AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1016930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016930 MtrunA17_Chr7g0232401 96.218 476 16 1 1 476 1 474 0.0 939
Msa1016930 MtrunA17_Chr8g0339631 61.845 477 169 7 1 471 1 470 0.0 577
Msa1016930 MtrunA17_Chr8g0373301 60.127 474 171 6 4 471 7 468 0.0 574
Msa1016930 MtrunA17_Chr8g0339451 60.510 471 172 6 10 472 2 466 0.0 557
Msa1016930 MtrunA17_Chr8g0339461 59.539 477 179 5 1 469 1 471 0.0 548
Msa1016930 MtrunA17_Chr7g0232411 55.672 476 201 4 1 473 1 469 0.0 544
Msa1016930 MtrunA17_Chr7g0232391 55.252 476 203 4 1 473 1 469 0.0 531
Msa1016930 MtrunA17_Chr7g0232331 54.088 477 208 5 1 473 1 470 0.0 525
Msa1016930 MtrunA17_Chr8g0339441 57.796 481 151 8 1 475 1 435 0.0 525
Msa1016930 MtrunA17_Chr7g0232341 53.878 477 209 5 1 473 1 470 0.0 521
Msa1016930 MtrunA17_Chr1g0153451 53.305 469 207 4 1 466 1 460 1.97e-177 506
Msa1016930 MtrunA17_Chr6g0449931 51.553 483 218 5 1 476 1 474 2.78e-169 485
Msa1016930 MtrunA17_Chr8g0336741 51.398 465 215 4 5 466 12 468 6.99e-168 481
Msa1016930 MtrunA17_Chr8g0336731 50.972 463 216 4 14 473 40 494 1.16e-159 461
Msa1016930 MtrunA17_Chr8g0336651 51.681 476 219 4 1 473 1 468 1.53e-159 484
Msa1016930 MtrunA17_Chr8g0336651 54.043 470 203 5 3 466 778 1240 1.01e-158 482
Msa1016930 MtrunA17_Chr8g0336651 51.254 279 96 4 191 465 528 770 5.43e-74 253
Msa1016930 MtrunA17_Chr7g0232311 54.060 468 201 5 1 464 1 458 2.13e-157 454
Msa1016930 MtrunA17_Chr8g0336691 52.991 468 209 4 3 466 916 1376 3.71e-155 475
Msa1016930 MtrunA17_Chr8g0336691 53.518 469 207 4 1 465 8 469 1.86e-151 466
Msa1016930 MtrunA17_Chr8g0336691 50.105 475 200 4 3 474 477 917 1.23e-144 447
Msa1016930 MtrunA17_Chr8g0334851 50.426 470 209 8 1 458 1 458 6.61e-155 449
Msa1016930 MtrunA17_Chr8g0334861 49.487 487 219 11 1 475 1 472 7.65e-153 443
Msa1016930 MtrunA17_Chr7g0275511 46.767 464 236 4 7 466 16 472 1.84e-148 432
Msa1016930 MtrunA17_Chr7g0232351 56.736 386 156 4 1 383 1 378 1.66e-145 421
Msa1016930 MtrunA17_Chr6g0459311 46.541 477 240 8 1 472 8 474 3.79e-145 424
Msa1016930 MtrunA17_Chr8g0361371 47.198 464 229 8 7 462 8 463 5.11e-143 418
Msa1016930 MtrunA17_Chr6g0486251 46.895 467 233 8 1 462 1 457 1.23e-142 417
Msa1016930 MtrunA17_Chr6g0486201 46.895 467 233 8 1 462 1 457 1.23e-142 417
Msa1016930 MtrunA17_Chr8g0335161 46.985 481 234 11 1 472 1 469 1.51e-142 417
Msa1016930 MtrunA17_Chr8g0347281 45.770 461 239 4 7 466 19 469 1.65e-141 414
Msa1016930 MtrunA17_Chr8g0347271 45.553 461 240 4 7 466 20 470 2.50e-140 411
Msa1016930 MtrunA17_Chr8g0339601 59.941 337 123 5 144 472 1 333 5.79e-138 400
Msa1016930 MtrunA17_Chr8g0334831 45.720 479 235 9 1 462 1 471 2.71e-136 401
Msa1016930 MtrunA17_Chr8g0335141 45.720 479 242 9 1 472 4 471 1.61e-135 399
Msa1016930 MtrunA17_Chr8g0370941 38.586 495 259 14 1 464 3 483 1.24e-94 295
Msa1016930 MtrunA17_Chr6g0462551 35.924 476 266 11 17 474 15 469 2.57e-86 273
Msa1016930 MtrunA17_Chr6g0462521 37.093 461 243 11 17 462 15 443 6.38e-86 271
Msa1016930 MtrunA17_Chr3g0079731 35.802 486 277 10 1 463 1 474 7.58e-85 269
Msa1016930 MtrunA17_Chr1g0153461 57.346 211 90 0 258 468 1 211 1.00e-83 257
Msa1016930 MtrunA17_Chr6g0462531 37.339 466 249 10 17 462 15 457 1.72e-83 265
Msa1016930 MtrunA17_Chr5g0403641 35.378 489 258 13 1 470 54 503 3.63e-83 266
Msa1016930 MtrunA17_Chr6g0462571 33.891 478 280 9 13 474 9 466 5.24e-83 264
Msa1016930 MtrunA17_Chr6g0462541 33.264 478 275 8 17 474 15 468 4.39e-81 259
Msa1016930 MtrunA17_Chr6g0449991 42.319 345 165 6 1 338 1 318 5.22e-77 244
Msa1016930 MtrunA17_Chr5g0429711 30.913 482 282 19 3 465 8 457 1.72e-64 215
Msa1016930 MtrunA17_Chr5g0442601 33.539 486 271 22 3 458 401 864 3.89e-64 223
Msa1016930 MtrunA17_Chr5g0442601 32.423 293 168 8 112 400 62 328 7.02e-37 144
Msa1016930 MtrunA17_Chr2g0302991 31.681 464 289 14 6 458 5 451 1.26e-62 210
Msa1016930 MtrunA17_Chr5g0442561 32.919 483 274 20 3 458 2 461 2.35e-62 210
Msa1016930 MtrunA17_Chr5g0442491 32.317 492 281 20 3 465 2 470 4.29e-62 209
Msa1016930 MtrunA17_Chr3g0078841 30.309 485 282 13 6 460 10 468 2.06e-61 207
Msa1016930 MtrunA17_Chr5g0442541 31.743 482 274 16 3 458 2 454 2.93e-61 207
Msa1016930 MtrunA17_Chr5g0442581 32.851 484 277 22 3 458 2 465 1.32e-60 207
Msa1016930 MtrunA17_Chr5g0429681 29.835 486 295 17 1 467 39 497 7.71e-60 204
Msa1016930 MtrunA17_Chr2g0302961 30.105 475 285 17 6 458 5 454 1.03e-59 203
Msa1016930 MtrunA17_Chr5g0442521 29.916 478 298 16 3 458 2 464 2.95e-59 202
Msa1016930 MtrunA17_Chr5g0426431 30.390 487 281 14 6 462 12 470 3.15e-59 202
Msa1016930 MtrunA17_Chr5g0414331 30.957 491 280 13 5 472 12 466 4.81e-58 198
Msa1016930 MtrunA17_Chr5g0448521 30.189 477 290 17 3 458 2 456 8.10e-57 195
Msa1016930 MtrunA17_Chr3g0092641 28.838 482 295 13 6 462 12 470 1.02e-56 195
Msa1016930 MtrunA17_Chr4g0050341 29.630 486 284 17 6 458 19 479 1.07e-54 190
Msa1016930 MtrunA17_Chr5g0442511 30.786 471 277 17 3 458 46 482 2.32e-54 189
Msa1016930 MtrunA17_Chr8g0380531 32.345 371 218 9 111 470 110 458 2.06e-53 186
Msa1016930 MtrunA17_Chr4g0053501 30.278 360 235 7 116 469 115 464 2.21e-53 187
Msa1016930 MtrunA17_Chr6g0464841 31.290 473 279 15 6 465 11 450 4.13e-53 185
Msa1016930 MtrunA17_Chr6g0454341 27.607 489 294 14 6 462 10 470 5.65e-53 185
Msa1016930 MtrunA17_Chr5g0414321 29.079 478 290 12 5 469 10 451 9.69e-53 184
Msa1016930 MtrunA17_Chr6g0453951 28.367 490 293 13 3 460 54 517 2.43e-52 184
Msa1016930 MtrunA17_Chr3g0118691 28.542 480 293 15 6 458 15 471 4.40e-52 183
Msa1016930 MtrunA17_Chr6g0464871 30.335 478 291 13 6 472 23 469 7.30e-52 182
Msa1016930 MtrunA17_Chr6g0454321 27.557 479 289 13 6 453 10 461 8.92e-52 185
Msa1016930 MtrunA17_Chr3g0118671 27.198 489 298 12 1 458 1 462 1.05e-51 182
Msa1016930 MtrunA17_Chr6g0454191 27.181 493 302 12 2 462 6 473 1.42e-51 181
Msa1016930 MtrunA17_Chr6g0454181 27.459 488 298 14 6 462 10 472 1.89e-51 181
Msa1016930 MtrunA17_Chr3g0112771 35.329 334 198 6 127 458 123 440 7.09e-51 179
Msa1016930 MtrunA17_Chr6g0454301 27.664 488 295 13 6 462 263 723 7.24e-51 184
Msa1016930 MtrunA17_Chr6g0454301 35.437 206 116 4 257 462 34 222 4.37e-34 135
Msa1016930 MtrunA17_Chr8g0359821 28.212 397 248 8 86 462 91 470 8.61e-51 179
Msa1016930 MtrunA17_Chr4g0053321 30.751 413 249 11 63 469 98 479 1.05e-50 179
Msa1016930 MtrunA17_Chr6g0464861 30.417 480 273 14 6 465 11 449 1.46e-50 178
Msa1016930 MtrunA17_Chr6g0454401 27.236 492 301 13 3 462 7 473 1.80e-50 179
Msa1016930 MtrunA17_Chr2g0278711 28.131 487 300 13 2 462 7 469 2.07e-50 178
Msa1016930 MtrunA17_Chr6g0454151 29.243 383 233 10 96 460 106 468 2.68e-50 178
Msa1016930 MtrunA17_Chr8g0336331 29.610 385 236 8 96 462 102 469 2.97e-50 178
Msa1016930 MtrunA17_Chr7g0217881 29.589 365 211 9 110 460 120 452 3.04e-50 177
Msa1016930 MtrunA17_Chr8g0366391 30.269 446 254 12 31 458 60 466 3.47e-50 178
Msa1016930 MtrunA17_Chr6g0453961 27.122 483 307 12 6 462 19 482 6.24e-50 177
Msa1016930 MtrunA17_Chr1g0159551 30.097 412 238 11 68 465 80 455 6.94e-50 176
Msa1016930 MtrunA17_Chr3g0118771 27.160 486 296 13 6 460 21 479 9.81e-50 177
Msa1016930 MtrunA17_Chr6g0464921 29.947 374 228 7 107 469 105 455 1.69e-49 175
Msa1016930 MtrunA17_Chr3g0118701 29.539 369 225 8 100 449 110 462 4.04e-49 175
Msa1016930 MtrunA17_Chr3g0079711 48.370 184 84 3 287 463 3 182 6.60e-49 166
