTTCTTTGGA+TGG - chr6_4:88987374-88987393 None:intergenic 30.0%
!! ATTTAATTTGGTACTGTACC+AGG + chr6_4:88987393-88987412 Msa1002790:three_prime_UTR 30.0%
! TATGTGTGTTTTGCAAATGT+AGG + chr6_4:88985464-88985483 Msa1002790:intron 30.0%
ACGTAAAGATATCTTAACAG+AGG + chr6_4:88985533-88985552 Msa1002790:CDS 30.0%
GCTACAATAAGCAATTACTT+TGG + chr6_4:88985606-88985625 Msa1002790:CDS 30.0%
CAATAAGCAATTACTTTGGA+AGG + chr6_4:88985610-88985629 Msa1002790:CDS 30.0%
! AATTTGTTTGTTTGTTTGGG+AGG - chr6_4:88985802-88985821 None:intergenic 30.0%
!!! ACAACAACTTTTTCAGAACA+GGG - chr6_4:88985828-88985847 None:intergenic 30.0%
TCTGAAAAAGTTGTTGTGTT+AGG + chr6_4:88985831-88985850 Msa1002790:CDS 30.0%
!! TATGCATGATTTTGAAAGAG+AGG + chr6_4:88985931-88985950 Msa1002790:CDS 30.0%
GTTAAAATTAGAACATGGTC+CGG + chr6_4:88985965-88985984 Msa1002790:CDS 30.0%
! GTTAAAAACTTATTGGTTGG+CGG + chr6_4:88986020-88986039 Msa1002790:CDS 30.0%
! TTAAAAACTTATTGGTTGGC+GGG + chr6_4:88986021-88986040 Msa1002790:CDS 30.0%
TGTTTGTTTCAATACAGAGA+CGG - chr6_4:88986179-88986198 None:intergenic 30.0%
GTTTGTATGTAGGATTTAAC+TGG - chr6_4:88986273-88986292 None:intergenic 30.0%
! TATGAACAAAGTGTGTTACT+TGG + chr6_4:88986305-88986324 Msa1002790:CDS 30.0%
TATACTTACCCCATAAGAAA+CGG - chr6_4:88986333-88986352 None:intergenic 30.0%
TTGTCCAAAGGATAATACAT+TGG + chr6_4:88986448-88986467 Msa1002790:CDS 30.0%
ACAACCAATGTATTATCCTT+TGG - chr6_4:88986455-88986474 None:intergenic 30.0%
! GTTCTATCTTTTAGTGTGAT+AGG - chr6_4:88986574-88986593 None:intergenic 30.0%
!!! ATTTTTTTAACCTAGTGCTC+TGG + chr6_4:88986605-88986624 Msa1002790:intron 30.0%
GGTAATAAAAAAAGGTTCGT+TGG + chr6_4:88986648-88986667 Msa1002790:CDS 30.0%
GAAACTTAGGATTTATTAGG+AGG + chr6_4:88987052-88987071 Msa1002790:exon 30.0%
!! GTTTGTTGTTATTTCTAGCT+GGG + chr6_4:88987107-88987126 Msa1002790:three_prime_UTR 30.0%
!!! TTTTTTAGTTTTGGTACTGC+TGG + chr6_4:88987165-88987184 Msa1002790:three_prime_UTR 30.0%
!!! TTTTTAGTTTTGGTACTGCT+GGG + chr6_4:88987166-88987185 Msa1002790:three_prime_UTR 30.0%
CAACAACCAAAAAACAAGAA+GGG - chr6_4:88987269-88987288 None:intergenic 30.0%
ACAACAACCAAAAAACAAGA+AGG - chr6_4:88987270-88987289 None:intergenic 30.0%
!!! TCTGTCTTTTTTTCTTTGGA+TGG - chr6_4:88987374-88987393 None:intergenic 30.0%
!! ATTTAATTTGGTACTGTACC+AGG + chr6_4:88987393-88987412 Msa1002790:three_prime_UTR 30.0%
! TAAGGACAAGACATGTCTTT+TGG + chr6_4:88985109-88985128 Msa1002790:CDS 35.0%
! AAGACATGTCTTTTGGCAAA+TGG + chr6_4:88985116-88985135 Msa1002790:CDS 35.0%
