AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027450 MtrunA17_Chr7g0246311 96.190 525 9 1 1 525 1 514 0.0 1008
Msa1027450 MtrunA17_Chr8g0351231 81.298 524 84 3 1 523 1 511 0.0 791
Msa1027450 MtrunA17_Chr4g0064531 37.037 405 243 8 15 413 15 413 3.56e-85 274
Msa1027450 MtrunA17_Chr4g0064531 41.346 104 58 2 262 362 440 543 4.37e-15 78.2
Msa1027450 MtrunA17_Chr3g0137471 33.409 443 232 12 17 417 17 438 5.94e-68 229
Msa1027450 MtrunA17_Chr3g0137471 37.000 100 60 2 262 358 465 564 4.61e-12 68.6
Msa1027450 MtrunA17_Chr1g0199571 34.074 405 246 12 4 397 3 397 5.04e-63 215
Msa1027450 MtrunA17_Chr1g0156811 32.945 343 219 6 58 395 59 395 4.12e-54 191
Msa1027450 MtrunA17_Chr4g0037111 34.437 302 185 7 38 333 38 332 3.10e-53 183
Msa1027450 MtrunA17_Chr2g0313621 25.676 296 196 11 68 343 74 365 8.65e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027450 AT3G61050.2 75.143 523 116 2 1 523 1 509 0.0 745
Msa1027450 AT3G61050.1 75.143 523 116 2 1 523 1 509 0.0 745
Msa1027450 AT3G61030.1 60.807 347 70 8 18 364 1 281 2.50e-127 381
Msa1027450 AT3G60950.1 59.654 347 81 6 18 364 1 288 2.41e-124 378
Msa1027450 AT1G05500.1 40.863 394 221 8 1 388 1 388 1.05e-97 307
Msa1027450 AT1G05500.1 37.113 97 60 1 262 357 434 530 2.03e-12 70.1
Msa1027450 AT5G04220.2 35.813 363 209 9 61 416 62 407 1.71e-66 224
Msa1027450 AT5G04220.3 35.933 359 206 9 65 416 4 345 1.79e-65 220
Msa1027450 AT1G05500.2 42.000 250 134 7 144 388 1 244 8.16e-57 195
Msa1027450 AT1G05500.2 37.113 97 60 1 262 357 290 386 2.55e-12 69.3
Msa1027450 AT1G20080.2 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1027450 AT1G20080.3 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1027450 AT1G20080.4 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1027450 AT1G20080.1 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1027450 AT1G20080.5 30.250 400 259 9 1 395 11 395 5.23e-56 196
Msa1027450 AT2G20990.1 30.484 351 231 7 58 401 59 403 6.04e-52 185
Msa1027450 AT2G20990.2 28.533 375 231 7 58 401 59 427 2.58e-48 176
Msa1027450 AT2G20990.3 28.278 389 228 9 58 401 59 441 3.56e-45 167
Msa1027450 AT5G04220.1 32.828 198 113 6 224 416 3 185 1.27e-21 96.3
Msa1027450 AT3G14590.2 25.926 297 196 11 68 343 70 363 3.04e-14 76.3
Msa1027450 AT3G14590.3 25.926 297 196 11 68 343 39 332 3.22e-14 75.9
Msa1027450 AT3G14590.1 25.926 297 196 11 68 343 25 318 4.03e-14 75.9
Msa1027450 AT1G53590.1 26.351 296 195 10 68 343 70 362 5.77e-14 75.1

Find 157 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTATTCAAAATTGAATT+TGG 0.157199 7_1:+59865354 Msa1027450:five_prime_UTR
TCTTAAACACGTTTCTAAAT+TGG 0.176233 7_1:+59865298 Msa1027450:five_prime_UTR
TCTTTAAGTCGTCTCTATTC+AGG 0.198526 7_1:-59866744 None:intergenic
TTGAAAGAGGAAGGAGTTAT+TGG 0.202802 7_1:+59872471 Msa1027450:CDS
GGGAAAATGGGTTTGTTCTT+TGG 0.208832 7_1:+59865397 Msa1027450:exon
TGGTGATCCTAATATTGTTT+TGG 0.213144 7_1:+59869868 Msa1027450:CDS
GTGATTGGAATTTGGGAAAA+TGG 0.216216 7_1:+59865384 Msa1027450:exon
ATAACAACTTGAATCCAATT+TGG 0.233940 7_1:+59871332 Msa1027450:CDS
GGAAAATGGGTTTGTTCTTT+GGG 0.234006 7_1:+59865398 Msa1027450:exon
GCGTAGCTGTGATTGGAATT+TGG 0.234272 7_1:+59865376 Msa1027450:five_prime_UTR
TGTTGCGTCAATTCCTATTC+AGG 0.249460 7_1:+59869904 Msa1027450:CDS
TCAACACCCAAAACAATATT+AGG 0.266728 7_1:-59869875 None:intergenic
TCGAATTCCTCATTCCAAAT+TGG 0.268535 7_1:-59871346 None:intergenic
AGCAAATGATCTAAAGAATA+TGG 0.282376 7_1:+59871234 Msa1027450:CDS
TTCAGAGTGTAATCAATTCT+AGG 0.288525 7_1:-59870652 None:intergenic
GGAAGTTTGACGGCACTTCC+TGG 0.345129 7_1:+59870685 Msa1027450:CDS
CGTAGCTGTGATTGGAATTT+GGG 0.346397 7_1:+59865377 Msa1027450:five_prime_UTR
TTGGAATATAACACGGATAA+TGG 0.354649 7_1:-59870032 None:intergenic
CAGCTTAGTCTAACCTGAAT+AGG 0.359538 7_1:-59869917 None:intergenic
GTTATTCGGCGTAGCATTGA+TGG 0.368041 7_1:+59865435 Msa1027450:CDS
ACAGGGAAAGATATCCATTC+AGG 0.383895 7_1:-59866787 None:intergenic
TCAGTAGTTGGTTCTGGTGC+TGG 0.393526 7_1:+59872525 Msa1027450:CDS
GGAATTGTTGGCAGTGGGCT+TGG 0.394317 7_1:+59872645 Msa1027450:CDS
CATCGGATTGTTGTTCCACT+TGG 0.398534 7_1:+59870864 Msa1027450:CDS
CTAAAGAATATGGAAATGAT+TGG 0.409580 7_1:+59871244 Msa1027450:CDS
GCAGCATCAGTAGTTGGTTC+TGG 0.412024 7_1:+59872519 Msa1027450:CDS
CGCCACAAATGGCCACAACT+TGG 0.412096 7_1:-59867083 None:intergenic
AGGCACACCTGCTCATATAC+AGG 0.414272 7_1:-59866805 None:intergenic
CTTTAAGTCGTCTCTATTCA+GGG 0.416375 7_1:-59866743 None:intergenic
GGTGCTGGACTCGTTGGAAC+TGG 0.416389 7_1:+59872540 Msa1027450:CDS
GTGTAATCAATTCTAGGCTT+TGG 0.419916 7_1:-59870646 None:intergenic
AGTGGAATTGGTGCTGGAGC+TGG 0.421440 7_1:+59872591 Msa1027450:CDS
ACTGGAATCGGCGCTGGAGC+TGG 0.428890 7_1:+59872558 Msa1027450:CDS
GCTTCAGTTGAAGGATCTCC+AGG 0.430591 7_1:+59870003 Msa1027450:intron
TGATTGGAATTTGGGAAAAT+GGG 0.431805 7_1:+59865385 Msa1027450:exon
GGAGCTGGAATTGTTGGCAG+TGG 0.438232 7_1:+59872639 Msa1027450:CDS
GGGCTTGGTGCCGTTGGCAG+TGG 0.438797 7_1:+59872660 Msa1027450:CDS
GGAATGGTGGGAAGTGGAAT+TGG 0.440702 7_1:+59872579 Msa1027450:CDS
TCGAGGAACCTTGAGAATAA+AGG 0.442200 7_1:+59872095 Msa1027450:CDS
AGTGGATTCGGTGCTGGAGC+TGG 0.442751 7_1:+59872624 Msa1027450:CDS
GAATTTGGCGTAGCTGTGAT+TGG 0.444803 7_1:+59865369 Msa1027450:five_prime_UTR
AACAACAACAGCAGAAATGC+AGG 0.446070 7_1:-59870071 None:intergenic
GTGGTGAAAATTTACCTGAA+TGG 0.451737 7_1:+59866773 Msa1027450:CDS
ATAGATTGAACACTAATAGA+AGG 0.452327 7_1:+59872949 Msa1027450:three_prime_UTR
GGAATGGTGGGAAGTGGATT+CGG 0.455276 7_1:+59872612 Msa1027450:CDS
CGGATTGTTGTTCCACTTGG+TGG 0.456780 7_1:+59870867 Msa1027450:CDS
AAACCTCGACAGTGAGTGAC+TGG 0.457183 7_1:-59871393 None:intergenic
AACTTCAACGAAGAAATTCC+AGG 0.459075 7_1:-59868591 None:intergenic
CAGTCACTTTAAGTATTCCC+TGG 0.459434 7_1:-59871204 None:intergenic
AGGAAGAAATTGAAAGAGGA+AGG 0.459781 7_1:+59872462 Msa1027450:CDS
GCAGTTGACGTTAAACTCCT+TGG 0.462122 7_1:+59866718 Msa1027450:CDS
CTTGAATCCAATTTGGAATG+AGG 0.464090 7_1:+59871339 Msa1027450:CDS
GGCAGTGGACTGAGCAAGGC+AGG 0.466321 7_1:+59872675 Msa1027450:CDS
AATGGACATTGATTTCCGTT+GGG 0.469120 7_1:+59869844 Msa1027450:CDS
GACGACTTAAAGAAAATTTG+TGG 0.470475 7_1:+59866754 Msa1027450:CDS
TAATGGACATTGATTTCCGT+TGG 0.470814 7_1:+59869843 Msa1027450:CDS
AATTGGTGCTGGAGCTGGAA+TGG 0.471647 7_1:+59872596 Msa1027450:CDS
CACGGATAATGGTGAAAACC+TGG 0.473508 7_1:-59870021 None:intergenic
ATTACTATCTTGACGTGTCC+AGG 0.474899 7_1:-59872822 None:intergenic
TTAGAAGAGTATAGACCTCC+TGG 0.475646 7_1:+59868573 Msa1027450:CDS
GTTGGAACTGGAATCGGCGC+TGG 0.475798 7_1:+59872552 Msa1027450:CDS
TAAAGAATATGGAAATGATT+GGG 0.477054 7_1:+59871245 Msa1027450:CDS
TTCATGGGCAGGACAATCAC+AGG 0.480614 7_1:+59872702 Msa1027450:CDS
GAGCTGGAATTGTTGGCAGT+GGG 0.481909 7_1:+59872640 Msa1027450:CDS
TATTTATACCTTTATTCTCA+AGG 0.481933 7_1:-59872103 None:intergenic
GGTGCTGGAGCTGGAATTGT+TGG 0.485490 7_1:+59872633 Msa1027450:CDS
GTGGGAAGTGGATTCGGTGC+TGG 0.485823 7_1:+59872618 Msa1027450:CDS
GGCAGTGGGCTTGGTGCCGT+TGG 0.486406 7_1:+59872654 Msa1027450:CDS