Msa1016930 MtrunA17_Chr3g0098111 28.163 490 309 13 5 474 8 474 7.65e-49 174
Msa1016930 MtrunA17_Chr5g0426401 35.986 289 157 7 172 450 20 290 1.05e-48 169
Msa1016930 MtrunA17_Chr7g0265141 32.703 370 195 11 127 465 134 480 1.06e-48 174
Msa1016930 MtrunA17_Chr1g0173121 36.949 295 162 7 181 465 178 458 1.08e-48 173
Msa1016930 MtrunA17_Chr6g0454331 27.902 491 290 15 6 460 7 469 1.38e-48 174
Msa1016930 MtrunA17_Chr6g0454201 29.508 366 224 8 110 458 121 469 1.85e-48 173
Msa1016930 MtrunA17_Chr6g0454141 26.923 494 299 15 3 462 7 472 5.50e-48 172
Msa1016930 MtrunA17_Chr6g0454211 29.199 387 237 9 96 462 390 759 8.03e-48 176
Msa1016930 MtrunA17_Chr6g0454211 25.532 282 139 10 124 383 4 236 6.96e-18 86.7
Msa1016930 MtrunA17_Chr5g0440421 30.995 442 250 14 55 465 72 489 9.02e-48 171
Msa1016930 MtrunA17_Chr6g0464881 26.708 483 296 11 6 469 11 454 9.49e-48 171
Msa1016930 MtrunA17_Chr6g0454261 27.917 480 278 17 3 445 7 455 1.13e-47 171
Msa1016930 MtrunA17_Chr4g0044511 35.862 290 159 6 182 458 218 493 1.28e-47 171
Msa1016930 MtrunA17_Chr7g0249981 30.518 367 210 7 115 465 125 462 3.70e-47 170
Msa1016930 MtrunA17_Chr3g0118711 27.292 480 299 15 6 458 13 469 5.99e-47 169
Msa1016930 MtrunA17_Chr7g0265101 29.435 496 294 17 5 465 8 482 7.27e-47 169
Msa1016930 MtrunA17_Chr7g0218811 29.512 410 248 12 70 467 67 447 7.86e-47 168
Msa1016930 MtrunA17_Chr6g0454291 28.721 383 236 9 96 458 100 465 9.64e-47 168
Msa1016930 MtrunA17_Chr6g0452771 29.199 387 237 9 96 462 103 472 1.08e-46 168
Msa1016930 MtrunA17_Chr6g0454131 28.871 381 231 9 98 458 107 467 1.40e-46 168
Msa1016930 MtrunA17_Chr7g0218831 30.058 346 210 10 124 465 118 435 1.51e-46 167
Msa1016930 MtrunA17_Chr3g0112761 29.032 465 300 11 2 462 4 442 3.77e-46 166
Msa1016930 MtrunA17_Chr8g0361411 31.557 488 254 17 2 458 4 442 4.49e-46 166
Msa1016930 MtrunA17_Chr5g0423981 26.216 473 288 13 6 462 10 437 5.14e-46 166
Msa1016930 MtrunA17_Chr7g0265051 29.259 499 289 19 5 465 8 480 5.89e-46 167
Msa1016930 MtrunA17_Chr5g0420801 27.536 483 310 14 6 474 7 463 7.46e-46 166
Msa1016930 MtrunA17_Chr5g0419761 34.483 377 211 14 108 462 116 478 7.81e-46 166
Msa1016930 MtrunA17_Chr7g0218791 29.526 464 284 13 6 458 5 436 8.01e-46 165
Msa1016930 MtrunA17_Chr1g0207981 29.781 366 233 9 112 469 123 472 9.92e-46 166
Msa1016930 MtrunA17_Chr1g0207951 28.684 380 236 8 106 474 220 575 1.42e-45 170
Msa1016930 MtrunA17_Chr1g0207951 29.551 379 232 10 106 473 758 1112 4.66e-41 157
Msa1016930 MtrunA17_Chr8g0382021 42.180 211 110 4 261 465 280 484 1.46e-45 166
Msa1016930 MtrunA17_Chr6g0454121 27.110 391 251 8 85 458 94 467 2.23e-45 165
Msa1016930 MtrunA17_Chr1g0179901 28.306 484 301 16 5 458 15 482 2.25e-45 165
Msa1016930 MtrunA17_Chr8g0369341 29.175 497 294 14 6 474 7 473 6.73e-45 163
Msa1016930 MtrunA17_Chr4g0072761 28.755 466 286 12 5 460 14 443 6.85e-45 163
Msa1016930 MtrunA17_Chr7g0249931 26.804 485 301 14 2 469 36 483 7.05e-45 163
Msa1016930 MtrunA17_Chr1g0207971 30.400 375 219 10 106 465 102 449 1.17e-44 162
Msa1016930 MtrunA17_Chr4g0032331 29.372 446 271 12 29 462 29 442 1.77e-44 162
Msa1016930 MtrunA17_Chr7g0243781 33.994 353 180 13 149 475 156 481 2.00e-44 162
Msa1016930 MtrunA17_Chr3g0118661 26.489 487 293 13 6 458 13 468 2.30e-44 162
Msa1016930 MtrunA17_Chr2g0329111 30.228 483 286 19 15 465 12 475 2.87e-44 162
Msa1016930 MtrunA17_Chr7g0243871 36.335 322 160 10 171 471 177 474 3.12e-44 162
Msa1016930 MtrunA17_Chr8g0337381 58.537 123 49 1 343 465 1 121 3.77e-44 151
Msa1016930 MtrunA17_Chr5g0393591 30.270 370 204 12 106 470 116 436 4.23e-44 160
Msa1016930 MtrunA17_Chr8g0374971 36.996 273 140 8 208 458 207 469 4.41e-44 161
Msa1016930 MtrunA17_Chr8g0334841 52.000 150 64 3 172 318 1 145 4.68e-44 152
Msa1016930 MtrunA17_Chr6g0463861 35.354 297 153 10 184 458 183 462 4.83e-44 161
Msa1016930 MtrunA17_Chr3g0118721 34.510 255 143 6 212 458 40 278 5.19e-44 156
Msa1016930 MtrunA17_Chr7g0218821 32.286 350 201 11 124 467 129 448 6.50e-44 160
Msa1016930 MtrunA17_Chr7g0265151 36.900 271 137 6 210 458 214 472 8.29e-44 160
Msa1016930 MtrunA17_Chr5g0431441 28.926 484 289 15 6 469 18 466 9.32e-44 160
Msa1016930 MtrunA17_Chr4g0014061 34.386 285 156 7 206 471 202 474 1.25e-43 160
Msa1016930 MtrunA17_Chr4g0066151 36.803 269 146 8 208 458 206 468 1.55e-43 160
Msa1016930 MtrunA17_Chr7g0243801 32.895 380 213 14 115 471 118 478 1.67e-43 160
Msa1016930 MtrunA17_Chr1g0207931 34.783 276 163 5 205 474 238 502 1.83e-43 160
Msa1016930 MtrunA17_Chr6g0454271 31.707 287 171 6 182 460 8 277 2.70e-43 154
Msa1016930 MtrunA17_Chr7g0218841 30.172 348 208 12 124 465 118 436 3.04e-43 158
Msa1016930 MtrunA17_Chr8g0365811 28.340 494 309 17 5 474 494 966 3.07e-43 163
Msa1016930 MtrunA17_Chr8g0365811 36.546 249 145 6 197 439 204 445 2.13e-41 158
Msa1016930 MtrunA17_Chr6g0454361 26.419 458 281 12 35 460 38 471 3.47e-43 159
Msa1016930 MtrunA17_Chr5g0401721 29.121 364 234 11 114 467 119 468 5.42e-43 158
Msa1016930 MtrunA17_Chr4g0066221 34.812 293 160 9 184 458 190 469 5.42e-43 158
Msa1016930 MtrunA17_Chr7g0243681 30.809 383 216 10 115 471 122 481 5.61e-43 158
Msa1016930 MtrunA17_Chr1g0207861 31.183 372 227 10 106 465 110 464 8.19e-43 158
Msa1016930 MtrunA17_Chr4g0066261 35.448 268 150 7 208 458 209 470 1.38e-42 157
Msa1016930 MtrunA17_Chr7g0275681 31.414 382 211 11 107 462 117 473 1.50e-42 157
Msa1016930 MtrunA17_Chr2g0307961 31.059 425 247 14 54 458 59 457 2.12e-42 156
Msa1016930 MtrunA17_Chr4g0011051 26.587 504 299 17 5 465 8 483 2.31e-42 157
Msa1016930 MtrunA17_Chr4g0044481 36.475 244 130 5 172 406 170 397 2.38e-42 155
Msa1016930 MtrunA17_Chr4g0066131 36.014 286 159 10 208 475 201 480 3.06e-42 156
Msa1016930 MtrunA17_Chr8g0374901 35.495 293 158 10 184 458 188 467 4.59e-42 156
Msa1016930 MtrunA17_Chr4g0042891 29.477 363 230 9 126 476 124 472 4.73e-42 155
Msa1016930 MtrunA17_Chr8g0377921 29.012 486 289 14 6 465 4 459 4.84e-42 155
Msa1016930 MtrunA17_Chr4g0044521 35.172 290 154 9 184 458 185 455 5.52e-42 155
Msa1016930 MtrunA17_Chr7g0250001 28.457 376 238 7 108 474 99 452 6.95e-42 155
Msa1016930 MtrunA17_Chr7g0218311 37.269 271 140 9 208 458 212 472 8.74e-42 155
Msa1016930 MtrunA17_Chr8g0374941 36.431 269 147 9 208 458 1144 1406 8.79e-42 159
Msa1016930 MtrunA17_Chr8g0374941 35.316 269 142 8 208 454 206 464 9.88e-40 153
Msa1016930 MtrunA17_Chr8g0374941 36.466 266 137 8 208 451 671 926 1.05e-37 147
Msa1016930 MtrunA17_Chr5g0419771 32.246 276 159 6 208 465 243 508 2.06e-41 154
Msa1016930 MtrunA17_Chr7g0243771 32.105 380 216 14 115 471 117 477 2.41e-41 154
Msa1016930 MtrunA17_Chr3g0121991 28.041 485 320 13 1 469 74 545 3.19e-41 154
Msa1016930 MtrunA17_Chr7g0249961 38.140 215 115 3 259 473 67 263 3.40e-41 148
Msa1016930 MtrunA17_Chr6g0454351 25.820 488 287 15 3 458 9 453 3.53e-41 153
Msa1016930 MtrunA17_Chr4g0066201 34.831 267 150 7 208 458 205 463 3.72e-41 153
Msa1016930 MtrunA17_Chr1g0161351 30.000 370 224 10 111 465 144 493 4.83e-41 153
Msa1016930 MtrunA17_Chr5g0428081 36.842 266 145 9 210 458 209 468 2.06e-40 151
Msa1016930 MtrunA17_Chr4g0066171 36.226 265 145 10 210 458 209 465 4.35e-40 150
Msa1016930 MtrunA17_Chr7g0235051 34.259 324 176 12 158 458 133 442 4.40e-40 150
Msa1016930 MtrunA17_Chr7g0265041 36.996 273 140 8 210 462 221 481 4.51e-40 150
Msa1016930 MtrunA17_Chr4g0066281 36.981 265 143 11 210 458 199 455 5.27e-40 150
