AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1028130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1028130 MtrunA17_Chr7g0247821 94.737 912 48 0 1 912 1 912 0.0 1745
Msa1028130 MtrunA17_Chr8g0348871 53.746 921 349 13 1 909 1 856 0.0 872
Msa1028130 MtrunA17_Chr8g0386941 29.697 165 100 4 753 912 419 572 1.73e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1028130 AT4G00440.2 33.441 927 443 33 1 888 1 792 3.56e-103 340
Msa1028130 AT4G00440.1 33.441 927 443 33 1 888 1 792 3.84e-103 340
Msa1028130 AT4G00440.5 33.441 927 443 33 1 888 1 792 3.84e-103 340
Msa1028130 AT4G00440.4 33.441 927 443 33 1 888 1 792 4.13e-103 340
Msa1028130 AT4G00440.3 33.441 927 443 33 1 888 1 792 4.13e-103 340
Msa1028130 AT3G61380.1 40.458 262 146 3 652 904 440 700 1.19e-48 185
Msa1028130 AT3G61380.1 28.016 257 149 8 296 550 160 382 1.26e-16 85.1
Msa1028130 AT3G61380.2 40.458 262 146 3 652 904 440 700 1.19e-48 185
Msa1028130 AT3G61380.2 28.016 257 149 8 296 550 160 382 1.26e-16 85.1
Msa1028130 AT3G61380.3 40.458 262 146 3 652 904 440 700 1.19e-48 185
Msa1028130 AT3G61380.3 28.016 257 149 8 296 550 160 382 1.26e-16 85.1
Msa1028130 AT1G01695.1 36.986 146 87 2 749 893 273 414 2.36e-24 107
Msa1028130 AT2G45900.3 28.241 216 129 8 314 523 192 387 1.67e-12 72.0
Msa1028130 AT2G45900.1 28.241 216 129 8 314 523 192 387 1.67e-12 72.0
Msa1028130 AT2G45900.2 28.241 216 129 8 314 523 192 387 1.67e-12 72.0

Find 230 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAATCAAGGTACCGATTT+AGG 0.109121 7_1:-60736774 Msa1028130:CDS
TTCACGTTCTGAATTAAATT+TGG 0.154699 7_1:+60735750 None:intergenic
TATTTCAGTAAATGTGAATT+TGG 0.182982 7_1:+60736327 None:intergenic
TGGGAGTCCTGGAGGGAATT+TGG 0.184640 7_1:-60735563 Msa1028130:CDS
TTCAGAATGACAATTCTATT+TGG 0.201578 7_1:+60736105 None:intergenic
GTTTGAGGCATTGAGTAATT+TGG 0.206953 7_1:-60737091 Msa1028130:CDS
AAAGCAATGATTAAACTTAA+TGG 0.208027 7_1:+60738432 None:intergenic
ACTCAACTTTCTTCAAATAT+TGG 0.218224 7_1:+60738399 None:intergenic
CACAAAAGATATAAATGTTT+TGG 0.224731 7_1:-60735138 Msa1028130:CDS
TTTCCCTTACAGAGATAAAA+AGG 0.239566 7_1:-60735978 Msa1028130:CDS
CCTATGTTTGATGTTGTAAA+AGG 0.247879 7_1:-60735799 Msa1028130:CDS
AGATTTGTTGGCATTACTTT+GGG 0.250882 7_1:-60734230 Msa1028130:CDS
TGATACTTGGGGAATGAAAT+TGG 0.251527 7_1:-60738193 Msa1028130:five_prime_UTR
GTGAAGAAACGGTCTTTATT+AGG 0.257115 7_1:+60735838 None:intergenic
CTTCAGAACTGACATTCTTT+TGG 0.263807 7_1:+60736508 None:intergenic
TTTGAAATTTGAGTTAATTA+AGG 0.266378 7_1:-60738307 Msa1028130:five_prime_UTR
CAATGCCTCAAACTTGTTCT+TGG 0.274448 7_1:+60737101 None:intergenic
TTTGCCATATTGAGATGATT+TGG 0.282849 7_1:+60737602 None:intergenic
CACGTTCAGCATTGCGTTCG+TGG 0.296235 7_1:+60735917 None:intergenic
CCTTTGTTCAAATGAACTAA+TGG 0.299139 7_1:-60736406 Msa1028130:CDS
TATTGATTTGGACAAGATAA+TGG 0.304794 7_1:-60736607 Msa1028130:CDS
TTCTCTCCTCTTGGGAGTCC+TGG 0.314869 7_1:-60735574 Msa1028130:CDS
ACTCTTTCAGCTTGAACAAT+AGG 0.315873 7_1:-60738131 Msa1028130:intron
TGAAGAATATCAAGACAATT+TGG 0.318748 7_1:-60737067 Msa1028130:intron
ATCAAAAGATAATATTGATT+TGG 0.319970 7_1:-60736619 Msa1028130:CDS
ACTGAAATATATTCAGGAAT+TGG 0.324650 7_1:-60736313 Msa1028130:CDS
CATACTTCTACTTGTTCTCT+TGG 0.329270 7_1:+60733362 None:intergenic
ATCAATAGAGGTTGCTTCCT+TGG 0.330932 7_1:+60735462 None:intergenic
TGTGCTTCAATTTGAATTGA+AGG 0.338087 7_1:-60733920 Msa1028130:three_prime_UTR
AGGAAATTAAAACATGTTAT+AGG 0.340908 7_1:-60735958 Msa1028130:CDS
GGAAAAGAGAACAGATTCTA+AGG 0.342608 7_1:-60737647 Msa1028130:five_prime_UTR
CCTCGTTGATACAATCAAAT+AGG 0.343701 7_1:+60734262 None:intergenic
CAAAGTTGCACTCGGATCAT+TGG 0.349701 7_1:+60736680 None:intergenic
AAAAGCAAATATACAAAGTA+TGG 0.351084 7_1:+60733450 None:intergenic
CTTCACTCAATTGTGATACT+TGG 0.352913 7_1:-60738206 Msa1028130:five_prime_UTR
AGAATCAAGGTACCGATTTA+GGG 0.355551 7_1:-60736773 Msa1028130:CDS
GAGATTTGTTGGCATTACTT+TGG 0.356400 7_1:-60734231 Msa1028130:CDS
AAGGTGTTGTTGAAGAAGAC+AGG 0.360997 7_1:+60738744 None:intergenic
CAAATAGGAGCTTCTGTTCA+TGG 0.365706 7_1:+60734277 None:intergenic
GTGAATCAAAAGATATTGAA+TGG 0.366498 7_1:-60736456 Msa1028130:CDS
AAAAGATTATTCTCAAGGTC+TGG 0.369185 7_1:-60734152 Msa1028130:CDS
AATCCAAATGGTTGTATTGC+CGG 0.374547 7_1:-60735104 Msa1028130:CDS
CCACACACACTCAATACTAT+AGG 0.376745 7_1:+60733420 None:intergenic
GAATTACTAGTTTCCTGATC+TGG 0.376874 7_1:+60735436 None:intergenic
CTCATCTCCAACAGGATAAC+CGG 0.380569 7_1:+60735303 None:intergenic
AAATCCAAATCATCTCAATA+TGG 0.383887 7_1:-60737606 Msa1028130:exon
GGAACAATACAAACTTCCTT+TGG 0.384091 7_1:+60738239 None:intergenic
GGCTGACATGCGGAGTAGCC+AGG 0.384163 7_1:+60734727 None:intergenic
TCGCAAGAAAAGCCGAGATA+TGG 0.388515 7_1:-60736706 Msa1028130:CDS
CTGATCTGGTTGATCAATAG+AGG 0.390787 7_1:+60735450 None:intergenic
ATATTGAGATGATTTGGATT+TGG 0.393893 7_1:+60737608 None:intergenic
CATTTGTAAACTCTAGTATA+AGG 0.397618 7_1:-60734191 Msa1028130:CDS
ACATTTACTGAAATATATTC+AGG 0.400999 7_1:-60736319 Msa1028130:CDS
CAAACTTCCTTTGGAGAGAA+AGG 0.405557 7_1:+60738248 None:intergenic
TTATCTGAGATGCTAGATAA+TGG 0.407281 7_1:-60735673 Msa1028130:CDS
ACGAAAGACATGGCGAGAAA+TGG 0.408272 7_1:-60734069 Msa1028130:CDS
TTGCAAGAAGCAAGTGCAAC+TGG 0.409618 7_1:+60733621 None:intergenic
GTGAATGAGGATACTCAATA+AGG 0.410964 7_1:-60733678 Msa1028130:three_prime_UTR
TCAATAGAGGTTGCTTCCTT+GGG 0.416892 7_1:+60735463 None:intergenic
CTTGATTCTTTATTTCATCC+TGG 0.419963 7_1:+60736787 None:intergenic
TTCCTGTACCTTTCTGCAAA+GGG 0.422137 7_1:-60733254 Msa1028130:three_prime_UTR
TGAACTAATGGAAACACTTC+AGG 0.423600 7_1:-60736394 Msa1028130:CDS
TTGTGATGGAAGAGTGAGAA+GGG 0.424275 7_1:+60734839 None:intergenic
AGATCCTTCGTTGTTTGATC+AGG 0.424810 7_1:-60734325 Msa1028130:CDS
TTCATCTTCAGATAAAACTT+TGG 0.425495 7_1:-60735509 Msa1028130:CDS
GTCCCGGCAATACAACCATT+TGG 0.425544 7_1:+60735101 None:intergenic
GAGTACAACTTCTCTCCTCT+TGG 0.431257 7_1:-60735583 Msa1028130:CDS
ACGTGAAAGCGGTTCTACTA+AGG 0.432259 7_1:-60735734 Msa1028130:CDS
CTCTATTGATCAACCAGATC+AGG 0.433500 7_1:-60735449 Msa1028130:CDS
GATATTGAATGGGAAAGATA+TGG 0.433715 7_1:-60736445 Msa1028130:CDS
TTCGCCATGCTCGCTTTACT+CGG 0.439037 7_1:-60737502 Msa1028130:CDS