TCTTTAATGTGGAGGAAAGT+GGG 0.487364 7_1:+59872769 Msa1027450:CDS
ATCTTTCCCTGTATATGAGC+AGG 0.487917 7_1:+59866798 Msa1027450:CDS
GAGCAAGGCAGGAAAGTTCA+TGG 0.488649 7_1:+59872686 Msa1027450:CDS
GGACTCGTTGGAACTGGAAT+CGG 0.491658 7_1:+59872546 Msa1027450:CDS
AGTCACTTTAAGTATTCCCT+GGG 0.492552 7_1:-59871203 None:intergenic
ATCTACTCCTGTCTTTAATG+TGG 0.492962 7_1:+59872758 Msa1027450:CDS
ATTGAAAGTAAAAGATAAGA+AGG 0.493082 7_1:+59872071 Msa1027450:CDS
GTGGGAAGTGGAATTGGTGC+TGG 0.493539 7_1:+59872585 Msa1027450:CDS
GGCAGTTGGTGGAAGTTTGA+CGG 0.494194 7_1:+59870675 Msa1027450:CDS
GTCTTTAATGTGGAGGAAAG+TGG 0.495600 7_1:+59872768 Msa1027450:CDS
GTGGTACTCCTGTGGATACT+AGG 0.497141 7_1:+59870886 Msa1027450:CDS
CGAATATGCACAACTACGTA+AGG 0.497415 7_1:-59871277 None:intergenic
AATCGGCGCTGGAGCTGGAA+TGG 0.499597 7_1:+59872563 Msa1027450:CDS
GCGTAGCATTGATGGCTGGA+TGG 0.502557 7_1:+59865443 Msa1027450:CDS
GTCCAAGTTGTGGCCATTTG+TGG 0.503937 7_1:+59867081 Msa1027450:CDS
GACGGAGCAGCATCAGTAGT+TGG 0.508775 7_1:+59872513 Msa1027450:CDS
ACAAAGGAAGAAATTGAAAG+AGG 0.512665 7_1:+59872458 Msa1027450:CDS
TTACTCACATCCGCCACAAA+TGG 0.515079 7_1:-59867094 None:intergenic
CAACAATCCGATGAGGCCAT+TGG 0.515146 7_1:-59870854 None:intergenic
GGAGCTGGAATGGTGGGAAG+TGG 0.515418 7_1:+59872573 Msa1027450:CDS
GGAGCTGGAATGGTGGGAAG+TGG 0.515418 7_1:+59872606 Msa1027450:CDS
ATGAGGCCATTGGAGCATAT+CGG 0.516196 7_1:-59870844 None:intergenic
AAAGGTTACCTCAGCAAGTA+GGG 0.517219 7_1:-59870095 None:intergenic
CAAAGGTTACCTCAGCAAGT+AGG 0.517568 7_1:-59870096 None:intergenic
CCTGGAAGCAGAAACTGAAA+AGG 0.518313 7_1:+59872014 Msa1027450:CDS
AAGTTCAGTAAGCTGTCCCT+TGG 0.527726 7_1:+59868609 Msa1027450:CDS
GGCGCTGGAGCTGGAATGGT+GGG 0.527757 7_1:+59872567 Msa1027450:CDS
GGTTCTGGTGCTGGACTCGT+TGG 0.530249 7_1:+59872534 Msa1027450:CDS
ATATGCTCCAATGGCCTCAT+CGG 0.533627 7_1:+59870847 Msa1027450:CDS
CGTAGCATTGATGGCTGGAT+GGG 0.533942 7_1:+59865444 Msa1027450:CDS
TCTGCTTCCAGGTTAATAAG+TGG 0.538169 7_1:-59872003 None:intergenic
TTCGGCGTAGCATTGATGGC+TGG 0.539361 7_1:+59865439 Msa1027450:CDS
TGATCTGGAGCTTAAACCCC+AGG 0.542723 7_1:+59871186 Msa1027450:CDS
CGGCGCTGGAGCTGGAATGG+TGG 0.546378 7_1:+59872566 Msa1027450:CDS
CGTTGGCAGTGGACTGAGCA+AGG 0.551865 7_1:+59872671 Msa1027450:CDS
TACACTCTGAAGGCAGTTGG+TGG 0.552513 7_1:+59870664 Msa1027450:CDS
CGACTTGATTGCAGAAGACA+AGG 0.553113 7_1:+59871366 Msa1027450:CDS
ATTGGGCAAGATAAACGATT+GGG 0.553397 7_1:+59871967 Msa1027450:CDS
AGGCAGGAAAGTTCATGGGC+AGG 0.553405 7_1:+59872691 Msa1027450:CDS
CTTTCCTCCACATTAAAGAC+AGG 0.556324 7_1:-59872765 None:intergenic
TAGAATTGATTACACTCTGA+AGG 0.557093 7_1:+59870654 Msa1027450:CDS
ATACCTTAGCAATTCTCTTG+CGG 0.559331 7_1:-59865489 None:intergenic
GATTACACTCTGAAGGCAGT+TGG 0.559945 7_1:+59870661 Msa1027450:CDS
TCCACTTGGTGGTACTCCTG+TGG 0.560366 7_1:+59870878 Msa1027450:CDS
ATGGACATTGATTTCCGTTG+GGG 0.568773 7_1:+59869845 Msa1027450:CDS
AGGGGATCTCTTCTGCGAGT+TGG 0.573126 7_1:-59870051 None:intergenic
TACTCCTGTCTTTAATGTGG+AGG 0.574175 7_1:+59872761 Msa1027450:CDS
CATTGGGCAAGATAAACGAT+TGG 0.574761 7_1:+59871966 Msa1027450:CDS
ACAAGCAGCTGTCCAAGTTG+TGG 0.582444 7_1:+59867071 Msa1027450:CDS
TGTTGTTGCCCTACTTGCTG+AGG 0.583278 7_1:+59870087 Msa1027450:CDS
AAAATTGCCACTTATTAACC+TGG 0.583892 7_1:+59871996 Msa1027450:CDS
TCAATCATATCTGAAAGTCC+AGG 0.587718 7_1:-59870703 None:intergenic
TTGTTACCGATATGCTCCAA+TGG 0.587786 7_1:+59870838 Msa1027450:CDS
GACATTGATTTCCGTTGGGG+TGG 0.590508 7_1:+59869848 Msa1027450:CDS
CGTCTCTATTCAGGGATCCA+AGG 0.592966 7_1:-59866735 None:intergenic
ATTTAACAAGGAAGAACAGA+TGG 0.593114 7_1:+59872404 Msa1027450:CDS
GGTGCTGGAGCTGGAATGGT+GGG 0.593307 7_1:+59872600 Msa1027450:CDS
AGCAAGGCAGGAAAGTTCAT+GGG 0.593411 7_1:+59872687 Msa1027450:CDS
CTTGCTCAGTCCACTGCCAA+CGG 0.593603 7_1:-59872670 None:intergenic
GACAGGAGTAGATGAACCGC+TGG 0.594016 7_1:-59872748 None:intergenic
TGGTGCTGGAGCTGGAATGG+TGG 0.595978 7_1:+59872599 Msa1027450:CDS
CTTTAATGTGGAGGAAAGTG+GGG 0.602558 7_1:+59872770 Msa1027450:CDS
CAAGTTGTGGCCATTTGTGG+CGG 0.614878 7_1:+59867084 Msa1027450:CDS
CTGCGAGTTGGAATATAACA+CGG 0.615766 7_1:-59870039 None:intergenic
AAGCCGCAAGAGAATTGCTA+AGG 0.617810 7_1:+59865486 Msa1027450:CDS
AGTACAATGGACGCGCTAGA+CGG 0.619163 7_1:+59872495 Msa1027450:CDS
AACCTCGACAGTGAGTGACT+GGG 0.624024 7_1:-59871392 None:intergenic
AGGAGTTATTGGAAGTACAA+TGG 0.624734 7_1:+59872482 Msa1027450:CDS
CAGGGCAAACTGTATCGAGA+AGG 0.626227 7_1:+59872721 Msa1027450:CDS
TCACACTACCTAGTATCCAC+AGG 0.626835 7_1:-59870894 None:intergenic
GTAAAAGATAAGAAGGATCG+AGG 0.631810 7_1:+59872078 Msa1027450:CDS
TTTAATGTGGAGGAAAGTGG+GGG 0.634849 7_1:+59872771 Msa1027450:CDS
GACCCAGTCACTCACTGTCG+AGG 0.635610 7_1:+59871390 Msa1027450:CDS
GGTCTATACTCTTCTAATAG+CGG 0.643171 7_1:-59868567 None:intergenic
ACTCTTTAAAGTCAAAACAA+AGG 0.644094 7_1:+59871303 Msa1027450:CDS
ACAACAACAGCAGAAATGCA+GGG 0.646634 7_1:-59870070 None:intergenic
TTTCTATCATGAATTTAACA+AGG 0.648565 7_1:+59872392 Msa1027450:CDS
CTGAAAAGGAAATTGAACTG+AGG 0.654965 7_1:+59872028 Msa1027450:CDS
TATTAGGATCACCACCCCAA+CGG 0.666944 7_1:-59869859 None:intergenic
CAACAACAGCAGAAATGCAG+GGG 0.674311 7_1:-59870069 None:intergenic
TCCACAGGAGTACCACCAAG+TGG 0.679811 7_1:-59870879 None:intergenic
GAATATGCACAACTACGTAA+GGG 0.686841 7_1:-59871276 None:intergenic
GGCACACCTGCTCATATACA+GGG 0.691019 7_1:-59866804 None:intergenic
GTATCGAGAAGGAGTGCCAG+CGG 0.703865 7_1:+59872732 Msa1027450:CDS
GTCACTTTAAGTATTCCCTG+GGG 0.708077 7_1:-59871202 None:intergenic
GATCTGGAGCTTAAACCCCA+GGG 0.715206 7_1:+59871187 Msa1027450:CDS
TCATGGGCAGGACAATCACA+GGG 0.718450 7_1:+59872703 Msa1027450:CDS
AGTGGAACAACAATCCGATG+AGG 0.732800 7_1:-59870861 None:intergenic
TTCAACGAAGAAATTCCAGG+AGG 0.772265 7_1:-59868588 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTAAAAATTTCAAATTT+TGG - chr7_1:59866278-59866297 None:intergenic 10.0%
!!! ATTTCTTTTGTTAAATAAAA+TGG - chr7_1:59866633-59866652 None:intergenic 10.0%
!! AAAAAAAAAGATACAAAATA+TGG - chr7_1:59869445-59869464 None:intergenic 10.0%
!!! TTTTATGATAAAAATATTTC+AGG + chr7_1:59869539-59869558 Msa1027450:intron 10.0%
!!! AAATATTGATTATCAAATAT+AGG - chr7_1:59870989-59871008 None:intergenic 10.0%
!!! CAAATATTTTAAATTACTTA+AGG + chr7_1:59871147-59871166 Msa1027450:intron 10.0%
!! ACAAATCAATAAAAAATTAA+GGG - chr7_1:59871804-59871823 None:intergenic 10.0%
!! AACAAATCAATAAAAAATTA+AGG - chr7_1:59871805-59871824 None:intergenic 10.0%
!! AAGAAAAAAGAAAAATGAAA+AGG + chr7_1:59866537-59866556 Msa1027450:intron 15.0%
!! AGAAAAAAGAAAAATGAAAA+GGG + chr7_1:59866538-59866557 Msa1027450:intron 15.0%
!!! AAACTCTATTTATTGTTTTT+TGG + chr7_1:59866934-59866953 Msa1027450:intron 15.0%
!!! ATTAGTTTGTTTATTTGTTA+TGG + chr7_1:59867213-59867232 Msa1027450:intron 15.0%
!!! TAATCATTATATTTTAGACT+CGG - chr7_1:59867892-59867911 None:intergenic 15.0%
!! AGATGAAAAAATAAAAAACA+TGG - chr7_1:59868942-59868961 None:intergenic 15.0%
!! TGATCAATAAATAATAATAG+TGG + chr7_1:59869234-59869253 Msa1027450:intron 15.0%