Msa1016930 MtrunA17_Chr2g0294941 39.423 208 109 6 259 455 164 365 1.07e-39 147
Msa1016930 MtrunA17_Chr8g0355011 28.610 367 198 8 105 460 39 352 1.20e-39 147
Msa1016930 MtrunA17_Chr4g0044501 32.119 302 174 8 172 458 179 464 1.76e-39 149
Msa1016930 MtrunA17_Chr6g0463851 38.496 226 121 6 259 472 266 485 2.12e-39 149
Msa1016930 MtrunA17_Chr8g0377941 36.434 258 138 8 212 465 222 457 2.65e-39 148
Msa1016930 MtrunA17_Chr8g0355221 31.347 386 216 15 115 472 125 489 3.20e-39 148
Msa1016930 MtrunA17_Chr8g0367221 37.273 220 128 1 251 470 1536 1745 3.25e-39 152
Msa1016930 MtrunA17_Chr8g0367221 31.387 274 170 6 189 459 986 1244 2.31e-34 137
Msa1016930 MtrunA17_Chr8g0367221 36.275 204 118 3 253 455 261 453 1.11e-33 135
Msa1016930 MtrunA17_Chr4g0042931 28.125 480 298 15 3 462 4 456 5.70e-39 147
Msa1016930 MtrunA17_Chr8g0350881 34.572 269 152 9 208 458 207 469 1.21e-38 146
Msa1016930 MtrunA17_Chr4g0072771 26.068 468 299 13 3 458 22 454 1.61e-38 145
Msa1016930 MtrunA17_Chr7g0243631 32.722 327 173 10 172 471 182 488 2.00e-38 146
Msa1016930 MtrunA17_Chr7g0243951 35.357 280 152 7 210 471 217 485 2.88e-38 145
Msa1016930 MtrunA17_Chr7g0243711 40.000 225 111 5 259 471 106 318 3.53e-38 142
Msa1016930 MtrunA17_Chr5g0412111 29.178 353 216 10 120 458 118 450 6.76e-38 144
Msa1016930 MtrunA17_Chr3g0118751 24.593 492 282 12 1 460 1 435 8.50e-38 143
Msa1016930 MtrunA17_Chr4g0060511 34.397 282 153 7 210 471 220 489 8.89e-38 144
Msa1016930 MtrunA17_Chr7g0243931 27.921 505 298 18 5 471 16 492 1.20e-37 144
Msa1016930 MtrunA17_Chr5g0412101 30.857 350 200 10 120 453 124 447 1.36e-37 143
Msa1016930 MtrunA17_Chr1g0165701 31.266 387 212 15 115 472 125 486 2.66e-37 143
Msa1016930 MtrunA17_Chr6g0454221 34.951 206 117 4 257 462 35 223 2.95e-37 138
Msa1016930 MtrunA17_Chr3g0122001 27.893 484 315 14 1 465 1 469 3.74e-37 145
Msa1016930 MtrunA17_Chr3g0122001 26.884 491 310 13 1 465 481 948 1.00e-36 144
Msa1016930 MtrunA17_Chr2g0294931 41.232 211 107 6 259 458 266 470 4.03e-37 142
Msa1016930 MtrunA17_Chr5g0416741 30.287 383 220 15 115 471 124 485 1.53e-36 140
Msa1016930 MtrunA17_Chr8g0339611 62.308 130 47 1 1 130 1 128 1.69e-36 131
Msa1016930 MtrunA17_Chr2g0294921 35.075 268 151 9 208 458 358 619 2.35e-36 142
Msa1016930 MtrunA17_Chr7g0241781 37.052 251 121 7 208 450 189 410 2.43e-36 139
Msa1016930 MtrunA17_Chr6g0454171 30.769 273 143 9 198 460 64 300 2.45e-36 136
Msa1016930 MtrunA17_Chr6g0463891 29.659 381 226 10 115 471 124 486 2.49e-36 140
Msa1016930 MtrunA17_Chr5g0448551 30.861 337 202 11 115 441 110 425 5.16e-36 139
Msa1016930 MtrunA17_Chr8g0374931 39.810 211 110 6 259 458 266 470 5.20e-36 139
Msa1016930 MtrunA17_Chr7g0243861 36.170 282 148 7 210 471 220 489 1.10e-35 138
Msa1016930 MtrunA17_Chr2g0278721 28.448 464 285 15 3 444 514 952 3.28e-35 139
Msa1016930 MtrunA17_Chr2g0278721 33.486 218 130 2 228 444 238 441 4.54e-29 121
Msa1016930 MtrunA17_Chr1g0207831 25.963 493 311 15 5 474 7 468 3.47e-35 136
Msa1016930 MtrunA17_Chr7g0243761 34.545 275 132 10 210 471 217 456 5.22e-35 136
Msa1016930 MtrunA17_Chr5g0410941 34.815 270 145 10 210 458 219 478 6.59e-35 136
Msa1016930 MtrunA17_Chr5g0412131 30.086 349 203 9 120 453 124 446 3.20e-34 134
Msa1016930 MtrunA17_Chr7g0243611 38.164 207 111 4 207 406 75 271 4.02e-34 130
Msa1016930 MtrunA17_Chr6g0482061 26.316 361 243 8 125 476 137 483 6.78e-34 133
Msa1016930 MtrunA17_Chr5g0401851 28.162 419 254 15 76 471 91 485 8.34e-34 133
Msa1016930 MtrunA17_Chr8g0336321 42.623 183 93 4 261 443 269 439 1.91e-33 131
Msa1016930 MtrunA17_Chr7g0265111 33.333 270 148 7 210 458 246 504 4.65e-33 131
Msa1016930 MtrunA17_Chr5g0431361 25.470 479 309 14 6 471 12 455 4.70e-33 130
Msa1016930 MtrunA17_Chr5g0427571 38.967 213 107 6 237 449 88 277 4.84e-33 127
Msa1016930 MtrunA17_Chr8g0336251 42.077 183 94 4 261 443 269 439 5.59e-33 130
Msa1016930 MtrunA17_Chr6g0454251 26.877 413 250 13 3 384 4 395 1.59e-32 127
Msa1016930 MtrunA17_Chr5g0409591 30.258 271 160 7 210 454 212 479 3.84e-32 128
Msa1016930 MtrunA17_Chr5g0431421 25.470 479 294 13 6 465 10 444 4.75e-32 127
Msa1016930 MtrunA17_Chr7g0243851 37.826 230 109 7 259 471 232 444 7.16e-32 127
Msa1016930 MtrunA17_Chr7g0241801 36.019 211 110 5 234 444 219 404 1.04e-31 126
Msa1016930 MtrunA17_Chr7g0243911 36.364 209 113 4 256 454 17 215 2.05e-31 120
Msa1016930 MtrunA17_Chr5g0431401 24.426 479 299 13 6 465 10 444 3.69e-31 125
Msa1016930 MtrunA17_Chr4g0069611 32.653 245 147 5 203 444 207 436 6.94e-31 124
Msa1016930 MtrunA17_Chr3g0106231 25.159 473 298 16 6 465 18 447 7.32e-31 124
Msa1016930 MtrunA17_Chr7g0243811 34.426 244 134 8 172 408 153 377 1.21e-30 122
Msa1016930 MtrunA17_Chr4g0029151 37.306 193 109 3 262 450 264 448 1.57e-30 123
Msa1016930 MtrunA17_Chr6g0466831 37.158 183 99 3 263 444 272 439 3.37e-30 122
Msa1016930 MtrunA17_Chr3g0106251 31.541 279 163 7 199 471 40 296 7.09e-30 119
Msa1016930 MtrunA17_Chr5g0432731 29.964 277 166 8 189 458 30 285 7.14e-30 118
Msa1016930 MtrunA17_Chr1g0196851 38.342 193 107 4 262 450 296 480 7.77e-30 122
Msa1016930 MtrunA17_Chr4g0029131 35.233 193 113 3 262 450 256 440 5.08e-29 120
Msa1016930 MtrunA17_Chr3g0092031 34.973 183 103 3 263 444 6 173 9.38e-29 112
Msa1016930 MtrunA17_Chr5g0431371 24.580 476 314 12 6 471 10 450 1.13e-28 117
Msa1016930 MtrunA17_Chr2g0278741 31.837 245 149 5 203 444 294 523 1.82e-28 118
Msa1016930 MtrunA17_Chr4g0040691 30.682 264 152 7 187 446 199 435 2.84e-28 117
Msa1016930 MtrunA17_Chr5g0416821 29.539 369 211 15 124 471 135 475 3.29e-28 117
Msa1016930 MtrunA17_Chr6g0466841 36.066 183 101 3 263 444 272 439 4.18e-28 116
Msa1016930 MtrunA17_Chr4g0039881 31.474 251 150 6 199 444 180 413 1.29e-27 114
Msa1016930 MtrunA17_Chr4g0066141 40.120 167 88 3 321 475 191 357 1.74e-27 113
Msa1016930 MtrunA17_Chr2g0283041 31.186 295 166 10 154 436 151 420 1.97e-27 114
Msa1016930 MtrunA17_Chr6g0464091 31.020 245 151 5 203 444 217 446 4.38e-27 113
Msa1016930 MtrunA17_Chr2g0302851 34.000 200 115 4 246 444 254 437 5.57e-27 113
Msa1016930 MtrunA17_Chr6g0454371 33.146 178 102 4 283 460 1 161 4.31e-26 104
Msa1016930 MtrunA17_Chr8g0357361 37.838 148 78 2 259 406 116 249 4.40e-26 107
Msa1016930 MtrunA17_Chr6g0454231 27.843 255 129 5 208 459 5 207 4.47e-26 110
Msa1016930 MtrunA17_Chr8g0336261 36.000 150 79 4 283 432 1 133 5.67e-26 102
Msa1016930 MtrunA17_Chr7g0231631 32.857 280 143 11 210 471 9 261 1.59e-25 105
Msa1016930 MtrunA17_Chr4g0040711 28.897 263 158 6 187 446 199 435 2.38e-25 108
Msa1016930 MtrunA17_Chr5g0442501 28.882 322 196 12 3 309 2 305 7.28e-25 104
Msa1016930 MtrunA17_Chr3g0079721 28.523 298 186 10 1 281 1 288 8.71e-25 103
Msa1016930 MtrunA17_Chr5g0431431 29.044 272 155 8 172 437 116 355 1.36e-23 102
Msa1016930 MtrunA17_Chr6g0449971 54.217 83 38 0 393 475 1 83 8.27e-23 92.4
Msa1016930 MtrunA17_Chr6g0469961 33.529 170 98 4 142 303 2 164 1.25e-21 91.7
Msa1016930 MtrunA17_Chr2g0319791 34.135 208 116 6 234 439 237 425 9.61e-21 94.7
Msa1016930 MtrunA17_Chr1g0207881 34.532 139 88 2 338 474 252 389 2.62e-20 92.8
Msa1016930 MtrunA17_Chr2g0319761 31.321 265 144 8 179 439 195 425 1.14e-19 91.3
Msa1016930 MtrunA17_Chr2g0321331 35.294 170 82 5 270 439 93 234 5.38e-19 87.0
Msa1016930 MtrunA17_Chr2g0319751 32.773 238 131 8 234 464 714 929 4.45e-18 87.4
Msa1016930 MtrunA17_Chr2g0319751 26.923 234 159 6 214 439 172 401 2.31e-13 72.8