TTCAAATACACACAAAAGAT+TGG 0.441670 7_1:+60738487 None:intergenic
CAACTTTCTTCAAATATTGG+AGG 0.444070 7_1:+60738402 None:intergenic
TTCACTCAATTGTGATACTT+GGG 0.448614 7_1:-60738205 Msa1028130:five_prime_UTR
AGGTTCTCATGGAGATTTGT+TGG 0.448701 7_1:-60734242 Msa1028130:CDS
TTCCCTTTGCAGAAAGGTAC+AGG 0.450497 7_1:+60733252 None:intergenic
ACAGGGTTTGGTTATGTTGA+AGG 0.450509 7_1:+60738762 None:intergenic
TCAGGTTATAAGCTCGGATA+AGG 0.453863 7_1:-60736376 Msa1028130:CDS
ATTACTTTGGGGTCTCGCCT+TGG 0.454078 7_1:-60734218 Msa1028130:CDS
TTCACATTATATGTTCCATC+AGG 0.455430 7_1:+60733696 None:intergenic
TTCCATCAGTTCTGCAAGAA+TGG 0.457038 7_1:+60733990 None:intergenic
ACAAGTCCCAAGAGAAAAGT+AGG 0.462911 7_1:-60733651 Msa1028130:three_prime_UTR
AATGAGATGTTCAACATCAA+TGG 0.464210 7_1:-60733231 Msa1028130:three_prime_UTR
CAGAAGAAGGACCTTTGTAA+TGG 0.471341 7_1:+60736019 None:intergenic
TTGTTGAAGAAGACAGGGTT+TGG 0.471382 7_1:+60738750 None:intergenic
AAGGTCTTGTTCGGTGAAGT+TGG 0.475523 7_1:+60736242 None:intergenic
AGTACAACTTCTCTCCTCTT+GGG 0.476372 7_1:-60735582 Msa1028130:CDS
TGTTCCAAAGTGTGCGGTGG+GGG 0.477038 7_1:+60734099 None:intergenic
TAGATTGCGAAGGTCTTGTT+CGG 0.478823 7_1:+60736233 None:intergenic
GCAACTATCTCATCTCCAAC+AGG 0.479145 7_1:+60735295 None:intergenic
GAATCTTCCTCGAATCCAAA+TGG 0.479506 7_1:-60735116 Msa1028130:CDS
ATCTCATTCCCTTTGCAGAA+AGG 0.482009 7_1:+60733246 None:intergenic
TGAATCAAAAGATATTGAAT+GGG 0.485077 7_1:-60736455 Msa1028130:CDS
GAAAGTAGTACAGATGTATC+TGG 0.485243 7_1:-60734799 Msa1028130:CDS
TCAACTTTCTCGCATGATCC+TGG 0.486209 7_1:-60735346 Msa1028130:CDS
CACAACAACAAGCATGCTCT+TGG 0.487864 7_1:-60737458 Msa1028130:intron
GAAAGAGAGAGAGTGGAGGA+AGG 0.493263 7_1:+60738725 None:intergenic
ATCCAAATGGTTGTATTGCC+GGG 0.494433 7_1:-60735103 Msa1028130:CDS
CACCATTCTTGCAGAACTGA+TGG 0.495569 7_1:-60733992 Msa1028130:CDS
AAAGATTATTCTCAAGGTCT+GGG 0.495861 7_1:-60734151 Msa1028130:CDS
GGAATCTTCAGACCCTAAAT+CGG 0.497835 7_1:+60736761 None:intergenic
TCTACAAGTTAATGCTGCTC+CGG 0.498979 7_1:+60733845 None:intergenic
GATCATTGGTGTCCATATCT+CGG 0.499215 7_1:+60736694 None:intergenic
CCAGTGGATCGATTTGATAG+AGG 0.499941 7_1:-60734465 Msa1028130:CDS
CAAACATCTTTAGCCCTCAC+AGG 0.503071 7_1:+60733539 None:intergenic
CTCCTCTTGGGAGTCCTGGA+GGG 0.504547 7_1:-60735570 Msa1028130:CDS
ATATTTGAAGAAAGTTGAGT+TGG 0.506312 7_1:-60738396 Msa1028130:five_prime_UTR
GGGGACGACAGTGGAGATGA+TGG 0.508211 7_1:+60734859 None:intergenic
CCTCTATCAAATCGATCCAC+TGG 0.508554 7_1:+60734465 None:intergenic
AAGATCAGTCAGGTTGTATG+TGG 0.509687 7_1:-60737547 Msa1028130:CDS
TGGATGACTGTAGAATGCTT+TGG 0.510584 7_1:-60733317 Msa1028130:three_prime_UTR
TAATGTGACAATAAAGCAGC+TGG 0.512429 7_1:-60733337 Msa1028130:three_prime_UTR
TTTCACCACAAACACTTGAC+CGG 0.513537 7_1:+60735407 None:intergenic
TAAAACTTTGGATGATAATG+AGG 0.513740 7_1:-60735497 Msa1028130:CDS
TTCAAATTTATCGTTACCAA+CGG 0.514503 7_1:+60735870 None:intergenic
TGTAAATCTGTTGCAAAGAT+CGG 0.515059 7_1:-60738354 Msa1028130:five_prime_UTR
TTGTATCAACGAGGTTCTCA+TGG 0.515798 7_1:-60734253 Msa1028130:CDS
TTATTAGCATCCCAAGGAAA+AGG 0.516693 7_1:-60737668 Msa1028130:five_prime_UTR
GGTCCTTCTTCTGTAAGAGT+TGG 0.516802 7_1:-60736009 Msa1028130:CDS
GATTTGCTGATCACATTACC+TGG 0.517200 7_1:-60733495 Msa1028130:three_prime_UTR
TTATTTGTTGGAACTTTCGA+TGG 0.518407 7_1:+60736147 None:intergenic
ATTGAGTGAAGCTATCTAGC+TGG 0.518790 7_1:+60738218 None:intergenic
ACTTACCAAGAACAAGTTTG+AGG 0.519064 7_1:-60737106 Msa1028130:CDS
TTTCCTGTACCTTTCTGCAA+AGG 0.519599 7_1:-60733255 Msa1028130:three_prime_UTR
GCAAACCGGTCAAGTGTTTG+TGG 0.520979 7_1:-60735412 Msa1028130:CDS
GGCTACTCCGCATGTCAGCC+TGG 0.522017 7_1:-60734724 Msa1028130:intron
AACACTTCAGGTTATAAGCT+CGG 0.525501 7_1:-60736382 Msa1028130:CDS
TGATCTTTCTCATACTGCAC+AGG 0.529127 7_1:+60737563 None:intergenic
AGCCAGATTCCTAAAACCCT+TGG 0.529149 7_1:-60735625 Msa1028130:CDS
TTTGTTCCAAAGTGTGCGGT+GGG 0.530184 7_1:+60734097 None:intergenic
AATGCTGTCATCCACGCCGC+TGG 0.531340 7_1:-60734399 Msa1028130:CDS
GTTCATACAAAACTCCTCAA+TGG 0.531665 7_1:+60737717 None:intergenic
CGTGAAAGCGGTTCTACTAA+GGG 0.534358 7_1:-60735733 Msa1028130:CDS
TCTTGCAAAACTACTAGAGT+AGG 0.535099 7_1:-60733606 Msa1028130:three_prime_UTR
ATTGATACCTTTCTCTCCAA+AGG 0.535569 7_1:-60738255 Msa1028130:five_prime_UTR
AGGTGTTGTTGAAGAAGACA+GGG 0.535707 7_1:+60738745 None:intergenic
TGATGCTCCAAATTCCCTCC+AGG 0.537229 7_1:+60735556 None:intergenic
AATACAACCATTTGGATTCG+AGG 0.540159 7_1:+60735109 None:intergenic
GCTGAAGCCGGTTATCCTGT+TGG 0.541979 7_1:-60735310 Msa1028130:CDS
CAGGATGAAATAAAGAATCA+AGG 0.547954 7_1:-60736786 Msa1028130:CDS
ATTGATGAAATGTCTTTCCT+CGG 0.550951 7_1:-60734358 Msa1028130:CDS
AAAGGAAAGAGAGAGAGTGG+AGG 0.551585 7_1:+60738721 None:intergenic
AAGAGAACAGATTCTAAGGA+AGG 0.552223 7_1:-60737643 Msa1028130:five_prime_UTR
GGTATATCGAGTACAGATAC+AGG 0.552753 7_1:+60734766 None:intergenic
TTCGCAATCTAAAACAAACT+AGG 0.553065 7_1:-60736221 Msa1028130:CDS
ATTAAAACATGTTATAGGAA+AGG 0.553776 7_1:-60735953 Msa1028130:CDS
CAGGAATTGGAGAATGCTCA+AGG 0.553896 7_1:-60736300 Msa1028130:CDS
AAACTAGTAATTCAGCAAAC+CGG 0.555303 7_1:-60735426 Msa1028130:CDS
CTATTTCAGCATCGAGTCGA+AGG 0.556142 7_1:+60734034 None:intergenic
CCATTAGTTCATTTGAACAA+AGG 0.559032 7_1:+60736406 None:intergenic
TCTATCAGGTTATGCCATTG+AGG 0.560160 7_1:-60737731 Msa1028130:intron
TCTCCTCTTGGGAGTCCTGG+AGG 0.561437 7_1:-60735571 Msa1028130:CDS
GATTTGTTGGCATTACTTTG+GGG 0.561733 7_1:-60734229 Msa1028130:CDS
GAACCAACTCTTACAGAAGA+AGG 0.562417 7_1:+60736006 None:intergenic
AAATGGTTGTATTGCCGGGA+CGG 0.562500 7_1:-60735099 Msa1028130:CDS
CGTGAAAACAACGGCTCCAG+AGG 0.565583 7_1:-60735898 Msa1028130:CDS
CCGTTCTCCGATGATGACCC+TGG 0.566455 7_1:-60734745 Msa1028130:CDS
AGAAGAGATGTTCATTGACC+AGG 0.566747 7_1:-60736805 Msa1028130:CDS
CGTGATATTGTCCATTACAA+AGG 0.567529 7_1:-60736030 Msa1028130:CDS
ATTGCAGAAATTCATGATGA+TGG 0.569020 7_1:-60735059 Msa1028130:CDS
AAACAAACTAGGGAGATTGT+CGG 0.569076 7_1:-60736210 Msa1028130:CDS
GAGTGAGAAGGGGACGACAG+TGG 0.574007 7_1:+60734850 None:intergenic
CAGTATGAGAAAGATCAGTC+AGG 0.574846 7_1:-60737557 Msa1028130:CDS