!!! CTACTTTTTATTGTATTTAA+AGG + chr7_1:59869390-59869409 Msa1027450:intron 15.0%
!! TTATTGTATTTAAAGGATAA+AGG + chr7_1:59869397-59869416 Msa1027450:intron 15.0%
!! TAAAATACTATTAGATGAAA+CGG + chr7_1:59869492-59869511 Msa1027450:intron 15.0%
!!! TCATTAGGAATTTATTTTTT+AGG + chr7_1:59871543-59871562 Msa1027450:intron 15.0%
!!! TTTCATAATAGAATAGTTTT+GGG - chr7_1:59871736-59871755 None:intergenic 15.0%
!!! TTTTCATAATAGAATAGTTT+TGG - chr7_1:59871737-59871756 None:intergenic 15.0%
!! CAAATCAATAAAAAATTAAG+GGG - chr7_1:59871803-59871822 None:intergenic 15.0%
!!! TTATTTTATTGAATCAATCA+TGG - chr7_1:59871901-59871920 None:intergenic 15.0%
!! CTTCTATTCAAAATTGAATT+TGG + chr7_1:59865354-59865373 Msa1027450:five_prime_UTR 20.0%
!! TTTATTTCGACATTAAGAAT+TGG - chr7_1:59865550-59865569 None:intergenic 20.0%
!! AAATTCCACTAATATGTTAT+TGG - chr7_1:59865990-59866009 None:intergenic 20.0%
!! GTACTAACTGTAATTTATTA+TGG + chr7_1:59866587-59866606 Msa1027450:intron 20.0%
!! TAACTGTAATTTATTATGGT+AGG + chr7_1:59866591-59866610 Msa1027450:intron 20.0%
!!! AAATGTCATGTATTAATTTG+TGG + chr7_1:59866649-59866668 Msa1027450:intron 20.0%
!! TTTGCATAAAAATATAGGAA+GGG - chr7_1:59866991-59867010 None:intergenic 20.0%
!!! TTTTGCATAAAAATATAGGA+AGG - chr7_1:59866992-59867011 None:intergenic 20.0%
!!! CACTTTTTGCATAAAAATAT+AGG - chr7_1:59866996-59867015 None:intergenic 20.0%
!!! CTATATTTTTATGCAAAAAG+TGG + chr7_1:59866994-59867013 Msa1027450:intron 20.0%
!!! TTTTAATATCTAGAGTAGTA+AGG - chr7_1:59867791-59867810 None:intergenic 20.0%
!! TGTTTCTTCAAAATTCAAAA+GGG + chr7_1:59868961-59868980 Msa1027450:intron 20.0%
!! AGGGTCAAATAAAAAAATAT+GGG - chr7_1:59869070-59869089 None:intergenic 20.0%
!! TAGGGTCAAATAAAAAAATA+TGG - chr7_1:59869071-59869090 None:intergenic 20.0%
!! TAATTGATATCCAATGATAT+TGG + chr7_1:59869164-59869183 Msa1027450:intron 20.0%
!! TAACTGTATTAAACAGAAAA+TGG - chr7_1:59869213-59869232 None:intergenic 20.0%
!!! TTCTGTTTTAAATTTTAGAG+AGG + chr7_1:59869274-59869293 Msa1027450:intron 20.0%
!! TAAAAAAGGTCAAATCATAA+TGG + chr7_1:59869826-59869845 Msa1027450:CDS 20.0%
!! CAGAATTAGAATATTGAATA+TGG - chr7_1:59870540-59870559 None:intergenic 20.0%
!!! TAATTCTGCATTACTTTTTT+CGG + chr7_1:59870552-59870571 Msa1027450:intron 20.0%
!!! AATCGAATTTGAAATTTTTG+TGG + chr7_1:59871011-59871030 Msa1027450:intron 20.0%
!! TAAAGAATATGGAAATGATT+GGG + chr7_1:59871245-59871264 Msa1027450:CDS 20.0%
!! GAAGAAATAAGAAATTCATT+AGG + chr7_1:59871528-59871547 Msa1027450:intron 20.0%
!!! TTTATTGATTTGTTTCTACA+CGG + chr7_1:59871811-59871830 Msa1027450:intron 20.0%
!! ATTGAAAGTAAAAGATAAGA+AGG + chr7_1:59872071-59872090 Msa1027450:CDS 20.0%
!! TATTTATACCTTTATTCTCA+AGG - chr7_1:59872106-59872125 None:intergenic 20.0%
!! ATGATTAGAAAAGAAATAGA+AGG - chr7_1:59872274-59872293 None:intergenic 20.0%
!! TTTCTATCATGAATTTAACA+AGG + chr7_1:59872392-59872411 Msa1027450:CDS 20.0%
!! TTCCAAAAACTAAAATATTC+AGG - chr7_1:59872855-59872874 None:intergenic 20.0%
!!! TAATATGATGCTTTTTTCAT+TGG + chr7_1:59872924-59872943 Msa1027450:three_prime_UTR 20.0%
! TCTTAAACACGTTTCTAAAT+TGG + chr7_1:59865298-59865317 Msa1027450:five_prime_UTR 25.0%
!! TTATTTAAGATGTCATCAGT+TGG + chr7_1:59865579-59865598 Msa1027450:intron 25.0%
! ATGAACTATGTTTGGTATTA+TGG - chr7_1:59865745-59865764 None:intergenic 25.0%
! TTAACAAAAATTGATCATGC+TGG + chr7_1:59865788-59865807 Msa1027450:intron 25.0%
!! CTAATATGTTATTGGTTGTT+TGG - chr7_1:59865982-59866001 None:intergenic 25.0%
! AACAACCAATAACATATTAG+TGG + chr7_1:59865982-59866001 Msa1027450:intron 25.0%
!! TGGAATTTGACTTATTAGTA+AGG + chr7_1:59866002-59866021 Msa1027450:intron 25.0%
! TAGGTGAAAAAGAATCATAT+AGG + chr7_1:59866049-59866068 Msa1027450:intron 25.0%
! AGGTGAAAAAGAATCATATA+GGG + chr7_1:59866050-59866069 Msa1027450:intron 25.0%
! TCATATAAGTCTTCTCAAAA+AGG - chr7_1:59866206-59866225 None:intergenic 25.0%
! TTTACAAATGATCCTATCAT+AGG + chr7_1:59866869-59866888 Msa1027450:intron 25.0%
! GAAAAAAAAAACCATCAACA+AGG - chr7_1:59867036-59867055 None:intergenic 25.0%
!!! TGTTGATGGTTTTTTTTTTC+AGG + chr7_1:59867036-59867055 Msa1027450:intron 25.0%
!!! GTTTTTTTTTTCAGGTGAAA+TGG + chr7_1:59867044-59867063 Msa1027450:intron 25.0%
! ATTCTGATAAAATCTATGCT+GGG + chr7_1:59867387-59867406 Msa1027450:intron 25.0%
! GTATCTATTTATACATTGTG+TGG + chr7_1:59867457-59867476 Msa1027450:intron 25.0%
!!! GCTGATTTTTTTTATTGACA+CGG - chr7_1:59867587-59867606 None:intergenic 25.0%
! TAGATTAGGGAAAAGAAATA+TGG + chr7_1:59867688-59867707 Msa1027450:intron 25.0%
! TTAGGTTTATTCATGTTATC+TGG - chr7_1:59868139-59868158 None:intergenic 25.0%
! TTACACTGAAATGAACAATA+CGG + chr7_1:59868231-59868250 Msa1027450:intron 25.0%
!!! ATTTTTGTTTAAGGAATGCA+AGG - chr7_1:59868384-59868403 None:intergenic 25.0%
!!! TTGTTTGTGTTTGCTTTTTT+AGG + chr7_1:59868512-59868531 Msa1027450:intron 25.0%
! TATATTTGAATCTACCTAGT+TGG + chr7_1:59868741-59868760 Msa1027450:intron 25.0%
!! AATATCTAGATAACTTGCAT+CGG - chr7_1:59868915-59868934 None:intergenic 25.0%
!! CTGTTTCTTCAAAATTCAAA+AGG + chr7_1:59868960-59868979 Msa1027450:intron 25.0%
! GTTTCTTCAAAATTCAAAAG+GGG + chr7_1:59868962-59868981 Msa1027450:intron 25.0%
! TTTCTTCAAAATTCAAAAGG+GGG + chr7_1:59868963-59868982 Msa1027450:intron 25.0%
! ATTAAGTTACAAGAGACAAA+AGG - chr7_1:59869030-59869049 None:intergenic 25.0%
! TTGTCTCTTGTAACTTAATT+TGG + chr7_1:59869031-59869050 Msa1027450:intron 25.0%
!!! TTTTTATTTGACCCTAACTT+TGG + chr7_1:59869075-59869094 Msa1027450:intron 25.0%
! TGAAACGGATAAATAGAATT+TGG + chr7_1:59869507-59869526 Msa1027450:intron 25.0%
!! TAACAACAATTTTGCTTGTT+AGG + chr7_1:59869587-59869606 Msa1027450:intron 25.0%
! AAAATGTCGACATCATTAAT+AGG + chr7_1:59869625-59869644 Msa1027450:intron 25.0%
! TAATATCAACTTCATCTTGT+GGG - chr7_1:59870297-59870316 None:intergenic 25.0%
! AACATCCTACAATGATAAAT+CGG - chr7_1:59870424-59870443 None:intergenic 25.0%
! CCACTTAATTCAAAATCTAA+GGG - chr7_1:59870474-59870493 None:intergenic 25.0%
! TCCACTTAATTCAAAATCTA+AGG - chr7_1:59870475-59870494 None:intergenic 25.0%
!!! TTACTTTTTTCGGAATTACT+TGG + chr7_1:59870562-59870581 Msa1027450:intron 25.0%
!!! TACTTTTTTCGGAATTACTT+GGG + chr7_1:59870563-59870582 Msa1027450:intron 25.0%
! AATCAGTTTAAGAGGAAAAA+GGG - chr7_1:59870753-59870772 None:intergenic 25.0%
! AAATCAGTTTAAGAGGAAAA+AGG - chr7_1:59870754-59870773 None:intergenic 25.0%
! TTCTTCAAAATCAGTTTAAG+AGG - chr7_1:59870761-59870780 None:intergenic 25.0%
! AAGAGACAAAAACATTGAAA+CGG - chr7_1:59871061-59871080 None:intergenic 25.0%
! TTGAGCATTAACATCAAAAT+TGG - chr7_1:59871130-59871149 None:intergenic 25.0%
! AGCAAATGATCTAAAGAATA+TGG + chr7_1:59871234-59871253 Msa1027450:CDS 25.0%
! CTAAAGAATATGGAAATGAT+TGG + chr7_1:59871244-59871263 Msa1027450:CDS 25.0%
!!! TTTGTTTTGACTTTAAAGAG+TGG - chr7_1:59871304-59871323 None:intergenic 25.0%
!!! ACTCTTTAAAGTCAAAACAA+AGG + chr7_1:59871303-59871322 Msa1027450:CDS 25.0%
! ATAACAACTTGAATCCAATT+TGG + chr7_1:59871332-59871351 Msa1027450:CDS 25.0%
!!! ATTTTGCTTTCATTAGTTCT+AGG + chr7_1:59871472-59871491 Msa1027450:intron 25.0%