Msa1016930 MtrunA17_Chr5g0442551 28.030 264 154 8 100 353 57 294 1.83e-17 82.8
Msa1016930 MtrunA17_Chr7g0243731 47.222 72 38 0 341 412 6 77 7.07e-17 75.5
Msa1016930 MtrunA17_Chr2g0319731 30.802 237 142 7 206 439 225 442 1.71e-16 81.6
Msa1016930 MtrunA17_Chr7g0250021 22.910 323 224 8 2 313 8 316 1.89e-16 80.5
Msa1016930 MtrunA17_Chr2g0319801 25.828 453 286 16 4 439 6 425 1.11e-15 79.3
Msa1016930 MtrunA17_Chr4g0029161 30.570 193 94 6 262 450 256 412 1.89e-15 78.2
Msa1016930 MtrunA17_Chr6g0453981 24.876 201 134 4 124 307 4 204 3.62e-14 72.0
Msa1016930 MtrunA17_Chr6g0469951 40.244 82 45 2 382 460 1 81 1.28e-11 60.8
Msa1016930 MtrunA17_Chr6g0454391 40.909 66 35 1 360 425 13 74 1.38e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016930 AT4G01070.1 45.607 478 250 4 2 476 4 474 6.95e-150 436
Msa1016930 AT1G01420.1 45.259 464 243 5 2 462 4 459 1.77e-145 425
Msa1016930 AT1G01420.2 45.259 464 243 5 2 462 7 462 1.97e-145 425
Msa1016930 AT1G01390.1 43.187 477 258 5 2 475 4 470 1.38e-131 389
Msa1016930 AT1G01390.2 43.187 477 258 5 2 475 21 487 1.96e-131 390
Msa1016930 AT5G66690.1 36.383 470 260 9 6 458 7 454 8.38e-93 290
Msa1016930 AT5G26310.1 34.792 480 284 10 6 472 7 470 1.09e-91 287
Msa1016930 AT4G01070.2 42.614 352 190 5 2 350 4 346 4.62e-91 281
Msa1016930 AT2G18570.1 35.565 478 276 12 6 468 5 465 1.34e-89 281
Msa1016930 AT3G50740.1 35.470 468 272 9 6 457 7 460 3.72e-88 278
Msa1016930 AT2G18560.1 39.175 388 211 7 93 468 1 375 4.59e-82 259
Msa1016930 AT4G36770.1 34.615 468 262 13 5 452 3 446 4.87e-80 256
Msa1016930 AT3G16520.3 33.115 459 280 9 13 462 12 452 1.11e-79 255
Msa1016930 AT3G16520.2 32.816 451 276 9 13 454 12 444 2.03e-77 249
Msa1016930 AT3G16520.1 32.816 451 276 9 13 454 12 444 2.14e-77 249
Msa1016930 AT1G07250.1 34.490 490 274 18 1 465 1 468 9.62e-75 243
Msa1016930 AT1G07260.1 33.198 491 286 18 1 469 1 471 1.02e-70 232
Msa1016930 AT2G29740.1 34.375 480 270 19 10 465 12 470 3.97e-66 220
Msa1016930 AT2G29750.1 32.794 494 266 20 6 465 8 469 3.13e-65 218
Msa1016930 AT3G21750.1 31.276 486 285 12 5 465 3 464 3.66e-65 218
Msa1016930 AT1G07240.1 32.033 487 290 15 3 465 2 471 1.40e-61 208
Msa1016930 AT2G29730.1 29.436 479 300 16 3 465 2 458 1.92e-59 202
Msa1016930 AT3G21790.1 29.522 481 300 14 10 465 8 474 1.75e-58 201
Msa1016930 AT2G29710.1 29.832 476 288 15 10 465 9 458 1.98e-58 200
Msa1016930 AT1G78270.1 31.277 470 278 13 6 451 13 461 2.38e-58 200
Msa1016930 AT1G22400.1 28.660 485 291 13 6 460 13 472 1.60e-57 198
Msa1016930 AT4G15280.1 30.346 491 288 19 5 465 3 469 1.74e-57 197
Msa1016930 AT3G21800.1 29.713 488 300 16 10 472 9 478 1.77e-57 197
Msa1016930 AT1G22380.1 28.571 476 287 12 6 453 13 463 2.93e-57 197
Msa1016930 AT4G15280.2 30.346 491 288 19 5 465 35 501 4.10e-57 197
Msa1016930 AT3G21780.1 30.526 475 303 14 5 465 3 464 9.15e-57 196
Msa1016930 AT1G05675.1 29.583 480 291 11 1 465 1 448 5.85e-56 193
Msa1016930 AT1G22360.1 27.146 501 305 13 1 469 5 477 7.19e-56 193
Msa1016930 AT1G22340.1 28.221 489 296 15 2 460 9 472 1.32e-55 193
Msa1016930 AT2G31790.1 29.140 477 297 10 2 465 4 452 2.69e-54 189
Msa1016930 AT1G05680.1 28.870 478 297 11 1 465 1 448 9.42e-54 187
Msa1016930 AT3G21760.1 32.161 398 228 15 94 465 95 476 4.70e-53 186
Msa1016930 AT1G73880.1 31.864 499 271 21 6 475 14 472 6.62e-53 185
Msa1016930 AT2G43820.1 29.817 493 274 17 3 471 4 448 1.93e-52 183
Msa1016930 AT2G31750.1 32.172 373 216 8 106 465 102 450 4.39e-52 182
Msa1016930 AT2G31750.2 32.172 373 216 8 106 465 102 450 1.08e-51 182
Msa1016930 AT2G15490.1 38.662 269 148 5 210 469 220 480 1.47e-51 182
Msa1016930 AT2G43840.2 29.857 489 271 18 6 470 7 447 1.89e-51 181
Msa1016930 AT2G36970.1 30.469 384 237 8 105 476 116 481 2.60e-51 181
Msa1016930 AT2G43840.1 29.652 489 272 18 6 470 7 447 5.95e-51 179
Msa1016930 AT4G15260.1 30.471 361 224 10 120 465 2 350 7.37e-50 174
Msa1016930 AT2G15490.3 37.918 269 147 5 210 469 220 477 4.10e-49 175
Msa1016930 AT2G30140.2 28.085 470 292 10 6 465 13 446 9.18e-49 174
Msa1016930 AT1G22360.2 25.948 501 299 14 1 469 5 465 1.16e-48 174
Msa1016930 AT2G30140.1 28.025 471 292 10 6 465 13 447 1.74e-48 173
Msa1016930 AT1G22370.2 27.564 468 297 12 6 453 13 458 2.50e-48 173
Msa1016930 AT2G16890.2 28.395 486 278 16 6 459 9 456 5.76e-48 172
Msa1016930 AT2G15480.1 36.803 269 150 6 210 469 223 480 7.91e-48 172
Msa1016930 AT3G53150.1 29.644 506 290 17 2 462 18 502 1.10e-47 172
Msa1016930 AT4G34138.1 36.364 264 142 6 210 462 223 471 1.61e-47 171
Msa1016930 AT2G28080.1 31.818 352 214 9 114 459 129 460 2.79e-47 170
Msa1016930 AT2G15480.2 37.091 275 143 8 210 465 223 486 5.34e-47 170
Msa1016930 AT1G24100.1 28.543 494 282 14 6 473 11 459 2.34e-45 164
Msa1016930 AT3G53160.1 38.148 270 139 7 206 458 213 471 2.81e-45 165
Msa1016930 AT4G34131.1 36.604 265 137 8 208 458 221 468 1.27e-44 163
Msa1016930 AT2G36800.1 31.565 377 210 12 110 458 120 476 3.29e-44 162
Msa1016930 AT2G36780.1 32.973 370 207 12 127 467 139 496 5.49e-44 162
Msa1016930 AT3G11340.1 29.358 436 270 12 29 458 30 433 6.00e-44 160
Msa1016930 AT5G05880.1 30.878 353 214 10 127 472 122 451 2.51e-43 159
Msa1016930 AT5G03490.1 28.543 494 270 19 2 464 15 456 5.15e-43 158
Msa1016930 AT4G34135.1 37.768 233 121 5 208 429 222 441 5.96e-43 159
Msa1016930 AT4G15480.1 31.351 370 226 12 111 469 126 478 6.43e-43 159
Msa1016930 AT2G36760.1 37.970 266 137 8 210 458 223 477 3.15e-42 157
Msa1016930 AT5G05870.1 33.239 355 200 11 127 469 125 454 7.96e-42 155
Msa1016930 AT2G36770.1 36.604 265 142 8 210 458 223 477 8.21e-42 155
Msa1016930 AT2G16890.3 28.097 452 255 16 6 425 9 422 1.36e-41 154
Msa1016930 AT1G51210.1 29.258 458 260 17 6 444 20 432 1.58e-41 154
Msa1016930 AT5G14860.1 27.254 488 286 17 9 459 9 464 4.62e-41 154
Msa1016930 AT5G12890.1 29.234 496 297 19 2 465 4 477 4.79e-41 153
Msa1016930 AT2G36750.1 34.444 270 149 7 206 458 214 472 1.76e-40 152
Msa1016930 AT5G59590.1 26.261 476 309 15 3 469 7 449 2.34e-40 150
Msa1016930 AT3G46680.1 31.608 367 213 10 112 467 108 447 2.69e-40 150
Msa1016930 AT4G15550.1 32.164 342 207 9 126 458 137 462 3.01e-40 151
Msa1016930 AT3G55700.1 27.706 462 303 12 3 459 5 440 5.10e-40 150
Msa1016930 AT3G46670.1 28.092 477 285 17 6 465 9 444 9.92e-40 149
Msa1016930 AT1G10400.1 27.126 494 308 15 3 474 4 467 1.19e-39 149
Msa1016930 AT4G15490.1 28.385 384 241 13 100 469 103 466 1.26e-39 149
Msa1016930 AT1G22370.1 33.333 282 161 8 182 453 24 288 5.17e-39 144
Msa1016930 AT3G46700.1 29.891 368 227 9 112 471 102 446 1.12e-38 146
Msa1016930 AT1G05560.1 29.917 361 214 12 111 458 106 440 1.58e-38 146
Msa1016930 AT1G05560.2 29.917 361 214 12 111 458 156 490 1.87e-38 147
Msa1016930 AT3G55710.1 28.694 467 296 13 3 459 5 444 2.10e-38 145
Msa1016930 AT2G30150.2 27.044 477 290 14 6 465 13 448 5.57e-38 144
Msa1016930 AT5G59580.1 26.050 476 305 16 6 470 9 448 1.17e-37 143
Msa1016930 AT5G05890.1 29.851 335 214 6 142 472 138 455 1.26e-37 143
Msa1016930 AT3G46690.1 29.426 401 249 11 73 462 65 442 1.30e-37 143
Msa1016930 AT3G21560.1 26.984 378 237 12 108 469 118 472 2.41e-37 143
Msa1016930 AT2G23260.1 29.213 356 222 9 115 459 107 443 2.45e-37 142
Msa1016930 AT4G14090.1 28.418 373 235 9 101 465 103 451 3.20e-37 142
Msa1016930 AT5G05860.1 37.288 236 131 5 234 469 229 447 3.78e-37 142
Msa1016930 AT5G17050.1 27.461 386 247 8 81 459 87 446 4.98e-37 142
Msa1016930 AT3G46660.1 26.752 471 299 15 7 465 15 451 5.83e-37 141