! TCAATAAGGTGAGCTTTAGT+AGG + chr6_4:88985142-88985161 Msa1002790:intron 35.0%
! CAATAAGGTGAGCTTTAGTA+GGG + chr6_4:88985143-88985162 Msa1002790:intron 35.0%
AAAGGAACATTTGTACCACA+AGG + chr6_4:88985510-88985529 Msa1002790:CDS 35.0%
AAGATATCTTTACGTCCTTG+TGG - chr6_4:88985528-88985547 None:intergenic 35.0%
GATATCTTAACAGAGGCTAT+TGG + chr6_4:88985540-88985559 Msa1002790:CDS 35.0%
! AATTACTTTGGAAGGTCTTC+AGG + chr6_4:88985618-88985637 Msa1002790:CDS 35.0%
TGACATTTATGCTTTGCGTT+GGG - chr6_4:88985644-88985663 None:intergenic 35.0%
! TTTGTTTGTTTGGGAGGTAT+CGG - chr6_4:88985796-88985815 None:intergenic 35.0%
!!! CACAACAACTTTTTCAGAAC+AGG - chr6_4:88985829-88985848 None:intergenic 35.0%
TGAAAGAGAGGCAATATCTA+AGG + chr6_4:88985943-88985962 Msa1002790:CDS 35.0%
! TAAAAACTTATTGGTTGGCG+GGG + chr6_4:88986022-88986041 Msa1002790:CDS 35.0%
!! AACTGGTTCTGTATTCATTG+CGG - chr6_4:88986256-88986275 None:intergenic 35.0%
!! ACGCAACTTAGTTTGTATGT+AGG - chr6_4:88986283-88986302 None:intergenic 35.0%
TTTACGTGTATAGAGCACAT+TGG + chr6_4:88986411-88986430 Msa1002790:intron 35.0%
ATTGATCGTCATTTGTCCAA+AGG + chr6_4:88986436-88986455 Msa1002790:CDS 35.0%
GATCTTGGTTAAGTGAACAA+AGG - chr6_4:88986478-88986497 None:intergenic 35.0%
TCATTGTTGTGTCAAGATCT+TGG - chr6_4:88986493-88986512 None:intergenic 35.0%
AGATCTTGACACAACAATGA+AGG + chr6_4:88986493-88986512 Msa1002790:CDS 35.0%
GAGGTTCATCAATTAGCAAA+CGG + chr6_4:88986627-88986646 Msa1002790:CDS 35.0%
ATCTTGTCTACACATACCTT+AGG - chr6_4:88986680-88986699 None:intergenic 35.0%
TAAGGTATGTGTAGACAAGA+TGG + chr6_4:88986679-88986698 Msa1002790:intron 35.0%
TATCCACAATCAGTTGTGTT+AGG - chr6_4:88986788-88986807 None:intergenic 35.0%
CTGCTAATATTACTACCTCT+TGG + chr6_4:88986840-88986859 Msa1002790:CDS 35.0%
TATTACTACCTCTTGGATGA+AGG + chr6_4:88986847-88986866 Msa1002790:CDS 35.0%
!! GGTTTGTTGTTATTTCTAGC+TGG + chr6_4:88987106-88987125 Msa1002790:three_prime_UTR 35.0%
! ATGAACCTTCTTGTTTGTTG+TGG + chr6_4:88987238-88987257 Msa1002790:three_prime_UTR 35.0%
TACATCCACAACAAACAAGA+AGG - chr6_4:88987246-88987265 None:intergenic 35.0%
!!! GATGTACCCTTCTTGTTTTT+TGG + chr6_4:88987260-88987279 Msa1002790:three_prime_UTR 35.0%
! TAAGGACAAGACATGTCTTT+TGG + chr6_4:88985109-88985128 Msa1002790:CDS 35.0%
! AAGACATGTCTTTTGGCAAA+TGG + chr6_4:88985116-88985135 Msa1002790:CDS 35.0%
! TCAATAAGGTGAGCTTTAGT+AGG + chr6_4:88985142-88985161 Msa1002790:intron 35.0%
! CAATAAGGTGAGCTTTAGTA+GGG + chr6_4:88985143-88985162 Msa1002790:intron 35.0%