!! TAGGTTTTTGATAAAGACAT+TGG + chr7_1:59871949-59871968 Msa1027450:intron 25.0%
!! AGGTTTTTGATAAAGACATT+GGG + chr7_1:59871950-59871969 Msa1027450:intron 25.0%
! TTCAAACTTGTGATGTAATT+AGG - chr7_1:59872213-59872232 None:intergenic 25.0%
! TAAATGAATACAGAATAGCA+AGG - chr7_1:59872320-59872339 None:intergenic 25.0%
! AAAAAATGACACTAGAACAA+AGG + chr7_1:59872442-59872461 Msa1027450:CDS 25.0%
!!! GACCTGAATATTTTAGTTTT+TGG + chr7_1:59872850-59872869 Msa1027450:three_prime_UTR 25.0%
! ATAGATTGAACACTAATAGA+AGG + chr7_1:59872949-59872968 Msa1027450:three_prime_UTR 25.0%
TGATTGGAATTTGGGAAAAT+GGG + chr7_1:59865385-59865404 Msa1027450:exon 30.0%
!!! TTTGTTCTTTGGGATTTTTC+TGG + chr7_1:59865408-59865427 Msa1027450:CDS 30.0%
!!! TTGTTCTTTGGGATTTTTCT+GGG + chr7_1:59865409-59865428 Msa1027450:CDS 30.0%
TATCATGCTTAGTGTTTGTT+TGG + chr7_1:59865622-59865641 Msa1027450:intron 30.0%
AACTATGTTTGGTATTATGG+TGG - chr7_1:59865742-59865761 None:intergenic 30.0%
TACACTCTATGAACTATGTT+TGG - chr7_1:59865753-59865772 None:intergenic 30.0%
TAGTTCATAGAGTGTATGTT+TGG + chr7_1:59865757-59865776 Msa1027450:intron 30.0%
!! ATTGTTTCTAATGTGAAGCT+AGG - chr7_1:59865895-59865914 None:intergenic 30.0%
ATCGATGTCCTCTATATATA+CGG + chr7_1:59866108-59866127 Msa1027450:intron 30.0%
TAATCATAATCACACACAGA+AGG + chr7_1:59866176-59866195 Msa1027450:intron 30.0%
AACAAAGTCTGAGAATTTGT+AGG - chr7_1:59866331-59866350 None:intergenic 30.0%
GAAGAAGACAAGAAAAACAA+GGG + chr7_1:59866513-59866532 Msa1027450:intron 30.0%
AATGAAAAGGGAAACATAGT+AGG + chr7_1:59866550-59866569 Msa1027450:intron 30.0%
!! CATTATTCATTTTTCTCTGC+AGG + chr7_1:59866696-59866715 Msa1027450:intron 30.0%
GACGACTTAAAGAAAATTTG+TGG + chr7_1:59866754-59866773 Msa1027450:CDS 30.0%
AAAGAGAACAGACATAGTAT+AGG - chr7_1:59866962-59866981 None:intergenic 30.0%
AAAATGTTTGACCTTGTTGA+TGG + chr7_1:59867022-59867041 Msa1027450:intron 30.0%
! TGGATTAGAACTGTTGATTA+TGG + chr7_1:59867289-59867308 Msa1027450:intron 30.0%
! GGATTAGAACTGTTGATTAT+GGG + chr7_1:59867290-59867309 Msa1027450:intron 30.0%
! TTTGAGTTTCTGAACTATGT+TGG - chr7_1:59867348-59867367 None:intergenic 30.0%
GATTCTGATAAAATCTATGC+TGG + chr7_1:59867386-59867405 Msa1027450:intron 30.0%
TTCTGATAAAATCTATGCTG+GGG + chr7_1:59867388-59867407 Msa1027450:intron 30.0%
GAAAAGAAATATGGATGCAA+TGG + chr7_1:59867697-59867716 Msa1027450:intron 30.0%
! AACTAGAGTTTTTGACAATG+AGG - chr7_1:59867749-59867768 None:intergenic 30.0%
GATATTAAAATCGAGCTAAC+TGG + chr7_1:59867801-59867820 Msa1027450:intron 30.0%
!! AATTCTAAGATGTGCATCTT+AGG - chr7_1:59867928-59867947 None:intergenic 30.0%
! TCATTCATCTGTTGCATTTT+GGG - chr7_1:59867959-59867978 None:intergenic 30.0%
! ATCATTCATCTGTTGCATTT+TGG - chr7_1:59867960-59867979 None:intergenic 30.0%
AATGCAACAGATGAATGATA+AGG + chr7_1:59867961-59867980 Msa1027450:intron 30.0%
! CGAACATACAATGTTTTCAA+AGG - chr7_1:59868331-59868350 None:intergenic 30.0%
GAAAAACAGTCTATGTTCTT+TGG + chr7_1:59868350-59868369 Msa1027450:intron 30.0%
GAATGAAAGCCAAAGTTTAA+AGG - chr7_1:59868432-59868451 None:intergenic 30.0%
TTTCATTCCTAATCTTCCTT+TGG + chr7_1:59868444-59868463 Msa1027450:intron 30.0%
TTCATTCCTAATCTTCCTTT+GGG + chr7_1:59868445-59868464 Msa1027450:intron 30.0%
GTGTATAAAGTCAGATAATG+TGG + chr7_1:59868822-59868841 Msa1027450:intron 30.0%
AAAATCTTGTTACACGAATC+AGG - chr7_1:59868890-59868909 None:intergenic 30.0%
! CTCTTGTAACTTAATTTGGT+TGG + chr7_1:59869035-59869054 Msa1027450:intron 30.0%
TGCATACATATAAAACGAGA+AGG + chr7_1:59869303-59869322 Msa1027450:intron 30.0%
TATAAAACGAGAAGGAAACT+CGG + chr7_1:59869311-59869330 Msa1027450:intron 30.0%
! GTGCTAGTTTAAAAAGATCA+TGG - chr7_1:59869423-59869442 None:intergenic 30.0%
! CAAGCAAAATTGTTGTTACA+AGG - chr7_1:59869585-59869604 None:intergenic 30.0%
TTATTGAACAATACTGACAG+GGG - chr7_1:59869682-59869701 None:intergenic 30.0%
CTTATTGAACAATACTGACA+GGG - chr7_1:59869683-59869702 None:intergenic 30.0%
! TGGTGATCCTAATATTGTTT+TGG + chr7_1:59869868-59869887 Msa1027450:CDS 30.0%
! GGTGATCCTAATATTGTTTT+GGG + chr7_1:59869869-59869888 Msa1027450:CDS 30.0%
TCAACACCCAAAACAATATT+AGG - chr7_1:59869878-59869897 None:intergenic 30.0%
TATTGAATTTCATGTCACTG+AGG + chr7_1:59869948-59869967 Msa1027450:intron 30.0%
TTGGAATATAACACGGATAA+TGG - chr7_1:59870035-59870054 None:intergenic 30.0%
!! AATTTTAGATTGATTCACCC+CGG - chr7_1:59870198-59870217 None:intergenic 30.0%
CTAATATCAACTTCATCTTG+TGG - chr7_1:59870298-59870317 None:intergenic 30.0%
AGATAATTGATCCCTTCATA+TGG + chr7_1:59870356-59870375 Msa1027450:intron 30.0%
!! GTTTACCGATTTATCATTGT+AGG + chr7_1:59870416-59870435 Msa1027450:intron 30.0%
TATCATTGTAGGATGTTGTT+AGG + chr7_1:59870427-59870446 Msa1027450:intron 30.0%
ATCATTGTAGGATGTTGTTA+GGG + chr7_1:59870428-59870447 Msa1027450:intron 30.0%
! CCCTTAGATTTTGAATTAAG+TGG + chr7_1:59870471-59870490 Msa1027450:intron 30.0%
! AGATTTTGAATTAAGTGGAC+TGG + chr7_1:59870476-59870495 Msa1027450:intron 30.0%
!! GATTTTGAATTAAGTGGACT+GGG + chr7_1:59870477-59870496 Msa1027450:intron 30.0%
!! AATTTCTGTTTCTATTCCCT+TGG + chr7_1:59870514-59870533 Msa1027450:intron 30.0%
AGAATATTGAATATGGCCAA+GGG - chr7_1:59870533-59870552 None:intergenic 30.0%
TAGAATATTGAATATGGCCA+AGG - chr7_1:59870534-59870553 None:intergenic 30.0%
TTGGCTGATTAAATGTTTCA+TGG - chr7_1:59870630-59870649 None:intergenic 30.0%
TTCAGAGTGTAATCAATTCT+AGG - chr7_1:59870655-59870674 None:intergenic 30.0%
TAGAATTGATTACACTCTGA+AGG + chr7_1:59870654-59870673 Msa1027450:CDS 30.0%
! TATTTTACCCACCATTTCAT+AGG + chr7_1:59870800-59870819 Msa1027450:intron 30.0%
!!! TCTTTTGTCACTTTGAAAGA+AGG + chr7_1:59871077-59871096 Msa1027450:intron 30.0%
!!! CTTTTGTCACTTTGAAAGAA+GGG + chr7_1:59871078-59871097 Msa1027450:intron 30.0%
AGGGAAAACAAATTCTGATT+TGG + chr7_1:59871097-59871116 Msa1027450:intron 30.0%
ATAACGTGATAGTAACTGAA+CGG - chr7_1:59871658-59871677 None:intergenic 30.0%
! ATTTTCATGACTCTGCAAAT+AGG + chr7_1:59871930-59871949 Msa1027450:intron 30.0%
! AAAATTGCCACTTATTAACC+TGG + chr7_1:59871996-59872015 Msa1027450:CDS 30.0%
AGGTTTCTTTACTGTAGTTT+GGG - chr7_1:59872254-59872273 None:intergenic 30.0%
AAGGTTTCTTTACTGTAGTT+TGG - chr7_1:59872255-59872274 None:intergenic 30.0%
AGCAAGGAACTAAAATATGT+CGG - chr7_1:59872304-59872323 None:intergenic 30.0%
ATTTAACAAGGAAGAACAGA+TGG + chr7_1:59872404-59872423 Msa1027450:CDS 30.0%
ACAAAGGAAGAAATTGAAAG+AGG + chr7_1:59872458-59872477 Msa1027450:CDS 30.0%
GTGATTGGAATTTGGGAAAA+TGG + chr7_1:59865384-59865403 Msa1027450:exon 35.0%
! GGAAAATGGGTTTGTTCTTT+GGG + chr7_1:59865398-59865417 Msa1027450:exon 35.0%
!!! TGTTCTTTGGGATTTTTCTG+GGG + chr7_1:59865410-59865429 Msa1027450:CDS 35.0%
!!! ATTTTTCTGGGGGTGTTATT+CGG + chr7_1:59865421-59865440 Msa1027450:CDS 35.0%
ATACCTTAGCAATTCTCTTG+CGG - chr7_1:59865492-59865511 None:intergenic 35.0%
! AGTGTTTGTTTGGTTCCAAA+TGG + chr7_1:59865632-59865651 Msa1027450:intron 35.0%
TGATTTCGACAAACACCATT+TGG - chr7_1:59865650-59865669 None:intergenic 35.0%
! GATACAAGAGTGTGTAATCT+AGG + chr7_1:59866030-59866049 Msa1027450:intron 35.0%
