Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019210 | XP_013448517.1 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019210 | sp|Q42290|MPPB_ARATH | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019210 | A0A072TYG3 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106370 | Msa1019210 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa0231290 | Msa1019210 | 0.813244 | 2.823561e-51 | -8.615850e-47 |
| Msa1019210 | Msa1390390 | 0.815250 | 1.017726e-51 | -8.615850e-47 |
| Msa0323420 | Msa1019210 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0585000 | Msa1019210 | 0.802098 | 6.591898e-49 | -8.615850e-47 |
| Msa0865990 | Msa1019210 | 0.803614 | 3.204820e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019210 | MtrunA17_Chr7g0234701 | 98.496 | 532 | 8 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1091 |
| Msa1019210 | MtrunA17_Chr8g0340831 | 31.944 | 432 | 275 | 11 | 97 | 520 | 77 | 497 | 1.66e-59 | 205 |
| Msa1019210 | MtrunA17_Chr8g0389651 | 31.556 | 450 | 279 | 16 | 82 | 520 | 69 | 500 | 1.07e-55 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019210 | AT3G02090.1 | 75.985 | 533 | 125 | 2 | 1 | 532 | 1 | 531 | 0.0 | 856 |
| Msa1019210 | AT3G02090.2 | 75.644 | 505 | 120 | 2 | 1 | 504 | 1 | 503 | 0.0 | 803 |
| Msa1019210 | AT3G16480.1 | 30.377 | 451 | 290 | 11 | 84 | 526 | 63 | 497 | 1.21e-51 | 184 |
| Msa1019210 | AT1G51980.1 | 30.536 | 429 | 281 | 12 | 99 | 521 | 79 | 496 | 6.44e-51 | 182 |
| Msa1019210 | AT1G51980.2 | 32.021 | 381 | 243 | 11 | 99 | 473 | 79 | 449 | 2.79e-46 | 168 |
Find 191 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCCTTGGCAGAACCATTT+TGG | 0.120950 | 7_1:-40436570 | Msa1019210:CDS |
| TGTGCTCAATTTAAACTTAA+TGG | 0.136934 | 7_1:-40432967 | Msa1019210:three_prime_UTR |
| GGAAGAGGAGATTGAGAATA+TGG | 0.156727 | 7_1:-40438024 | Msa1019210:CDS |
| TATTAATTCATACAAGAATT+AGG | 0.167325 | 7_1:+40432782 | None:intergenic |
| GCCTGTTGCGTTGGATATTT+TGG | 0.171866 | 7_1:-40437931 | Msa1019210:CDS |
| AGAGTTGTGATGCGAGTTTC+AGG | 0.218151 | 7_1:+40438218 | None:intergenic |
| GTGTGGCTAGGGTTTGGTTT+TGG | 0.218584 | 7_1:+40438545 | None:intergenic |
| CGTGTGTGGTCACGGATTTC+GGG | 0.227157 | 7_1:+40438254 | None:intergenic |
| TCCTGATTCAATTGCTTTGA+TGG | 0.229373 | 7_1:-40435998 | Msa1019210:CDS |
| GACAACCAAGTTGGCTTATC+AGG | 0.231981 | 7_1:-40434784 | Msa1019210:CDS |
| GAGAAAGGGATGTTATTCTT+AGG | 0.233093 | 7_1:-40437863 | Msa1019210:CDS |
| TCGTGTGTGGTCACGGATTT+CGG | 0.234643 | 7_1:+40438253 | None:intergenic |
| ATTAATTCATACAAGAATTA+GGG | 0.264541 | 7_1:+40432783 | None:intergenic |
| CAGAAGCCAGGGTGGGGTTC+GGG | 0.279001 | 7_1:+40432730 | None:intergenic |
| GCTCATTGATTTAGTGCATT+TGG | 0.279658 | 7_1:-40432689 | Msa1019210:three_prime_UTR |
| CCGAACCCCACCCTGGCTTC+TGG | 0.289464 | 7_1:-40432729 | Msa1019210:three_prime_UTR |
| AAGACCCGTGTCCTTGTAAT+TGG | 0.292153 | 7_1:+40435761 | None:intergenic |
| GGAGGTGGTGGGGAGGGTGG+TGG | 0.296163 | 7_1:+40438377 | None:intergenic |
| TCGCTTCTGCTTCACATTGA+TGG | 0.297186 | 7_1:-40433571 | Msa1019210:CDS |
| GAGGAGGAATGCGAGGGATT+TGG | 0.298473 | 7_1:-40438045 | Msa1019210:CDS |
| GGTGGGGAGGGTGGTGGTGA+AGG | 0.304949 | 7_1:+40438383 | None:intergenic |
| GGGGAGGGTGGTGGTGAAGG+GGG | 0.312045 | 7_1:+40438386 | None:intergenic |
| GTGGGGAGGGTGGTGGTGAA+GGG | 0.312073 | 7_1:+40438384 | None:intergenic |
| TGCAAGCAATGCTGGGTTCT+TGG | 0.313082 | 7_1:-40435972 | Msa1019210:CDS |
| GACGGGAGCGGCGGCGGAGG+TGG | 0.314689 | 7_1:+40438418 | None:intergenic |
| TGGGGAGGGTGGTGGTGAAG+GGG | 0.316679 | 7_1:+40438385 | None:intergenic |
| CCAGAAGCCAGGGTGGGGTT+CGG | 0.319072 | 7_1:+40432729 | None:intergenic |
| TTGGGAGGTGGTGGGGAGGG+TGG | 0.321178 | 7_1:+40438374 | None:intergenic |
| AGGTCATCCAGAGGCATATA+TGG | 0.333653 | 7_1:+40432913 | None:intergenic |
| CAAAGATCACTTCCTCTGTT+TGG | 0.333829 | 7_1:+40436624 | None:intergenic |
| TGGTCACGGATTTCGGGTTT+AGG | 0.334517 | 7_1:+40438260 | None:intergenic |
| GGACTGCAACCGTTGGGGTT+TGG | 0.365755 | 7_1:-40438151 | Msa1019210:CDS |
| GGGTGAGCGGGTGACGGGAG+CGG | 0.367676 | 7_1:+40438406 | None:intergenic |
| GGTGACGGGAGCGGCGGCGG+AGG | 0.367862 | 7_1:+40438415 | None:intergenic |
| TTTAAACTTAATGGAATGTC+TGG | 0.369437 | 7_1:-40432958 | Msa1019210:three_prime_UTR |
| GGATGTTATTCTTAGGGAAA+TGG | 0.373559 | 7_1:-40437856 | Msa1019210:CDS |
| GACGTTGGGAGGTGGTGGGG+AGG | 0.374232 | 7_1:+40438370 | None:intergenic |
| GATCCACGTTTCCTCAAATT+CGG | 0.382243 | 7_1:-40438287 | Msa1019210:CDS |
| TTACCTTGTCATAAATAAAT+CGG | 0.386383 | 7_1:+40433173 | None:intergenic |
| AGGGCTGCCCGTGTGTGGCT+AGG | 0.390791 | 7_1:+40438533 | None:intergenic |
| TGCAACACGTTTAATTGTAC+TGG | 0.394685 | 7_1:+40433198 | None:intergenic |
| CTAGCAAACAATTCAGCAAA+TGG | 0.400249 | 7_1:+40433238 | None:intergenic |
| CGTCTGAACCAGTTGTAATC+AGG | 0.402332 | 7_1:+40433028 | None:intergenic |
| GATGGTCATGCAAGCAATGC+TGG | 0.404594 | 7_1:-40435980 | Msa1019210:CDS |
| GTGGCGACACGGAGTCCGTT+AGG | 0.407403 | 7_1:+40438194 | None:intergenic |
| ATTCAAAGTTTGATGAGAAT+CGG | 0.408002 | 7_1:-40437893 | Msa1019210:CDS |
| GCCCGTGTGTGGCTAGGGTT+TGG | 0.412591 | 7_1:+40438539 | None:intergenic |
| GCGGGTGACGGGAGCGGCGG+CGG | 0.412893 | 7_1:+40438412 | None:intergenic |
| ATCATGACGTTGGGAGGTGG+TGG | 0.412968 | 7_1:+40438365 | None:intergenic |
| ACCATCAAAGCAATTGAATC+AGG | 0.413135 | 7_1:+40435997 | None:intergenic |
| TTGTTTCAGCTACTCACATA+TGG | 0.414073 | 7_1:-40433271 | Msa1019210:intron |
| GCTCAAGGACTGCAACCGTT+GGG | 0.419312 | 7_1:-40438157 | Msa1019210:CDS |
| AATTTGAGGAAACGTGGATC+TGG | 0.422726 | 7_1:+40438290 | None:intergenic |
| AGCGTTTACCTGATTACAAC+TGG | 0.423477 | 7_1:-40433036 | Msa1019210:CDS |
| AGCAACTCAGTTGGTTGAAA+AGG | 0.424795 | 7_1:-40436211 | Msa1019210:CDS |
| TAATCAGGTAAACGCTGAAT+AGG | 0.429534 | 7_1:+40433043 | None:intergenic |
| AGCAGGAGGTGGAAAACATA+TGG | 0.431282 | 7_1:-40435941 | Msa1019210:CDS |
| TTCAAGGTGATAGCTGCATC+TGG | 0.431989 | 7_1:-40436306 | Msa1019210:intron |
| CTCAAAAGAGACCAGAAGCC+AGG | 0.433705 | 7_1:+40432718 | None:intergenic |
| GTTCTGAGCAGGTCCCAAAA+TGG | 0.434416 | 7_1:+40436556 | None:intergenic |
| GCCAAAATATCCAACGCAAC+AGG | 0.437846 | 7_1:+40437930 | None:intergenic |
| GTGCTCTCAGCCGGACTGCT+TGG | 0.443674 | 7_1:-40434835 | Msa1019210:intron |
| AGCTGAAGATATTGGTCGTC+AGG | 0.444449 | 7_1:-40433536 | Msa1019210:intron |
| AGAAAGGGATGTTATTCTTA+GGG | 0.445881 | 7_1:-40437862 | Msa1019210:CDS |
| TGAGCGGGTGACGGGAGCGG+CGG | 0.448148 | 7_1:+40438409 | None:intergenic |
| CGACCAATATCTTCAGCTAC+AGG | 0.448715 | 7_1:+40433541 | None:intergenic |
| GTTGGGGTTTGGATCGATGC+CGG | 0.450933 | 7_1:-40438140 | Msa1019210:CDS |
| TGCATTGCCCTAAAATTGCT+TGG | 0.456703 | 7_1:-40432758 | Msa1019210:three_prime_UTR |
| TTGGGGTTTGGATCGATGCC+GGG | 0.457499 | 7_1:-40438139 | Msa1019210:CDS |
| GGGCTGCCCGTGTGTGGCTA+GGG | 0.459684 | 7_1:+40438534 | None:intergenic |