AAAGGAACATTTGTACCACA+AGG + chr6_4:88985510-88985529 Msa1002790:CDS 35.0%
AAGATATCTTTACGTCCTTG+TGG - chr6_4:88985528-88985547 None:intergenic 35.0%
GATATCTTAACAGAGGCTAT+TGG + chr6_4:88985540-88985559 Msa1002790:CDS 35.0%
! AATTACTTTGGAAGGTCTTC+AGG + chr6_4:88985618-88985637 Msa1002790:CDS 35.0%
TGACATTTATGCTTTGCGTT+GGG - chr6_4:88985644-88985663 None:intergenic 35.0%
! TTTGTTTGTTTGGGAGGTAT+CGG - chr6_4:88985796-88985815 None:intergenic 35.0%
!!! CACAACAACTTTTTCAGAAC+AGG - chr6_4:88985829-88985848 None:intergenic 35.0%
TGAAAGAGAGGCAATATCTA+AGG + chr6_4:88985943-88985962 Msa1002790:CDS 35.0%
! TAAAAACTTATTGGTTGGCG+GGG + chr6_4:88986022-88986041 Msa1002790:CDS 35.0%
!! AACTGGTTCTGTATTCATTG+CGG - chr6_4:88986256-88986275 None:intergenic 35.0%
!! ACGCAACTTAGTTTGTATGT+AGG - chr6_4:88986283-88986302 None:intergenic 35.0%
TTTACGTGTATAGAGCACAT+TGG + chr6_4:88986411-88986430 Msa1002790:intron 35.0%
ATTGATCGTCATTTGTCCAA+AGG + chr6_4:88986436-88986455 Msa1002790:CDS 35.0%
GATCTTGGTTAAGTGAACAA+AGG - chr6_4:88986478-88986497 None:intergenic 35.0%
TCATTGTTGTGTCAAGATCT+TGG - chr6_4:88986493-88986512 None:intergenic 35.0%
AGATCTTGACACAACAATGA+AGG + chr6_4:88986493-88986512 Msa1002790:CDS 35.0%
GAGGTTCATCAATTAGCAAA+CGG + chr6_4:88986627-88986646 Msa1002790:CDS 35.0%
ATCTTGTCTACACATACCTT+AGG - chr6_4:88986680-88986699 None:intergenic 35.0%
TAAGGTATGTGTAGACAAGA+TGG + chr6_4:88986679-88986698 Msa1002790:intron 35.0%
TATCCACAATCAGTTGTGTT+AGG - chr6_4:88986788-88986807 None:intergenic 35.0%
CTGCTAATATTACTACCTCT+TGG + chr6_4:88986840-88986859 Msa1002790:CDS 35.0%
TATTACTACCTCTTGGATGA+AGG + chr6_4:88986847-88986866 Msa1002790:CDS 35.0%
!! GGTTTGTTGTTATTTCTAGC+TGG + chr6_4:88987106-88987125 Msa1002790:three_prime_UTR 35.0%
! ATGAACCTTCTTGTTTGTTG+TGG + chr6_4:88987238-88987257 Msa1002790:three_prime_UTR 35.0%
TACATCCACAACAAACAAGA+AGG - chr6_4:88987246-88987265 None:intergenic 35.0%
!!! GATGTACCCTTCTTGTTTTT+TGG + chr6_4:88987260-88987279 Msa1002790:three_prime_UTR 35.0%
CAAAATGGGACTTTAGGTGT+GGG + chr6_4:88985070-88985089 Msa1002790:CDS 40.0%
TGTCTTGTCCTTATCTGTGT+CGG - chr6_4:88985102-88985121 None:intergenic 40.0%
TTGGCAAATGGAGCTCAATA+AGG + chr6_4:88985128-88985147 Msa1002790:CDS 40.0%
TTCCATTTGTCATGACGTGT+CGG - chr6_4:88985211-88985230 None:intergenic 40.0%
! AAGAGAGCACGACAAAAGAA+AGG + chr6_4:88985229-88985248 Msa1002790:intron 40.0%
! AGAGAGCACGACAAAAGAAA+GGG + chr6_4:88985230-88985249 Msa1002790:intron 40.0%