AATCATATAGGGCTGTGAAA+GGG + chr7_1:59866061-59866080 Msa1027450:intron 35.0%
TCGATGTCCTCTATATATAC+GGG + chr7_1:59866109-59866128 Msa1027450:intron 35.0%
AGAGAAAAGTTTCCAATACC+AGG - chr7_1:59866146-59866165 None:intergenic 35.0%
GAATTGACTAGCATTAATCG+AGG - chr7_1:59866398-59866417 None:intergenic 35.0%
CGATTAATGCTAGTCAATTC+AGG + chr7_1:59866398-59866417 Msa1027450:intron 35.0%
! GTGTAGTGGAAAAACAGAAT+AGG - chr7_1:59866455-59866474 None:intergenic 35.0%
CGAAGAAGACAAGAAAAACA+AGG + chr7_1:59866512-59866531 Msa1027450:intron 35.0%
CTTTAAGTCGTCTCTATTCA+GGG - chr7_1:59866746-59866765 None:intergenic 35.0%
TCTTTAAGTCGTCTCTATTC+AGG - chr7_1:59866747-59866766 None:intergenic 35.0%
GTGGTGAAAATTTACCTGAA+TGG + chr7_1:59866773-59866792 Msa1027450:CDS 35.0%
AATGATCCTATCATAGGCAT+TGG + chr7_1:59866875-59866894 Msa1027450:intron 35.0%
TCGTTCAAACTGAACAATTG+GGG - chr7_1:59867262-59867281 None:intergenic 35.0%
CTCGTTCAAACTGAACAATT+GGG - chr7_1:59867263-59867282 None:intergenic 35.0%
TCTCGTTCAAACTGAACAAT+TGG - chr7_1:59867264-59867283 None:intergenic 35.0%
CAAATCAAAACCACGAAAAC+TGG + chr7_1:59867364-59867383 Msa1027450:intron 35.0%
! TTATCAGAATCCAGTTTTCG+TGG - chr7_1:59867377-59867396 None:intergenic 35.0%
TTCAGCTACAATGATTGATC+TGG + chr7_1:59867631-59867650 Msa1027450:intron 35.0%
AAGAAATATGGATGCAATGG+AGG + chr7_1:59867700-59867719 Msa1027450:intron 35.0%
!! TGCACATAATTTCGAGTTTG+AGG + chr7_1:59867858-59867877 Msa1027450:intron 35.0%
AGTATTGCAACTTGTAACTG+AGG - chr7_1:59868010-59868029 None:intergenic 35.0%
TGGGATTGTAGATGCATTTA+TGG - chr7_1:59868038-59868057 None:intergenic 35.0%
AAATGCATCTACAATCCCAA+AGG + chr7_1:59868039-59868058 Msa1027450:intron 35.0%
AATGCATCTACAATCCCAAA+GGG + chr7_1:59868040-59868059 Msa1027450:intron 35.0%
TTTGTGACTTCGTTTATGCT+GGG - chr7_1:59868116-59868135 None:intergenic 35.0%
ACAATCATGTCAACTACGTT+AGG - chr7_1:59868157-59868176 None:intergenic 35.0%
GTATGATTGCGATTATGCTA+AGG + chr7_1:59868262-59868281 Msa1027450:intron 35.0%
!! CGCAAGAGGATTTTTGTTTA+AGG - chr7_1:59868393-59868412 None:intergenic 35.0%
GGTCTATACTCTTCTAATAG+CGG - chr7_1:59868570-59868589 None:intergenic 35.0%
AACTTCAACGAAGAAATTCC+AGG - chr7_1:59868594-59868613 None:intergenic 35.0%
AATGAAGAAAGGAATCTGTG+TGG - chr7_1:59868666-59868685 None:intergenic 35.0%
ACAGGAAAAGCAATGAAGAA+AGG - chr7_1:59868677-59868696 None:intergenic 35.0%
! CTTTTCCTGTTTGCACATTA+TGG + chr7_1:59868687-59868706 Msa1027450:intron 35.0%
GAATCTACCTAGTTGGAAAA+AGG + chr7_1:59868748-59868767 Msa1027450:intron 35.0%
AAAAAGGCTATGGTTGTTGT+TGG + chr7_1:59868764-59868783 Msa1027450:intron 35.0%
TACAAGAGACAAAAGGAGAA+AGG - chr7_1:59869023-59869042 None:intergenic 35.0%
ACAGAACAAGACCAAAGTTA+GGG - chr7_1:59869089-59869108 None:intergenic 35.0%
AACAGAACAAGACCAAAGTT+AGG - chr7_1:59869090-59869109 None:intergenic 35.0%
! GTCTTGTTCTGTTATACTTG+TGG + chr7_1:59869097-59869116 Msa1027450:intron 35.0%
TTATACTTGTGGCTTCTCTT+GGG + chr7_1:59869108-59869127 Msa1027450:intron 35.0%
CCAAAACTCTCCAATATCAT+TGG - chr7_1:59869177-59869196 None:intergenic 35.0%
! CCAATGATATTGGAGAGTTT+TGG + chr7_1:59869174-59869193 Msa1027450:intron 35.0%
AAAGTAGTTTCCACCATAAG+AGG - chr7_1:59869377-59869396 None:intergenic 35.0%
CCTTATTGAACAATACTGAC+AGG - chr7_1:59869684-59869703 None:intergenic 35.0%
CCTGTCAGTATTGTTCAATA+AGG + chr7_1:59869681-59869700 Msa1027450:intron 35.0%
!! CATAATTTGTTCATCCATGC+AGG + chr7_1:59869785-59869804 Msa1027450:intron 35.0%
CGTGTTCAGAGTCTTAAAAA+AGG + chr7_1:59869812-59869831 Msa1027450:CDS 35.0%
!! TAATGGACATTGATTTCCGT+TGG + chr7_1:59869843-59869862 Msa1027450:CDS 35.0%
!! AATGGACATTGATTTCCGTT+GGG + chr7_1:59869844-59869863 Msa1027450:CDS 35.0%
AACAGCAAATTGAGAAACTC+AGG - chr7_1:59870141-59870160 None:intergenic 35.0%
! TATTTGCGCAAATCCTTTTG+TGG + chr7_1:59870169-59870188 Msa1027450:intron 35.0%
! ATTTGCGCAAATCCTTTTGT+GGG + chr7_1:59870170-59870189 Msa1027450:intron 35.0%
!! ACTGAACATTGACTTGAAGT+TGG + chr7_1:59870223-59870242 Msa1027450:intron 35.0%
CAGAAGCAGATAGTTAAATG+TGG - chr7_1:59870394-59870413 None:intergenic 35.0%
CATTTAACTATCTGCTTCTG+TGG + chr7_1:59870394-59870413 Msa1027450:intron 35.0%
GTGTAATCAATTCTAGGCTT+TGG - chr7_1:59870649-59870668 None:intergenic 35.0%
TCAATCATATCTGAAAGTCC+AGG - chr7_1:59870706-59870725 None:intergenic 35.0%
ACAGTATCCTATGAAATGGT+GGG - chr7_1:59870810-59870829 None:intergenic 35.0%
GTTCACAGTATCCTATGAAA+TGG - chr7_1:59870814-59870833 None:intergenic 35.0%
!! ATACATTTTGATCGGCATTC+AGG - chr7_1:59870951-59870970 None:intergenic 35.0%
AATGCCGATCAAAATGTATC+TGG + chr7_1:59870952-59870971 Msa1027450:intron 35.0%
ATGCCGATCAAAATGTATCT+GGG + chr7_1:59870953-59870972 Msa1027450:intron 35.0%
!! AACCCCAGATACATTTTGAT+CGG - chr7_1:59870959-59870978 None:intergenic 35.0%
! AGTCACTTTAAGTATTCCCT+GGG - chr7_1:59871206-59871225 None:intergenic 35.0%
GAATATGCACAACTACGTAA+GGG - chr7_1:59871279-59871298 None:intergenic 35.0%
! CTTGAATCCAATTTGGAATG+AGG + chr7_1:59871339-59871358 Msa1027450:CDS 35.0%
TCGAATTCCTCATTCCAAAT+TGG - chr7_1:59871349-59871368 None:intergenic 35.0%
! TCTTGTGCTAGTTTATCCTA+CGG + chr7_1:59871439-59871458 Msa1027450:intron 35.0%
CAAAATGTAAGTAATGCCGT+AGG - chr7_1:59871458-59871477 None:intergenic 35.0%
ATCTTCCTCACTTATGCTTA+TGG + chr7_1:59871506-59871525 Msa1027450:intron 35.0%
TTCTTCCATAAGCATAAGTG+AGG - chr7_1:59871514-59871533 None:intergenic 35.0%
! TCTAGTCTGTGCAAATGTTT+TGG + chr7_1:59871601-59871620 Msa1027450:intron 35.0%
! CACGGCACATGTTAATATTT+TGG + chr7_1:59871829-59871848 Msa1027450:intron 35.0%
ATTGGGCAAGATAAACGATT+GGG + chr7_1:59871967-59871986 Msa1027450:CDS 35.0%
CTGAAAAGGAAATTGAACTG+AGG + chr7_1:59872028-59872047 Msa1027450:CDS 35.0%
GTAAAAGATAAGAAGGATCG+AGG + chr7_1:59872078-59872097 Msa1027450:CDS 35.0%
!! CTGTAGTTTGGGTTGTATAA+AGG - chr7_1:59872243-59872262 None:intergenic 35.0%
AGGAAGAAATTGAAAGAGGA+AGG + chr7_1:59872462-59872481 Msa1027450:CDS 35.0%
TTGAAAGAGGAAGGAGTTAT+TGG + chr7_1:59872471-59872490 Msa1027450:CDS 35.0%
! AGGAGTTATTGGAAGTACAA+TGG + chr7_1:59872482-59872501 Msa1027450:CDS 35.0%
ATCTACTCCTGTCTTTAATG+TGG + chr7_1:59872758-59872777 Msa1027450:CDS 35.0%
TCTTTAATGTGGAGGAAAGT+GGG + chr7_1:59872769-59872788 Msa1027450:CDS 35.0%
CGTAGCTGTGATTGGAATTT+GGG + chr7_1:59865377-59865396 Msa1027450:five_prime_UTR 40.0%
! GGGAAAATGGGTTTGTTCTT+TGG + chr7_1:59865397-59865416 Msa1027450:exon 40.0%
!!! GTTCTTTGGGATTTTTCTGG+GGG + chr7_1:59865411-59865430 Msa1027450:CDS 40.0%
GTGTAGCCTTTGTAGAATCA+TGG + chr7_1:59865690-59865709 Msa1027450:intron 40.0%
TAGCCTTTGTAGAATCATGG+TGG + chr7_1:59865693-59865712 Msa1027450:intron 40.0%
!! TGGTATTATGGTGGATTTGC+CGG - chr7_1:59865733-59865752 None:intergenic 40.0%
! TGTTATTGGTTGTTTGGAGC+AGG - chr7_1:59865976-59865995 None:intergenic 40.0%
GAATCATATAGGGCTGTGAA+AGG + chr7_1:59866060-59866079 Msa1027450:intron 40.0%
ATCATATAGGGCTGTGAAAG+GGG + chr7_1:59866062-59866081 Msa1027450:intron 40.0%
!! GGGGGTGCTTTATCATTATA+GGG + chr7_1:59866082-59866101 Msa1027450:intron 40.0%