| GGATCGGATTGAGGTGAGGA+TGG | 0.465121 | 7_1:+40438451 | None:intergenic |
| GGTTCAGACGCAGAACCTAC+TGG | 0.465267 | 7_1:-40433015 | Msa1019210:CDS |
| TGCCTCTGGATGACCTGTTT+AGG | 0.466230 | 7_1:-40432906 | Msa1019210:three_prime_UTR |
| TATTCCTCTTGCACAATTTG+CGG | 0.470822 | 7_1:-40436049 | Msa1019210:CDS |
| AGGTGAGGATGGGTGTCCGC+CGG | 0.475309 | 7_1:+40438462 | None:intergenic |
| TAGCAAACAATTCAGCAAAT+GGG | 0.475811 | 7_1:+40433239 | None:intergenic |
| TTCTGCCAAGGGGAGTGTAC+TGG | 0.482436 | 7_1:+40436579 | None:intergenic |
| GAAGAGGAGATTGAGAATAT+GGG | 0.483391 | 7_1:-40438023 | Msa1019210:CDS |
| GCTGTTGTCAGTGATGTAAA+TGG | 0.483428 | 7_1:-40432821 | Msa1019210:three_prime_UTR |
| TGTTACGCGTGCTCGCAATC+AGG | 0.484599 | 7_1:-40434748 | Msa1019210:intron |
| ATGTACTCCATATATGCCTC+TGG | 0.485742 | 7_1:-40432920 | Msa1019210:three_prime_UTR |
| AGCCCTGTAGCTGAAGATAT+TGG | 0.489455 | 7_1:-40433544 | Msa1019210:CDS |
| GCAGGAGGTGGAAAACATAT+GGG | 0.492326 | 7_1:-40435940 | Msa1019210:CDS |
| GAATGCGAGGGATTTGGAAG+AGG | 0.493011 | 7_1:-40438039 | Msa1019210:CDS |
| TGGGTGTCCGCCGGGATGAA+CGG | 0.493856 | 7_1:+40438471 | None:intergenic |
| AAAACGATGAAATAGAGAAA+GGG | 0.495584 | 7_1:+40438594 | None:intergenic |
| GTTTCTCCCGAACCCCACCC+TGG | 0.495802 | 7_1:-40432736 | Msa1019210:three_prime_UTR |
| ACGTTGGGAGGTGGTGGGGA+GGG | 0.495958 | 7_1:+40438371 | None:intergenic |
| GGCTTTCAACACCAATTACA+AGG | 0.496777 | 7_1:-40435772 | Msa1019210:CDS |
| GTTTAGGTGAACCGAATTTG+AGG | 0.498343 | 7_1:+40438276 | None:intergenic |
| CCGGGATGAACGGCGTACTA+AGG | 0.501042 | 7_1:+40438481 | None:intergenic |
| GGATGTTGCTATTGCTGCCA+TGG | 0.504114 | 7_1:-40433068 | Msa1019210:CDS |
| ATTGTCTTAATGTTCTGAGC+AGG | 0.507414 | 7_1:+40436545 | None:intergenic |
| GACAGATCATCCAAGCAGTC+CGG | 0.513338 | 7_1:+40434825 | None:intergenic |
| CGATCGTAGATCATGACGTT+GGG | 0.514475 | 7_1:+40438356 | None:intergenic |
| AGAATCGGATTAGTCGAGAA+AGG | 0.515768 | 7_1:-40437878 | Msa1019210:CDS |
| TGGAATAAGACAGCAGGAGG+TGG | 0.516513 | 7_1:-40435952 | Msa1019210:CDS |
| GTAATCCTGTAGATGAGCTT+TGG | 0.516737 | 7_1:+40436520 | None:intergenic |
| AGAGGATTCGTGTGTGGTCA+CGG | 0.519419 | 7_1:+40438246 | None:intergenic |
| GTTTATCTACATACCATCCT+AGG | 0.523412 | 7_1:+40436476 | None:intergenic |
| TTCAACCAACTGAGTTGCTG+TGG | 0.525634 | 7_1:+40436215 | None:intergenic |
| GAGAGTGGCGGATCGGATTG+AGG | 0.526317 | 7_1:+40438442 | None:intergenic |
| AGCTCAAGGACTGCAACCGT+TGG | 0.526948 | 7_1:-40438158 | Msa1019210:CDS |
| GGTGAGGATGGGTGTCCGCC+GGG | 0.528419 | 7_1:+40438463 | None:intergenic |
| TGGCGACACGGAGTCCGTTA+GGG | 0.529967 | 7_1:+40438195 | None:intergenic |
| AGAGACCAGAAGCCAGGGTG+GGG | 0.532899 | 7_1:+40432724 | None:intergenic |
| CATGACGTTGGGAGGTGGTG+GGG | 0.534340 | 7_1:+40438367 | None:intergenic |
| GGTGGGATTTGTTGACAACT+TGG | 0.537207 | 7_1:+40436236 | None:intergenic |
| TATTCTTAGGGAAATGGAAG+AGG | 0.540857 | 7_1:-40437850 | Msa1019210:intron |
| AATCACCAAAGCTCATCTAC+AGG | 0.542257 | 7_1:-40436525 | Msa1019210:CDS |
| TCCCAAAATGGTTCTGCCAA+GGG | 0.542944 | 7_1:+40436568 | None:intergenic |
| AATGTATGAGACAACCAAGT+TGG | 0.550313 | 7_1:-40434793 | Msa1019210:CDS |
| TGGTGTTTATGCTGTCGCTA+AGG | 0.550888 | 7_1:-40435736 | Msa1019210:intron |
| TCATGACGTTGGGAGGTGGT+GGG | 0.552408 | 7_1:+40438366 | None:intergenic |
| GATCGGATTGAGGTGAGGAT+GGG | 0.552930 | 7_1:+40438452 | None:intergenic |
| AACCAAACCCTAGCCACACA+CGG | 0.554908 | 7_1:-40438541 | Msa1019210:five_prime_UTR |
| CTCCGTCTCGAATCTCGACC+CGG | 0.559778 | 7_1:+40438121 | None:intergenic |
| TGAAACCTGATAAGCCAACT+TGG | 0.560316 | 7_1:+40434779 | None:intergenic |
| GCTACCGCAAATTGTGCAAG+AGG | 0.561891 | 7_1:+40436045 | None:intergenic |
| GTTGATCGTCATGGTGGAGA+GGG | 0.562655 | 7_1:+40438514 | None:intergenic |
| TGAAGTTGCAGAAAGCATGA+TGG | 0.563113 | 7_1:-40435793 | Msa1019210:CDS |
| AGACACATTACACTGCTCCT+AGG | 0.563685 | 7_1:-40436493 | Msa1019210:CDS |
| GGACGGAGAGGAGGAATGCG+AGG | 0.564393 | 7_1:-40438052 | Msa1019210:CDS |
| TCGTAGATCATGACGTTGGG+AGG | 0.564669 | 7_1:+40438359 | None:intergenic |
| GACAAAGTCTATAGCACACT+CGG | 0.565204 | 7_1:-40438639 | Msa1019210:five_prime_UTR |
| GAATCGGATTAGTCGAGAAA+GGG | 0.565651 | 7_1:-40437877 | Msa1019210:CDS |
| GTCCCAAAATGGTTCTGCCA+AGG | 0.566241 | 7_1:+40436567 | None:intergenic |
| GGCTAGACTCCGTGGCGACA+CGG | 0.568095 | 7_1:+40438183 | None:intergenic |
| CGGTTGCAGTCCTTGAGCTA+AGG | 0.568745 | 7_1:+40438162 | None:intergenic |
| TAGATCATGACGTTGGGAGG+TGG | 0.569522 | 7_1:+40438362 | None:intergenic |
| CAACACCAATTACAAGGACA+CGG | 0.571137 | 7_1:-40435766 | Msa1019210:CDS |
| CTCAAGGACTGCAACCGTTG+GGG | 0.571364 | 7_1:-40438156 | Msa1019210:CDS |
| TGTTGATCGTCATGGTGGAG+AGG | 0.571806 | 7_1:+40438513 | None:intergenic |
| AGGGGATGTGCCTGTTGCGT+TGG | 0.572773 | 7_1:-40437940 | Msa1019210:CDS |
| ACTGGAAAGCGGTTGCGTGT+AGG | 0.574119 | 7_1:+40436597 | None:intergenic |
| ATGGTCATGCAAGCAATGCT+GGG | 0.578859 | 7_1:-40435979 | Msa1019210:CDS |
| GGCGGCGGAGGTGGAGAGAG+TGG | 0.579024 | 7_1:+40438427 | None:intergenic |
| TTCGAGACGGAGGAGAGTAA+TGG | 0.579054 | 7_1:-40438110 | Msa1019210:CDS |
| GTTGGCTTATCAGGTTTCAG+AGG | 0.585578 | 7_1:-40434775 | Msa1019210:CDS |
| GCTTTCCAGTACACTCCCCT+TGG | 0.586622 | 7_1:-40436584 | Msa1019210:CDS |
| GGTTCTTGGAATAAGACAGC+AGG | 0.587947 | 7_1:-40435958 | Msa1019210:CDS |
| TGGAGAGGGCTGCCCGTGTG+TGG | 0.596123 | 7_1:+40438528 | None:intergenic |
| TCAAAAGAGACCAGAAGCCA+GGG | 0.597227 | 7_1:+40432719 | None:intergenic |
| GGAAAGCGGTTGCGTGTAGG+TGG | 0.597858 | 7_1:+40436600 | None:intergenic |
| GAGGAGATTGAGAATATGGG+TGG | 0.598135 | 7_1:-40438020 | Msa1019210:CDS |
| GCGATCGTAGATCATGACGT+TGG | 0.600048 | 7_1:+40438355 | None:intergenic |
| TAACGGACTCCGTGTCGCCA+CGG | 0.602370 | 7_1:-40438192 | Msa1019210:CDS |
| TTATGCGAAGGTTTCGCAAG+GGG | 0.603037 | 7_1:-40437958 | Msa1019210:CDS |
| GATGTTGCTATTGCTGCCAT+GGG | 0.603073 | 7_1:-40433067 | Msa1019210:CDS |
| AACCAACTGAGTTGCTGTGG+TGG | 0.603366 | 7_1:+40436218 | None:intergenic |
| TCTGAGCTAGCACAGCGAGT+TGG | 0.603978 | 7_1:-40435822 | Msa1019210:CDS |
| ACAGACTACTTATTATGCGA+AGG | 0.604699 | 7_1:-40437970 | Msa1019210:CDS |
| AGGTGGAGAGAGTGGCGGAT+CGG | 0.604875 | 7_1:+40438435 | None:intergenic |
| ACCAAACCCTAGCCACACAC+GGG | 0.605404 | 7_1:-40438540 | Msa1019210:five_prime_UTR |
| CCCAAAATGGTTCTGCCAAG+GGG | 0.606028 | 7_1:+40436569 | None:intergenic |
| AAGAGACCAGAAGCCAGGGT+GGG | 0.607011 | 7_1:+40432723 | None:intergenic |
| ACCAACTGAGTTGCTGTGGT+GGG | 0.607905 | 7_1:+40436219 | None:intergenic |
| GAACTAATAGCGGTTCCAGT+AGG | 0.607907 | 7_1:+40433000 | None:intergenic |
| ACATTACACTGCTCCTAGGA+TGG | 0.609322 | 7_1:-40436489 | Msa1019210:intron |
| AGGAGATTGAGAATATGGGT+GGG | 0.612564 | 7_1:-40438019 | Msa1019210:CDS |
| CGCATCACAACTCTCCCTAA+CGG | 0.612727 | 7_1:-40438209 | Msa1019210:CDS |
| AAACCGATTTATTTATGACA+AGG | 0.619571 | 7_1:-40433176 | Msa1019210:intron |