TTTGCAAATGTAGGACTCGT+TGG + chr6_4:88985473-88985492 Msa1002790:intron 40.0%
CTGACATTTATGCTTTGCGT+TGG - chr6_4:88985645-88985664 None:intergenic 40.0%
AGCAGAGTTCGAACAACAAA+TGG + chr6_4:88985710-88985729 Msa1002790:CDS 40.0%
TATGGAGACACTCAAGACTA+TGG + chr6_4:88985764-88985783 Msa1002790:CDS 40.0%
ATGGAGACACTCAAGACTAT+GGG + chr6_4:88985765-88985784 Msa1002790:CDS 40.0%
CACTTTCTGAACATTGTCAG+TGG - chr6_4:88985910-88985929 None:intergenic 40.0%
TTACTTGGCACCGTTTCTTA+TGG + chr6_4:88986320-88986339 Msa1002790:CDS 40.0%
TACTTGGCACCGTTTCTTAT+GGG + chr6_4:88986321-88986340 Msa1002790:CDS 40.0%
! TTTTTAACCTAGTGCTCTGG+AGG + chr6_4:88986608-88986627 Msa1002790:intron 40.0%
CAACCTAACACAACTGATTG+TGG + chr6_4:88986782-88986801 Msa1002790:CDS 40.0%
ATGGTATACCTTCATCCAAG+AGG - chr6_4:88986858-88986877 None:intergenic 40.0%
TGTATGCTTTGCGAAACGAT+TGG + chr6_4:88987005-88987024 Msa1002790:CDS 40.0%
GTATGCTTTGCGAAACGATT+GGG + chr6_4:88987006-88987025 Msa1002790:CDS 40.0%
!! TTTCTAGCTGGGAGATATGT+TGG + chr6_4:88987118-88987137 Msa1002790:three_prime_UTR 40.0%
CAAAATGGGACTTTAGGTGT+GGG + chr6_4:88985070-88985089 Msa1002790:CDS 40.0%
TGTCTTGTCCTTATCTGTGT+CGG - chr6_4:88985102-88985121 None:intergenic 40.0%
TTGGCAAATGGAGCTCAATA+AGG + chr6_4:88985128-88985147 Msa1002790:CDS 40.0%
TTCCATTTGTCATGACGTGT+CGG - chr6_4:88985211-88985230 None:intergenic 40.0%
! AAGAGAGCACGACAAAAGAA+AGG + chr6_4:88985229-88985248 Msa1002790:intron 40.0%
! AGAGAGCACGACAAAAGAAA+GGG + chr6_4:88985230-88985249 Msa1002790:intron 40.0%
TTTGCAAATGTAGGACTCGT+TGG + chr6_4:88985473-88985492 Msa1002790:intron 40.0%
CTGACATTTATGCTTTGCGT+TGG - chr6_4:88985645-88985664 None:intergenic 40.0%
AGCAGAGTTCGAACAACAAA+TGG + chr6_4:88985710-88985729 Msa1002790:CDS 40.0%
TATGGAGACACTCAAGACTA+TGG + chr6_4:88985764-88985783 Msa1002790:CDS 40.0%
ATGGAGACACTCAAGACTAT+GGG + chr6_4:88985765-88985784 Msa1002790:CDS 40.0%
CACTTTCTGAACATTGTCAG+TGG - chr6_4:88985910-88985929 None:intergenic 40.0%
TTACTTGGCACCGTTTCTTA+TGG + chr6_4:88986320-88986339 Msa1002790:CDS 40.0%
TACTTGGCACCGTTTCTTAT+GGG + chr6_4:88986321-88986340 Msa1002790:CDS 40.0%
! TTTTTAACCTAGTGCTCTGG+AGG + chr6_4:88986608-88986627 Msa1002790:intron 40.0%
CAACCTAACACAACTGATTG+TGG + chr6_4:88986782-88986801 Msa1002790:CDS 40.0%
ATGGTATACCTTCATCCAAG+AGG - chr6_4:88986858-88986877 None:intergenic 40.0%
TGTATGCTTTGCGAAACGAT+TGG + chr6_4:88987005-88987024 Msa1002790:CDS 40.0%
GTATGCTTTGCGAAACGATT+GGG + chr6_4:88987006-88987025 Msa1002790:CDS 40.0%