CGATGTCCTCTATATATACG+GGG + chr7_1:59866110-59866129 Msa1027450:intron 40.0%
GTTTCACCCCGTATATATAG+AGG - chr7_1:59866119-59866138 None:intergenic 40.0%
AAAGTTTCCAATACCAGGTC+AGG - chr7_1:59866141-59866160 None:intergenic 40.0%
! CTCAGACTTTGTTGTCTACT+TGG + chr7_1:59866338-59866357 Msa1027450:intron 40.0%
TGCAACAAGTTTGAGTGTAG+TGG - chr7_1:59866469-59866488 None:intergenic 40.0%
ACAGGGAAAGATATCCATTC+AGG - chr7_1:59866790-59866809 None:intergenic 40.0%
ATCTTTCCCTGTATATGAGC+AGG + chr7_1:59866798-59866817 Msa1027450:CDS 40.0%
GTACGACAACAACAGATGAT+AGG - chr7_1:59866828-59866847 None:intergenic 40.0%
! GTTTTGCCAATGCCTATGAT+AGG - chr7_1:59866884-59866903 None:intergenic 40.0%
TCAGTTTGAACGAGAGAAAG+TGG + chr7_1:59867269-59867288 Msa1027450:intron 40.0%
TATGGGTAGACACTAAATCC+TGG + chr7_1:59867307-59867326 Msa1027450:intron 40.0%
TGGCAATCAATTACGAATCC+AGG - chr7_1:59867328-59867347 None:intergenic 40.0%
CTGTACTTGAAGCAATGCTT+TGG + chr7_1:59867606-59867625 Msa1027450:intron 40.0%
ATCCAAGAACCAGATCATTG+TGG - chr7_1:59867657-59867676 None:intergenic 40.0%
ATCACCACGAGACTAGATTA+GGG + chr7_1:59867675-59867694 Msa1027450:intron 40.0%
! TTTTCCCTAATCTAGTCTCG+TGG - chr7_1:59867682-59867701 None:intergenic 40.0%
AAATATGGATGCAATGGAGG+AGG + chr7_1:59867703-59867722 Msa1027450:intron 40.0%
GAGGAGGAATTGCAATACAT+GGG + chr7_1:59867719-59867738 Msa1027450:intron 40.0%
ATGTGCATCTTAGGCTCTTA+TGG - chr7_1:59867919-59867938 None:intergenic 40.0%
ATTGACCTGCTTAGTACATG+GGG - chr7_1:59868066-59868085 None:intergenic 40.0%
CATTGACCTGCTTAGTACAT+GGG - chr7_1:59868067-59868086 None:intergenic 40.0%
ACTTCGTTTATGCTGGGAAT+GGG - chr7_1:59868110-59868129 None:intergenic 40.0%
GTTTGTGACTTCGTTTATGC+TGG - chr7_1:59868117-59868136 None:intergenic 40.0%
TCGCTACATGTGCATCAAAA+GGG - chr7_1:59868204-59868223 None:intergenic 40.0%
ATCGCTACATGTGCATCAAA+AGG - chr7_1:59868205-59868224 None:intergenic 40.0%
TGATTGCGATTATGCTAAGG+AGG + chr7_1:59868265-59868284 Msa1027450:intron 40.0%
TCCAGGAGACCTTTAAACTT+TGG + chr7_1:59868420-59868439 Msa1027450:intron 40.0%
! TTCCTAATCTTCCTTTGGGA+AGG + chr7_1:59868449-59868468 Msa1027450:intron 40.0%
! TCCTAATCTTCCTTTGGGAA+GGG + chr7_1:59868450-59868469 Msa1027450:intron 40.0%
AGTATGAATACCCTTCCCAA+AGG - chr7_1:59868463-59868482 None:intergenic 40.0%
!!! GCTTTTTTAGGCAGCAACTA+TGG + chr7_1:59868524-59868543 Msa1027450:intron 40.0%
! TTAGAAGAGTATAGACCTCC+TGG + chr7_1:59868573-59868592 Msa1027450:CDS 40.0%
TTCAACGAAGAAATTCCAGG+AGG - chr7_1:59868591-59868610 None:intergenic 40.0%
ACTGTCGCTCCAAAAATTGA+AGG + chr7_1:59868633-59868652 Msa1027450:CDS 40.0%
!! GGACTGGTACCTTCAATTTT+TGG - chr7_1:59868645-59868664 None:intergenic 40.0%
CAACACCATAATGTGCAAAC+AGG - chr7_1:59868695-59868714 None:intergenic 40.0%
ACCTAGTTGGAAAAAGGCTA+TGG + chr7_1:59868754-59868773 Msa1027450:intron 40.0%
! ACCATAGCCTTTTTCCAACT+AGG - chr7_1:59868758-59868777 None:intergenic 40.0%
CAGCATTCGTAAATTCAGCA+GGG - chr7_1:59868803-59868822 None:intergenic 40.0%
ACAGCATTCGTAAATTCAGC+AGG - chr7_1:59868804-59868823 None:intergenic 40.0%
! GTAACTTAATTTGGTTGGCG+AGG + chr7_1:59869040-59869059 Msa1027450:intron 40.0%
GTTATACTTGTGGCTTCTCT+TGG + chr7_1:59869107-59869126 Msa1027450:intron 40.0%
TAAGAGGACATAACAGTCGA+TGG - chr7_1:59869361-59869380 None:intergenic 40.0%
TCGACTGTTATGTCCTCTTA+TGG + chr7_1:59869361-59869380 Msa1027450:intron 40.0%
ACTGTTATGTCCTCTTATGG+TGG + chr7_1:59869364-59869383 Msa1027450:intron 40.0%
!! ATGGACATTGATTTCCGTTG+GGG + chr7_1:59869845-59869864 Msa1027450:CDS 40.0%
TGTTGCGTCAATTCCTATTC+AGG + chr7_1:59869904-59869923 Msa1027450:CDS 40.0%
CAGCTTAGTCTAACCTGAAT+AGG - chr7_1:59869920-59869939 None:intergenic 40.0%
! TTGTTTCTCGCTTCAGTTGA+AGG + chr7_1:59869994-59870013 Msa1027450:intron 40.0%
! CTGCGAGTTGGAATATAACA+CGG - chr7_1:59870042-59870061 None:intergenic 40.0%
ACAACAACAGCAGAAATGCA+GGG - chr7_1:59870073-59870092 None:intergenic 40.0%
AACAACAACAGCAGAAATGC+AGG - chr7_1:59870074-59870093 None:intergenic 40.0%
AAAGGTTACCTCAGCAAGTA+GGG - chr7_1:59870098-59870117 None:intergenic 40.0%
GAACACGAGTTCCATATGAA+GGG - chr7_1:59870370-59870389 None:intergenic 40.0%
TGAACACGAGTTCCATATGA+AGG - chr7_1:59870371-59870390 None:intergenic 40.0%
TTGTTAGGGCCAACACTAAT+TGG + chr7_1:59870442-59870461 Msa1027450:intron 40.0%
TGTTAGGGCCAACACTAATT+GGG + chr7_1:59870443-59870462 Msa1027450:intron 40.0%
!! ATGGTGGGTAAAATACAGTG+TGG - chr7_1:59870795-59870814 None:intergenic 40.0%
CACAGTATCCTATGAAATGG+TGG - chr7_1:59870811-59870830 None:intergenic 40.0%
TTGTTACCGATATGCTCCAA+TGG + chr7_1:59870838-59870857 Msa1027450:CDS 40.0%
TGCCGATCAAAATGTATCTG+GGG + chr7_1:59870954-59870973 Msa1027450:intron 40.0%
! CTTTGTCTTTTGCAGTGATC+TGG + chr7_1:59871171-59871190 Msa1027450:intron 40.0%
! GTCACTTTAAGTATTCCCTG+GGG - chr7_1:59871205-59871224 None:intergenic 40.0%
! CAGTCACTTTAAGTATTCCC+TGG - chr7_1:59871207-59871226 None:intergenic 40.0%
CGAATATGCACAACTACGTA+AGG - chr7_1:59871280-59871299 None:intergenic 40.0%
CATTGGGCAAGATAAACGAT+TGG + chr7_1:59871966-59871985 Msa1027450:CDS 40.0%
TCTGCTTCCAGGTTAATAAG+TGG - chr7_1:59872006-59872025 None:intergenic 40.0%
TCGAGGAACCTTGAGAATAA+AGG + chr7_1:59872095-59872114 Msa1027450:CDS 40.0%
TACTCCTGTCTTTAATGTGG+AGG + chr7_1:59872761-59872780 Msa1027450:CDS 40.0%
CTTTCCTCCACATTAAAGAC+AGG - chr7_1:59872768-59872787 None:intergenic 40.0%
GTCTTTAATGTGGAGGAAAG+TGG + chr7_1:59872768-59872787 Msa1027450:CDS 40.0%
CTTTAATGTGGAGGAAAGTG+GGG + chr7_1:59872770-59872789 Msa1027450:CDS 40.0%
TTTAATGTGGAGGAAAGTGG+GGG + chr7_1:59872771-59872790 Msa1027450:CDS 40.0%
CCAGGAAGAAAAAATTACCG+TGG - chr7_1:59872807-59872826 None:intergenic 40.0%
!!! CCACGGTAATTTTTTCTTCC+TGG + chr7_1:59872804-59872823 Msa1027450:exon 40.0%
ATTACTATCTTGACGTGTCC+AGG - chr7_1:59872825-59872844 None:intergenic 40.0%
GAATTTGGCGTAGCTGTGAT+TGG + chr7_1:59865369-59865388 Msa1027450:five_prime_UTR 45.0%
GCGTAGCTGTGATTGGAATT+TGG + chr7_1:59865376-59865395 Msa1027450:five_prime_UTR 45.0%
! GTTATTCGGCGTAGCATTGA+TGG + chr7_1:59865435-59865454 Msa1027450:CDS 45.0%
AAGCCGCAAGAGAATTGCTA+AGG + chr7_1:59865486-59865505 Msa1027450:CDS 45.0%
GAGCCACCATGATTCTACAA+AGG - chr7_1:59865699-59865718 None:intergenic 45.0%
GCAGGTAGAATTGATGTTGG+AGG - chr7_1:59865958-59865977 None:intergenic 45.0%
GGAGCAGGTAGAATTGATGT+TGG - chr7_1:59865961-59865980 None:intergenic 45.0%
TCATATAGGGCTGTGAAAGG+GGG + chr7_1:59866063-59866082 Msa1027450:intron 45.0%
!! GGGGGGTGCTTTATCATTAT+AGG + chr7_1:59866081-59866100 Msa1027450:intron 45.0%
GCAGTTGACGTTAAACTCCT+TGG + chr7_1:59866718-59866737 Msa1027450:CDS 45.0%
TTACTCACATCCGCCACAAA+TGG - chr7_1:59867097-59867116 None:intergenic 45.0%
TTGATCTGGCCACAATGATC+TGG + chr7_1:59867645-59867664 Msa1027450:intron 45.0%
GATCACCACGAGACTAGATT+AGG + chr7_1:59867674-59867693 Msa1027450:intron 45.0%
GGAGGAGGAATTGCAATACA+TGG + chr7_1:59867718-59867737 Msa1027450:intron 45.0%
CCATTGACCTGCTTAGTACA+TGG - chr7_1:59868068-59868087 None:intergenic 45.0%