| TCCCACCACAGCAACTCAGT+TGG | 0.620192 | 7_1:-40436220 | Msa1019210:CDS |
| TTAATTCATACAAGAATTAG+GGG | 0.621257 | 7_1:+40432784 | None:intergenic |
| AACACCAATTACAAGGACAC+GGG | 0.626009 | 7_1:-40435765 | Msa1019210:CDS |
| GACGGAGAGGAGGAATGCGA+GGG | 0.628316 | 7_1:-40438051 | Msa1019210:CDS |
| GAGGAGTTTGTTGATCGTCA+TGG | 0.629405 | 7_1:+40438505 | None:intergenic |
| TATTATGCGAAGGTTTCGCA+AGG | 0.632397 | 7_1:-40437960 | Msa1019210:CDS |
| ATTATGCGAAGGTTTCGCAA+GGG | 0.640045 | 7_1:-40437959 | Msa1019210:CDS |
| TGGCGGATCGGATTGAGGTG+AGG | 0.641489 | 7_1:+40438447 | None:intergenic |
| GACCAATATCTTCAGCTACA+GGG | 0.642469 | 7_1:+40433542 | None:intergenic |
| AAACTAAGATGAACTAATAG+CGG | 0.642849 | 7_1:+40432990 | None:intergenic |
| TAAACGCTGAATAGGTCCCA+TGG | 0.648283 | 7_1:+40433051 | None:intergenic |
| AAAGAGACCAGAAGCCAGGG+TGG | 0.649646 | 7_1:+40432722 | None:intergenic |
| TCTTGGAATAAGACAGCAGG+AGG | 0.652697 | 7_1:-40435955 | Msa1019210:CDS |
| AAGGGGAGTGTACTGGAAAG+CGG | 0.657512 | 7_1:+40436586 | None:intergenic |
| TGCCGGGTCGAGATTCGAGA+CGG | 0.661007 | 7_1:-40438123 | Msa1019210:CDS |
| GGCGGAGGTGGAGAGAGTGG+CGG | 0.661351 | 7_1:+40438430 | None:intergenic |
| GAGCGGAGAGGATTCGTGTG+TGG | 0.666040 | 7_1:+40438240 | None:intergenic |
| TGCGAGTTTCAGGAGCGGAG+AGG | 0.669751 | 7_1:+40438228 | None:intergenic |
| GGCATCGATCCAAACCCCAA+CGG | 0.672185 | 7_1:+40438142 | None:intergenic |
| TGTGATGCGAGTTTCAGGAG+CGG | 0.673954 | 7_1:+40438223 | None:intergenic |
| TGAGCTAAGGCTAGACTCCG+TGG | 0.675517 | 7_1:+40438175 | None:intergenic |
| GAACCGAATTTGAGGAAACG+TGG | 0.678087 | 7_1:+40438284 | None:intergenic |
| CAGGAGGTGGAAAACATATG+GGG | 0.678355 | 7_1:-40435939 | Msa1019210:intron |
| GTAGGTTGAGGGCCAAACAG+AGG | 0.679038 | 7_1:-40436636 | Msa1019210:intron |
| ATGAACGGCGTACTAAGGTG+AGG | 0.684383 | 7_1:+40438486 | None:intergenic |
| GAGTTTGTTGATCGTCATGG+TGG | 0.694220 | 7_1:+40438508 | None:intergenic |
| GGCCTAAACAGGTCATCCAG+AGG | 0.698405 | 7_1:+40432904 | None:intergenic |
| CGGGTCGAGATTCGAGACGG+AGG | 0.710412 | 7_1:-40438120 | Msa1019210:CDS |
| TAGTACGCCGTTCATCCCGG+CGG | 0.765579 | 7_1:-40438478 | Msa1019210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATTAAGACAAAAT+AGG | + | chr7_1:40434605-40434624 | None:intergenic | 10.0% |
| !! | TTAAATATTATAACCTATAA+TGG | - | chr7_1:40435881-40435900 | Msa1019210:intron | 10.0% |
| !!! | TAATTTTTATCATTCAAAAT+TGG | + | chr7_1:40436942-40436961 | None:intergenic | 10.0% |
| !! | TGCAAATTAAATTAATTTAT+GGG | - | chr7_1:40437050-40437069 | Msa1019210:intron | 10.0% |
| !! | AATAAGTATGAAATATTAAA+TGG | + | chr7_1:40438016-40438035 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTTATTTGTTAT+AGG | - | chr7_1:40438437-40438456 | Msa1019210:CDS | 10.0% |
| !!! | TAATTTTTTACTCATTGTAA+AGG | + | chr7_1:40434076-40434095 | None:intergenic | 15.0% |
| !!! | GAGTAAAAAATTAGATTTTA+AGG | - | chr7_1:40434083-40434102 | Msa1019210:intron | 15.0% |
| !!! | TTTTTTTTTTTGTTGTTGTA+AGG | - | chr7_1:40434146-40434165 | Msa1019210:intron | 15.0% |
| !! | ATTATTACAACAACAAATAT+CGG | + | chr7_1:40434365-40434384 | None:intergenic | 15.0% |
| !! | GTTGTTGTAATAATAATAAT+TGG | - | chr7_1:40434371-40434390 | Msa1019210:intron | 15.0% |
| !!! | GTCTTAATTTTTTATTTGTT+TGG | - | chr7_1:40434610-40434629 | Msa1019210:intron | 15.0% |
| !! | TAATATATAAATATGGAAGT+TGG | - | chr7_1:40434955-40434974 | Msa1019210:intron | 15.0% |
| !!! | TTTGAAACTATAATAGTTAA+TGG | - | chr7_1:40436167-40436186 | Msa1019210:intron | 15.0% |
| !! | GTGCAAATTAAATTAATTTA+TGG | - | chr7_1:40437049-40437068 | Msa1019210:intron | 15.0% |
| !! | GCAAATTAAATTAATTTATG+GGG | - | chr7_1:40437051-40437070 | Msa1019210:intron | 15.0% |
| !! | CAAATTAAATTAATTTATGG+GGG | - | chr7_1:40437052-40437071 | Msa1019210:intron | 15.0% |
| !! | AACAAATAAATGAAAAATGA+TGG | + | chr7_1:40438435-40438454 | None:intergenic | 15.0% |
| !! | ATTAATTCATACAAGAATTA+GGG | + | chr7_1:40438535-40438554 | None:intergenic | 15.0% |
| !! | TATTAATTCATACAAGAATT+AGG | + | chr7_1:40438536-40438555 | None:intergenic | 15.0% |
| !!! | AATTATTGCGATTTTTTTGT+GGG | - | chr7_1:40433777-40433796 | Msa1019210:intron | 20.0% |
| !!! | TATGAAAAAACAACTTTTGA+AGG | - | chr7_1:40433853-40433872 | Msa1019210:intron | 20.0% |
| !! | TTCTACACATCAAATAAAAA+AGG | + | chr7_1:40434283-40434302 | None:intergenic | 20.0% |
| !!! | GATTTCTAAATCCTTTTTAA+AGG | + | chr7_1:40434552-40434571 | None:intergenic | 20.0% |
| !!! | TAAATGATATTGCTTTTTGT+AGG | - | chr7_1:40434661-40434680 | Msa1019210:intron | 20.0% |
| !! | ATATATCAACTATATCAACA+GGG | + | chr7_1:40435194-40435213 | None:intergenic | 20.0% |
| !! | AATATATCAACTATATCAAC+AGG | + | chr7_1:40435195-40435214 | None:intergenic | 20.0% |
| !! | AGGAGAAAAGAAATTATATT+TGG | + | chr7_1:40436107-40436126 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTCAAAATTGG+TGG | + | chr7_1:40436939-40436958 | None:intergenic | 20.0% |
| !! | TTACCTTGTCATAAATAAAT+CGG | + | chr7_1:40438145-40438164 | None:intergenic | 20.0% |
| !! | TGCATAAATATTACAAAAAC+AGG | + | chr7_1:40438463-40438482 | None:intergenic | 20.0% |
| !! | TTAATTCATACAAGAATTAG+GGG | + | chr7_1:40438534-40438553 | None:intergenic | 20.0% |
| ! | AAAACGATGAAATAGAGAAA+GGG | + | chr7_1:40432724-40432743 | None:intergenic | 25.0% |
| ! | AAAAACGATGAAATAGAGAA+AGG | + | chr7_1:40432725-40432744 | None:intergenic | 25.0% |
| !!! | TTTGGAGCATATGATTTTTA+AGG | - | chr7_1:40433240-40433259 | Msa1019210:CDS | 25.0% |
| !! | TTGGAGCATATGATTTTTAA+GGG | - | chr7_1:40433241-40433260 | Msa1019210:CDS | 25.0% |
| ! | ATTCAAAGTTTGATGAGAAT+CGG | - | chr7_1:40433422-40433441 | Msa1019210:intron | 25.0% |
| !!! | GAATTATTGCGATTTTTTTG+TGG | - | chr7_1:40433776-40433795 | Msa1019210:intron | 25.0% |
| ! | CTAATTTATTTGCCCAAAAT+AGG | + | chr7_1:40433824-40433843 | None:intergenic | 25.0% |
| ! | AAAAAGGCTTCAAAATAGAA+TGG | + | chr7_1:40434267-40434286 | None:intergenic | 25.0% |
| !! | GAATGAGCTATATTTTACAT+TGG | + | chr7_1:40434484-40434503 | None:intergenic | 25.0% |
| ! | AAGTATAGTCCAATAGATAA+AGG | - | chr7_1:40434506-40434525 | Msa1019210:intron | 25.0% |
| ! | TCAACTGAGCTAAAAATTAT+TGG | + | chr7_1:40435171-40435190 | None:intergenic | 25.0% |
| !!! | AATTTTACTTTGTTGATTGG+GGG | + | chr7_1:40435424-40435443 | None:intergenic | 25.0% |
| !!! | GAATTTTACTTTGTTGATTG+GGG | + | chr7_1:40435425-40435444 | None:intergenic | 25.0% |
| !!! | GGAATTTTACTTTGTTGATT+GGG | + | chr7_1:40435426-40435445 | None:intergenic | 25.0% |
| ! | ATCCATAAGAAAACCAAATT+AGG | + | chr7_1:40435610-40435629 | None:intergenic | 25.0% |
| ! | TGTTAAACAAAGTAGTACAT+TGG | - | chr7_1:40435634-40435653 | Msa1019210:intron | 25.0% |
| ! | AAGAGGGATATATGTTAATT+TGG | + | chr7_1:40435721-40435740 | None:intergenic | 25.0% |
| ! | ATCTATGAAAAACTACAAGA+GGG | + | chr7_1:40435737-40435756 | None:intergenic | 25.0% |
| ! | TATCTATGAAAAACTACAAG+AGG | + | chr7_1:40435738-40435757 | None:intergenic | 25.0% |