!! TTTCTAGCTGGGAGATATGT+TGG + chr6_4:88987118-88987137 Msa1002790:three_prime_UTR 40.0%
GCAAAATGGGACTTTAGGTG+TGG + chr6_4:88985069-88985088 Msa1002790:CDS 45.0%
GGTTAGAACCGACACAGATA+AGG + chr6_4:88985091-88985110 Msa1002790:CDS 45.0%
! TAAGGTGAGCTTTAGTAGGG+AGG + chr6_4:88985146-88985165 Msa1002790:intron 45.0%
! AAGGTGAGCTTTAGTAGGGA+GGG + chr6_4:88985147-88985166 Msa1002790:intron 45.0%
! GAGAGCACGACAAAAGAAAG+GGG + chr6_4:88985231-88985250 Msa1002790:intron 45.0%
AGAGCACGACAAAAGAAAGG+GGG + chr6_4:88985232-88985251 Msa1002790:intron 45.0%
! GTTGTGTTAGGAAGCGCAAA+AGG + chr6_4:88985843-88985862 Msa1002790:CDS 45.0%
TGCAGCACAAGAAAATCGCA+AGG + chr6_4:88985875-88985894 Msa1002790:CDS 45.0%
AAGAAAATCGCAAGGACGAC+TGG + chr6_4:88985883-88985902 Msa1002790:CDS 45.0%
ACTTGGCACCGTTTCTTATG+GGG + chr6_4:88986322-88986341 Msa1002790:CDS 45.0%
GCAAAATGGGACTTTAGGTG+TGG + chr6_4:88985069-88985088 Msa1002790:CDS 45.0%
GGTTAGAACCGACACAGATA+AGG + chr6_4:88985091-88985110 Msa1002790:CDS 45.0%
! TAAGGTGAGCTTTAGTAGGG+AGG + chr6_4:88985146-88985165 Msa1002790:intron 45.0%
! AAGGTGAGCTTTAGTAGGGA+GGG + chr6_4:88985147-88985166 Msa1002790:intron 45.0%
! GAGAGCACGACAAAAGAAAG+GGG + chr6_4:88985231-88985250 Msa1002790:intron 45.0%
AGAGCACGACAAAAGAAAGG+GGG + chr6_4:88985232-88985251 Msa1002790:intron 45.0%
! GTTGTGTTAGGAAGCGCAAA+AGG + chr6_4:88985843-88985862 Msa1002790:CDS 45.0%
TGCAGCACAAGAAAATCGCA+AGG + chr6_4:88985875-88985894 Msa1002790:CDS 45.0%
AAGAAAATCGCAAGGACGAC+TGG + chr6_4:88985883-88985902 Msa1002790:CDS 45.0%
ACTTGGCACCGTTTCTTATG+GGG + chr6_4:88986322-88986341 Msa1002790:CDS 45.0%
! TGAGCTTTAGTAGGGAGGGA+GGG + chr6_4:88985151-88985170 Msa1002790:intron 50.0%
CATTTGTCATGACGTGTCGG+CGG - chr6_4:88985208-88985227 None:intergenic 50.0%
GCTATTGGAACATCCGAGCA+TGG + chr6_4:88985555-88985574 Msa1002790:CDS 50.0%
ATTGGAACATCCGAGCATGG+TGG + chr6_4:88985558-88985577 Msa1002790:CDS 50.0%
TAGCACCTCTTCCAACACCA+CGG - chr6_4:88985590-88985609 None:intergenic 50.0%
TTGCATCAACTGATGCGCTG+TGG - chr6_4:88985736-88985755 None:intergenic 50.0%
! TGATGAACCTCCAGAGCACT+AGG - chr6_4:88986618-88986637 None:intergenic 50.0%
! TGAGCTTTAGTAGGGAGGGA+GGG + chr6_4:88985151-88985170 Msa1002790:intron 50.0%
CATTTGTCATGACGTGTCGG+CGG - chr6_4:88985208-88985227 None:intergenic 50.0%
GCTATTGGAACATCCGAGCA+TGG + chr6_4:88985555-88985574 Msa1002790:CDS 50.0%
ATTGGAACATCCGAGCATGG+TGG + chr6_4:88985558-88985577 Msa1002790:CDS 50.0%