TCGCAATCTAAAACAAACTA+GGG 0.576209 7_1:-60736220 Msa1028130:CDS
ATTTGTTCCAAAGTGTGCGG+TGG 0.577455 7_1:+60734096 None:intergenic
GCTGACATGCGGAGTAGCCA+GGG 0.577538 7_1:+60734728 None:intergenic
GAGTCTTGTGAGTCAAAGTA+CGG 0.578745 7_1:-60733956 Msa1028130:CDS
GGCGAGAAATGGAACATGGA+TGG 0.579182 7_1:-60734058 Msa1028130:CDS
ATTATCGTCGTCATGCATCA+AGG 0.579434 7_1:+60736554 None:intergenic
AAGCGGTTCTACTAAGGGAA+AGG 0.580376 7_1:-60735728 Msa1028130:CDS
CATGTTGATACTGCTGAAGC+CGG 0.580620 7_1:-60735322 Msa1028130:CDS
ACCTCCGAGTAAAGCGAGCA+TGG 0.585160 7_1:+60737498 None:intergenic
TCTGATTTCAAAGTTGCACT+CGG 0.586105 7_1:+60736672 None:intergenic
GTTATAGGAAAGGAGAAGCA+TGG 0.586605 7_1:-60735943 Msa1028130:CDS
AAGAGATAGTATTCTGCCAA+GGG 0.587310 7_1:+60735609 None:intergenic
TCGTTTATGTTTCAGGACAG+AGG 0.591261 7_1:-60736891 Msa1028130:intron
TTTAATTCAGAACGTGAAAG+CGG 0.591658 7_1:-60735745 Msa1028130:CDS
TTTGTGATGGAAGAGTGAGA+AGG 0.592181 7_1:+60734838 None:intergenic
GAATGGGAAAGATATGGTAG+AGG 0.592899 7_1:-60736439 Msa1028130:CDS
AGATCAGTCAGGTTGTATGT+GGG 0.593152 7_1:-60737546 Msa1028130:CDS
AGAGGAGAGAAGTTGTACTC+AGG 0.593671 7_1:+60735586 None:intergenic
AAAATAATATAACTTTATGG+TGG 0.593825 7_1:+60738573 None:intergenic
GAAGAGATAGTATTCTGCCA+AGG 0.594055 7_1:+60735608 None:intergenic
CTCAGAGGAACATCATGCAC+CGG 0.594423 7_1:-60733864 Msa1028130:three_prime_UTR
ATTATTCTCAAGGTCTGGGA+AGG 0.596236 7_1:-60734147 Msa1028130:CDS
TTGTACTTCAATTTGAAGGG+AGG 0.597864 7_1:-60733811 Msa1028130:three_prime_UTR
ATCATCTCAATATGGCAAAG+AGG 0.599840 7_1:-60737598 Msa1028130:exon
GTATGAACATAGATAGCGAA+AGG 0.602728 7_1:-60737702 Msa1028130:five_prime_UTR
AGTTCACTTACAAAGCATCA+AGG 0.603008 7_1:+60738166 None:intergenic
GTTGTAAAAGGAGACAAGAC+TGG 0.604619 7_1:-60735787 Msa1028130:CDS
TCACTCAATTGTGATACTTG+GGG 0.607195 7_1:-60738204 Msa1028130:five_prime_UTR
TCCTCAAAACAAATTTGCAG+TGG 0.609356 7_1:+60734501 None:intergenic
GGCTCCAGAGGTAAAACCGT+TGG 0.612934 7_1:-60735886 Msa1028130:CDS
TCGAGTACAGATACAGGACT+TGG 0.613313 7_1:+60734772 None:intergenic
TGAGGATCACTTGTCGCCCA+AGG 0.613313 7_1:-60735479 Msa1028130:CDS
ATTACCTTATTAGCATCCCA+AGG 0.613951 7_1:-60737674 Msa1028130:five_prime_UTR
GATCAGTCAGGTTGTATGTG+GGG 0.622298 7_1:-60737545 Msa1028130:CDS
AGGTCTGGGAAGGAGTGTGT+TGG 0.624884 7_1:-60734137 Msa1028130:CDS
TGGAACATATAATGTGAATG+AGG 0.626298 7_1:-60733691 Msa1028130:three_prime_UTR
GTGACATACTTCACCCTGTG+AGG 0.627618 7_1:-60733553 Msa1028130:three_prime_UTR
CCAGGGTCATCATCGGAGAA+CGG 0.629965 7_1:+60734745 None:intergenic
GGAGTAGCCAGGGTCATCAT+CGG 0.631037 7_1:+60734738 None:intergenic
TGTGATGGAAGAGTGAGAAG+GGG 0.631200 7_1:+60734840 None:intergenic
CCTATAGTATTGAGTGTGTG+TGG 0.632437 7_1:-60733420 Msa1028130:three_prime_UTR
AGGAATTGGAGAATGCTCAA+GGG 0.638254 7_1:-60736299 Msa1028130:CDS
TCAGCAGTATCAACATGACC+AGG 0.638821 7_1:+60735328 None:intergenic
TGACATACTTCACCCTGTGA+GGG 0.639851 7_1:-60733552 Msa1028130:three_prime_UTR
ATGTTCTGAGTGCTTGAATG+AGG 0.640544 7_1:-60735033 Msa1028130:intron
ACATGGCGAGAAATGGAACA+TGG 0.641055 7_1:-60734062 Msa1028130:CDS
AAACATCTTTAGCCCTCACA+GGG 0.644062 7_1:+60733540 None:intergenic
GAGTTTACAAATGATAGCCA+AGG 0.645928 7_1:+60734201 None:intergenic
ACAAATTGTCACGAAAGACA+TGG 0.646425 7_1:-60734079 Msa1028130:CDS
GGTTTCAAACATATACGTTG+AGG 0.652839 7_1:-60735707 Msa1028130:CDS
TTGATCTTGTGTCAAGCCAG+CGG 0.655780 7_1:+60734383 None:intergenic
AGGATCTAGTATCTTGTCCG+AGG 0.656229 7_1:+60734341 None:intergenic
GATAATGGAGATGATAACAC+GGG 0.657246 7_1:-60735658 Msa1028130:CDS
AAAGAGACACTAAACACCAA+AGG 0.657910 7_1:+60738810 None:intergenic
AATGCTGAACGTGAAAACAA+CGG 0.658005 7_1:-60735907 Msa1028130:CDS
CCTATTTGATTGTATCAACG+AGG 0.666643 7_1:-60734262 Msa1028130:CDS
TCTACCTGATCAAACAACGA+AGG 0.666820 7_1:+60734321 None:intergenic
TTGTTCCAAAGTGTGCGGTG+GGG 0.669382 7_1:+60734098 None:intergenic
GAATTGAAGGACATCAAGAG+CGG 0.677461 7_1:-60733907 Msa1028130:three_prime_UTR
GATCTTTCTCATACTGCACA+GGG 0.679403 7_1:+60737564 None:intergenic
TTCCCTCCAGGACTCCCAAG+AGG 0.686832 7_1:+60735568 None:intergenic
GGAACACGAATCTTCACCAG+TGG 0.687391 7_1:-60734481 Msa1028130:CDS
AGATAATGGAGATGATAACA+CGG 0.690451 7_1:-60735659 Msa1028130:CDS
ACAATTTGTTCCAAAGTGTG+CGG 0.694935 7_1:+60734093 None:intergenic
GGAGATGAGATAGTTGCTGA+AGG 0.704201 7_1:-60735289 Msa1028130:intron
ATTTGTAGATGACAACTCAG+AGG 0.711201 7_1:-60733879 Msa1028130:three_prime_UTR
CTTGTGTCAAGCCAGCGGCG+TGG 0.713478 7_1:+60734388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAATAATATAACTTTA+TGG + chr7_1:60733463-60733482 None:intergenic 10.0%
!! GTAAATATATAATAAAAATG+TGG - chr7_1:60734684-60734703 Msa1028130:intron 10.0%
!! AAAATAATATAACTTTATGG+TGG + chr7_1:60733460-60733479 None:intergenic 15.0%
!!! TTTGAAATTTGAGTTAATTA+AGG - chr7_1:60733723-60733742 Msa1028130:three_prime_UTR 15.0%
!!! ATCAAAAGATAATATTGATT+TGG - chr7_1:60735411-60735430 Msa1028130:CDS 15.0%
!! ACAAAATCTTAAATTTAAAG+AGG + chr7_1:60737098-60737117 None:intergenic 15.0%
!!! AGAATAATCTTTTTCATATT+TGG + chr7_1:60737871-60737890 None:intergenic 15.0%
!! ACTATAGACAATAAAAATGA+AGG + chr7_1:60733413-60733432 None:intergenic 20.0%
!! AAAGCAATGATTAAACTTAA+TGG + chr7_1:60733601-60733620 None:intergenic 20.0%
!! ACTTAAATATAAGCAGAATT+CGG - chr7_1:60734052-60734071 Msa1028130:CDS 20.0%
!! GTCACATGATTAAATAATTT+AGG + chr7_1:60734156-60734175 None:intergenic 20.0%
!!! GTATTTAAACCACAAATTTT+TGG + chr7_1:60735044-60735063 None:intergenic 20.0%
!!! CAATATTATCTTTTGATTGT+TGG + chr7_1:60735408-60735427 None:intergenic 20.0%
!! TGAATCAAAAGATATTGAAT+GGG - chr7_1:60735575-60735594 Msa1028130:CDS 20.0%
!! TATTTCAGTAAATGTGAATT+TGG + chr7_1:60735706-60735725 None:intergenic 20.0%
!! ACATTTACTGAAATATATTC+AGG - chr7_1:60735711-60735730 Msa1028130:CDS 20.0%
!! AGGAAATTAAAACATGTTAT+AGG - chr7_1:60736072-60736091 Msa1028130:CDS 20.0%
!! ATTAAAACATGTTATAGGAA+AGG - chr7_1:60736077-60736096 Msa1028130:CDS 20.0%
!!! CACAAAAGATATAAATGTTT+TGG - chr7_1:60736892-60736911 Msa1028130:intron 20.0%
!!! TTAATATAAATCACCGATTT+GGG - chr7_1:60737044-60737063 Msa1028130:intron 20.0%
!! TTACGAGATTAAATTTGATA+TGG + chr7_1:60737470-60737489 None:intergenic 20.0%