| !!! | GTTGTATTTAACTTGTCAAT+CGG | - | chr7_1:40435791-40435810 | Msa1019210:CDS | 25.0% |
| ! | TATCTTCAATAGACCATTAT+AGG | + | chr7_1:40435897-40435916 | None:intergenic | 25.0% |
| ! | AGGTTATTTAACAAATTCAG+TGG | + | chr7_1:40435923-40435942 | None:intergenic | 25.0% |
| !!! | TTTTAGTTAGATTCAGTGAT+TGG | - | chr7_1:40435980-40435999 | Msa1019210:CDS | 25.0% |
| ! | AAAAATAAAGTAGAAGTCCT+TGG | + | chr7_1:40436135-40436154 | None:intergenic | 25.0% |
| ! | ATGTCTTTCTATTCAATATG+TGG | - | chr7_1:40436320-40436339 | Msa1019210:intron | 25.0% |
| ! | TTGCTAATTGAATATGACAA+TGG | - | chr7_1:40436622-40436641 | Msa1019210:CDS | 25.0% |
| ! | TTGAATATGACAATGGAATT+TGG | - | chr7_1:40436629-40436648 | Msa1019210:CDS | 25.0% |
| !! | GCTTTATATTAAGAAGCTTT+TGG | - | chr7_1:40436657-40436676 | Msa1019210:intron | 25.0% |
| !!! | CTACAGAGTTAATTTTGTTT+TGG | - | chr7_1:40436704-40436723 | Msa1019210:intron | 25.0% |
| !!! | ATTGAGGAAGTATTGAATTT+AGG | + | chr7_1:40436807-40436826 | None:intergenic | 25.0% |
| ! | AGTAACTAAGAATTAGATTG+AGG | + | chr7_1:40436823-40436842 | None:intergenic | 25.0% |
| !!! | GTTACTAGTTTCTTTAAGAT+AGG | - | chr7_1:40436837-40436856 | Msa1019210:intron | 25.0% |
| !! | ATTTATGATGCCATATTTTG+TGG | - | chr7_1:40437004-40437023 | Msa1019210:intron | 25.0% |
| ! | TAAAGAAAGACCACAAAATA+TGG | + | chr7_1:40437017-40437036 | None:intergenic | 25.0% |
| ! | ACTATGACATGAAAAATGTA+AGG | + | chr7_1:40437320-40437339 | None:intergenic | 25.0% |
| !!! | GGTAAGCATTTTAACTAAAT+TGG | + | chr7_1:40437409-40437428 | None:intergenic | 25.0% |
| ! | CATTCAAACTAAATTTGTGA+TGG | - | chr7_1:40437487-40437506 | Msa1019210:intron | 25.0% |
| ! | TCATTCTCTACTATTATACA+AGG | - | chr7_1:40437855-40437874 | Msa1019210:CDS | 25.0% |
| ! | TACTATTATACAAGGACTTT+AGG | - | chr7_1:40437863-40437882 | Msa1019210:CDS | 25.0% |
| ! | TGAAATATTAAATGGTAGCA+TGG | + | chr7_1:40438008-40438027 | None:intergenic | 25.0% |
| !! | AAACCGATTTATTTATGACA+AGG | - | chr7_1:40438139-40438158 | Msa1019210:CDS | 25.0% |
| ! | AAACTAAGATGAACTAATAG+CGG | + | chr7_1:40438328-40438347 | None:intergenic | 25.0% |
| ! | TGTGCTCAATTTAAACTTAA+TGG | - | chr7_1:40438348-40438367 | Msa1019210:CDS | 25.0% |
| ! | TTTAAACTTAATGGAATGTC+TGG | - | chr7_1:40438357-40438376 | Msa1019210:CDS | 25.0% |
| !! | TGGAGCATATGATTTTTAAG+GGG | - | chr7_1:40433242-40433261 | Msa1019210:CDS | 30.0% |
| AGAAAGGGATGTTATTCTTA+GGG | - | chr7_1:40433453-40433472 | Msa1019210:intron | 30.0% | |
| !! | TTTAACATGTTTGTTGTGAG+TGG | - | chr7_1:40433561-40433580 | Msa1019210:CDS | 30.0% |
| ! | AATTTTGTGAGACTGTTGTT+TGG | - | chr7_1:40433609-40433628 | Msa1019210:intron | 30.0% |
| !! | ATTTTGTGAGACTGTTGTTT+GGG | - | chr7_1:40433610-40433629 | Msa1019210:intron | 30.0% |
| !!! | TATCAGCTGTTTTTAGCTTA+TGG | - | chr7_1:40433651-40433670 | Msa1019210:intron | 30.0% |
| !!! | ATCAGCTGTTTTTAGCTTAT+GGG | - | chr7_1:40433652-40433671 | Msa1019210:intron | 30.0% |
| ACTTCTTTCGTATAAGCTAT+GGG | + | chr7_1:40433683-40433702 | None:intergenic | 30.0% | |
| AACTTCTTTCGTATAAGCTA+TGG | + | chr7_1:40433684-40433703 | None:intergenic | 30.0% | |
| !!! | CGATTTTTTTGTGGGATTTT+GGG | - | chr7_1:40433785-40433804 | Msa1019210:intron | 30.0% |
| !!! | TGGCTTATTTTGTTAGCTTA+TGG | + | chr7_1:40433932-40433951 | None:intergenic | 30.0% |
| ATGTGTAGAAGTTGTAGTAA+TGG | - | chr7_1:40434293-40434312 | Msa1019210:intron | 30.0% | |
| TTACAACAACAAATATCGGT+GGG | + | chr7_1:40434361-40434380 | None:intergenic | 30.0% | |
| ATTACAACAACAAATATCGG+TGG | + | chr7_1:40434362-40434381 | None:intergenic | 30.0% | |
| !! | TCAACTTTTAGAGACAATGT+CGG | - | chr7_1:40434397-40434416 | Msa1019210:intron | 30.0% |
| AGAATCTCTTGTTGAATAGA+TGG | - | chr7_1:40434423-40434442 | Msa1019210:intron | 30.0% | |
| TCTACTCTACCTTTATCTAT+TGG | + | chr7_1:40434518-40434537 | None:intergenic | 30.0% | |
| !! | CCTTTTTAAAGGTTTTTCTC+TGG | + | chr7_1:40434541-40434560 | None:intergenic | 30.0% |
| ! | CCAGAGAAAAACCTTTAAAA+AGG | - | chr7_1:40434538-40434557 | Msa1019210:intron | 30.0% |
| !!! | ATATTGCTTTTTGTAGGTTG+AGG | - | chr7_1:40434667-40434686 | Msa1019210:intron | 30.0% |
| !!! | TATTGCTTTTTGTAGGTTGA+GGG | - | chr7_1:40434668-40434687 | Msa1019210:intron | 30.0% |
| ! | GGGAATTTTACTTTGTTGAT+TGG | + | chr7_1:40435427-40435446 | None:intergenic | 30.0% |
| TAAGCAAAGCATGTATCATT+GGG | + | chr7_1:40435449-40435468 | None:intergenic | 30.0% | |
| !!! | GACCTAATTTGGTTTTCTTA+TGG | - | chr7_1:40435605-40435624 | Msa1019210:intron | 30.0% |
| TCTAAAAGTTGGATCATTGA+AGG | + | chr7_1:40435943-40435962 | None:intergenic | 30.0% | |
| ! | ACACATACACTTCTAAAAGT+TGG | + | chr7_1:40435954-40435973 | None:intergenic | 30.0% |
| ! | TTCTTTTCTCCTTTTATCCA+AGG | - | chr7_1:40436115-40436134 | Msa1019210:intron | 30.0% |
| CTTATGTCTTTCTATGCAAT+AGG | - | chr7_1:40436252-40436271 | Msa1019210:CDS | 30.0% | |
| TCTTTCTATTCAATATGTGG+TGG | - | chr7_1:40436323-40436342 | Msa1019210:intron | 30.0% | |
| TCATATTCAATTAGCAAGAC+AGG | + | chr7_1:40436619-40436638 | None:intergenic | 30.0% | |
| TTAACTCTGTAGTTGTATCT+TGG | + | chr7_1:40436696-40436715 | None:intergenic | 30.0% | |
| GAATATATGCAACTAAGTCT+TGG | - | chr7_1:40437119-40437138 | Msa1019210:intron | 30.0% | |
| GATAATAAAATTAACCAGCC+AGG | + | chr7_1:40437164-40437183 | None:intergenic | 30.0% | |
| ! | TGTTTTCATGCTCTTGATTT+TGG | - | chr7_1:40437365-40437384 | Msa1019210:intron | 30.0% |
| TTGAACGTGCTAATTCAATA+TGG | + | chr7_1:40437449-40437468 | None:intergenic | 30.0% | |
| ! | TTCTGCACATAATCTTTTGA+AGG | + | chr7_1:40437523-40437542 | None:intergenic | 30.0% |
| AGATTATGTGCAGAATATGA+AGG | - | chr7_1:40437528-40437547 | Msa1019210:intron | 30.0% | |
| AAAAACAGCATAGATGTTTG+AGG | + | chr7_1:40437597-40437616 | None:intergenic | 30.0% | |
| TAGCAAACAATTCAGCAAAT+GGG | + | chr7_1:40438079-40438098 | None:intergenic | 30.0% | |
| CCATTAGCACTTAAAAAGAT+TGG | + | chr7_1:40438206-40438225 | None:intergenic | 30.0% | |
| !!! | CCAATCTTTTTAAGTGCTAA+TGG | - | chr7_1:40438203-40438222 | Msa1019210:CDS | 30.0% |
| !!! | GAGTTTTTGTTTGACGGATT+CGG | + | chr7_1:40432990-40433009 | None:intergenic | 35.0% |
| !!! | TAATGGAACTGCGCATTTTT+TGG | - | chr7_1:40433222-40433241 | Msa1019210:CDS | 35.0% |
| !! | GCATATGATTTTTAAGGGGA+CGG | - | chr7_1:40433246-40433265 | Msa1019210:CDS | 35.0% |
| GAAGAGGAGATTGAGAATAT+GGG | - | chr7_1:40433292-40433311 | Msa1019210:intron | 35.0% | |
| ACAGACTACTTATTATGCGA+AGG | - | chr7_1:40433345-40433364 | Msa1019210:intron | 35.0% | |
| GAGAAAGGGATGTTATTCTT+AGG | - | chr7_1:40433452-40433471 | Msa1019210:intron | 35.0% | |
| GGATGTTATTCTTAGGGAAA+TGG | - | chr7_1:40433459-40433478 | Msa1019210:intron | 35.0% | |
| TATTCTTAGGGAAATGGAAG+AGG | - | chr7_1:40433465-40433484 | Msa1019210:intron | 35.0% | |
| !!! | GCGATTTTTTTGTGGGATTT+TGG | - | chr7_1:40433784-40433803 | Msa1019210:intron | 35.0% |
| !!! | TGTTTGGATTGGCCTATTTT+GGG | - | chr7_1:40433809-40433828 | Msa1019210:intron | 35.0% |