Msa1016930 AT2G36790.1 36.466 266 141 7 210 458 222 476 5.98e-37 142
Msa1016930 AT3G02100.1 25.918 490 298 15 6 471 13 461 8.03e-37 141
Msa1016930 AT2G30150.1 27.021 470 285 14 13 465 4 432 4.83e-36 139
Msa1016930 AT1G30530.1 27.557 352 225 7 112 458 113 439 1.98e-35 137
Msa1016930 AT5G38010.1 29.745 353 221 10 112 458 111 442 2.02e-35 137
Msa1016930 AT1G05530.1 34.496 258 157 6 212 465 201 450 3.06e-35 137
Msa1016930 AT3G46720.1 35.747 221 120 3 255 475 248 446 3.49e-35 136
Msa1016930 AT4G15500.1 26.178 382 251 10 100 469 100 462 3.98e-35 137
Msa1016930 AT3G46650.1 27.200 375 237 9 92 465 89 428 9.01e-35 135
Msa1016930 AT5G49690.1 35.772 246 124 7 208 446 214 432 1.08e-34 135
Msa1016930 AT2G26480.1 31.445 353 211 12 115 458 104 434 1.08e-34 135
Msa1016930 AT5G17040.1 26.452 465 289 16 6 458 5 428 1.08e-34 135
Msa1016930 AT1G06000.1 34.510 255 152 5 210 458 177 422 1.17e-34 135
Msa1016930 AT5G38040.1 26.754 456 302 13 14 465 18 445 1.88e-34 134
Msa1016930 AT5G05900.1 30.636 346 199 14 127 462 126 440 2.94e-34 134
Msa1016930 AT2G23250.1 27.654 358 232 8 115 465 94 431 3.07e-34 134
Msa1016930 AT5G65550.1 35.294 204 113 4 239 438 243 431 2.89e-33 131
Msa1016930 AT2G22590.1 33.182 220 134 3 239 455 247 456 9.03e-33 130
Msa1016930 AT5G17040.2 31.855 248 144 5 213 458 102 326 2.38e-32 126
Msa1016930 AT5G17030.1 30.040 253 152 5 208 458 215 444 7.12e-31 124
Msa1016930 AT3G22250.1 34.649 228 115 9 230 449 240 441 9.85e-31 124
Msa1016930 AT4G27570.1 29.143 350 198 9 115 448 111 426 8.65e-30 121
Msa1016930 AT1G64910.1 25.104 482 307 13 1 471 1 439 1.35e-29 120
Msa1016930 AT5G53990.1 25.107 466 270 15 1 449 18 421 1.75e-26 112
Msa1016930 AT4G27560.1 27.507 349 203 9 115 447 111 425 3.72e-26 111
Msa1016930 AT5G37950.2 28.417 278 172 7 112 384 83 338 9.90e-26 108
Msa1016930 AT5G54010.1 25.652 460 278 15 1 439 1 417 1.57e-25 109
Msa1016930 AT5G37950.1 28.369 282 173 8 112 384 83 344 7.23e-25 105
Msa1016930 AT5G54060.1 29.630 243 152 5 228 469 238 462 1.07e-23 103
Msa1016930 AT3G29630.1 27.066 351 204 10 115 449 110 424 1.87e-23 103
Msa1016930 AT1G50580.1 29.018 224 142 5 228 449 214 422 1.09e-22 100
Msa1016930 AT3G29630.2 33.333 192 110 4 263 449 220 398 1.27e-22 100
Msa1016930 AT2G22930.1 27.016 248 154 5 229 472 216 440 1.47e-21 97.4
Msa1016930 AT4G09500.2 28.194 227 138 5 228 449 215 421 2.12e-20 94.0
Msa1016930 AT1G64920.1 27.679 224 139 6 229 446 216 422 2.36e-20 94.0
Msa1016930 AT4G09500.1 29.756 205 127 4 250 449 204 396 3.97e-20 92.8
Msa1016930 AT4G34135.2 35.238 105 63 2 208 307 222 326 1.27e-11 66.2

Find 92 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATGGCAATTTGCCAATT+TGG 0.159913 7_1:+34967765 Msa1016930:CDS
AAGGATTAGTTGTACCTAAT+TGG 0.172999 7_1:+34967412 Msa1016930:CDS
GGTTAACAGTTTCTTGAAAA+TGG 0.225139 7_1:+34967026 Msa1016930:CDS
GTGGGACCCATTATTCAAAA+TGG 0.231271 7_1:+34967099 Msa1016930:CDS
TTTCCAATCTATTACCAAAT+TGG 0.240656 7_1:-34967779 None:intergenic
CCAGGTTGTGTACCTATTAA+TGG 0.251894 7_1:+34966907 Msa1016930:CDS
GAAATTTCTTCATGAAGTTT+TGG 0.252811 7_1:-34966847 None:intergenic
CAAGTTAATGAGTTAGCTTT+AGG 0.262521 7_1:+34967249 Msa1016930:CDS
GTGAGACTGCTAGTTGGATT+TGG 0.325157 7_1:-34966639 None:intergenic
TTGCCAATTTGGTAATAGAT+TGG 0.328791 7_1:+34967776 Msa1016930:CDS
TTGAGTAATGTGAGGGTTGC+TGG 0.331250 7_1:-34966535 None:intergenic
TGCTGCTATATGAATTGTTT+TGG 0.333094 7_1:-34966395 None:intergenic
GGTAAATCAATACCATTAAT+AGG 0.340681 7_1:-34966919 None:intergenic
AAGTTAATGAGTTAGCTTTA+GGG 0.353286 7_1:+34967250 Msa1016930:CDS
AATGAAGCTATTCAAGTTCC+AGG 0.363024 7_1:+34966889 Msa1016930:CDS
GTAATAGATTGGAAAGTTAC+GGG 0.380417 7_1:+34967787 Msa1016930:CDS
TGTGTTTGAGGTGCCCAATT+AGG 0.398415 7_1:-34967426 None:intergenic
GACCGATCTTGAAAATGTTC+AGG 0.400675 7_1:-34966940 None:intergenic
GGTAATAGATTGGAAAGTTA+CGG 0.402122 7_1:+34967786 Msa1016930:CDS
TCATCAAATGAAGCTTATCT+TGG 0.403093 7_1:+34967324 Msa1016930:CDS
ATGATGAAGGAAATGTGATT+AGG 0.407771 7_1:+34967682 Msa1016930:CDS
TGCTGGGAGAGGTGAATCTA+TGG 0.408588 7_1:-34966518 None:intergenic
TTCAATGAGGGTGGGTTAGT+TGG 0.411849 7_1:+34967618 Msa1016930:CDS
AGGATTAGTTGTACCTAATT+GGG 0.413108 7_1:+34967413 Msa1016930:CDS
GAAGCTTGGTGGCTGAATGC+TGG 0.419878 7_1:-34966427 None:intergenic
GGAAAATACAATGAAAGCCT+TGG 0.437688 7_1:+34967050 Msa1016930:CDS
TGATGAAGGAAATGTGATTA+GGG 0.447224 7_1:+34967683 Msa1016930:CDS
TTTCTTGCAAAATTCTATGA+TGG 0.452593 7_1:-34966449 None:intergenic
AGAAGATGGGTCCTCCACTA+TGG 0.458782 7_1:+34967749 Msa1016930:CDS
AACAAAGGCCAAGCAATCAT+TGG 0.460309 7_1:-34967531 None:intergenic
TGGCTCAAAATTTGTGTTTG+AGG 0.465442 7_1:-34967438 None:intergenic
TTTGTTATGTGATGGAGTTA+AGG 0.471981 7_1:+34967578 Msa1016930:CDS
TGGGACCCATTATTCAAAAT+GGG 0.476775 7_1:+34967100 Msa1016930:CDS
TGATTCTCAAACGTTGCAAA+AGG 0.476821 7_1:+34966980 Msa1016930:CDS
AAAGTGTAGGTAATATTTGA+AGG 0.480946 7_1:-34966565 None:intergenic
GTTCTTGAGAGTGTTGTGTT+GGG 0.483122 7_1:+34967504 Msa1016930:CDS
TGGGTGTGCCAATGATTGCT+TGG 0.488395 7_1:+34967523 Msa1016930:CDS
GCTTTAGGGTTGGAATTAAG+TGG 0.489446 7_1:+34967264 Msa1016930:CDS
AGTTCTTGAGAGTGTTGTGT+TGG 0.490935 7_1:+34967503 Msa1016930:CDS
AAAAGGTTCAATCTTGCTGA+TGG 0.496982 7_1:+34966997 Msa1016930:CDS
GAAATTGTGGTGTGAAAAGA+TGG 0.497319 7_1:-34966670 None:intergenic
GCTAGTTGGATTTGGACTGC+TGG 0.500784 7_1:-34966631 None:intergenic
TAATGAGTTAGCTTTAGGGT+TGG 0.506204 7_1:+34967254 Msa1016930:CDS
AGAATCATTATGTTCTTCCA+AGG 0.508601 7_1:-34967067 None:intergenic
AAGCTTGGTGGCTGAATGCT+GGG 0.510489 7_1:-34966426 None:intergenic
GGAAATATATATAAGATAAG+AGG 0.514267 7_1:-34966786 None:intergenic
GAAGAGATTTGAGTAATGTG+AGG 0.516546 7_1:-34966543 None:intergenic
TGAGTAATGTGAGGGTTGCT+GGG 0.520973 7_1:-34966534 None:intergenic
AGGTTAAAGTTCAATGAGGG+TGG 0.521011 7_1:+34967609 Msa1016930:CDS
GTTGATGCATTGAAAGAAGA+TGG 0.524907 7_1:+34967735 Msa1016930:CDS
AAGAGATTTGAGTAATGTGA+GGG 0.536880 7_1:-34966542 None:intergenic
AAAGGTTCAATCTTGCTGAT+GGG 0.548638 7_1:+34966998 Msa1016930:CDS
GGGAGAGGTGAATCTATGGT+AGG 0.549019 7_1:-34966514 None:intergenic
TGGTTATGTGGAAGTGATTG+TGG 0.550508 7_1:-34966483 None:intergenic
GGTGGTTAAAGAGTTGATGT+TGG 0.552231 7_1:+34967659 Msa1016930:CDS
AAATTGGCAAATTGCCATAG+TGG 0.553485 7_1:-34967763 None:intergenic
TGGATTGTGAGACTGCTAGT+TGG 0.553591 7_1:-34966645 None:intergenic
TTGTATGTTTCATTTGGGAG+TGG 0.554619 7_1:+34967207 Msa1016930:CDS
AAAATTCTATGATGGAAGCT+TGG 0.557066 7_1:-34966441 None:intergenic
AATGTGAGGGTTGCTGGGAG+AGG 0.559403 7_1:-34966529 None:intergenic
TAACAGTTTCTTGAAAATGG+AGG 0.559690 7_1:+34967029 Msa1016930:CDS
ACCAAATGAAAACTACAAGT+TGG 0.560108 7_1:-34967811 None:intergenic
TGTGGTGTGAAAAGATGGCA+TGG 0.560603 7_1:-34966665 None:intergenic
CAGAGATGAAATTGCTAAGG+TGG 0.562428 7_1:+34967641 Msa1016930:CDS
CCATTAATAGGTACACAACC+TGG 0.570688 7_1:-34966907 None:intergenic
CAGATTTAGAGTGTTTGAAG+TGG 0.570914 7_1:+34967157 Msa1016930:CDS
TGAACAAAGTGAAGAAATTG+TGG 0.573966 7_1:-34966683 None:intergenic
ATTCTATGATGGAAGCTTGG+TGG 0.581162 7_1:-34966438 None:intergenic
TCGAGTGATTCGTTTGCGAA+CGG 0.583039 7_1:-34966745 None:intergenic
TGATTCGTTTGCGAACGGAT+CGG 0.587548 7_1:-34966740 None:intergenic
AAGGAAATGTGATTAGGGAA+AGG 0.587714 7_1:+34967688 Msa1016930:CDS
TAGGGAATATGATGGTTATG+TGG 0.588748 7_1:-34966495 None:intergenic