!! TATGAAAAAGATTATTCTCA+AGG - chr7_1:60737873-60737892 Msa1028130:intron 20.0%
!!! TGAAATAGTTAGTTTTGAAA+TGG - chr7_1:60738011-60738030 Msa1028130:intron 20.0%
!!! GAAATAGTTAGTTTTGAAAT+GGG - chr7_1:60738012-60738031 Msa1028130:intron 20.0%
!!! ATTTTTTTAATCATACCTGA+TGG - chr7_1:60738319-60738338 Msa1028130:five_prime_UTR 20.0%
!! AAAAGCAAATATACAAAGTA+TGG + chr7_1:60738583-60738602 None:intergenic 20.0%
!!! TACTTTGTATATTTGCTTTT+TGG - chr7_1:60738583-60738602 Msa1028130:five_prime_UTR 20.0%
!!! TTTCCTTTTTTTTCAATGCT+GGG - chr7_1:60733324-60733343 Msa1028130:three_prime_UTR 25.0%
!!! AATGAAGGATTTTTTCAACT+GGG + chr7_1:60733398-60733417 None:intergenic 25.0%
!!! AAATGAAGGATTTTTTCAAC+TGG + chr7_1:60733399-60733418 None:intergenic 25.0%
!!! TCATTGAGTTTTATCTTAGT+TGG - chr7_1:60733518-60733537 Msa1028130:three_prime_UTR 25.0%
! TTCAAATACACACAAAAGAT+TGG + chr7_1:60733546-60733565 None:intergenic 25.0%
! ACTCAACTTTCTTCAAATAT+TGG + chr7_1:60733634-60733653 None:intergenic 25.0%
! ATATTTGAAGAAAGTTGAGT+TGG - chr7_1:60733634-60733653 Msa1028130:three_prime_UTR 25.0%
! GTTAGAAAGACTGAAAATTA+TGG + chr7_1:60733941-60733960 None:intergenic 25.0%
!! CATAAATTTGGGTTAGAAAA+TGG + chr7_1:60733985-60734004 None:intergenic 25.0%
!! TAACCCAAATTTATGTTTTG+AGG - chr7_1:60733990-60734009 Msa1028130:CDS 25.0%
! ACTCCTCAAAACATAAATTT+GGG + chr7_1:60733996-60734015 None:intergenic 25.0%
! AACTCCTCAAAACATAAATT+TGG + chr7_1:60733997-60734016 None:intergenic 25.0%
!! ATATTGAGATGATTTGGATT+TGG + chr7_1:60734425-60734444 None:intergenic 25.0%
! AAATCCAAATCATCTCAATA+TGG - chr7_1:60734424-60734443 Msa1028130:CDS 25.0%
! AGCAAAGTTGACAAATTATT+TGG + chr7_1:60734635-60734654 None:intergenic 25.0%
!!! TTTCACCTTTTTGTTTCTAT+AGG - chr7_1:60734895-60734914 Msa1028130:intron 25.0%
!!! TTCACCTTTTTGTTTCTATA+GGG - chr7_1:60734896-60734915 Msa1028130:intron 25.0%
! TGAAGAATATCAAGACAATT+TGG - chr7_1:60734963-60734982 Msa1028130:intron 25.0%
!!! TATTGATTTGGACAAGATAA+TGG - chr7_1:60735423-60735442 Msa1028130:CDS 25.0%
! GTGAATCAAAAGATATTGAA+TGG - chr7_1:60735574-60735593 Msa1028130:CDS 25.0%
! ACTGAAATATATTCAGGAAT+TGG - chr7_1:60735717-60735736 Msa1028130:CDS 25.0%
!!! TCGTAAATTTTTCTGGAAAA+AGG - chr7_1:60735852-60735871 Msa1028130:CDS 25.0%
!!! GTTTCTGCATTTTTATTTGT+TGG + chr7_1:60735898-60735917 None:intergenic 25.0%
! AAATAAAAATGCAGAAACTG+AGG - chr7_1:60735900-60735919 Msa1028130:CDS 25.0%
! TTCAGAATGACAATTCTATT+TGG + chr7_1:60735928-60735947 None:intergenic 25.0%
!! TTTCCTTTTTATCTCTGTAA+GGG + chr7_1:60736058-60736077 None:intergenic 25.0%
!! ATTTCCTTTTTATCTCTGTA+AGG + chr7_1:60736059-60736078 None:intergenic 25.0%
! TTCAAATTTATCGTTACCAA+CGG + chr7_1:60736163-60736182 None:intergenic 25.0%
!!! CAATTTTTTCAGTGAAGAAA+CGG + chr7_1:60736206-60736225 None:intergenic 25.0%
!! TTCACGTTCTGAATTAAATT+TGG + chr7_1:60736283-60736302 None:intergenic 25.0%
! TTCATCTTCAGATAAAACTT+TGG - chr7_1:60736521-60736540 Msa1028130:CDS 25.0%
!! TAAAACTTTGGATGATAATG+AGG - chr7_1:60736533-60736552 Msa1028130:CDS 25.0%
!! GTTAATATAAATCACCGATT+TGG - chr7_1:60737043-60737062 Msa1028130:intron 25.0%
!!! TAATATAAATCACCGATTTG+GGG - chr7_1:60737045-60737064 Msa1028130:intron 25.0%
!! CTATCATTTGATTCTTTTAC+AGG - chr7_1:60737128-60737147 Msa1028130:intron 25.0%
! ATTTGATATGGTAAGTAAAG+AGG + chr7_1:60737458-60737477 None:intergenic 25.0%
! CATTTGTAAACTCTAGTATA+AGG - chr7_1:60737839-60737858 Msa1028130:intron 25.0%
!!! ATCTTTTTCATATTTGGAGT+TGG + chr7_1:60737865-60737884 None:intergenic 25.0%
!! GAGATGTCTTAAACTTTTTA+AGG - chr7_1:60738276-60738295 Msa1028130:five_prime_UTR 25.0%
!!! TAAACTTTTTAAGGCATGAA+TGG - chr7_1:60738285-60738304 Msa1028130:five_prime_UTR 25.0%
!! TTCAATGCAGCAATTTTATT+TGG - chr7_1:60738453-60738472 Msa1028130:five_prime_UTR 25.0%
!!! CTTTCCTTTTTTTTCAATGC+TGG - chr7_1:60733323-60733342 Msa1028130:three_prime_UTR 30.0%
AGCGAAAAAGTGAAGAAAAA+TGG + chr7_1:60733363-60733382 None:intergenic 30.0%
CAACTTTCTTCAAATATTGG+AGG + chr7_1:60733631-60733650 None:intergenic 30.0%
TGTAAATCTGTTGCAAAGAT+CGG - chr7_1:60733676-60733695 Msa1028130:three_prime_UTR 30.0%
TTCACTCAATTGTGATACTT+GGG - chr7_1:60733825-60733844 Msa1028130:three_prime_UTR 30.0%
TTGCTTATATTCAAGTCCTA+AGG - chr7_1:60734115-60734134 Msa1028130:CDS 30.0%
TGCTTATATTCAAGTCCTAA+GGG - chr7_1:60734116-60734135 Msa1028130:CDS 30.0%
ATTATTTGTCCCTTCTTGTT+AGG - chr7_1:60734190-60734209 Msa1028130:CDS 30.0%
TTTGCCATATTGAGATGATT+TGG + chr7_1:60734431-60734450 None:intergenic 30.0%
TGTATTCCTGAAAAGATATG+CGG + chr7_1:60734760-60734779 None:intergenic 30.0%
!!! TCACCTTTTTGTTTCTATAG+GGG - chr7_1:60734897-60734916 Msa1028130:intron 30.0%
AAAGAAAAAAGATCCAGAGT+TGG + chr7_1:60735014-60735033 None:intergenic 30.0%
TTCTTTCAGCCAAAAATTTG+TGG - chr7_1:60735032-60735051 Msa1028130:intron 30.0%
ACATGACTATGCATAATGTA+AGG + chr7_1:60735104-60735123 None:intergenic 30.0%
AATGGTATCGTTTATGTTTC+AGG - chr7_1:60735132-60735151 Msa1028130:CDS 30.0%
! CTTGATTCTTTATTTCATCC+TGG + chr7_1:60735246-60735265 None:intergenic 30.0%
CAGGATGAAATAAAGAATCA+AGG - chr7_1:60735244-60735263 Msa1028130:intron 30.0%
GATATTGAATGGGAAAGATA+TGG - chr7_1:60735585-60735604 Msa1028130:CDS 30.0%
CCATTAGTTCATTTGAACAA+AGG + chr7_1:60735627-60735646 None:intergenic 30.0%
CCTTTGTTCAAATGAACTAA+TGG - chr7_1:60735624-60735643 Msa1028130:CDS 30.0%
!!! TAGTTTGTTTTAGATTGCGA+AGG + chr7_1:60735810-60735829 None:intergenic 30.0%
! TTCGCAATCTAAAACAAACT+AGG - chr7_1:60735809-60735828 Msa1028130:CDS 30.0%
! TCGCAATCTAAAACAAACTA+GGG - chr7_1:60735810-60735829 Msa1028130:CDS 30.0%
AGAAAAATTTACGATGCTTG+CGG + chr7_1:60735846-60735865 None:intergenic 30.0%
! TTATTTGTTGGAACTTTCGA+TGG + chr7_1:60735886-60735905 None:intergenic 30.0%
! TTTGAATTTTGCATGCTTGT+TGG + chr7_1:60735958-60735977 None:intergenic 30.0%
TTTCCCTTACAGAGATAAAA+AGG - chr7_1:60736052-60736071 Msa1028130:CDS 30.0%
TCTTCACTGAAAAAATTGCA+AGG - chr7_1:60736208-60736227 Msa1028130:CDS 30.0%
! CCTTTTACAACATCAAACAT+AGG + chr7_1:60736234-60736253 None:intergenic 30.0%
CCTATGTTTGATGTTGTAAA+AGG - chr7_1:60736231-60736250 Msa1028130:CDS 30.0%
TTTAATTCAGAACGTGAAAG+CGG - chr7_1:60736285-60736304 Msa1028130:CDS 30.0%