| ! | AATCCTGTTTTGTGTGTTCA+AGG | - | chr7_1:40433990-40434009 | Msa1019210:intron | 35.0% |
| !! | GTACAGATTTTAAGAACTGC+CGG | - | chr7_1:40434189-40434208 | Msa1019210:intron | 35.0% |
| !! | TACAGATTTTAAGAACTGCC+GGG | - | chr7_1:40434190-40434209 | Msa1019210:intron | 35.0% |
| AAGTTGTAGTAATGGCAGTT+AGG | - | chr7_1:40434301-40434320 | Msa1019210:intron | 35.0% | |
| AGTTGTAGTAATGGCAGTTA+GGG | - | chr7_1:40434302-40434321 | Msa1019210:intron | 35.0% | |
| !! | CAACTTTTAGAGACAATGTC+GGG | - | chr7_1:40434398-40434417 | Msa1019210:intron | 35.0% |
| !! | AACTTTTAGAGACAATGTCG+GGG | - | chr7_1:40434399-40434418 | Msa1019210:intron | 35.0% |
| GTTGAATAGATGGTAGAATG+TGG | - | chr7_1:40434433-40434452 | Msa1019210:intron | 35.0% | |
| ! | GTTCTCATTCTTTTGCTGAA+AGG | - | chr7_1:40434632-40434651 | Msa1019210:intron | 35.0% |
| ! | ATTGTCTTAATGTTCTGAGC+AGG | + | chr7_1:40434773-40434792 | None:intergenic | 35.0% |
| GTTTATCTACATACCATCCT+AGG | + | chr7_1:40434842-40434861 | None:intergenic | 35.0% | |
| CTATGGACACTATACATGAT+CGG | + | chr7_1:40434885-40434904 | None:intergenic | 35.0% | |
| AAAAACGAGCTTCAGAACTA+TGG | + | chr7_1:40434902-40434921 | None:intergenic | 35.0% | |
| ! | AAGGAACCTGCAATTTTTAC+TGG | - | chr7_1:40435123-40435142 | Msa1019210:intron | 35.0% |
| TCAGAACCAGTAAAAATTGC+AGG | + | chr7_1:40435132-40435151 | None:intergenic | 35.0% | |
| !!! | TGCAATTTTTACTGGTTCTG+AGG | - | chr7_1:40435131-40435150 | Msa1019210:intron | 35.0% |
| ! | ACTCGTTTTGTAAACAGGTT+CGG | - | chr7_1:40435229-40435248 | Msa1019210:intron | 35.0% |
| TATTCCTCTTGCACAATTTG+CGG | - | chr7_1:40435266-40435285 | Msa1019210:intron | 35.0% | |
| TCCTGATTCAATTGCTTTGA+TGG | - | chr7_1:40435317-40435336 | Msa1019210:intron | 35.0% | |
| ACCATCAAAGCAATTGAATC+AGG | + | chr7_1:40435321-40435340 | None:intergenic | 35.0% | |
| AAGCAAAGCATGTATCATTG+GGG | + | chr7_1:40435448-40435467 | None:intergenic | 35.0% | |
| GTAAGCAAAGCATGTATCAT+TGG | + | chr7_1:40435450-40435469 | None:intergenic | 35.0% | |
| ACATTACATGTCTTCCTCTT+GGG | + | chr7_1:40435689-40435708 | None:intergenic | 35.0% | |
| AGTAGAAGTCCTTGGATAAA+AGG | + | chr7_1:40436127-40436146 | None:intergenic | 35.0% | |
| GTGTCTTTCTTCACAATATG+CGG | - | chr7_1:40436189-40436208 | Msa1019210:CDS | 35.0% | |
| ATGTCTTTCTATGCAATAGG+TGG | - | chr7_1:40436255-40436274 | Msa1019210:CDS | 35.0% | |
| AATGTATGAGACAACCAAGT+TGG | - | chr7_1:40436522-40436541 | Msa1019210:CDS | 35.0% | |
| GTTTAGCATATTGCATCATC+TGG | - | chr7_1:40436736-40436755 | Msa1019210:intron | 35.0% | |
| CATGGGTGAAATTTGAATCA+CGG | + | chr7_1:40436876-40436895 | None:intergenic | 35.0% | |
| ATGTCATATGCGTTCATCAT+GGG | + | chr7_1:40436893-40436912 | None:intergenic | 35.0% | |
| AATGTCATATGCGTTCATCA+TGG | + | chr7_1:40436894-40436913 | None:intergenic | 35.0% | |
| !! | CAACTGACATTTGTTGTCAT+TGG | - | chr7_1:40436976-40436995 | Msa1019210:intron | 35.0% |
| CAATAAGCTATGAATCAGGA+AGG | + | chr7_1:40437231-40437250 | None:intergenic | 35.0% | |
| ACAGCAATAAGCTATGAATC+AGG | + | chr7_1:40437235-40437254 | None:intergenic | 35.0% | |
| ! | ATGAATCCAGAGGTGTAAAA+TGG | - | chr7_1:40437259-40437278 | Msa1019210:intron | 35.0% |
| ! | TGAATCCAGAGGTGTAAAAT+GGG | - | chr7_1:40437260-40437279 | Msa1019210:intron | 35.0% |
| ATGGCATGGGTAGATAAATT+TGG | + | chr7_1:40437430-40437449 | None:intergenic | 35.0% | |
| GTGCTAATTCAATATGGCAT+GGG | + | chr7_1:40437443-40437462 | None:intergenic | 35.0% | |
| GAACAATCCAATGAACTACT+AGG | + | chr7_1:40437558-40437577 | None:intergenic | 35.0% | |
| ! | TAGATGTTTGAGGAGTATGA+AGG | + | chr7_1:40437587-40437606 | None:intergenic | 35.0% |
| TTGTTTCAGCTACTCACATA+TGG | - | chr7_1:40438044-40438063 | Msa1019210:CDS | 35.0% | |
| CTAGCAAACAATTCAGCAAA+TGG | + | chr7_1:40438080-40438099 | None:intergenic | 35.0% | |
| TGCAACACGTTTAATTGTAC+TGG | + | chr7_1:40438120-40438139 | None:intergenic | 35.0% | |
| TAATCAGGTAAACGCTGAAT+AGG | + | chr7_1:40438275-40438294 | None:intergenic | 35.0% | |
| TGAAAAATGATGGCCTAAAC+AGG | + | chr7_1:40438425-40438444 | None:intergenic | 35.0% | |
| ! | GGAGAAACCAAGCAATTTTA+GGG | + | chr7_1:40438567-40438586 | None:intergenic | 35.0% |
| !! | GCTCATTGATTTAGTGCATT+TGG | - | chr7_1:40438626-40438645 | Msa1019210:five_prime_UTR | 35.0% |
| !! | GCGTTGGAGTTTTTGTTTGA+CGG | + | chr7_1:40432996-40433015 | None:intergenic | 40.0% |
| ! | GATCTGGATTTTCTAAGCGT+TGG | + | chr7_1:40433012-40433031 | None:intergenic | 40.0% |
| AATTTGAGGAAACGTGGATC+TGG | + | chr7_1:40433028-40433047 | None:intergenic | 40.0% | |
| GATCCACGTTTCCTCAAATT+CGG | - | chr7_1:40433028-40433047 | Msa1019210:CDS | 40.0% | |
| GTTTAGGTGAACCGAATTTG+AGG | + | chr7_1:40433042-40433061 | None:intergenic | 40.0% | |
| GGAAGAGGAGATTGAGAATA+TGG | - | chr7_1:40433291-40433310 | Msa1019210:intron | 40.0% | |
| AGGAGATTGAGAATATGGGT+GGG | - | chr7_1:40433296-40433315 | Msa1019210:intron | 40.0% | |
| TATTATGCGAAGGTTTCGCA+AGG | - | chr7_1:40433355-40433374 | Msa1019210:intron | 40.0% | |
| ATTATGCGAAGGTTTCGCAA+GGG | - | chr7_1:40433356-40433375 | Msa1019210:intron | 40.0% | |
| !! | AGAATCGGATTAGTCGAGAA+AGG | - | chr7_1:40433437-40433456 | Msa1019210:intron | 40.0% |
| !! | GAATCGGATTAGTCGAGAAA+GGG | - | chr7_1:40433438-40433457 | Msa1019210:intron | 40.0% |
| !! | CATGTTTGTTGTGAGTGGTT+TGG | - | chr7_1:40433566-40433585 | Msa1019210:CDS | 40.0% |
| !!! | CTGTTTGGATTGGCCTATTT+TGG | - | chr7_1:40433808-40433827 | Msa1019210:intron | 40.0% |
| !! | AGCAAAGGGTTAGTTTGGAT+TGG | + | chr7_1:40433952-40433971 | None:intergenic | 40.0% |
| !! | TTCTCAGCAAAGGGTTAGTT+TGG | + | chr7_1:40433957-40433976 | None:intergenic | 40.0% |
| TGTCAGCTATTCTCAGCAAA+GGG | + | chr7_1:40433966-40433985 | None:intergenic | 40.0% | |
| !! | TTCTCACTCCAAAAGCACTA+TGG | - | chr7_1:40434021-40434040 | Msa1019210:intron | 40.0% |
| ! | GTGTACTTCCATAGTGCTTT+TGG | + | chr7_1:40434032-40434051 | None:intergenic | 40.0% |
| GTTGTAGTAATGGCAGTTAG+GGG | - | chr7_1:40434303-40434322 | Msa1019210:intron | 40.0% | |
| AGATGGTAGAATGTGGAAAC+AGG | - | chr7_1:40434440-40434459 | Msa1019210:intron | 40.0% | |
| CAAAGATCACTTCCTCTGTT+TGG | + | chr7_1:40434694-40434713 | None:intergenic | 40.0% | |
| AATCACCAAAGCTCATCTAC+AGG | - | chr7_1:40434790-40434809 | Msa1019210:CDS | 40.0% | |
| GTAATCCTGTAGATGAGCTT+TGG | + | chr7_1:40434798-40434817 | None:intergenic | 40.0% | |
| ! | CTGATGTCTGTTTTCTGTGT+GGG | - | chr7_1:40434979-40434998 | Msa1019210:intron | 40.0% |
| AGCAACTCAGTTGGTTGAAA+AGG | - | chr7_1:40435104-40435123 | Msa1019210:intron | 40.0% | |
| CTGTTTACAAAACGAGTGGA+TGG | + | chr7_1:40435226-40435245 | None:intergenic | 40.0% | |
| ! | CATCCACTCGTTTTGTAAAC+AGG | - | chr7_1:40435224-40435243 | Msa1019210:intron | 40.0% |
| GAACCTGTTTACAAAACGAG+TGG | + | chr7_1:40435230-40435249 | None:intergenic | 40.0% | |
| ! | CAATTTGCGGTAGCTTTTGA+AGG | - | chr7_1:40435279-40435298 | Msa1019210:intron | 40.0% |