TAGCACCTCTTCCAACACCA+CGG - chr6_4:88985590-88985609 None:intergenic 50.0%
TTGCATCAACTGATGCGCTG+TGG - chr6_4:88985736-88985755 None:intergenic 50.0%
! TGATGAACCTCCAGAGCACT+AGG - chr6_4:88986618-88986637 None:intergenic 50.0%
! GTGAGCTTTAGTAGGGAGGG+AGG + chr6_4:88985150-88985169 Msa1002790:intron 55.0%
CGCCGACACGTCATGACAAA+TGG + chr6_4:88985206-88985225 Msa1002790:intron 55.0%
! ACTTATTGGTTGGCGGGGCT+TGG + chr6_4:88986027-88986046 Msa1002790:CDS 55.0%
!! GGTTCGTTGGCTTCGTCCTA+AGG + chr6_4:88986661-88986680 Msa1002790:CDS 55.0%
! GTGAGCTTTAGTAGGGAGGG+AGG + chr6_4:88985150-88985169 Msa1002790:intron 55.0%
CGCCGACACGTCATGACAAA+TGG + chr6_4:88985206-88985225 Msa1002790:intron 55.0%
! ACTTATTGGTTGGCGGGGCT+TGG + chr6_4:88986027-88986046 Msa1002790:CDS 55.0%
!! GGTTCGTTGGCTTCGTCCTA+AGG + chr6_4:88986661-88986680 Msa1002790:CDS 55.0%
! TCATGACGTGTCGGCGGAGA+TGG - chr6_4:88985202-88985221 None:intergenic 60.0%
ACGGACACGACCACCATGCT+CGG - chr6_4:88985571-88985590 None:intergenic 60.0%
! CGTGTCCGTGGTGTTGGAAG+AGG + chr6_4:88985582-88985601 Msa1002790:CDS 60.0%
! TCATGACGTGTCGGCGGAGA+TGG - chr6_4:88985202-88985221 None:intergenic 60.0%
ACGGACACGACCACCATGCT+CGG - chr6_4:88985571-88985590 None:intergenic 60.0%
! CGTGTCCGTGGTGTTGGAAG+AGG + chr6_4:88985582-88985601 Msa1002790:CDS 60.0%
GAGCATGGTGGTCGTGTCCG+TGG + chr6_4:88985570-88985589 Msa1002790:CDS 65.0%
GGTGGTCGTGTCCGTGGTGT+TGG + chr6_4:88985576-88985595 Msa1002790:CDS 65.0%
GAGCATGGTGGTCGTGTCCG+TGG + chr6_4:88985570-88985589 Msa1002790:CDS 65.0%
GGTGGTCGTGTCCGTGGTGT+TGG + chr6_4:88985576-88985595 Msa1002790:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 88985066 88987427 88985066 ID=Msa1002790;Name=Msa1002790
chr6_4 mRNA 88985066 88987427 88985066 ID=Msa1002790-mRNA-1;Parent=Msa1002790;Name=Msa1002790-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.66|0.57|0.85|1|1|7|367|402
chr6_4 exon 88985066 88985149 88985066 ID=Msa1002790-mRNA-1:exon:17361;Parent=Msa1002790-mRNA-1
chr6_4 exon 88985486 88986081 88985486 ID=Msa1002790-mRNA-1:exon:17362;Parent=Msa1002790-mRNA-1
chr6_4 exon 88986167 88986343 88986167 ID=Msa1002790-mRNA-1:exon:17363;Parent=Msa1002790-mRNA-1
chr6_4 exon 88986424 88986528 88986424 ID=Msa1002790-mRNA-1:exon:17364;Parent=Msa1002790-mRNA-1
chr6_4 exon 88986620 88986682 88986620 ID=Msa1002790-mRNA-1:exon:17365;Parent=Msa1002790-mRNA-1
chr6_4 exon 88986778 88986868 88986778 ID=Msa1002790-mRNA-1:exon:17366;Parent=Msa1002790-mRNA-1