! TTATCTGAGATGCTAGATAA+TGG - chr7_1:60736357-60736376 Msa1028130:CDS 30.0%
!! AGATAATGGAGATGATAACA+CGG - chr7_1:60736371-60736390 Msa1028130:CDS 30.0%
AAACTAGTAATTCAGCAAAC+CGG - chr7_1:60736604-60736623 Msa1028130:CDS 30.0%
CCTGCACAAAAATTAAGAAA+GGG + chr7_1:60736860-60736879 None:intergenic 30.0%
ACCTGCACAAAAATTAAGAA+AGG + chr7_1:60736861-60736880 None:intergenic 30.0%
! CTGCAATATCATGATTTTGT+TGG + chr7_1:60736958-60736977 None:intergenic 30.0%
ATTGCAGAAATTCATGATGA+TGG - chr7_1:60736971-60736990 Msa1028130:intron 30.0%
!!! CTCTTCAGTTTTATTTGTGA+TGG + chr7_1:60737208-60737227 None:intergenic 30.0%
ATTGATGAAATGTCTTTCCT+CGG - chr7_1:60737672-60737691 Msa1028130:five_prime_UTR 30.0%
!! AGATTTGTTGGCATTACTTT+GGG - chr7_1:60737800-60737819 Msa1028130:intron 30.0%
AAAAGATTATTCTCAAGGTC+TGG - chr7_1:60737878-60737897 Msa1028130:intron 30.0%
AAAGATTATTCTCAAGGTCT+GGG - chr7_1:60737879-60737898 Msa1028130:intron 30.0%
TGTGCTTCAATTTGAATTGA+AGG - chr7_1:60738110-60738129 Msa1028130:intron 30.0%
TTCACATTATATGTTCCATC+AGG + chr7_1:60738337-60738356 None:intergenic 30.0%
TGGAACATATAATGTGAATG+AGG - chr7_1:60738339-60738358 Msa1028130:five_prime_UTR 30.0%
!!! TTACCTGGTGTGTTATTTTT+TGG - chr7_1:60738550-60738569 Msa1028130:five_prime_UTR 30.0%
AAACCAAAAAATAACACACC+AGG + chr7_1:60738556-60738575 None:intergenic 30.0%
AATGAGATGTTCAACATCAA+TGG - chr7_1:60738799-60738818 Msa1028130:five_prime_UTR 30.0%
AAAAAAGGAAAGAGAGAGAG+TGG + chr7_1:60733315-60733334 None:intergenic 35.0%
!!! CTTTTTTTTCAATGCTGGGT+CGG - chr7_1:60733328-60733347 Msa1028130:three_prime_UTR 35.0%
ATTGATACCTTTCTCTCCAA+AGG - chr7_1:60733775-60733794 Msa1028130:three_prime_UTR 35.0%
GGAACAATACAAACTTCCTT+TGG + chr7_1:60733794-60733813 None:intergenic 35.0%
CTTCACTCAATTGTGATACT+TGG - chr7_1:60733824-60733843 Msa1028130:three_prime_UTR 35.0%
TCACTCAATTGTGATACTTG+GGG - chr7_1:60733826-60733845 Msa1028130:three_prime_UTR 35.0%
TGATACTTGGGGAATGAAAT+TGG - chr7_1:60733837-60733856 Msa1028130:three_prime_UTR 35.0%
! AGTTCACTTACAAAGCATCA+AGG + chr7_1:60733867-60733886 None:intergenic 35.0%
ACTCTTTCAGCTTGAACAAT+AGG - chr7_1:60733899-60733918 Msa1028130:three_prime_UTR 35.0%
GACCAAACTATATACTACTC+TGG - chr7_1:60734029-60734048 Msa1028130:CDS 35.0%
GTCCAGAGTAGTATATAGTT+TGG + chr7_1:60734034-60734053 None:intergenic 35.0%
AAGCAGAATTCGGTCAAATA+TGG - chr7_1:60734062-60734081 Msa1028130:CDS 35.0%
GAAGAACAACCTAACAAGAA+GGG + chr7_1:60734202-60734221 None:intergenic 35.0%
TGAAGAACAACCTAACAAGA+AGG + chr7_1:60734203-60734222 None:intergenic 35.0%
AATGTGTATCTCCATCTATC+AGG - chr7_1:60734285-60734304 Msa1028130:CDS 35.0%
GTTCATACAAAACTCCTCAA+TGG + chr7_1:60734316-60734335 None:intergenic 35.0%
GTATGAACATAGATAGCGAA+AGG - chr7_1:60734328-60734347 Msa1028130:CDS 35.0%
ATTACCTTATTAGCATCCCA+AGG - chr7_1:60734356-60734375 Msa1028130:CDS 35.0%
! TTTTCCTTGGGATGCTAATA+AGG + chr7_1:60734363-60734382 None:intergenic 35.0%
TTATTAGCATCCCAAGGAAA+AGG - chr7_1:60734362-60734381 Msa1028130:CDS 35.0%
! GTTCTCTTTTCCTTTTCCTT+GGG + chr7_1:60734375-60734394 None:intergenic 35.0%
! TGTTCTCTTTTCCTTTTCCT+TGG + chr7_1:60734376-60734395 None:intergenic 35.0%
GGAAAAGAGAACAGATTCTA+AGG - chr7_1:60734383-60734402 Msa1028130:CDS 35.0%
! AAGAGAACAGATTCTAAGGA+AGG - chr7_1:60734387-60734406 Msa1028130:CDS 35.0%
ATCATCTCAATATGGCAAAG+AGG - chr7_1:60734432-60734451 Msa1028130:CDS 35.0%
CAAGTCCAAATTGTTTAGCA+CGG + chr7_1:60734710-60734729 None:intergenic 35.0%
! GTTTTTCCGCATATCTTTTC+AGG - chr7_1:60734751-60734770 Msa1028130:CDS 35.0%
ACTTACCAAGAACAAGTTTG+AGG - chr7_1:60734924-60734943 Msa1028130:intron 35.0%
!! GTTTGAGGCATTGAGTAATT+TGG - chr7_1:60734939-60734958 Msa1028130:intron 35.0%
TCTATACGATTATCCAACTC+TGG - chr7_1:60734998-60735017 Msa1028130:intron 35.0%
AAATTCAGCACAAGTTGCAT+TGG - chr7_1:60735068-60735087 Msa1028130:CDS 35.0%
! ATAGTCATGTGCTGATACAA+TGG - chr7_1:60735114-60735133 Msa1028130:CDS 35.0%
!! AAGAATCAAGGTACCGATTT+AGG - chr7_1:60735256-60735275 Msa1028130:intron 35.0%
!! AGAATCAAGGTACCGATTTA+GGG - chr7_1:60735257-60735276 Msa1028130:intron 35.0%
! TCTTTTCGAATCTGTCTTCA+GGG + chr7_1:60735293-60735312 None:intergenic 35.0%
! TTCTTTTCGAATCTGTCTTC+AGG + chr7_1:60735294-60735313 None:intergenic 35.0%
TCTGATTTCAAAGTTGCACT+CGG + chr7_1:60735361-60735380 None:intergenic 35.0%
! CTTCAGAACTGACATTCTTT+TGG + chr7_1:60735525-60735544 None:intergenic 35.0%
TGAACTAATGGAAACACTTC+AGG - chr7_1:60735636-60735655 Msa1028130:CDS 35.0%
! AACACTTCAGGTTATAAGCT+CGG - chr7_1:60735648-60735667 Msa1028130:CDS 35.0%
AAACAAACTAGGGAGATTGT+CGG - chr7_1:60735820-60735839 Msa1028130:CDS 35.0%
!! GCAAGCATCGTAAATTTTTC+TGG - chr7_1:60735845-60735864 Msa1028130:CDS 35.0%
CGTGATATTGTCCATTACAA+AGG - chr7_1:60736000-60736019 Msa1028130:CDS 35.0%
AATGCTGAACGTGAAAACAA+CGG - chr7_1:60736123-60736142 Msa1028130:CDS 35.0%
GTGAAGAAACGGTCTTTATT+AGG + chr7_1:60736195-60736214 None:intergenic 35.0%
GGTTTCAAACATATACGTTG+AGG - chr7_1:60736323-60736342 Msa1028130:CDS 35.0%
!! GATAATGGAGATGATAACAC+GGG - chr7_1:60736372-60736391 Msa1028130:CDS 35.0%
AAGAGATAGTATTCTGCCAA+GGG + chr7_1:60736424-60736443 None:intergenic 35.0%
! GAATTACTAGTTTCCTGATC+TGG + chr7_1:60736597-60736616 None:intergenic 35.0%
! CCCTTTCTTAATTTTTGTGC+AGG - chr7_1:60736857-60736876 Msa1028130:CDS 35.0%
AATACAACCATTTGGATTCG+AGG + chr7_1:60736924-60736943 None:intergenic 35.0%
AATCCAAATGGTTGTATTGC+CGG - chr7_1:60736926-60736945 Msa1028130:intron 35.0%
TAGCAAAGATATCCCCAAAT+CGG + chr7_1:60737060-60737079 None:intergenic 35.0%
GAAAGTAGTACAGATGTATC+TGG - chr7_1:60737231-60737250 Msa1028130:intron 35.0%
! ACTTTAAGAACATAGCCAGA+GGG + chr7_1:60737360-60737379 None:intergenic 35.0%
! AACTTTAAGAACATAGCCAG+AGG + chr7_1:60737361-60737380 None:intergenic 35.0%
TGGTAAGTAAAGAGGTTAGT+TGG + chr7_1:60737450-60737469 None:intergenic 35.0%
TCCTCAAAACAAATTTGCAG+TGG + chr7_1:60737532-60737551 None:intergenic 35.0%
CCTCGTTGATACAATCAAAT+AGG + chr7_1:60737771-60737790 None:intergenic 35.0%
CCTATTTGATTGTATCAACG+AGG - chr7_1:60737768-60737787 Msa1028130:intron 35.0%
!! GAGATTTGTTGGCATTACTT+TGG - chr7_1:60737799-60737818 Msa1028130:intron 35.0%