| !!! | TAGCTTTTGAAGGAGCATCT+TGG | - | chr7_1:40435289-40435308 | Msa1019210:intron | 40.0% |
| ! | TTTACTTTGTTGATTGGGGG+AGG | + | chr7_1:40435421-40435440 | None:intergenic | 40.0% |
| AGCAAAGCATGTATCATTGG+GGG | + | chr7_1:40435447-40435466 | None:intergenic | 40.0% | |
| ! | TGAAGTTGCAGAAAGCATGA+TGG | - | chr7_1:40435522-40435541 | Msa1019210:intron | 40.0% |
| GGCTTTCAACACCAATTACA+AGG | - | chr7_1:40435543-40435562 | Msa1019210:intron | 40.0% | |
| CAACACCAATTACAAGGACA+CGG | - | chr7_1:40435549-40435568 | Msa1019210:intron | 40.0% | |
| AACACCAATTACAAGGACAC+GGG | - | chr7_1:40435550-40435569 | Msa1019210:intron | 40.0% | |
| CGCTAAGGTAAGACCTAATT+TGG | - | chr7_1:40435594-40435613 | Msa1019210:intron | 40.0% | |
| GACATTACATGTCTTCCTCT+TGG | + | chr7_1:40435690-40435709 | None:intergenic | 40.0% | |
| TCTTTCTTCACAATATGCGG+TGG | - | chr7_1:40436192-40436211 | Msa1019210:CDS | 40.0% | |
| TCTTTCTATGCAATAGGTGG+TGG | - | chr7_1:40436258-40436277 | Msa1019210:CDS | 40.0% | |
| !! | TAATTTGTTGTGCTCTCAGC+CGG | - | chr7_1:40436471-40436490 | Msa1019210:intron | 40.0% |
| TGAAACCTGATAAGCCAACT+TGG | + | chr7_1:40436539-40436558 | None:intergenic | 40.0% | |
| GTTCGTCAAAATACAGTTGC+AGG | + | chr7_1:40436774-40436793 | None:intergenic | 40.0% | |
| TGCTGTGTTAATGAATCCAG+AGG | - | chr7_1:40437249-40437268 | Msa1019210:intron | 40.0% | |
| ! | ACATTCCCATTTTACACCTC+TGG | + | chr7_1:40437268-40437287 | None:intergenic | 40.0% |
| CGTGCTAATTCAATATGGCA+TGG | + | chr7_1:40437444-40437463 | None:intergenic | 40.0% | |
| AGGTATGCCTAGTAGTTCAT+TGG | - | chr7_1:40437548-40437567 | Msa1019210:intron | 40.0% | |
| GACCAATATCTTCAGCTACA+GGG | + | chr7_1:40437776-40437795 | None:intergenic | 40.0% | |
| TACGTGAGATGTAAGGTCTA+TGG | + | chr7_1:40437807-40437826 | None:intergenic | 40.0% | |
| AATGCACTACGTGAGATGTA+AGG | + | chr7_1:40437814-40437833 | None:intergenic | 40.0% | |
| TCATTTCATGTCTGTCTTGC+AGG | - | chr7_1:40438226-40438245 | Msa1019210:CDS | 40.0% | |
| AGCGTTTACCTGATTACAAC+TGG | - | chr7_1:40438279-40438298 | Msa1019210:CDS | 40.0% | |
| ATGTACTCCATATATGCCTC+TGG | - | chr7_1:40438395-40438414 | Msa1019210:CDS | 40.0% | |
| GCTGTTGTCAGTGATGTAAA+TGG | - | chr7_1:40438494-40438513 | Msa1019210:CDS | 40.0% | |
| TGCATTGCCCTAAAATTGCT+TGG | - | chr7_1:40438557-40438576 | Msa1019210:five_prime_UTR | 40.0% | |
| ! | GGGAGAAACCAAGCAATTTT+AGG | + | chr7_1:40438568-40438587 | None:intergenic | 40.0% |
| !!! | TGTGGCTAGGGTTTGGTTTT+GGG | + | chr7_1:40432772-40432791 | None:intergenic | 45.0% |
| !! | GAGTTTGTTGATCGTCATGG+TGG | + | chr7_1:40432810-40432829 | None:intergenic | 45.0% |
| !! | GAGGAGTTTGTTGATCGTCA+TGG | + | chr7_1:40432813-40432832 | None:intergenic | 45.0% |
| CGATCGTAGATCATGACGTT+GGG | + | chr7_1:40432962-40432981 | None:intergenic | 45.0% | |
| GAACCGAATTTGAGGAAACG+TGG | + | chr7_1:40433034-40433053 | None:intergenic | 45.0% | |
| AGAGTTGTGATGCGAGTTTC+AGG | + | chr7_1:40433100-40433119 | None:intergenic | 45.0% | |
| !! | TGATTTTTAAGGGGACGGAG+AGG | - | chr7_1:40433251-40433270 | Msa1019210:CDS | 45.0% |
| GAGGAGATTGAGAATATGGG+TGG | - | chr7_1:40433295-40433314 | Msa1019210:intron | 45.0% | |
| TTATGCGAAGGTTTCGCAAG+GGG | - | chr7_1:40433357-40433376 | Msa1019210:intron | 45.0% | |
| ! | GCCTGTTGCGTTGGATATTT+TGG | - | chr7_1:40433384-40433403 | Msa1019210:intron | 45.0% |
| GCCAAAATATCCAACGCAAC+AGG | + | chr7_1:40433388-40433407 | None:intergenic | 45.0% | |
| ! | TTGTGGGATTTTGGGCTGTT+TGG | - | chr7_1:40433793-40433812 | Msa1019210:intron | 45.0% |
| ! | GGATTTTGGGCTGTTTGGAT+TGG | - | chr7_1:40433798-40433817 | Msa1019210:intron | 45.0% |
| CTGTCAGCTATTCTCAGCAA+AGG | + | chr7_1:40433967-40433986 | None:intergenic | 45.0% | |
| CTTTGCTGAGAATAGCTGAC+AGG | - | chr7_1:40433965-40433984 | Msa1019210:intron | 45.0% | |
| CCTCCTTGAACACACAAAAC+AGG | + | chr7_1:40433996-40434015 | None:intergenic | 45.0% | |
| ! | CCTGTTTTGTGTGTTCAAGG+AGG | - | chr7_1:40433993-40434012 | Msa1019210:intron | 45.0% |
| AGTTGTTAATGGGGGTGGAA+GGG | + | chr7_1:40434336-40434355 | None:intergenic | 45.0% | |
| TCGGTGGGTCAGTTGTTAAT+GGG | + | chr7_1:40434346-40434365 | None:intergenic | 45.0% | |
| ATCGGTGGGTCAGTTGTTAA+TGG | + | chr7_1:40434347-40434366 | None:intergenic | 45.0% | |
| ! | TCCCAAAATGGTTCTGCCAA+GGG | + | chr7_1:40434750-40434769 | None:intergenic | 45.0% |
| AGACACATTACACTGCTCCT+AGG | - | chr7_1:40434822-40434841 | Msa1019210:CDS | 45.0% | |
| ACATTACACTGCTCCTAGGA+TGG | - | chr7_1:40434826-40434845 | Msa1019210:CDS | 45.0% | |
| CCACACAGAAAACAGACATC+AGG | + | chr7_1:40434981-40435000 | None:intergenic | 45.0% | |
| ! | CCTGATGTCTGTTTTCTGTG+TGG | - | chr7_1:40434978-40434997 | Msa1019210:intron | 45.0% |
| TTCAAGGTGATAGCTGCATC+TGG | - | chr7_1:40435009-40435028 | Msa1019210:intron | 45.0% | |
| !! | GGTGGGATTTGTTGACAACT+TGG | + | chr7_1:40435082-40435101 | None:intergenic | 45.0% |
| TTCAACCAACTGAGTTGCTG+TGG | + | chr7_1:40435103-40435122 | None:intergenic | 45.0% | |
| ATGGTCATGCAAGCAATGCT+GGG | - | chr7_1:40435336-40435355 | Msa1019210:intron | 45.0% | |
| GGTTCTTGGAATAAGACAGC+AGG | - | chr7_1:40435357-40435376 | Msa1019210:intron | 45.0% | |
| TCTTGGAATAAGACAGCAGG+AGG | - | chr7_1:40435360-40435379 | Msa1019210:intron | 45.0% | |
| AGCAGGAGGTGGAAAACATA+TGG | - | chr7_1:40435374-40435393 | Msa1019210:intron | 45.0% | |
| GCAGGAGGTGGAAAACATAT+GGG | - | chr7_1:40435375-40435394 | Msa1019210:intron | 45.0% | |
| CAGGAGGTGGAAAACATATG+GGG | - | chr7_1:40435376-40435395 | Msa1019210:intron | 45.0% | |
| AAGACCCGTGTCCTTGTAAT+TGG | + | chr7_1:40435557-40435576 | None:intergenic | 45.0% | |
| ! | TACAAGGACACGGGTCTTTT+TGG | - | chr7_1:40435559-40435578 | Msa1019210:intron | 45.0% |
| TGGTGTTTATGCTGTCGCTA+AGG | - | chr7_1:40435579-40435598 | Msa1019210:intron | 45.0% | |
| ! | GACAACCAAGTTGGCTTATC+AGG | - | chr7_1:40436531-40436550 | Msa1019210:CDS | 45.0% |
| ! | GTTGGCTTATCAGGTTTCAG+AGG | - | chr7_1:40436540-40436559 | Msa1019210:CDS | 45.0% |
| TAGTGATCACGTTTGTGACC+TGG | - | chr7_1:40437143-40437162 | Msa1019210:intron | 45.0% | |
| TCGCTTCTGCTTCACATTGA+TGG | - | chr7_1:40437744-40437763 | Msa1019210:intron | 45.0% | |
| AGCCCTGTAGCTGAAGATAT+TGG | - | chr7_1:40437771-40437790 | Msa1019210:intron | 45.0% | |
| CGACCAATATCTTCAGCTAC+AGG | + | chr7_1:40437777-40437796 | None:intergenic | 45.0% | |
| AGCTGAAGATATTGGTCGTC+AGG | - | chr7_1:40437779-40437798 | Msa1019210:intron | 45.0% | |
| ! | GATGTTGCTATTGCTGCCAT+GGG | - | chr7_1:40438248-40438267 | Msa1019210:CDS | 45.0% |
| TAAACGCTGAATAGGTCCCA+TGG | + | chr7_1:40438267-40438286 | None:intergenic | 45.0% | |
| CGTCTGAACCAGTTGTAATC+AGG | + | chr7_1:40438290-40438309 | None:intergenic | 45.0% | |
| GAACTAATAGCGGTTCCAGT+AGG | + | chr7_1:40438318-40438337 | None:intergenic | 45.0% | |
| ! | AGGTCATCCAGAGGCATATA+TGG | + | chr7_1:40438405-40438424 | None:intergenic | 45.0% |