AGTGAGAGTGTCATTGCTGA+AGG 0.590631 7_1:-34966811 None:intergenic
TATGTTTCATTTGGGAGTGG+CGG 0.596117 7_1:+34967210 Msa1016930:CDS
GGTTAAAGTTCAATGAGGGT+GGG 0.599699 7_1:+34967610 Msa1016930:CDS
GGAGAGGTGAATCTATGGTA+GGG 0.603379 7_1:-34966513 None:intergenic
GAGAGTGTCATTGCTGAAGG+AGG 0.608432 7_1:-34966808 None:intergenic
AATGAGGTTAAAGTTCAATG+AGG 0.609096 7_1:+34967605 Msa1016930:CDS
TGGCAGAGATGAAATTGCTA+AGG 0.610903 7_1:+34967638 Msa1016930:CDS
GATTGGAGGGAGGAAAGTGT+AGG 0.612217 7_1:-34966578 None:intergenic
ATCTATGGTAGGGAATATGA+TGG 0.615010 7_1:-34966503 None:intergenic
TTAGAGAGCACTAAAGGACA+AGG 0.616422 7_1:+34967393 Msa1016930:CDS
AGAGTGTCATTGCTGAAGGA+GGG 0.618923 7_1:-34966807 None:intergenic
GTAATTAAAGCAACAAGTGG+TGG 0.619666 7_1:-34966718 None:intergenic
GCTTCATTTGATGAATCACT+AGG 0.622417 7_1:-34967315 None:intergenic
AAAATGCACCAATTGACCCA+TGG 0.629479 7_1:-34967458 None:intergenic
TTGATGCATTGAAAGAAGAT+GGG 0.642478 7_1:+34967736 Msa1016930:CDS
ATGAGGTTAAAGTTCAATGA+GGG 0.644026 7_1:+34967606 Msa1016930:CDS
TCGGTAATTAAAGCAACAAG+TGG 0.656474 7_1:-34966721 None:intergenic
TTGGCAAATTGCCATAGTGG+AGG 0.663717 7_1:-34967760 None:intergenic
GAGTTGATGTTGGATGATGA+AGG 0.668352 7_1:+34967669 Msa1016930:CDS
ATGGAGTTAAGGTTGCAATG+AGG 0.735251 7_1:+34967589 Msa1016930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTGGTAAAAAATTTAAA+GGG - chr7_1:34967368-34967387 None:intergenic 15.0%
!!! CTTTTGGTAAAAAATTTAAA+GGG - chr7_1:34967368-34967387 None:intergenic 15.0%
!! GGAAATATATATAAGATAAG+AGG - chr7_1:34966789-34966808 None:intergenic 20.0%
!!! CCTTTTGGTAAAAAATTTAA+AGG - chr7_1:34967369-34967388 None:intergenic 20.0%
!!! CCTTTAAATTTTTTACCAAA+AGG + chr7_1:34967366-34967385 Msa1016930:CDS 20.0%
!! GGAAATATATATAAGATAAG+AGG - chr7_1:34966789-34966808 None:intergenic 20.0%
!!! CCTTTTGGTAAAAAATTTAA+AGG - chr7_1:34967369-34967388 None:intergenic 20.0%
!!! CCTTTAAATTTTTTACCAAA+AGG + chr7_1:34967366-34967385 Msa1016930:CDS 20.0%
! TTTCTTGCAAAATTCTATGA+TGG - chr7_1:34966452-34966471 None:intergenic 25.0%
! AAAGTGTAGGTAATATTTGA+AGG - chr7_1:34966568-34966587 None:intergenic 25.0%
!! GAAATTTCTTCATGAAGTTT+TGG - chr7_1:34966850-34966869 None:intergenic 25.0%
! GGTAAATCAATACCATTAAT+AGG - chr7_1:34966922-34966941 None:intergenic 25.0%
!!! TAATGATTCTGTTTTTCTTG+TGG + chr7_1:34967080-34967099 Msa1016930:CDS 25.0%
!!! AATGATTCTGTTTTTCTTGT+GGG + chr7_1:34967081-34967100 Msa1016930:CDS 25.0%
!! TTTGTCCCATTTTGAATAAT+GGG - chr7_1:34967108-34967127 None:intergenic 25.0%
!! ATTTGTCCCATTTTGAATAA+TGG - chr7_1:34967109-34967128 None:intergenic 25.0%
!! TCTGTTTTGTATGTTTCATT+TGG + chr7_1:34967201-34967220 Msa1016930:CDS 25.0%
!! CTGTTTTGTATGTTTCATTT+GGG + chr7_1:34967202-34967221 Msa1016930:CDS 25.0%
!!! AAGTTAATGAGTTAGCTTTA+GGG + chr7_1:34967250-34967269 Msa1016930:CDS 25.0%
!! TAAGTGGTCAAAAGTTTTTA+TGG + chr7_1:34967280-34967299 Msa1016930:CDS 25.0%
!! AAGTGGTCAAAAGTTTTTAT+GGG + chr7_1:34967281-34967300 Msa1016930:CDS 25.0%
! TTTCCAATCTATTACCAAAT+TGG - chr7_1:34967782-34967801 None:intergenic 25.0%
! TTTCTTGCAAAATTCTATGA+TGG - chr7_1:34966452-34966471 None:intergenic 25.0%
! AAAGTGTAGGTAATATTTGA+AGG - chr7_1:34966568-34966587 None:intergenic 25.0%
!! GAAATTTCTTCATGAAGTTT+TGG - chr7_1:34966850-34966869 None:intergenic 25.0%
! GGTAAATCAATACCATTAAT+AGG - chr7_1:34966922-34966941 None:intergenic 25.0%
!!! TAATGATTCTGTTTTTCTTG+TGG + chr7_1:34967080-34967099 Msa1016930:CDS 25.0%
!!! AATGATTCTGTTTTTCTTGT+GGG + chr7_1:34967081-34967100 Msa1016930:CDS 25.0%
!! TTTGTCCCATTTTGAATAAT+GGG - chr7_1:34967108-34967127 None:intergenic 25.0%
!! ATTTGTCCCATTTTGAATAA+TGG - chr7_1:34967109-34967128 None:intergenic 25.0%
!! TCTGTTTTGTATGTTTCATT+TGG + chr7_1:34967201-34967220 Msa1016930:CDS 25.0%
!! CTGTTTTGTATGTTTCATTT+GGG + chr7_1:34967202-34967221 Msa1016930:CDS 25.0%
!!! AAGTTAATGAGTTAGCTTTA+GGG + chr7_1:34967250-34967269 Msa1016930:CDS 25.0%
!! TAAGTGGTCAAAAGTTTTTA+TGG + chr7_1:34967280-34967299 Msa1016930:CDS 25.0%
!! AAGTGGTCAAAAGTTTTTAT+GGG + chr7_1:34967281-34967300 Msa1016930:CDS 25.0%
! TTTCCAATCTATTACCAAAT+TGG - chr7_1:34967782-34967801 None:intergenic 25.0%
! TGCTGCTATATGAATTGTTT+TGG - chr7_1:34966398-34966417 None:intergenic 30.0%
! AAAATTCTATGATGGAAGCT+TGG - chr7_1:34966444-34966463 None:intergenic 30.0%
AAGAGATTTGAGTAATGTGA+GGG - chr7_1:34966545-34966564 None:intergenic 30.0%
!! GAGAATTTTTGTTGATTGGA+GGG - chr7_1:34966594-34966613 None:intergenic 30.0%
!! AGAGAATTTTTGTTGATTGG+AGG - chr7_1:34966595-34966614 None:intergenic 30.0%
TGAACAAAGTGAAGAAATTG+TGG - chr7_1:34966686-34966705 None:intergenic 30.0%
!!! CTTCATGAAGTTTTGGAAAA+TGG - chr7_1:34966843-34966862 None:intergenic 30.0%
!! TACCTGAACATTTTCAAGAT+CGG + chr7_1:34966938-34966957 Msa1016930:CDS 30.0%
GGTTAACAGTTTCTTGAAAA+TGG + chr7_1:34967026-34967045 Msa1016930:CDS 30.0%
TAACAGTTTCTTGAAAATGG+AGG + chr7_1:34967029-34967048 Msa1016930:CDS 30.0%
AGAATCATTATGTTCTTCCA+AGG - chr7_1:34967070-34967089 None:intergenic 30.0%
!! CAAGTTAATGAGTTAGCTTT+AGG + chr7_1:34967249-34967268 Msa1016930:CDS 30.0%
TCATCAAATGAAGCTTATCT+TGG + chr7_1:34967324-34967343 Msa1016930:CDS 30.0%
!! AAGGATTAGTTGTACCTAAT+TGG + chr7_1:34967412-34967431 Msa1016930:CDS 30.0%
!! AGGATTAGTTGTACCTAATT+GGG + chr7_1:34967413-34967432 Msa1016930:CDS 30.0%
! AAACACAAATTTTGAGCCAT+GGG + chr7_1:34967442-34967461 Msa1016930:CDS 30.0%
!!! ATTTTTTGCTCAGCAAACAA+AGG - chr7_1:34967549-34967568 None:intergenic 30.0%
!!! AATGCTGTTTTGTTATGTGA+TGG + chr7_1:34967570-34967589 Msa1016930:CDS 30.0%
! TTTGTTATGTGATGGAGTTA+AGG + chr7_1:34967578-34967597 Msa1016930:CDS 30.0%
AATGAGGTTAAAGTTCAATG+AGG + chr7_1:34967605-34967624 Msa1016930:CDS 30.0%
ATGAGGTTAAAGTTCAATGA+GGG + chr7_1:34967606-34967625 Msa1016930:CDS 30.0%
ATGATGAAGGAAATGTGATT+AGG + chr7_1:34967682-34967701 Msa1016930:CDS 30.0%
TGATGAAGGAAATGTGATTA+GGG + chr7_1:34967683-34967702 Msa1016930:CDS 30.0%
TTGATGCATTGAAAGAAGAT+GGG + chr7_1:34967736-34967755 Msa1016930:CDS 30.0%
! TTGCCAATTTGGTAATAGAT+TGG + chr7_1:34967776-34967795 Msa1016930:CDS 30.0%
GGTAATAGATTGGAAAGTTA+CGG + chr7_1:34967786-34967805 Msa1016930:CDS 30.0%
GTAATAGATTGGAAAGTTAC+GGG + chr7_1:34967787-34967806 Msa1016930:CDS 30.0%
! TGCTGCTATATGAATTGTTT+TGG - chr7_1:34966398-34966417 None:intergenic 30.0%
! AAAATTCTATGATGGAAGCT+TGG - chr7_1:34966444-34966463 None:intergenic 30.0%
AAGAGATTTGAGTAATGTGA+GGG - chr7_1:34966545-34966564 None:intergenic 30.0%
!! GAGAATTTTTGTTGATTGGA+GGG - chr7_1:34966594-34966613 None:intergenic 30.0%
!! AGAGAATTTTTGTTGATTGG+AGG - chr7_1:34966595-34966614 None:intergenic 30.0%
TGAACAAAGTGAAGAAATTG+TGG - chr7_1:34966686-34966705 None:intergenic 30.0%
!!! CTTCATGAAGTTTTGGAAAA+TGG - chr7_1:34966843-34966862 None:intergenic 30.0%
!! TACCTGAACATTTTCAAGAT+CGG + chr7_1:34966938-34966957 Msa1016930:CDS 30.0%
GGTTAACAGTTTCTTGAAAA+TGG + chr7_1:34967026-34967045 Msa1016930:CDS 30.0%
TAACAGTTTCTTGAAAATGG+AGG + chr7_1:34967029-34967048 Msa1016930:CDS 30.0%
AGAATCATTATGTTCTTCCA+AGG - chr7_1:34967070-34967089 None:intergenic 30.0%
!! CAAGTTAATGAGTTAGCTTT+AGG + chr7_1:34967249-34967268 Msa1016930:CDS 30.0%
TCATCAAATGAAGCTTATCT+TGG + chr7_1:34967324-34967343 Msa1016930:CDS 30.0%
!! AAGGATTAGTTGTACCTAAT+TGG + chr7_1:34967412-34967431 Msa1016930:CDS 30.0%
!! AGGATTAGTTGTACCTAATT+GGG + chr7_1:34967413-34967432 Msa1016930:CDS 30.0%