!! GATTTGTTGGCATTACTTTG+GGG - chr7_1:60737801-60737820 Msa1028130:intron 35.0%
GAGTTTACAAATGATAGCCA+AGG + chr7_1:60737832-60737851 None:intergenic 35.0%
! ACAATTTGTTCCAAAGTGTG+CGG + chr7_1:60737940-60737959 None:intergenic 35.0%
ACAAATTGTCACGAAAGACA+TGG - chr7_1:60737951-60737970 Msa1028130:intron 35.0%
ATTTGTAGATGACAACTCAG+AGG - chr7_1:60738151-60738170 Msa1028130:five_prime_UTR 35.0%
GTGAATGAGGATACTCAATA+AGG - chr7_1:60738352-60738371 Msa1028130:five_prime_UTR 35.0%
!! TAGCTTCCTACTTTTCTCTT+GGG + chr7_1:60738388-60738407 None:intergenic 35.0%
TCTTGCAAAACTACTAGAGT+AGG - chr7_1:60738424-60738443 Msa1028130:five_prime_UTR 35.0%
CATACTTCTACTTGTTCTCT+TGG + chr7_1:60738671-60738690 None:intergenic 35.0%
TAATGTGACAATAAAGCAGC+TGG - chr7_1:60738693-60738712 Msa1028130:five_prime_UTR 35.0%
! ACAGGGTTTGGTTATGTTGA+AGG + chr7_1:60733271-60733290 None:intergenic 40.0%
TTGTTGAAGAAGACAGGGTT+TGG + chr7_1:60733283-60733302 None:intergenic 40.0%
!! AGGTGTTGTTGAAGAAGACA+GGG + chr7_1:60733288-60733307 None:intergenic 40.0%
!! AAGGTGTTGTTGAAGAAGAC+AGG + chr7_1:60733289-60733308 None:intergenic 40.0%
! CGACCCAGCATTGAAAAAAA+AGG + chr7_1:60733330-60733349 None:intergenic 40.0%
GGCTTGTGCATGAAGAAAAA+AGG - chr7_1:60733744-60733763 Msa1028130:three_prime_UTR 40.0%
! CAAACTTCCTTTGGAGAGAA+AGG + chr7_1:60733785-60733804 None:intergenic 40.0%
ATTGAGTGAAGCTATCTAGC+TGG + chr7_1:60733815-60733834 None:intergenic 40.0%
GAATTCGGTCAAATATGGAC+CGG - chr7_1:60734067-60734086 Msa1028130:CDS 40.0%
AATATGGACCGGATATGGAT+CGG - chr7_1:60734078-60734097 Msa1028130:CDS 40.0%
ACATGTATCCGATCCATATC+CGG + chr7_1:60734089-60734108 None:intergenic 40.0%
GCTCAATAACATACTCCCTT+AGG + chr7_1:60734134-60734153 None:intergenic 40.0%
CAATGGCATAACCTGATAGA+TGG + chr7_1:60734299-60734318 None:intergenic 40.0%
TCTATCAGGTTATGCCATTG+AGG - chr7_1:60734299-60734318 Msa1028130:CDS 40.0%
GATCTTTCTCATACTGCACA+GGG + chr7_1:60734469-60734488 None:intergenic 40.0%
TGATCTTTCTCATACTGCAC+AGG + chr7_1:60734470-60734489 None:intergenic 40.0%
CAGTATGAGAAAGATCAGTC+AGG - chr7_1:60734473-60734492 Msa1028130:CDS 40.0%
! AAGATCAGTCAGGTTGTATG+TGG - chr7_1:60734483-60734502 Msa1028130:CDS 40.0%
! AGATCAGTCAGGTTGTATGT+GGG - chr7_1:60734484-60734503 Msa1028130:CDS 40.0%
CAGCCCCTATAGAAACAAAA+AGG + chr7_1:60734903-60734922 None:intergenic 40.0%
! CAATGCCTCAAACTTGTTCT+TGG + chr7_1:60734932-60734951 None:intergenic 40.0%
TCGTTTATGTTTCAGGACAG+AGG - chr7_1:60735139-60735158 Msa1028130:CDS 40.0%
AGAAGAGATGTTCATTGACC+AGG - chr7_1:60735225-60735244 Msa1028130:intron 40.0%
GGAATCTTCAGACCCTAAAT+CGG + chr7_1:60735272-60735291 None:intergenic 40.0%
! GATCATTGGTGTCCATATCT+CGG + chr7_1:60735339-60735358 None:intergenic 40.0%
ATTATCGTCGTCATGCATCA+AGG + chr7_1:60735479-60735498 None:intergenic 40.0%
GAATGGGAAAGATATGGTAG+AGG - chr7_1:60735591-60735610 Msa1028130:CDS 40.0%
TCAGGTTATAAGCTCGGATA+AGG - chr7_1:60735654-60735673 Msa1028130:CDS 40.0%
AGGAATTGGAGAATGCTCAA+GGG - chr7_1:60735731-60735750 Msa1028130:CDS 40.0%
!! TAGATTGCGAAGGTCTTGTT+CGG + chr7_1:60735800-60735819 None:intergenic 40.0%
!! ATTTTGCATGCTTGTTGGTG+CGG + chr7_1:60735953-60735972 None:intergenic 40.0%
CAGAAGAAGGACCTTTGTAA+TGG + chr7_1:60736014-60736033 None:intergenic 40.0%
GAACCAACTCTTACAGAAGA+AGG + chr7_1:60736027-60736046 None:intergenic 40.0%
GTTATAGGAAAGGAGAAGCA+TGG - chr7_1:60736087-60736106 Msa1028130:CDS 40.0%
GTTGTAAAAGGAGACAAGAC+TGG - chr7_1:60736243-60736262 Msa1028130:CDS 40.0%
! AGTATTCTGCCAAGGGTTTT+AGG + chr7_1:60736417-60736436 None:intergenic 40.0%
GAAGAGATAGTATTCTGCCA+AGG + chr7_1:60736425-60736444 None:intergenic 40.0%
AGTACAACTTCTCTCCTCTT+GGG - chr7_1:60736448-60736467 Msa1028130:CDS 40.0%
TCAATAGAGGTTGCTTCCTT+GGG + chr7_1:60736570-60736589 None:intergenic 40.0%
ATCAATAGAGGTTGCTTCCT+TGG + chr7_1:60736571-60736590 None:intergenic 40.0%
CTGATCTGGTTGATCAATAG+AGG + chr7_1:60736583-60736602 None:intergenic 40.0%
CTCTATTGATCAACCAGATC+AGG - chr7_1:60736581-60736600 Msa1028130:CDS 40.0%
TTTCACCACAAACACTTGAC+CGG + chr7_1:60736626-60736645 None:intergenic 40.0%
GAATCTTCCTCGAATCCAAA+TGG - chr7_1:60736914-60736933 Msa1028130:intron 40.0%
ATCCAAATGGTTGTATTGCC+GGG - chr7_1:60736927-60736946 Msa1028130:intron 40.0%
! ATGTTCTGAGTGCTTGAATG+AGG - chr7_1:60736997-60737016 Msa1028130:intron 40.0%
! TTGTGATGGAAGAGTGAGAA+GGG + chr7_1:60737194-60737213 None:intergenic 40.0%
! TTTGTGATGGAAGAGTGAGA+AGG + chr7_1:60737195-60737214 None:intergenic 40.0%
GGTATATCGAGTACAGATAC+AGG + chr7_1:60737267-60737286 None:intergenic 40.0%
! AATTTTACCAGGCTGACATG+CGG + chr7_1:60737316-60737335 None:intergenic 40.0%
! TCTAGTGCAGGAATTTTACC+AGG + chr7_1:60737327-60737346 None:intergenic 40.0%
! CCAACTTTTCTCTATCTGCA+GGG + chr7_1:60737411-60737430 None:intergenic 40.0%
! TCCAACTTTTCTCTATCTGC+AGG + chr7_1:60737412-60737431 None:intergenic 40.0%
!!! GCCACTGCAAATTTGTTTTG+AGG - chr7_1:60737528-60737547 Msa1028130:CDS 40.0%
AGATCCTTCGTTGTTTGATC+AGG - chr7_1:60737705-60737724 Msa1028130:five_prime_UTR 40.0%
TCTACCTGATCAAACAACGA+AGG + chr7_1:60737712-60737731 None:intergenic 40.0%
CAAATAGGAGCTTCTGTTCA+TGG + chr7_1:60737756-60737775 None:intergenic 40.0%
TTGTATCAACGAGGTTCTCA+TGG - chr7_1:60737777-60737796 Msa1028130:intron 40.0%
AGGTTCTCATGGAGATTTGT+TGG - chr7_1:60737788-60737807 Msa1028130:intron 40.0%
ATTATTCTCAAGGTCTGGGA+AGG - chr7_1:60737883-60737902 Msa1028130:intron 40.0%
TTCCATCAGTTCTGCAAGAA+TGG + chr7_1:60738043-60738062 None:intergenic 40.0%
! GAGTCTTGTGAGTCAAAGTA+CGG - chr7_1:60738074-60738093 Msa1028130:intron 40.0%
GAATTGAAGGACATCAAGAG+CGG - chr7_1:60738123-60738142 Msa1028130:intron 40.0%
TCTACAAGTTAATGCTGCTC+CGG + chr7_1:60738188-60738207 None:intergenic 40.0%
ACAAGTCCCAAGAGAAAAGT+AGG - chr7_1:60738379-60738398 Msa1028130:five_prime_UTR 40.0%
!! CTAGCTTCCTACTTTTCTCT+TGG + chr7_1:60738389-60738408 None:intergenic 40.0%
AAACATCTTTAGCCCTCACA+GGG + chr7_1:60738493-60738512 None:intergenic 40.0%
!! GATTTGCTGATCACATTACC+TGG - chr7_1:60738535-60738554 Msa1028130:five_prime_UTR 40.0%
CCACACACACTCAATACTAT+AGG + chr7_1:60738613-60738632 None:intergenic 40.0%