| TCAAAAGAGACCAGAAGCCA+GGG | + | chr7_1:40438599-40438618 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTAATATATAAATA+TGG | - | chr7_1:40434948-40434967 | Msa1019210:intron | 5.0% |
| !!! | GTGGCTAGGGTTTGGTTTTG+GGG | + | chr7_1:40432771-40432790 | None:intergenic | 50.0% |
| !! | GTGTGGCTAGGGTTTGGTTT+TGG | + | chr7_1:40432773-40432792 | None:intergenic | 50.0% |
| AACCAAACCCTAGCCACACA+CGG | - | chr7_1:40432774-40432793 | Msa1019210:three_prime_UTR | 50.0% | |
| ! | GTTGATCGTCATGGTGGAGA+GGG | + | chr7_1:40432804-40432823 | None:intergenic | 50.0% |
| ! | TGTTGATCGTCATGGTGGAG+AGG | + | chr7_1:40432805-40432824 | None:intergenic | 50.0% |
| ATGAACGGCGTACTAAGGTG+AGG | + | chr7_1:40432832-40432851 | None:intergenic | 50.0% | |
| GATCGGATTGAGGTGAGGAT+GGG | + | chr7_1:40432866-40432885 | None:intergenic | 50.0% | |
| TAGATCATGACGTTGGGAGG+TGG | + | chr7_1:40432956-40432975 | None:intergenic | 50.0% | |
| TCGTAGATCATGACGTTGGG+AGG | + | chr7_1:40432959-40432978 | None:intergenic | 50.0% | |
| GCGATCGTAGATCATGACGT+TGG | + | chr7_1:40432963-40432982 | None:intergenic | 50.0% | |
| !! | TGGTCACGGATTTCGGGTTT+AGG | + | chr7_1:40433058-40433077 | None:intergenic | 50.0% |
| TCGTGTGTGGTCACGGATTT+CGG | + | chr7_1:40433065-40433084 | None:intergenic | 50.0% | |
| AGAGGATTCGTGTGTGGTCA+CGG | + | chr7_1:40433072-40433091 | None:intergenic | 50.0% | |
| TGTGATGCGAGTTTCAGGAG+CGG | + | chr7_1:40433095-40433114 | None:intergenic | 50.0% | |
| CGCATCACAACTCTCCCTAA+CGG | - | chr7_1:40433106-40433125 | Msa1019210:intron | 50.0% | |
| TTCGAGACGGAGGAGAGTAA+TGG | - | chr7_1:40433205-40433224 | Msa1019210:CDS | 50.0% | |
| !! | TTTTTAAGGGGACGGAGAGG+AGG | - | chr7_1:40433254-40433273 | Msa1019210:CDS | 50.0% |
| GAATGCGAGGGATTTGGAAG+AGG | - | chr7_1:40433276-40433295 | Msa1019210:intron | 50.0% | |
| TGAGAGCAACTCTACTGACC+CGG | + | chr7_1:40434211-40434230 | None:intergenic | 50.0% | |
| GTCAGTAGAGTTGCTCTCAC+AGG | - | chr7_1:40434212-40434231 | Msa1019210:intron | 50.0% | |
| GTAGAGTTGCTCTCACAGGT+CGG | - | chr7_1:40434216-40434235 | Msa1019210:intron | 50.0% | |
| CAGTTGTTAATGGGGGTGGA+AGG | + | chr7_1:40434337-40434356 | None:intergenic | 50.0% | |
| GGTGGGTCAGTTGTTAATGG+GGG | + | chr7_1:40434344-40434363 | None:intergenic | 50.0% | |
| CGGTGGGTCAGTTGTTAATG+GGG | + | chr7_1:40434345-40434364 | None:intergenic | 50.0% | |
| ! | AAGGGGAGTGTACTGGAAAG+CGG | + | chr7_1:40434732-40434751 | None:intergenic | 50.0% |
| ! | TCCCCTTGGCAGAACCATTT+TGG | - | chr7_1:40434745-40434764 | Msa1019210:intron | 50.0% |
| ! | CCCAAAATGGTTCTGCCAAG+GGG | + | chr7_1:40434749-40434768 | None:intergenic | 50.0% |
| ! | CCCCTTGGCAGAACCATTTT+GGG | - | chr7_1:40434746-40434765 | Msa1019210:intron | 50.0% |
| ! | GTCCCAAAATGGTTCTGCCA+AGG | + | chr7_1:40434751-40434770 | None:intergenic | 50.0% |
| ! | GTTCTGAGCAGGTCCCAAAA+TGG | + | chr7_1:40434762-40434781 | None:intergenic | 50.0% |
| !! | CTGTGTGGGTCTGCTTTTCA+AGG | - | chr7_1:40434993-40435012 | Msa1019210:intron | 50.0% |
| ACCAACTGAGTTGCTGTGGT+GGG | + | chr7_1:40435099-40435118 | None:intergenic | 50.0% | |
| AACCAACTGAGTTGCTGTGG+TGG | + | chr7_1:40435100-40435119 | None:intergenic | 50.0% | |
| GCTACCGCAAATTGTGCAAG+AGG | + | chr7_1:40435273-40435292 | None:intergenic | 50.0% | |
| GATGGTCATGCAAGCAATGC+TGG | - | chr7_1:40435335-40435354 | Msa1019210:intron | 50.0% | |
| TGCAAGCAATGCTGGGTTCT+TGG | - | chr7_1:40435343-40435362 | Msa1019210:intron | 50.0% | |
| TGGAATAAGACAGCAGGAGG+TGG | - | chr7_1:40435363-40435382 | Msa1019210:intron | 50.0% | |
| GACAGATCATCCAAGCAGTC+CGG | + | chr7_1:40436493-40436512 | None:intergenic | 50.0% | |
| ! | GGATGTTGCTATTGCTGCCA+TGG | - | chr7_1:40438247-40438266 | Msa1019210:CDS | 50.0% |
| TGCCTCTGGATGACCTGTTT+AGG | - | chr7_1:40438409-40438428 | Msa1019210:CDS | 50.0% | |
| CTCAAAAGAGACCAGAAGCC+AGG | + | chr7_1:40438600-40438619 | None:intergenic | 50.0% | |
| ! | CTGGCTTCTGGTCTCTTTTG+AGG | - | chr7_1:40438598-40438617 | Msa1019210:five_prime_UTR | 50.0% |
| ACCAAACCCTAGCCACACAC+GGG | - | chr7_1:40432775-40432794 | Msa1019210:three_prime_UTR | 55.0% | |
| CCTTAGTACGCCGTTCATCC+CGG | - | chr7_1:40432834-40432853 | Msa1019210:three_prime_UTR | 55.0% | |
| GGATCGGATTGAGGTGAGGA+TGG | + | chr7_1:40432867-40432886 | None:intergenic | 55.0% | |
| TCATGACGTTGGGAGGTGGT+GGG | + | chr7_1:40432952-40432971 | None:intergenic | 55.0% | |
| ATCATGACGTTGGGAGGTGG+TGG | + | chr7_1:40432953-40432972 | None:intergenic | 55.0% | |
| CGTGTGTGGTCACGGATTTC+GGG | + | chr7_1:40433064-40433083 | None:intergenic | 55.0% | |
| TGAGCTAAGGCTAGACTCCG+TGG | + | chr7_1:40433143-40433162 | None:intergenic | 55.0% | |
| !! | CGGAGTCTAGCCTTAGCTCA+AGG | - | chr7_1:40433143-40433162 | Msa1019210:intron | 55.0% |
| CGGTTGCAGTCCTTGAGCTA+AGG | + | chr7_1:40433156-40433175 | None:intergenic | 55.0% | |
| AGCTCAAGGACTGCAACCGT+TGG | - | chr7_1:40433157-40433176 | Msa1019210:intron | 55.0% | |
| GCTCAAGGACTGCAACCGTT+GGG | - | chr7_1:40433158-40433177 | Msa1019210:intron | 55.0% | |
| CTCAAGGACTGCAACCGTTG+GGG | - | chr7_1:40433159-40433178 | Msa1019210:intron | 55.0% | |
| !! | GGCATCGATCCAAACCCCAA+CGG | + | chr7_1:40433176-40433195 | None:intergenic | 55.0% |
| GTTGGGGTTTGGATCGATGC+CGG | - | chr7_1:40433175-40433194 | Msa1019210:intron | 55.0% | |
| TTGGGGTTTGGATCGATGCC+GGG | - | chr7_1:40433176-40433195 | Msa1019210:intron | 55.0% | |
| GAGGAGGAATGCGAGGGATT+TGG | - | chr7_1:40433270-40433289 | Msa1019210:intron | 55.0% | |
| GGGTCAGTTGTTAATGGGGG+TGG | + | chr7_1:40434341-40434360 | None:intergenic | 55.0% | |
| ! | GTAGGTTGAGGGCCAAACAG+AGG | - | chr7_1:40434679-40434698 | Msa1019210:intron | 55.0% |
| ACTGGAAAGCGGTTGCGTGT+AGG | + | chr7_1:40434721-40434740 | None:intergenic | 55.0% | |
| GCTTTCCAGTACACTCCCCT+TGG | - | chr7_1:40434731-40434750 | Msa1019210:intron | 55.0% | |
| ! | TTCTGCCAAGGGGAGTGTAC+TGG | + | chr7_1:40434739-40434758 | None:intergenic | 55.0% |
| TCCCACCACAGCAACTCAGT+TGG | - | chr7_1:40435095-40435114 | Msa1019210:intron | 55.0% | |
| TCTGAGCTAGCACAGCGAGT+TGG | - | chr7_1:40435493-40435512 | Msa1019210:intron | 55.0% | |
| AGCTCGCATGCAAACCCAAG+AGG | - | chr7_1:40435672-40435691 | Msa1019210:intron | 55.0% | |
| TGTTACGCGTGCTCGCAATC+AGG | - | chr7_1:40436567-40436586 | Msa1019210:CDS | 55.0% | |
| GATCACGTTTGTGACCTGGC+TGG | - | chr7_1:40437147-40437166 | Msa1019210:intron | 55.0% | |
| GGTTCAGACGCAGAACCTAC+TGG | - | chr7_1:40438300-40438319 | Msa1019210:CDS | 55.0% | |
| GGCCTAAACAGGTCATCCAG+AGG | + | chr7_1:40438414-40438433 | None:intergenic | 55.0% | |
| AAGAGACCAGAAGCCAGGGT+GGG | + | chr7_1:40438595-40438614 | None:intergenic | 55.0% | |
| AAAGAGACCAGAAGCCAGGG+TGG | + | chr7_1:40438596-40438615 | None:intergenic | 55.0% | |
| CCGGGATGAACGGCGTACTA+AGG | + | chr7_1:40432837-40432856 | None:intergenic | 60.0% | |
| TAGTACGCCGTTCATCCCGG+CGG | - | chr7_1:40432837-40432856 | Msa1019210:three_prime_UTR | 60.0% | |
| ! | TGGCGGATCGGATTGAGGTG+AGG | + | chr7_1:40432871-40432890 | None:intergenic | 60.0% |