CCATGTACTAAGCAGGTCAA+TGG + chr7_1:59868065-59868084 Msa1027450:intron 45.0%
GACTTCGTTTATGCTGGGAA+TGG - chr7_1:59868111-59868130 None:intergenic 45.0%
GCCAAAGTTTAAAGGTCTCC+TGG - chr7_1:59868424-59868443 None:intergenic 45.0%
ACCCTTCCCAAAGGAAGATT+AGG - chr7_1:59868454-59868473 None:intergenic 45.0%
AAGTTCAGTAAGCTGTCCCT+TGG + chr7_1:59868609-59868628 Msa1027450:CDS 45.0%
!!! TTTTGGAGCGACAGTTCCAA+GGG - chr7_1:59868628-59868647 None:intergenic 45.0%
!!! TTTTTGGAGCGACAGTTCCA+AGG - chr7_1:59868629-59868648 None:intergenic 45.0%
AGAAAGGAATCTGTGTGGAC+TGG - chr7_1:59868661-59868680 None:intergenic 45.0%
ATAATATACACACGTGCGCG+CGG - chr7_1:59868724-59868743 None:intergenic 45.0%
TCTCTTGGGTACTCTCTCAA+TGG + chr7_1:59869122-59869141 Msa1027450:intron 45.0%
CTCTCAATGGTTGCTTGAAG+TGG + chr7_1:59869135-59869154 Msa1027450:intron 45.0%
AGGACATAACAGTCGATGGT+CGG - chr7_1:59869357-59869376 None:intergenic 45.0%
TATTAGGATCACCACCCCAA+CGG - chr7_1:59869862-59869881 None:intergenic 45.0%
! CACGGATAATGGTGAAAACC+TGG - chr7_1:59870024-59870043 None:intergenic 45.0%
CAACAACAGCAGAAATGCAG+GGG - chr7_1:59870072-59870091 None:intergenic 45.0%
CAAAGGTTACCTCAGCAAGT+AGG - chr7_1:59870099-59870118 None:intergenic 45.0%
! ACTTGCTGAGGTAACCTTTG+AGG + chr7_1:59870099-59870118 Msa1027450:intron 45.0%
CTTGCTGAGGTAACCTTTGA+GGG + chr7_1:59870100-59870119 Msa1027450:intron 45.0%
! GCAAATCCTTTTGTGGGAAC+CGG + chr7_1:59870176-59870195 Msa1027450:intron 45.0%
! CAAATCCTTTTGTGGGAACC+GGG + chr7_1:59870177-59870196 Msa1027450:intron 45.0%
! AAATCCTTTTGTGGGAACCG+GGG + chr7_1:59870178-59870197 Msa1027450:intron 45.0%
! GATTACACTCTGAAGGCAGT+TGG + chr7_1:59870661-59870680 Msa1027450:CDS 45.0%
ATGAGGCCATTGGAGCATAT+CGG - chr7_1:59870847-59870866 None:intergenic 45.0%
ATATGCTCCAATGGCCTCAT+CGG + chr7_1:59870847-59870866 Msa1027450:CDS 45.0%
AGTGGAACAACAATCCGATG+AGG - chr7_1:59870864-59870883 None:intergenic 45.0%
! CATCGGATTGTTGTTCCACT+TGG + chr7_1:59870864-59870883 Msa1027450:CDS 45.0%
TCACACTACCTAGTATCCAC+AGG - chr7_1:59870897-59870916 None:intergenic 45.0%
CGACTTGATTGCAGAAGACA+AGG + chr7_1:59871366-59871385 Msa1027450:CDS 45.0%
GGAGAAGATAAGCGCTTCTT+TGG - chr7_1:59871782-59871801 None:intergenic 45.0%
! CCTTTTCAGTTTCTGCTTCC+AGG - chr7_1:59872017-59872036 None:intergenic 45.0%
CCTGGAAGCAGAAACTGAAA+AGG + chr7_1:59872014-59872033 Msa1027450:CDS 45.0%
AGCAAGGCAGGAAAGTTCAT+GGG + chr7_1:59872687-59872706 Msa1027450:CDS 45.0%
!! CGTAGCATTGATGGCTGGAT+GGG + chr7_1:59865444-59865463 Msa1027450:CDS 50.0%
CATATAGGGCTGTGAAAGGG+GGG + chr7_1:59866064-59866083 Msa1027450:intron 50.0%
GGTGAAACCTGACCTGGTAT+TGG + chr7_1:59866131-59866150 Msa1027450:intron 50.0%
CGTCTCTATTCAGGGATCCA+AGG - chr7_1:59866738-59866757 None:intergenic 50.0%
GGCACACCTGCTCATATACA+GGG - chr7_1:59866807-59866826 None:intergenic 50.0%
AGGCACACCTGCTCATATAC+AGG - chr7_1:59866808-59866827 None:intergenic 50.0%
ACAAGCAGCTGTCCAAGTTG+TGG + chr7_1:59867071-59867090 Msa1027450:CDS 50.0%
GTCCAAGTTGTGGCCATTTG+TGG + chr7_1:59867081-59867100 Msa1027450:CDS 50.0%
CAAGTTGTGGCCATTTGTGG+CGG + chr7_1:59867084-59867103 Msa1027450:CDS 50.0%
!! GGCCACAATGATCTGGTTCT+TGG + chr7_1:59867652-59867671 Msa1027450:intron 50.0%
CTTAGTACATGGGGCCCTTT+GGG - chr7_1:59868057-59868076 None:intergenic 50.0%
CATAACAGTCGATGGTCGGA+AGG - chr7_1:59869353-59869372 None:intergenic 50.0%
TCTGAACACGAATGCCTGCA+TGG - chr7_1:59869802-59869821 None:intergenic 50.0%
!! GACATTGATTTCCGTTGGGG+TGG + chr7_1:59869848-59869867 Msa1027450:CDS 50.0%
GCTTCAGTTGAAGGATCTCC+AGG + chr7_1:59870003-59870022 Msa1027450:intron 50.0%
! TGTTGTTGCCCTACTTGCTG+AGG + chr7_1:59870087-59870106 Msa1027450:CDS 50.0%
! CTGAGGTAACCTTTGAGGGT+GGG + chr7_1:59870104-59870123 Msa1027450:intron 50.0%
! TGAGGTAACCTTTGAGGGTG+GGG + chr7_1:59870105-59870124 Msa1027450:intron 50.0%
! GGGCATTGCCCAATTAGTGT+TGG - chr7_1:59870454-59870473 None:intergenic 50.0%
! TACACTCTGAAGGCAGTTGG+TGG + chr7_1:59870664-59870683 Msa1027450:CDS 50.0%
!! GGCAGTTGGTGGAAGTTTGA+CGG + chr7_1:59870675-59870694 Msa1027450:CDS 50.0%
CAACAATCCGATGAGGCCAT+TGG - chr7_1:59870857-59870876 None:intergenic 50.0%
! CGGATTGTTGTTCCACTTGG+TGG + chr7_1:59870867-59870886 Msa1027450:CDS 50.0%
GTGGTACTCCTGTGGATACT+AGG + chr7_1:59870886-59870905 Msa1027450:CDS 50.0%
! TGATCTGGAGCTTAAACCCC+AGG + chr7_1:59871186-59871205 Msa1027450:CDS 50.0%
! GATCTGGAGCTTAAACCCCA+GGG + chr7_1:59871187-59871206 Msa1027450:CDS 50.0%
AACCTCGACAGTGAGTGACT+GGG - chr7_1:59871395-59871414 None:intergenic 50.0%
AAACCTCGACAGTGAGTGAC+TGG - chr7_1:59871396-59871415 None:intergenic 50.0%
AGTACAATGGACGCGCTAGA+CGG + chr7_1:59872495-59872514 Msa1027450:CDS 50.0%
! GCAGCATCAGTAGTTGGTTC+TGG + chr7_1:59872519-59872538 Msa1027450:CDS 50.0%
!! TCAGTAGTTGGTTCTGGTGC+TGG + chr7_1:59872525-59872544 Msa1027450:CDS 50.0%
GGACTCGTTGGAACTGGAAT+CGG + chr7_1:59872546-59872565 Msa1027450:CDS 50.0%
! GGAATGGTGGGAAGTGGAAT+TGG + chr7_1:59872579-59872598 Msa1027450:CDS 50.0%
!! AATTGGTGCTGGAGCTGGAA+TGG + chr7_1:59872596-59872615 Msa1027450:CDS 50.0%
! GGAATGGTGGGAAGTGGATT+CGG + chr7_1:59872612-59872631 Msa1027450:CDS 50.0%
GAGCTGGAATTGTTGGCAGT+GGG + chr7_1:59872640-59872659 Msa1027450:CDS 50.0%
GAGCAAGGCAGGAAAGTTCA+TGG + chr7_1:59872686-59872705 Msa1027450:CDS 50.0%
TTCATGGGCAGGACAATCAC+AGG + chr7_1:59872702-59872721 Msa1027450:CDS 50.0%
TCATGGGCAGGACAATCACA+GGG + chr7_1:59872703-59872722 Msa1027450:CDS 50.0%
CAGGGCAAACTGTATCGAGA+AGG + chr7_1:59872721-59872740 Msa1027450:CDS 50.0%
!! TTCGGCGTAGCATTGATGGC+TGG + chr7_1:59865439-59865458 Msa1027450:CDS 55.0%
!! GCGTAGCATTGATGGCTGGA+TGG + chr7_1:59865443-59865462 Msa1027450:CDS 55.0%
GGTGGCTCACTCTGTGATTC+CGG + chr7_1:59865711-59865730 Msa1027450:intron 55.0%
ATACGGGGTGAAACCTGACC+TGG + chr7_1:59866125-59866144 Msa1027450:intron 55.0%
TGGTAGGCTTGTGTGAGCTG+TGG + chr7_1:59866607-59866626 Msa1027450:intron 55.0%
CGCCACAAATGGCCACAACT+TGG - chr7_1:59867086-59867105 None:intergenic 55.0%
GCTTAGTACATGGGGCCCTT+TGG - chr7_1:59868058-59868077 None:intergenic 55.0%
AAGGGCCCCATGTACTAAGC+AGG + chr7_1:59868058-59868077 Msa1027450:intron 55.0%
AGGGGATCTCTTCTGCGAGT+TGG - chr7_1:59870054-59870073 None:intergenic 55.0%
! GCTGAGGTAACCTTTGAGGG+TGG + chr7_1:59870103-59870122 Msa1027450:intron 55.0%
! GAGGTAACCTTTGAGGGTGG+GGG + chr7_1:59870106-59870125 Msa1027450:intron 55.0%
! AGGTAACCTTTGAGGGTGGG+GGG + chr7_1:59870107-59870126 Msa1027450:intron 55.0%
TTCACCCCGGTTCCCACAAA+AGG - chr7_1:59870185-59870204 None:intergenic 55.0%
GGAAGTTTGACGGCACTTCC+TGG + chr7_1:59870685-59870704 Msa1027450:CDS 55.0%
! TCCACTTGGTGGTACTCCTG+TGG + chr7_1:59870878-59870897 Msa1027450:CDS 55.0%
!! TCCACAGGAGTACCACCAAG+TGG - chr7_1:59870882-59870901 None:intergenic 55.0%
GACGGAGCAGCATCAGTAGT+TGG + chr7_1:59872513-59872532 Msa1027450:CDS 55.0%
GTGGGAAGTGGAATTGGTGC+TGG + chr7_1:59872585-59872604 Msa1027450:CDS 55.0%
!! AGTGGAATTGGTGCTGGAGC+TGG + chr7_1:59872591-59872610 Msa1027450:CDS 55.0%
! GGTGCTGGAGCTGGAATTGT+TGG + chr7_1:59872633-59872652 Msa1027450:CDS 55.0%