! CCTATAGTATTGAGTGTGTG+TGG - chr7_1:60738610-60738629 Msa1028130:five_prime_UTR 40.0%
TGGATGACTGTAGAATGCTT+TGG - chr7_1:60738713-60738732 Msa1028130:five_prime_UTR 40.0%
TTTCCTGTACCTTTCTGCAA+AGG - chr7_1:60738775-60738794 Msa1028130:five_prime_UTR 40.0%
TTCCTGTACCTTTCTGCAAA+GGG - chr7_1:60738776-60738795 Msa1028130:five_prime_UTR 40.0%
ATCTCATTCCCTTTGCAGAA+AGG + chr7_1:60738787-60738806 None:intergenic 40.0%
AAAGGAAAGAGAGAGAGTGG+AGG + chr7_1:60733312-60733331 None:intergenic 45.0%
GGTCAAATATGGACCGGATA+TGG - chr7_1:60734073-60734092 Msa1028130:CDS 45.0%
! GATCAGTCAGGTTGTATGTG+GGG - chr7_1:60734485-60734504 Msa1028130:CDS 45.0%
CACAACAACAAGCATGCTCT+TGG - chr7_1:60734572-60734591 Msa1028130:intron 45.0%
TGTGGCCGTGCTAAACAATT+TGG - chr7_1:60734702-60734721 Msa1028130:intron 45.0%
TCGCAAGAAAAGCCGAGATA+TGG - chr7_1:60735324-60735343 Msa1028130:CDS 45.0%
CAAAGTTGCACTCGGATCAT+TGG + chr7_1:60735353-60735372 None:intergenic 45.0%
CAGGAATTGGAGAATGCTCA+AGG - chr7_1:60735730-60735749 Msa1028130:CDS 45.0%
!! AAGGTCTTGTTCGGTGAAGT+TGG + chr7_1:60735791-60735810 None:intergenic 45.0%
!! TTTTGCATGCTTGTTGGTGC+GGG + chr7_1:60735952-60735971 None:intergenic 45.0%
GGTCCTTCTTCTGTAAGAGT+TGG - chr7_1:60736021-60736040 Msa1028130:CDS 45.0%
! GTTACCAACGGTTTTACCTC+TGG + chr7_1:60736151-60736170 None:intergenic 45.0%
ACGTGAAAGCGGTTCTACTA+AGG - chr7_1:60736296-60736315 Msa1028130:CDS 45.0%
CGTGAAAGCGGTTCTACTAA+GGG - chr7_1:60736297-60736316 Msa1028130:CDS 45.0%
AAGCGGTTCTACTAAGGGAA+AGG - chr7_1:60736302-60736321 Msa1028130:CDS 45.0%
AGCCAGATTCCTAAAACCCT+TGG - chr7_1:60736405-60736424 Msa1028130:CDS 45.0%
!!! TGCCAAGGGTTTTAGGAATC+TGG + chr7_1:60736410-60736429 None:intergenic 45.0%
AGAGGAGAGAAGTTGTACTC+AGG + chr7_1:60736447-60736466 None:intergenic 45.0%
GAGTACAACTTCTCTCCTCT+TGG - chr7_1:60736447-60736466 Msa1028130:CDS 45.0%
TCAACTTTCTCGCATGATCC+TGG - chr7_1:60736684-60736703 Msa1028130:CDS 45.0%
TCAGCAGTATCAACATGACC+AGG + chr7_1:60736705-60736724 None:intergenic 45.0%
CATGTTGATACTGCTGAAGC+CGG - chr7_1:60736708-60736727 Msa1028130:CDS 45.0%
CTCATCTCCAACAGGATAAC+CGG + chr7_1:60736730-60736749 None:intergenic 45.0%
GCAACTATCTCATCTCCAAC+AGG + chr7_1:60736738-60736757 None:intergenic 45.0%
GGAGATGAGATAGTTGCTGA+AGG - chr7_1:60736741-60736760 Msa1028130:CDS 45.0%
AAATGGTTGTATTGCCGGGA+CGG - chr7_1:60736931-60736950 Msa1028130:intron 45.0%
! ATGATTTTGTTGGTCCGTCC+CGG + chr7_1:60736948-60736967 None:intergenic 45.0%
! TGTGATGGAAGAGTGAGAAG+GGG + chr7_1:60737193-60737212 None:intergenic 45.0%
TCGAGTACAGATACAGGACT+TGG + chr7_1:60737261-60737280 None:intergenic 45.0%
ATTCCTGCACTAGAACCTTG+AGG - chr7_1:60737333-60737352 Msa1028130:intron 45.0%
CCCTGCAGATAGAGAAAAGT+TGG - chr7_1:60737408-60737427 Msa1028130:intron 45.0%
CCTCTATCAAATCGATCCAC+TGG + chr7_1:60737568-60737587 None:intergenic 45.0%
!! CCAGTGGATCGATTTGATAG+AGG - chr7_1:60737565-60737584 Msa1028130:CDS 45.0%
TTGATCTTGTGTCAAGCCAG+CGG + chr7_1:60737650-60737669 None:intergenic 45.0%
AGGATCTAGTATCTTGTCCG+AGG + chr7_1:60737692-60737711 None:intergenic 45.0%
TTTGTTCCAAAGTGTGCGGT+GGG + chr7_1:60737936-60737955 None:intergenic 45.0%
ATTTGTTCCAAAGTGTGCGG+TGG + chr7_1:60737937-60737956 None:intergenic 45.0%
ACGAAAGACATGGCGAGAAA+TGG - chr7_1:60737961-60737980 Msa1028130:intron 45.0%
ACATGGCGAGAAATGGAACA+TGG - chr7_1:60737968-60737987 Msa1028130:intron 45.0%
! CTATTTCAGCATCGAGTCGA+AGG + chr7_1:60737999-60738018 None:intergenic 45.0%
CACCATTCTTGCAGAACTGA+TGG - chr7_1:60738038-60738057 Msa1028130:intron 45.0%
TTGCAAGAAGCAAGTGCAAC+TGG + chr7_1:60738412-60738431 None:intergenic 45.0%
TGACATACTTCACCCTGTGA+GGG - chr7_1:60738478-60738497 Msa1028130:five_prime_UTR 45.0%
CAAACATCTTTAGCCCTCAC+AGG + chr7_1:60738494-60738513 None:intergenic 45.0%
! TTCCCTTTGCAGAAAGGTAC+AGG + chr7_1:60738781-60738800 None:intergenic 45.0%
!! TTATATATTTACAAATTATT+TGG + chr7_1:60734676-60734695 None:intergenic 5.0%
GAAAGAGAGAGAGTGGAGGA+AGG + chr7_1:60733308-60733327 None:intergenic 50.0%
TTCGCCATGCTCGCTTTACT+CGG - chr7_1:60734528-60734547 Msa1028130:intron 50.0%
CGATACGCAGACATCACACA+TGG + chr7_1:60734805-60734824 None:intergenic 50.0%
TGATGCTCCAAATTCCCTCC+AGG + chr7_1:60736477-60736496 None:intergenic 50.0%
GCAAACCGGTCAAGTGTTTG+TGG - chr7_1:60736618-60736637 Msa1028130:CDS 50.0%
GTCCCGGCAATACAACCATT+TGG + chr7_1:60736932-60736951 None:intergenic 50.0%
GGAACACGAATCTTCACCAG+TGG - chr7_1:60737549-60737568 Msa1028130:CDS 50.0%
!! ATTACTTTGGGGTCTCGCCT+TGG - chr7_1:60737812-60737831 Msa1028130:intron 50.0%
TTGTTCCAAAGTGTGCGGTG+GGG + chr7_1:60737935-60737954 None:intergenic 50.0%
GGCGAGAAATGGAACATGGA+TGG - chr7_1:60737972-60737991 Msa1028130:intron 50.0%
CTCAGAGGAACATCATGCAC+CGG - chr7_1:60738166-60738185 Msa1028130:five_prime_UTR 50.0%
GTGACATACTTCACCCTGTG+AGG - chr7_1:60738477-60738496 Msa1028130:five_prime_UTR 50.0%
ACCTCCGAGTAAAGCGAGCA+TGG + chr7_1:60734535-60734554 None:intergenic 55.0%
CACGTTCAGCATTGCGTTCG+TGG + chr7_1:60736116-60736135 None:intergenic 55.0%
CGTGAAAACAACGGCTCCAG+AGG - chr7_1:60736132-60736151 Msa1028130:CDS 55.0%
GGCTCCAGAGGTAAAACCGT+TGG - chr7_1:60736144-60736163 Msa1028130:CDS 55.0%
TTCTCTCCTCTTGGGAGTCC+TGG - chr7_1:60736456-60736475 Msa1028130:CDS 55.0%
TGGGAGTCCTGGAGGGAATT+TGG - chr7_1:60736467-60736486 Msa1028130:CDS 55.0%
TGAGGATCACTTGTCGCCCA+AGG - chr7_1:60736551-60736570 Msa1028130:CDS 55.0%
GCTGAAGCCGGTTATCCTGT+TGG - chr7_1:60736720-60736739 Msa1028130:CDS 55.0%
CCAGGGTCATCATCGGAGAA+CGG + chr7_1:60737288-60737307 None:intergenic 55.0%
GGAGTAGCCAGGGTCATCAT+CGG + chr7_1:60737295-60737314 None:intergenic 55.0%
! GGTCCTCAAGGTTCTAGTGC+AGG + chr7_1:60737339-60737358 None:intergenic 55.0%
CTAGAACCTTGAGGACCCTC+TGG - chr7_1:60737342-60737361 Msa1028130:intron 55.0%
ACATAGCCAGAGGGTCCTCA+AGG + chr7_1:60737351-60737370 None:intergenic 55.0%
! AGGTCTGGGAAGGAGTGTGT+TGG - chr7_1:60737893-60737912 Msa1028130:intron 55.0%
TGTTCCAAAGTGTGCGGTGG+GGG + chr7_1:60737934-60737953 None:intergenic 55.0%
GCCATGCTCGCTTTACTCGG+AGG - chr7_1:60734531-60734550 Msa1028130:intron 60.0%
TCTCCTCTTGGGAGTCCTGG+AGG - chr7_1:60736459-60736478 Msa1028130:CDS 60.0%
CTCCTCTTGGGAGTCCTGGA+GGG - chr7_1:60736460-60736479 Msa1028130:CDS 60.0%