| !! | GAGAGTGGCGGATCGGATTG+AGG | + | chr7_1:40432876-40432895 | None:intergenic | 60.0% |
| !! | AGGTGGAGAGAGTGGCGGAT+CGG | + | chr7_1:40432883-40432902 | None:intergenic | 60.0% |
| CATGACGTTGGGAGGTGGTG+GGG | + | chr7_1:40432951-40432970 | None:intergenic | 60.0% | |
| GAGCGGAGAGGATTCGTGTG+TGG | + | chr7_1:40433078-40433097 | None:intergenic | 60.0% | |
| TGCGAGTTTCAGGAGCGGAG+AGG | + | chr7_1:40433090-40433109 | None:intergenic | 60.0% | |
| TGGCGACACGGAGTCCGTTA+GGG | + | chr7_1:40433123-40433142 | None:intergenic | 60.0% | |
| !! | TAACGGACTCCGTGTCGCCA+CGG | - | chr7_1:40433123-40433142 | Msa1019210:intron | 60.0% |
| GGACTGCAACCGTTGGGGTT+TGG | - | chr7_1:40433164-40433183 | Msa1019210:intron | 60.0% | |
| TGCCGGGTCGAGATTCGAGA+CGG | - | chr7_1:40433192-40433211 | Msa1019210:CDS | 60.0% | |
| CTCCGTCTCGAATCTCGACC+CGG | + | chr7_1:40433197-40433216 | None:intergenic | 60.0% | |
| GACGGAGAGGAGGAATGCGA+GGG | - | chr7_1:40433264-40433283 | Msa1019210:CDS | 60.0% | |
| AGGGGATGTGCCTGTTGCGT+TGG | - | chr7_1:40433375-40433394 | Msa1019210:intron | 60.0% | |
| GGAAAGCGGTTGCGTGTAGG+TGG | + | chr7_1:40434718-40434737 | None:intergenic | 60.0% | |
| ACGCGTGCTCGCAATCAGGT+AGG | - | chr7_1:40436571-40436590 | Msa1019210:CDS | 60.0% | |
| AGAGACCAGAAGCCAGGGTG+GGG | + | chr7_1:40438594-40438613 | None:intergenic | 60.0% | |
| GCCCGTGTGTGGCTAGGGTT+TGG | + | chr7_1:40432779-40432798 | None:intergenic | 65.0% | |
| TGGGTGTCCGCCGGGATGAA+CGG | + | chr7_1:40432847-40432866 | None:intergenic | 65.0% | |
| AGGTGAGGATGGGTGTCCGC+CGG | + | chr7_1:40432856-40432875 | None:intergenic | 65.0% | |
| TGAAGGGGGTGAGCGGGTGA+CGG | + | chr7_1:40432918-40432937 | None:intergenic | 65.0% | |
| ! | TGGTGGTGAAGGGGGTGAGC+GGG | + | chr7_1:40432924-40432943 | None:intergenic | 65.0% |
| ! | GTGGTGGTGAAGGGGGTGAG+CGG | + | chr7_1:40432925-40432944 | None:intergenic | 65.0% |
| ! | TGGGGAGGGTGGTGGTGAAG+GGG | + | chr7_1:40432933-40432952 | None:intergenic | 65.0% |
| ! | GTGGGGAGGGTGGTGGTGAA+GGG | + | chr7_1:40432934-40432953 | None:intergenic | 65.0% |
| !! | ACGTTGGGAGGTGGTGGGGA+GGG | + | chr7_1:40432947-40432966 | None:intergenic | 65.0% |
| GTGGCGACACGGAGTCCGTT+AGG | + | chr7_1:40433124-40433143 | None:intergenic | 65.0% | |
| GGCTAGACTCCGTGGCGACA+CGG | + | chr7_1:40433135-40433154 | None:intergenic | 65.0% | |
| CGGGTCGAGATTCGAGACGG+AGG | - | chr7_1:40433195-40433214 | Msa1019210:CDS | 65.0% | |
| GGACGGAGAGGAGGAATGCG+AGG | - | chr7_1:40433263-40433282 | Msa1019210:CDS | 65.0% | |
| GTGCTCTCAGCCGGACTGCT+TGG | - | chr7_1:40436480-40436499 | Msa1019210:intron | 65.0% | |
| GTTTCTCCCGAACCCCACCC+TGG | - | chr7_1:40438579-40438598 | Msa1019210:five_prime_UTR | 65.0% | |
| CAGAAGCCAGGGTGGGGTTC+GGG | + | chr7_1:40438588-40438607 | None:intergenic | 65.0% | |
| CCAGAAGCCAGGGTGGGGTT+CGG | + | chr7_1:40438589-40438608 | None:intergenic | 65.0% | |
| GGGCTGCCCGTGTGTGGCTA+GGG | + | chr7_1:40432784-40432803 | None:intergenic | 70.0% | |
| AGGGCTGCCCGTGTGTGGCT+AGG | + | chr7_1:40432785-40432804 | None:intergenic | 70.0% | |
| TGGAGAGGGCTGCCCGTGTG+TGG | + | chr7_1:40432790-40432809 | None:intergenic | 70.0% | |
| GGTGAGGATGGGTGTCCGCC+GGG | + | chr7_1:40432855-40432874 | None:intergenic | 70.0% | |
| GGCGGAGGTGGAGAGAGTGG+CGG | + | chr7_1:40432888-40432907 | None:intergenic | 70.0% | |
| GAAGGGGGTGAGCGGGTGAC+GGG | + | chr7_1:40432917-40432936 | None:intergenic | 70.0% | |
| ! | GGGGAGGGTGGTGGTGAAGG+GGG | + | chr7_1:40432932-40432951 | None:intergenic | 70.0% |
| ! | GGTGGGGAGGGTGGTGGTGA+AGG | + | chr7_1:40432935-40432954 | None:intergenic | 70.0% |
| !! | TTGGGAGGTGGTGGGGAGGG+TGG | + | chr7_1:40432944-40432963 | None:intergenic | 70.0% |
| !! | GACGTTGGGAGGTGGTGGGG+AGG | + | chr7_1:40432948-40432967 | None:intergenic | 70.0% |
| CCGAACCCCACCCTGGCTTC+TGG | - | chr7_1:40438586-40438605 | Msa1019210:five_prime_UTR | 70.0% | |
| GGCGGCGGAGGTGGAGAGAG+TGG | + | chr7_1:40432891-40432910 | None:intergenic | 75.0% | |
| !! | TGAGCGGGTGACGGGAGCGG+CGG | + | chr7_1:40432909-40432928 | None:intergenic | 75.0% |
| !! | GGGTGAGCGGGTGACGGGAG+CGG | + | chr7_1:40432912-40432931 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGGGAGGGTGG+TGG | + | chr7_1:40432941-40432960 | None:intergenic | 75.0% |
| ! | GACGGGAGCGGCGGCGGAGG+TGG | + | chr7_1:40432900-40432919 | None:intergenic | 85.0% |
| !!! | GGTGACGGGAGCGGCGGCGG+AGG | + | chr7_1:40432903-40432922 | None:intergenic | 85.0% |
| !!! | GCGGGTGACGGGAGCGGCGG+CGG | + | chr7_1:40432906-40432925 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40432679 | 40438658 | 40432679 | ID=Msa1019210;Name=Msa1019210 |
| chr7_1 | mRNA | 40432679 | 40438658 | 40432679 | ID=Msa1019210-mRNA-1;Parent=Msa1019210;Name=Msa1019210-mRNA-1;_AED=0.05;_eAED=0.05;_QI=133|1|1|1|1|1|9|324|532 |
| chr7_1 | exon | 40432679 | 40433089 | 40432679 | ID=Msa1019210-mRNA-1:exon:7853;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40433177 | 40433284 | 40433177 | ID=Msa1019210-mRNA-1:exon:7852;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40433537 | 40433602 | 40433537 | ID=Msa1019210-mRNA-1:exon:7851;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40434749 | 40434847 | 40434749 | ID=Msa1019210-mRNA-1:exon:7850;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40435737 | 40435845 | 40435737 | ID=Msa1019210-mRNA-1:exon:7849;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40435940 | 40436091 | 40435940 | ID=Msa1019210-mRNA-1:exon:7848;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40436185 | 40436322 | 40436185 | ID=Msa1019210-mRNA-1:exon:7847;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40436490 | 40436654 | 40436490 | ID=Msa1019210-mRNA-1:exon:7846;Parent=Msa1019210-mRNA-1 |
| chr7_1 | exon | 40437851 | 40438658 | 40437851 | ID=Msa1019210-mRNA-1:exon:7845;Parent=Msa1019210-mRNA-1 |
| chr7_1 | five_prime_UTR | 40438526 | 40438658 | 40438526 | ID=Msa1019210-mRNA-1:five_prime_utr;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40437851 | 40438525 | 40437851 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40436490 | 40436654 | 40436490 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40436185 | 40436322 | 40436185 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40435940 | 40436091 | 40435940 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40435737 | 40435845 | 40435737 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40434749 | 40434847 | 40434749 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40433537 | 40433602 | 40433537 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40433177 | 40433284 | 40433177 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | CDS | 40433003 | 40433089 | 40433003 | ID=Msa1019210-mRNA-1:cds;Parent=Msa1019210-mRNA-1 |
| chr7_1 | three_prime_UTR | 40432679 | 40433002 | 40432679 | ID=Msa1019210-mRNA-1:three_prime_utr;Parent=Msa1019210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