! AAACACAAATTTTGAGCCAT+GGG + chr7_1:34967442-34967461 Msa1016930:CDS 30.0%
!!! ATTTTTTGCTCAGCAAACAA+AGG - chr7_1:34967549-34967568 None:intergenic 30.0%
!!! AATGCTGTTTTGTTATGTGA+TGG + chr7_1:34967570-34967589 Msa1016930:CDS 30.0%
! TTTGTTATGTGATGGAGTTA+AGG + chr7_1:34967578-34967597 Msa1016930:CDS 30.0%
AATGAGGTTAAAGTTCAATG+AGG + chr7_1:34967605-34967624 Msa1016930:CDS 30.0%
ATGAGGTTAAAGTTCAATGA+GGG + chr7_1:34967606-34967625 Msa1016930:CDS 30.0%
ATGATGAAGGAAATGTGATT+AGG + chr7_1:34967682-34967701 Msa1016930:CDS 30.0%
TGATGAAGGAAATGTGATTA+GGG + chr7_1:34967683-34967702 Msa1016930:CDS 30.0%
TTGATGCATTGAAAGAAGAT+GGG + chr7_1:34967736-34967755 Msa1016930:CDS 30.0%
! TTGCCAATTTGGTAATAGAT+TGG + chr7_1:34967776-34967795 Msa1016930:CDS 30.0%
GGTAATAGATTGGAAAGTTA+CGG + chr7_1:34967786-34967805 Msa1016930:CDS 30.0%
GTAATAGATTGGAAAGTTAC+GGG + chr7_1:34967787-34967806 Msa1016930:CDS 30.0%
TAGGGAATATGATGGTTATG+TGG - chr7_1:34966498-34966517 None:intergenic 35.0%
ATCTATGGTAGGGAATATGA+TGG - chr7_1:34966506-34966525 None:intergenic 35.0%
GAAGAGATTTGAGTAATGTG+AGG - chr7_1:34966546-34966565 None:intergenic 35.0%
!! AATTTTTGTTGATTGGAGGG+AGG - chr7_1:34966591-34966610 None:intergenic 35.0%
! GGGAGAGAATTTTTGTTGAT+TGG - chr7_1:34966598-34966617 None:intergenic 35.0%
GAAATTGTGGTGTGAAAAGA+TGG - chr7_1:34966673-34966692 None:intergenic 35.0%
GTAATTAAAGCAACAAGTGG+TGG - chr7_1:34966721-34966740 None:intergenic 35.0%
TCGGTAATTAAAGCAACAAG+TGG - chr7_1:34966724-34966743 None:intergenic 35.0%
! AATGAAGCTATTCAAGTTCC+AGG + chr7_1:34966889-34966908 Msa1016930:CDS 35.0%
TGATTCTCAAACGTTGCAAA+AGG + chr7_1:34966980-34966999 Msa1016930:CDS 35.0%
AAAAGGTTCAATCTTGCTGA+TGG + chr7_1:34966997-34967016 Msa1016930:CDS 35.0%
AAAGGTTCAATCTTGCTGAT+GGG + chr7_1:34966998-34967017 Msa1016930:CDS 35.0%
GGAAAATACAATGAAAGCCT+TGG + chr7_1:34967050-34967069 Msa1016930:CDS 35.0%
TGGGACCCATTATTCAAAAT+GGG + chr7_1:34967100-34967119 Msa1016930:CDS 35.0%
! CAGATTTAGAGTGTTTGAAG+TGG + chr7_1:34967157-34967176 Msa1016930:CDS 35.0%
TTGTATGTTTCATTTGGGAG+TGG + chr7_1:34967207-34967226 Msa1016930:CDS 35.0%
!! TAATGAGTTAGCTTTAGGGT+TGG + chr7_1:34967254-34967273 Msa1016930:CDS 35.0%
GCTTCATTTGATGAATCACT+AGG - chr7_1:34967318-34967337 None:intergenic 35.0%
!! GTGCTCTCTAAAAAACCTTT+TGG - chr7_1:34967384-34967403 None:intergenic 35.0%
!!! GGTTTTTTAGAGAGCACTAA+AGG + chr7_1:34967387-34967406 Msa1016930:CDS 35.0%
TGGCTCAAAATTTGTGTTTG+AGG - chr7_1:34967441-34967460 None:intergenic 35.0%
! CAAACACAAATTTTGAGCCA+TGG + chr7_1:34967441-34967460 Msa1016930:CDS 35.0%
!! CATTTTTGACTCATTGTGGT+TGG + chr7_1:34967475-34967494 Msa1016930:CDS 35.0%
AAGGAAATGTGATTAGGGAA+AGG + chr7_1:34967688-34967707 Msa1016930:CDS 35.0%
GTTGATGCATTGAAAGAAGA+TGG + chr7_1:34967735-34967754 Msa1016930:CDS 35.0%
AAATTGGCAAATTGCCATAG+TGG - chr7_1:34967766-34967785 None:intergenic 35.0%
ACTATGGCAATTTGCCAATT+TGG + chr7_1:34967765-34967784 Msa1016930:CDS 35.0%
TAGGGAATATGATGGTTATG+TGG - chr7_1:34966498-34966517 None:intergenic 35.0%
ATCTATGGTAGGGAATATGA+TGG - chr7_1:34966506-34966525 None:intergenic 35.0%
GAAGAGATTTGAGTAATGTG+AGG - chr7_1:34966546-34966565 None:intergenic 35.0%
!! AATTTTTGTTGATTGGAGGG+AGG - chr7_1:34966591-34966610 None:intergenic 35.0%
! GGGAGAGAATTTTTGTTGAT+TGG - chr7_1:34966598-34966617 None:intergenic 35.0%
GAAATTGTGGTGTGAAAAGA+TGG - chr7_1:34966673-34966692 None:intergenic 35.0%
GTAATTAAAGCAACAAGTGG+TGG - chr7_1:34966721-34966740 None:intergenic 35.0%
TCGGTAATTAAAGCAACAAG+TGG - chr7_1:34966724-34966743 None:intergenic 35.0%
! AATGAAGCTATTCAAGTTCC+AGG + chr7_1:34966889-34966908 Msa1016930:CDS 35.0%
TGATTCTCAAACGTTGCAAA+AGG + chr7_1:34966980-34966999 Msa1016930:CDS 35.0%
AAAAGGTTCAATCTTGCTGA+TGG + chr7_1:34966997-34967016 Msa1016930:CDS 35.0%
AAAGGTTCAATCTTGCTGAT+GGG + chr7_1:34966998-34967017 Msa1016930:CDS 35.0%
GGAAAATACAATGAAAGCCT+TGG + chr7_1:34967050-34967069 Msa1016930:CDS 35.0%
TGGGACCCATTATTCAAAAT+GGG + chr7_1:34967100-34967119 Msa1016930:CDS 35.0%
! CAGATTTAGAGTGTTTGAAG+TGG + chr7_1:34967157-34967176 Msa1016930:CDS 35.0%
TTGTATGTTTCATTTGGGAG+TGG + chr7_1:34967207-34967226 Msa1016930:CDS 35.0%
!! TAATGAGTTAGCTTTAGGGT+TGG + chr7_1:34967254-34967273 Msa1016930:CDS 35.0%
GCTTCATTTGATGAATCACT+AGG - chr7_1:34967318-34967337 None:intergenic 35.0%
!! GTGCTCTCTAAAAAACCTTT+TGG - chr7_1:34967384-34967403 None:intergenic 35.0%
!!! GGTTTTTTAGAGAGCACTAA+AGG + chr7_1:34967387-34967406 Msa1016930:CDS 35.0%
TGGCTCAAAATTTGTGTTTG+AGG - chr7_1:34967441-34967460 None:intergenic 35.0%
! CAAACACAAATTTTGAGCCA+TGG + chr7_1:34967441-34967460 Msa1016930:CDS 35.0%
!! CATTTTTGACTCATTGTGGT+TGG + chr7_1:34967475-34967494 Msa1016930:CDS 35.0%
AAGGAAATGTGATTAGGGAA+AGG + chr7_1:34967688-34967707 Msa1016930:CDS 35.0%
GTTGATGCATTGAAAGAAGA+TGG + chr7_1:34967735-34967754 Msa1016930:CDS 35.0%
AAATTGGCAAATTGCCATAG+TGG - chr7_1:34967766-34967785 None:intergenic 35.0%
ACTATGGCAATTTGCCAATT+TGG + chr7_1:34967765-34967784 Msa1016930:CDS 35.0%
! ATTCTATGATGGAAGCTTGG+TGG - chr7_1:34966441-34966460 None:intergenic 40.0%
TGGTTATGTGGAAGTGATTG+TGG - chr7_1:34966486-34966505 None:intergenic 40.0%
CCATTAATAGGTACACAACC+TGG - chr7_1:34966910-34966929 None:intergenic 40.0%
CCAGGTTGTGTACCTATTAA+TGG + chr7_1:34966907-34966926 Msa1016930:CDS 40.0%
GACCGATCTTGAAAATGTTC+AGG - chr7_1:34966943-34966962 None:intergenic 40.0%
!!! CAATCTTGCTGATGGGTTTT+TGG + chr7_1:34967005-34967024 Msa1016930:CDS 40.0%
GTGGGACCCATTATTCAAAA+TGG + chr7_1:34967099-34967118 Msa1016930:CDS 40.0%
TATGTTTCATTTGGGAGTGG+CGG + chr7_1:34967210-34967229 Msa1016930:CDS 40.0%
!! GCTTTAGGGTTGGAATTAAG+TGG + chr7_1:34967264-34967283 Msa1016930:CDS 40.0%
!! TTAGAGAGCACTAAAGGACA+AGG + chr7_1:34967393-34967412 Msa1016930:CDS 40.0%
! ATTTTGAGCCATGGGTCAAT+TGG + chr7_1:34967450-34967469 Msa1016930:CDS 40.0%
AAAATGCACCAATTGACCCA+TGG - chr7_1:34967461-34967480 None:intergenic 40.0%
!! GGTGCATTTTTGACTCATTG+TGG + chr7_1:34967471-34967490 Msa1016930:CDS 40.0%
!! AGTTCTTGAGAGTGTTGTGT+TGG + chr7_1:34967503-34967522 Msa1016930:CDS 40.0%
!! GTTCTTGAGAGTGTTGTGTT+GGG + chr7_1:34967504-34967523 Msa1016930:CDS 40.0%
AACAAAGGCCAAGCAATCAT+TGG - chr7_1:34967534-34967553 None:intergenic 40.0%
ATGGAGTTAAGGTTGCAATG+AGG + chr7_1:34967589-34967608 Msa1016930:CDS 40.0%
AGGTTAAAGTTCAATGAGGG+TGG + chr7_1:34967609-34967628 Msa1016930:CDS 40.0%
GGTTAAAGTTCAATGAGGGT+GGG + chr7_1:34967610-34967629 Msa1016930:CDS 40.0%
TGGCAGAGATGAAATTGCTA+AGG + chr7_1:34967638-34967657 Msa1016930:CDS 40.0%
CAGAGATGAAATTGCTAAGG+TGG + chr7_1:34967641-34967660 Msa1016930:CDS 40.0%
!! GGTGGTTAAAGAGTTGATGT+TGG + chr7_1:34967659-34967678 Msa1016930:CDS 40.0%
!! GAGTTGATGTTGGATGATGA+AGG + chr7_1:34967669-34967688 Msa1016930:CDS 40.0%
! ATTCTATGATGGAAGCTTGG+TGG - chr7_1:34966441-34966460 None:intergenic 40.0%
TGGTTATGTGGAAGTGATTG+TGG - chr7_1:34966486-34966505 None:intergenic 40.0%
CCATTAATAGGTACACAACC+TGG - chr7_1:34966910-34966929 None:intergenic 40.0%
CCAGGTTGTGTACCTATTAA+TGG + chr7_1:34966907-34966926 Msa1016930:CDS 40.0%
GACCGATCTTGAAAATGTTC+AGG - chr7_1:34966943-34966962 None:intergenic 40.0%
!!! CAATCTTGCTGATGGGTTTT+TGG + chr7_1:34967005-34967024 Msa1016930:CDS 40.0%
GTGGGACCCATTATTCAAAA+TGG + chr7_1:34967099-34967118 Msa1016930:CDS 40.0%
TATGTTTCATTTGGGAGTGG+CGG + chr7_1:34967210-34967229 Msa1016930:CDS 40.0%