GGAGCTGGAATTGTTGGCAG+TGG + chr7_1:59872639-59872658 Msa1027450:CDS 55.0%
! GGAATTGTTGGCAGTGGGCT+TGG + chr7_1:59872645-59872664 Msa1027450:CDS 55.0%
CTTGCTCAGTCCACTGCCAA+CGG - chr7_1:59872673-59872692 None:intergenic 55.0%
AGGCAGGAAAGTTCATGGGC+AGG + chr7_1:59872691-59872710 Msa1027450:CDS 55.0%
!! GTATCGAGAAGGAGTGCCAG+CGG + chr7_1:59872732-59872751 Msa1027450:CDS 55.0%
GACAGGAGTAGATGAACCGC+TGG - chr7_1:59872751-59872770 None:intergenic 55.0%
AATGTGGAGGAAAGTGGGGG+TGG + chr7_1:59872774-59872793 Msa1027450:CDS 55.0%
TCCTCTTGCGCTCAAGCTCC+AGG + chr7_1:59868403-59868422 Msa1027450:intron 60.0%
TCCTGGAGCTTGAGCGCAAG+AGG - chr7_1:59868407-59868426 None:intergenic 60.0%
GATCAACCCCCCACCCTCAA+AGG - chr7_1:59870116-59870135 None:intergenic 60.0%
GACCCAGTCACTCACTGTCG+AGG + chr7_1:59871390-59871409 Msa1027450:CDS 60.0%
! GGTTCTGGTGCTGGACTCGT+TGG + chr7_1:59872534-59872553 Msa1027450:CDS 60.0%
! GGTGCTGGACTCGTTGGAAC+TGG + chr7_1:59872540-59872559 Msa1027450:CDS 60.0%
GTTGGAACTGGAATCGGCGC+TGG + chr7_1:59872552-59872571 Msa1027450:CDS 60.0%
! AATCGGCGCTGGAGCTGGAA+TGG + chr7_1:59872563-59872582 Msa1027450:CDS 60.0%
! GGAGCTGGAATGGTGGGAAG+TGG + chr7_1:59872573-59872592 Msa1027450:CDS 60.0%
! TGGTGCTGGAGCTGGAATGG+TGG + chr7_1:59872599-59872618 Msa1027450:CDS 60.0%
! GGTGCTGGAGCTGGAATGGT+GGG + chr7_1:59872600-59872619 Msa1027450:CDS 60.0%
! GGAGCTGGAATGGTGGGAAG+TGG + chr7_1:59872573-59872592 Msa1027450:CDS 60.0%
!! GTGGGAAGTGGATTCGGTGC+TGG + chr7_1:59872618-59872637 Msa1027450:CDS 60.0%
!! AGTGGATTCGGTGCTGGAGC+TGG + chr7_1:59872624-59872643 Msa1027450:CDS 60.0%
!! CGTTGGCAGTGGACTGAGCA+AGG + chr7_1:59872671-59872690 Msa1027450:CDS 60.0%
! ACTGGAATCGGCGCTGGAGC+TGG + chr7_1:59872558-59872577 Msa1027450:CDS 65.0%
! GGCGCTGGAGCTGGAATGGT+GGG + chr7_1:59872567-59872586 Msa1027450:CDS 65.0%
!! GGCAGTGGACTGAGCAAGGC+AGG + chr7_1:59872675-59872694 Msa1027450:CDS 65.0%
! CGGCGCTGGAGCTGGAATGG+TGG + chr7_1:59872566-59872585 Msa1027450:CDS 70.0%
!! GGCAGTGGGCTTGGTGCCGT+TGG + chr7_1:59872654-59872673 Msa1027450:CDS 70.0%
!! GGGCTTGGTGCCGTTGGCAG+TGG + chr7_1:59872660-59872679 Msa1027450:CDS 70.0%
GTGGGGGTGGCGCAAAGCCA+CGG + chr7_1:59872787-59872806 Msa1027450:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 59865262 59872990 59865262 ID=Msa1027450;Name=Msa1027450
chr7_1 mRNA 59865262 59872990 59865262 ID=Msa1027450-mRNA-1;Parent=Msa1027450;Name=Msa1027450-mRNA-1;_AED=0.05;_eAED=0.05;_QI=141|1|1|1|1|1|11|178|525
chr7_1 exon 59865262 59865507 59865262 ID=Msa1027450-mRNA-1:exon:12240;Parent=Msa1027450-mRNA-1
chr7_1 exon 59866718 59866819 59866718 ID=Msa1027450-mRNA-1:exon:12241;Parent=Msa1027450-mRNA-1
chr7_1 exon 59867058 59867108 59867058 ID=Msa1027450-mRNA-1:exon:12242;Parent=Msa1027450-mRNA-1
chr7_1 exon 59868534 59868654 59868534 ID=Msa1027450-mRNA-1:exon:12243;Parent=Msa1027450-mRNA-1
chr7_1 exon 59869807 59869925 59869807 ID=Msa1027450-mRNA-1:exon:12244;Parent=Msa1027450-mRNA-1
chr7_1 exon 59870010 59870108 59870010 ID=Msa1027450-mRNA-1:exon:12245;Parent=Msa1027450-mRNA-1
chr7_1 exon 59870646 59870726 59870646 ID=Msa1027450-mRNA-1:exon:12246;Parent=Msa1027450-mRNA-1
chr7_1 exon 59870822 59870907 59870822 ID=Msa1027450-mRNA-1:exon:12247;Parent=Msa1027450-mRNA-1
chr7_1 exon 59871186 59871411 59871186 ID=Msa1027450-mRNA-1:exon:12248;Parent=Msa1027450-mRNA-1
chr7_1 exon 59871952 59872116 59871952 ID=Msa1027450-mRNA-1:exon:12249;Parent=Msa1027450-mRNA-1
chr7_1 exon 59872390 59872990 59872390 ID=Msa1027450-mRNA-1:exon:12250;Parent=Msa1027450-mRNA-1
chr7_1 five_prime_UTR 59865262 59865402 59865262 ID=Msa1027450-mRNA-1:five_prime_utr;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59865403 59865507 59865403 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59866718 59866819 59866718 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59867058 59867108 59867058 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59868534 59868654 59868534 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59869807 59869925 59869807 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59870010 59870108 59870010 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59870646 59870726 59870646 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59870822 59870907 59870822 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59871186 59871411 59871186 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59871952 59872116 59871952 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 CDS 59872390 59872812 59872390 ID=Msa1027450-mRNA-1:cds;Parent=Msa1027450-mRNA-1
chr7_1 three_prime_UTR 59872813 59872990 59872813 ID=Msa1027450-mRNA-1:three_prime_utr;Parent=Msa1027450-mRNA-1
Gene Sequence

>Msa1027450

ATGGGTTTGTTCTTTGGGATTTTTCTGGGGGTGTTATTCGGCGTAGCATTGATGGCTGGATGGGAGAGAATGATGAGATACAGAAGCCGCAAGAGAATTGCTAAGGCAGTTGACGTTAAACTCCTTGGATCCCTGAATAGAGACGACTTAAAGAAAATTTGTGGTGAAAATTTACCTGAATGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCAGCTGTCCAAGTTGTGGCCATTTGTGGCGGATGCAGCAACTATGGTGATAAGAGAATCTGTTGAACCGCTATTAGAAGAGTATAGACCTCCTGGAATTTCTTCGTTGAAGTTCAGTAAGCTGTCCCTTGGAACTGTCGCTCCAAAAATTGAAGGCATTCGTGTTCAGAGTCTTAAAAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGATCCTAATATTGTTTTGGGTGTTGAAGCACTTGTTGCGTCAATTCCTATTCAGTTGAAGGATCTCCAGGTTTTCACCATTATCCGTGTTATATTCCAACTCGCAGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCAGTTGGTGGAAGTTTGACGGCACTTCCTGGACTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACCGATATGCTCCAATGGCCTCATCGGATTGTTGTTCCACTTGGTGGTACTCCTGTGGATACTAGTGATCTGGAGCTTAAACCCCAGGGAATACTTAAAGTGACTGTAATGAAAGCAAATGATCTAAAGAATATGGAAATGATTGGGAAGTCTGACCCTTACGTAGTTGTGCATATTCGACCACTCTTTAAAGTCAAAACAAAGGTTATTGATAACAACTTGAATCCAATTTGGAATGAGGAATTCGACTTGATTGCAGAAGACAAGGAGACCCAGTCACTCACTGTCGAGGTTTTTGATAAAGACATTGGGCAAGATAAACGATTGGGAGTAGCAAAATTGCCACTTATTAACCTGGAAGCAGAAACTGAAAAGGAAATTGAACTGAGGCTTCTGTCATCGCTTGATACATTGAAAGTAAAAGATAAGAAGGATCGAGGAACCTTGAGAATAAAGTATTTCTATCATGAATTTAACAAGGAAGAACAGATGGCTGCACTAGAAGCAGAAAAAATGACACTAGAACAAAGGAAGAAATTGAAAGAGGAAGGAGTTATTGGAAGTACAATGGACGCGCTAGACGGAGCAGCATCAGTAGTTGGTTCTGGTGCTGGACTCGTTGGAACTGGAATCGGCGCTGGAGCTGGAATGGTGGGAAGTGGAATTGGTGCTGGAGCTGGAATGGTGGGAAGTGGATTCGGTGCTGGAGCTGGAATTGTTGGCAGTGGGCTTGGTGCCGTTGGCAGTGGACTGAGCAAGGCAGGAAAGTTCATGGGCAGGACAATCACAGGGCAAACTGTATCGAGAAGGAGTGCCAGCGGTTCATCTACTCCTGTCTTTAATGTGGAGGAAAGTGGGGGTGGCGCAAAGCCACGGTAA

Protein sequence

>Msa1027450

MGLFFGIFLGVLFGVALMAGWERMMRYRSRKRIAKAVDVKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKQLSKLWPFVADAATMVIRESVEPLLEEYRPPGISSLKFSKLSLGTVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPNIVLGVEALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGLSDMIDDTVNSIVTDMLQWPHRIVVPLGGTPVDTSDLELKPQGILKVTVMKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPIWNEEFDLIAEDKETQSLTVEVFDKDIGQDKRLGVAKLPLINLEAETEKEIELRLLSSLDTLKVKDKKDRGTLRIKYFYHEFNKEEQMAALEAEKMTLEQRKKLKEEGVIGSTMDALDGAASVVGSGAGLVGTGIGAGAGMVGSGIGAGAGMVGSGFGAGAGIVGSGLGAVGSGLSKAGKFMGRTITGQTVSRRSASGSSTPVFNVEESGGGAKPR*