chr6_4 exon 88986968 88987427 88986968 ID=Msa1002790-mRNA-1:exon:17367;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88985066 88985149 88985066 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88985486 88986081 88985486 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88986167 88986343 88986167 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88986424 88986528 88986424 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88986620 88986682 88986620 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88986778 88986868 88986778 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 CDS 88986968 88987060 88986968 ID=Msa1002790-mRNA-1:cds;Parent=Msa1002790-mRNA-1
chr6_4 three_prime_UTR 88987061 88987427 88987061 ID=Msa1002790-mRNA-1:three_prime_utr;Parent=Msa1002790-mRNA-1
Gene Sequence

>Msa1002790

ATGGCAAAATGGGACTTTAGGTGTGGGTTAGAACCGACACAGATAAGGACAAGACATGTCTTTTGGCAAATGGAGCTCAATAAGGACTCGTTGGTTGAAAAAACTGAAAAAGGAACATTTGTACCACAAGGACGTAAAGATATCTTAACAGAGGCTATTGGAACATCCGAGCATGGTGGTCGTGTCCGTGGTGTTGGAAGAGGTGCTACAATAAGCAATTACTTTGGAAGGTCTTCAGGCCCAACGCAAAGCATAAATGTCAGTGAGATTGAAGCAAAAATTGAAGCAAAAATTAAGGCGGAATGCAAAGCAGAGTTCGAACAACAAATGGCCACAGCGCATCAGTTGATGCAAAAATCATTTATGGAGACACTCAAGACTATGGGCTTATCCGATACCTCCCAAACAAACAAACAAATTGAACCCTGTTCTGAAAAAGTTGTTGTGTTAGGAAGCGCAAAAGGTTCTTGTTCTGCAGCACAAGAAAATCGCAAGGACGACTGGACCACTGACAATGTTCAGAAAGTGATATGCATGATTTTGAAAGAGAGGCAATATCTAAGGTTAAAATTAGAACATGGTCCGGAAGTCATAAATTTCTTAATTGCACCAAAATATGTTAAAAACTTATTGGTTGGCGGGGCTTGGCTTGACTATTCTATTCTACAAGTTTGGTGCACGTGTATGCACCGTCTCTGTATTGAAACAAACAAATCAAATGTGTTTGGATTTTTGGACCCAACAAAATTGAGTTTTAAATCAAAGTCCGCAATGAATACAGAACCAGTTAAATCCTACATACAAACTAAGTTGCGTGATATGAACAAAGTGTGTTACTTGGCACCGTTTCTTATGGGAGCACATTGGAAATTGATCGTCATTTGTCCAAAGGATAATACATTGGTTGTCCTTTGTTCACTTAACCAAGATCTTGACACAACAATGAAGGAAATTGTTTCAGCTGCTCTGGAGGTTCATCAATTAGCAAACGGTAATAAAAAAAGGTTCGTTGGCTTCGTCCTAAGGATGCAACCTAACACAACTGATTGTGGATATTATGTGATGAAGAACATGCTAGACATCGTCTCTGCTAATATTACTACCTCTTGGATGAAGGTATTCAATGATACAACAGCATTAACAGAAGATGAGCTGTATGCTTTGCGAAACGATTGGGCAACCTGTTTTCTTGAATTGTATGAAACTTAG
Protein sequence

>Msa1002790

MAKWDFRCGLEPTQIRTRHVFWQMELNKDSLVEKTEKGTFVPQGRKDILTEAIGTSEHGGRVRGVGRGATISNYFGRSSGPTQSINVSEIEAKIEAKIKAECKAEFEQQMATAHQLMQKSFMETLKTMGLSDTSQTNKQIEPCSEKVVVLGSAKGSCSAAQENRKDDWTTDNVQKVICMILKERQYLRLKLEHGPEVINFLIAPKYVKNLLVGGAWLDYSILQVWCTCMHRLCIETNKSNVFGFLDPTKLSFKSKSAMNTEPVKSYIQTKLRDMNKVCYLAPFLMGAHWKLIVICPKDNTLVVLCSLNQDLDTTMKEIVSAALEVHQLANGNKKRFVGFVLRMQPNTTDCGYYVMKNMLDIVSANITTSWMKVFNDTTALTEDELYALRNDWATCFLELYET*