!! GCTTTAGGGTTGGAATTAAG+TGG + chr7_1:34967264-34967283 Msa1016930:CDS 40.0%
!! TTAGAGAGCACTAAAGGACA+AGG + chr7_1:34967393-34967412 Msa1016930:CDS 40.0%
! ATTTTGAGCCATGGGTCAAT+TGG + chr7_1:34967450-34967469 Msa1016930:CDS 40.0%
AAAATGCACCAATTGACCCA+TGG - chr7_1:34967461-34967480 None:intergenic 40.0%
!! GGTGCATTTTTGACTCATTG+TGG + chr7_1:34967471-34967490 Msa1016930:CDS 40.0%
!! AGTTCTTGAGAGTGTTGTGT+TGG + chr7_1:34967503-34967522 Msa1016930:CDS 40.0%
!! GTTCTTGAGAGTGTTGTGTT+GGG + chr7_1:34967504-34967523 Msa1016930:CDS 40.0%
AACAAAGGCCAAGCAATCAT+TGG - chr7_1:34967534-34967553 None:intergenic 40.0%
ATGGAGTTAAGGTTGCAATG+AGG + chr7_1:34967589-34967608 Msa1016930:CDS 40.0%
AGGTTAAAGTTCAATGAGGG+TGG + chr7_1:34967609-34967628 Msa1016930:CDS 40.0%
GGTTAAAGTTCAATGAGGGT+GGG + chr7_1:34967610-34967629 Msa1016930:CDS 40.0%
TGGCAGAGATGAAATTGCTA+AGG + chr7_1:34967638-34967657 Msa1016930:CDS 40.0%
CAGAGATGAAATTGCTAAGG+TGG + chr7_1:34967641-34967660 Msa1016930:CDS 40.0%
!! GGTGGTTAAAGAGTTGATGT+TGG + chr7_1:34967659-34967678 Msa1016930:CDS 40.0%
!! GAGTTGATGTTGGATGATGA+AGG + chr7_1:34967669-34967688 Msa1016930:CDS 40.0%
GGAGAGGTGAATCTATGGTA+GGG - chr7_1:34966516-34966535 None:intergenic 45.0%
TGAGTAATGTGAGGGTTGCT+GGG - chr7_1:34966537-34966556 None:intergenic 45.0%
TTGAGTAATGTGAGGGTTGC+TGG - chr7_1:34966538-34966557 None:intergenic 45.0%
! CTGCTGGAGAGAGATTTTGT+GGG - chr7_1:34966618-34966637 None:intergenic 45.0%
! ACTGCTGGAGAGAGATTTTG+TGG - chr7_1:34966619-34966638 None:intergenic 45.0%
GTGAGACTGCTAGTTGGATT+TGG - chr7_1:34966642-34966661 None:intergenic 45.0%
TGGATTGTGAGACTGCTAGT+TGG - chr7_1:34966648-34966667 None:intergenic 45.0%
TGTGGTGTGAAAAGATGGCA+TGG - chr7_1:34966668-34966687 None:intergenic 45.0%
TGATTCGTTTGCGAACGGAT+CGG - chr7_1:34966743-34966762 None:intergenic 45.0%
TCGAGTGATTCGTTTGCGAA+CGG - chr7_1:34966748-34966767 None:intergenic 45.0%
! AGAGTGTCATTGCTGAAGGA+GGG - chr7_1:34966810-34966829 None:intergenic 45.0%
!! AGTGAGAGTGTCATTGCTGA+AGG - chr7_1:34966814-34966833 None:intergenic 45.0%
! TGTGTTTGAGGTGCCCAATT+AGG - chr7_1:34967429-34967448 None:intergenic 45.0%
!! TTCAATGAGGGTGGGTTAGT+TGG + chr7_1:34967618-34967637 Msa1016930:CDS 45.0%
TTGGCAAATTGCCATAGTGG+AGG - chr7_1:34967763-34967782 None:intergenic 45.0%
GGAGAGGTGAATCTATGGTA+GGG - chr7_1:34966516-34966535 None:intergenic 45.0%
TGAGTAATGTGAGGGTTGCT+GGG - chr7_1:34966537-34966556 None:intergenic 45.0%
TTGAGTAATGTGAGGGTTGC+TGG - chr7_1:34966538-34966557 None:intergenic 45.0%
! CTGCTGGAGAGAGATTTTGT+GGG - chr7_1:34966618-34966637 None:intergenic 45.0%
! ACTGCTGGAGAGAGATTTTG+TGG - chr7_1:34966619-34966638 None:intergenic 45.0%
GTGAGACTGCTAGTTGGATT+TGG - chr7_1:34966642-34966661 None:intergenic 45.0%
TGGATTGTGAGACTGCTAGT+TGG - chr7_1:34966648-34966667 None:intergenic 45.0%
TGTGGTGTGAAAAGATGGCA+TGG - chr7_1:34966668-34966687 None:intergenic 45.0%
TGATTCGTTTGCGAACGGAT+CGG - chr7_1:34966743-34966762 None:intergenic 45.0%
TCGAGTGATTCGTTTGCGAA+CGG - chr7_1:34966748-34966767 None:intergenic 45.0%
! AGAGTGTCATTGCTGAAGGA+GGG - chr7_1:34966810-34966829 None:intergenic 45.0%
!! AGTGAGAGTGTCATTGCTGA+AGG - chr7_1:34966814-34966833 None:intergenic 45.0%
! TGTGTTTGAGGTGCCCAATT+AGG - chr7_1:34967429-34967448 None:intergenic 45.0%
!! TTCAATGAGGGTGGGTTAGT+TGG + chr7_1:34967618-34967637 Msa1016930:CDS 45.0%
TTGGCAAATTGCCATAGTGG+AGG - chr7_1:34967763-34967782 None:intergenic 45.0%
! AAGCTTGGTGGCTGAATGCT+GGG - chr7_1:34966429-34966448 None:intergenic 50.0%
GGGAGAGGTGAATCTATGGT+AGG - chr7_1:34966517-34966536 None:intergenic 50.0%
TGCTGGGAGAGGTGAATCTA+TGG - chr7_1:34966521-34966540 None:intergenic 50.0%
! GATTGGAGGGAGGAAAGTGT+AGG - chr7_1:34966581-34966600 None:intergenic 50.0%
GCTAGTTGGATTTGGACTGC+TGG - chr7_1:34966634-34966653 None:intergenic 50.0%
!! GAGAGTGTCATTGCTGAAGG+AGG - chr7_1:34966811-34966830 None:intergenic 50.0%
TGGGTGTGCCAATGATTGCT+TGG + chr7_1:34967523-34967542 Msa1016930:CDS 50.0%
AGAAGATGGGTCCTCCACTA+TGG + chr7_1:34967749-34967768 Msa1016930:CDS 50.0%
! AAGCTTGGTGGCTGAATGCT+GGG - chr7_1:34966429-34966448 None:intergenic 50.0%
GGGAGAGGTGAATCTATGGT+AGG - chr7_1:34966517-34966536 None:intergenic 50.0%
TGCTGGGAGAGGTGAATCTA+TGG - chr7_1:34966521-34966540 None:intergenic 50.0%
! GATTGGAGGGAGGAAAGTGT+AGG - chr7_1:34966581-34966600 None:intergenic 50.0%
GCTAGTTGGATTTGGACTGC+TGG - chr7_1:34966634-34966653 None:intergenic 50.0%
!! GAGAGTGTCATTGCTGAAGG+AGG - chr7_1:34966811-34966830 None:intergenic 50.0%
TGGGTGTGCCAATGATTGCT+TGG + chr7_1:34967523-34967542 Msa1016930:CDS 50.0%
AGAAGATGGGTCCTCCACTA+TGG + chr7_1:34967749-34967768 Msa1016930:CDS 50.0%
! GAAGCTTGGTGGCTGAATGC+TGG - chr7_1:34966430-34966449 None:intergenic 55.0%
AATGTGAGGGTTGCTGGGAG+AGG - chr7_1:34966532-34966551 None:intergenic 55.0%
! GAAGCTTGGTGGCTGAATGC+TGG - chr7_1:34966430-34966449 None:intergenic 55.0%
AATGTGAGGGTTGCTGGGAG+AGG - chr7_1:34966532-34966551 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 34966391 34967821 34966391 ID=Msa1016930;Name=Msa1016930
chr7_1 mRNA 34966391 34967821 34966391 ID=Msa1016930-mRNA-1;Parent=Msa1016930;Name=Msa1016930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|476
chr7_1 exon 34966391 34967821 34966391 ID=Msa1016930-mRNA-1:exon:6690;Parent=Msa1016930-mRNA-1
chr7_1 CDS 34966391 34967821 34966391 ID=Msa1016930-mRNA-1:cds;Parent=Msa1016930-mRNA-1
Gene Sequence

>Msa1016930

ATGGCCAAAACAATTCATATAGCAGCAATTTCAATCCCAGCATTCAGCCACCAAGCTTCCATCATAGAATTTTGCAAGAAACTCATTCATCACCACAATCACTTCCACATAACCATCATATTCCCTACCATAGATTCACCTCTCCCAGCAACCCTCACATTACTCAAATCTCTTCCTTCAAATATTACCTACACTTTCCTCCCTCCAATCAACAAAAATTCTCTCCCACAAAATCTCTCTCCAGCAGTCCAAATCCAACTAGCAGTCTCACAATCCATGCCATCTTTTCACACCACAATTTCTTCACTTTGTTCATCATCAACAACACCACCACTTGTTGCTTTAATTACCGATCCGTTCGCAAACGAATCACTCGAAGTAGCAAAAGAATTCAACCTCTTATCTTATATATATTTCCCTCCTTCAGCAATGACACTCTCACTTTTCATCCATTTTCCAAAACTTCATGAAGAAATTTCATGTGAATTTAGAGATCACAATGAAGCTATTCAAGTTCCAGGTTGTGTACCTATTAATGGTATTGATTTACCTGAACATTTTCAAGATCGGTCTAGTCTTGCTTATGATTTGATTCTCAAACGTTGCAAAAGGTTCAATCTTGCTGATGGGTTTTTGGTTAACAGTTTCTTGAAAATGGAGGAAAATACAATGAAAGCCTTGGAAGAACATAATGATTCTGTTTTTCTTGTGGGACCCATTATTCAAAATGGGACAAATAATGAAACAAAAGTTTCAGATTCAGATTCAGATTTAGAGTGTTTGAAGTGGTTGAAAAATCAAAGTACTAATTCTGTTTTGTATGTTTCATTTGGGAGTGGCGGAACACTTTCTCAAGAACAAGTTAATGAGTTAGCTTTAGGGTTGGAATTAAGTGGTCAAAAGTTTTTATGGGTTTTAAGAGTACCTAGTGATTCATCAAATGAAGCTTATCTTGGTGCTAAAACTGATGATGACCCTTTAAATTTTTTACCAAAAGGTTTTTTAGAGAGCACTAAAGGACAAGGATTAGTTGTACCTAATTGGGCACCTCAAACACAAATTTTGAGCCATGGGTCAATTGGTGCATTTTTGACTCATTGTGGTTGGAATTCAGTTCTTGAGAGTGTTGTGTTGGGTGTGCCAATGATTGCTTGGCCTTTGTTTGCTGAGCAAAAAATGAATGCTGTTTTGTTATGTGATGGAGTTAAGGTTGCAATGAGGTTAAAGTTCAATGAGGGTGGGTTAGTTGGCAGAGATGAAATTGCTAAGGTGGTTAAAGAGTTGATGTTGGATGATGAAGGAAATGTGATTAGGGAAAGGATTGAAGAGTTGAGAGATGCTGCTGTTGATGCATTGAAAGAAGATGGGTCCTCCACTATGGCAATTTGCCAATTTGGTAATAGATTGGAAAGTTACGGGACCAACTTGTAG
Protein sequence

>Msa1016930

MAKTIHIAAISIPAFSHQASIIEFCKKLIHHHNHFHITIIFPTIDSPLPATLTLLKSLPSNITYTFLPPINKNSLPQNLSPAVQIQLAVSQSMPSFHTTISSLCSSSTTPPLVALITDPFANESLEVAKEFNLLSYIYFPPSAMTLSLFIHFPKLHEEISCEFRDHNEAIQVPGCVPINGIDLPEHFQDRSSLAYDLILKRCKRFNLADGFLVNSFLKMEENTMKALEEHNDSVFLVGPIIQNGTNNETKVSDSDSDLECLKWLKNQSTNSVLYVSFGSGGTLSQEQVNELALGLELSGQKFLWVLRVPSDSSNEAYLGAKTDDDPLNFLPKGFLESTKGQGLVVPNWAPQTQILSHGSIGAFLTHCGWNSVLESVVLGVPMIAWPLFAEQKMNAVLLCDGVKVAMRLKFNEGGLVGRDEIAKVVKELMLDDEGNVIRERIEELRDAAVDALKEDGSSTMAICQFGNRLESYGTNL*