TTCCCTCCAGGACTCCCAAG+AGG + chr7_1:60736465-60736484 None:intergenic 60.0%
GGGGACGACAGTGGAGATGA+TGG + chr7_1:60737174-60737193 None:intergenic 60.0%
GAGTGAGAAGGGGACGACAG+TGG + chr7_1:60737183-60737202 None:intergenic 60.0%
CCGTTCTCCGATGATGACCC+TGG - chr7_1:60737285-60737304 Msa1028130:intron 60.0%
GCTGACATGCGGAGTAGCCA+GGG + chr7_1:60737305-60737324 None:intergenic 60.0%
AATGCTGTCATCCACGCCGC+TGG - chr7_1:60737631-60737650 Msa1028130:five_prime_UTR 60.0%
AAAGTGTGCGGTGGGGGCAA+AGG + chr7_1:60737928-60737947 None:intergenic 60.0%
TTTGCCCCCACCGCACACTT+TGG - chr7_1:60737927-60737946 Msa1028130:intron 60.0%
GGCTGACATGCGGAGTAGCC+AGG + chr7_1:60737306-60737325 None:intergenic 65.0%
GGCTACTCCGCATGTCAGCC+TGG - chr7_1:60737306-60737325 Msa1028130:intron 65.0%
CTTGTGTCAAGCCAGCGGCG+TGG + chr7_1:60737645-60737664 None:intergenic 65.0%
TGTGCGGTGGGGGCAAAGGA+AGG + chr7_1:60737924-60737943 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 60733221 60738831 60733221 ID=Msa1028130;Name=Msa1028130
chr7_1 mRNA 60733221 60738831 60733221 ID=Msa1028130-mRNA-1;Parent=Msa1028130;Name=Msa1028130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=836|1|1|1|0.83|0.71|7|727|912
chr7_1 exon 60733221 60734540 60733221 ID=Msa1028130-mRNA-1:exon:12687;Parent=Msa1028130-mRNA-1
chr7_1 exon 60734725 60734902 60734725 ID=Msa1028130-mRNA-1:exon:12686;Parent=Msa1028130-mRNA-1
chr7_1 exon 60735034 60735173 60735034 ID=Msa1028130-mRNA-1:exon:12685;Parent=Msa1028130-mRNA-1
chr7_1 exon 60735290 60736898 60735290 ID=Msa1028130-mRNA-1:exon:12684;Parent=Msa1028130-mRNA-1
chr7_1 exon 60737068 60737135 60737068 ID=Msa1028130-mRNA-1:exon:12683;Parent=Msa1028130-mRNA-1
chr7_1 exon 60737459 60737745 60737459 ID=Msa1028130-mRNA-1:exon:12682;Parent=Msa1028130-mRNA-1
chr7_1 exon 60738132 60738831 60738132 ID=Msa1028130-mRNA-1:exon:12681;Parent=Msa1028130-mRNA-1
chr7_1 five_prime_UTR 60738132 60738831 60738132 ID=Msa1028130-mRNA-1:five_prime_utr;Parent=Msa1028130-mRNA-1
chr7_1 five_prime_UTR 60737610 60737745 60737610 ID=Msa1028130-mRNA-1:five_prime_utr;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60737459 60737609 60737459 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60737068 60737135 60737068 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60735290 60736898 60735290 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60735034 60735173 60735034 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60734725 60734902 60734725 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 CDS 60733948 60734540 60733948 ID=Msa1028130-mRNA-1:cds;Parent=Msa1028130-mRNA-1
chr7_1 three_prime_UTR 60733221 60733947 60733221 ID=Msa1028130-mRNA-1:three_prime_utr;Parent=Msa1028130-mRNA-1
Gene Sequence

>Msa1028130

ATGGCAAAGAGGTCTCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGCCATGCTCGCTTTACTCGGAGGTTGATTGCTGATAAGAGACACAACAACAAGCATGCTCTTGGGGCTGTACTTACCAAGAACAAGTTTGAGGCATTGAGTAATTTGGATGAAGAATATCAAGACAATTTGGACAGAGGAGAGAGTAAGAGACTAACAGTTGCAATTGATGCTGAGAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGACCAGGATGAAATAAAGAATCAAGGTACCGATTTAGGGTCTGAAGATTCCCTGAAGACAGATTCGAAAAGAAAAAGAAAATCTCGCAAGAAAAGCCGAGATATGGACACCAATGATCCGAGTGCAACTTTGAAATCAGAATTCTCACATAATCAGCACTCAAACCAACAATCAAAAGATAATATTGATTTGGACAAGATAATGGAAGATTTTTGTCAAATTGAACGTGCTTGCTCCTTGATGCATGACGACGATAATAGCAAAATTCACGATCAATCAAACCAAAAGAATGTCAGTTCTGAAGAGCTTGCAAGAGATGCAATTCATGATTTTGTGAATCAAAAGATATTGAATGGGAAAGATATGGTAGAGGATAAAAAATTCCTTTGTTCAAATGAACTAATGGAAACACTTCAGGTTATAAGCTCGGATAAGGAATTGTTTCTAAAACTTCTACAAGATCCAAATTCACATTTACTGAAATATATTCAGGAATTGGAGAATGCTCAAGGGAAAACTGAAAAAGAGTACAATTCTGTTGCTAATTCCAACTTCACCGAACAAGACCTTCGCAATCTAAAACAAACTAGGGAGATTGTCGGCCGCAAGCATCGTAAATTTTTCTGGAAAAAGGTAAAGTCTCCATCGAAAGTTCCAACAAATAAAAATGCAGAAACTGAGGTTCCAAATAGAATTGTCATTCTGAAACCCGCACCAACAAGCATGCAAAATTCAAAAAGTGAAAGCAATGTTGATTCTCGTGATATTGTCCATTACAAAGGTCCTTCTTCTGTAAGAGTTGGTTCACATTTTTCCCTTACAGAGATAAAAAGGAAATTAAAACATGTTATAGGAAAGGAGAAGCATGGAAACCACGAACGCAATGCTGAACGTGAAAACAACGGCTCCAGAGGTAAAACCGTTGGTAACGATAAATTTGAAATGAGATCTCCTAATAAAGACCGTTTCTTCACTGAAAAAATTGCAAGGCCTATGTTTGATGTTGTAAAAGGAGACAAGACTGGTACAATGAAAGACTCCAAATTTAATTCAGAACGTGAAAGCGGTTCTACTAAGGGAAAGGTTTCAAACATATACGTTGAGGCAAAGAAACATTTATCTGAGATGCTAGATAATGGAGATGATAACACGGGCATTTCTAGCAGCCAGATTCCTAAAACCCTTGGCAGAATACTATCTCTTCCTGAGTACAACTTCTCTCCTCTTGGGAGTCCTGGAGGGAATTTGGAGCATCATCTTGTGACTGCACATTCAAGACTTTCATCTTCAGATAAAACTTTGGATGATAATGAGGATCACTTGTCGCCCAAGGAAGCAACCTCTATTGATCAACCAGATCAGGAAACTAGTAATTCAGCAAACCGGTCAAGTGTTTGTGGTGAAAATGAAAGATCTAATGAAGTACTAGAAATCGAGTCAGAGTCAACTTTCTCGCATGATCCTGGTCATGTTGATACTGCTGAAGCCGGTTATCCTGTTGGAGATGAGATAGTTGCTGAAGGTAATGTAGAATTCACAAAAGATATAAATGTTTTGGAATCTTCCTCGAATCCAAATGGTTGTATTGCCGGGACGGACCAACAAAATCATGATATTGCAGAAATTCATGATGATGGTAGATGTTCTGAGTGCTTGAATGAGGATGTAAAAGAAGAGAATCAACCATCATCTCCACTGTCGTCCCCTTCTCACTCTTCCATCACAAATAAAACTGAAGAGCTAGAAAGTAGTACAGATGTATCTGGTCGACCAAGTCCTGTATCTGTACTCGATATACCGTTCTCCGATGATGACCCTGGCTACTCCGCATGTCAGCCTGTTAAACTGCGAGTACAGCCACTGCAAATTTGTTTTGAGGAACACGAATCTTCACCAGTGGATCGATTTGATAGAGGAAAATGTTGTTTTGAACAAAATGAATTGATACATGAGTACATAAATGCTGTCATCCACGCCGCTGGCTTGACACAAGATCAACTATTGATGAAATGTCTTTCCTCGGACAAGATACTAGATCCTTCGTTGTTTGATCAGGTAGAGTTCTTCTCAAACATGCTTTGCCATGAACAGAAGCTCCTATTTGATTGTATCAACGAGGTTCTCATGGAGATTTGTTGGCATTACTTTGGGGTCTCGCCTTGGCTATCATTTGTAAACTCTAGTATAAGGCCAACTCCAAATATGAAAAAGATTATTCTCAAGGTCTGGGAAGGAGTGTGTTGGCATGTCCTTCCTTTGCCCCCACCGCACACTTTGGAACAAATTGTCACGAAAGACATGGCGAGAAATGGAACATGGATGGACCTTCGACTCGATGCTGAAATAGTTAGTTTTGAAATGGGTGACACCATTCTTGCAGAACTGATGGAAGATACAATATTGAGTCTTGTGAGTCAAAGTACGGTAAGTTAA
Protein sequence

>Msa1028130

MAKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRRLIADKRHNNKHALGAVLTKNKFEALSNLDEEYQDNLDRGESKRLTVAIDAEKLSVKKLIEEEMFIDQDEIKNQGTDLGSEDSLKTDSKRKRKSRKKSRDMDTNDPSATLKSEFSHNQHSNQQSKDNIDLDKIMEDFCQIERACSLMHDDDNSKIHDQSNQKNVSSEELARDAIHDFVNQKILNGKDMVEDKKFLCSNELMETLQVISSDKELFLKLLQDPNSHLLKYIQELENAQGKTEKEYNSVANSNFTEQDLRNLKQTREIVGRKHRKFFWKKVKSPSKVPTNKNAETEVPNRIVILKPAPTSMQNSKSESNVDSRDIVHYKGPSSVRVGSHFSLTEIKRKLKHVIGKEKHGNHERNAERENNGSRGKTVGNDKFEMRSPNKDRFFTEKIARPMFDVVKGDKTGTMKDSKFNSERESGSTKGKVSNIYVEAKKHLSEMLDNGDDNTGISSSQIPKTLGRILSLPEYNFSPLGSPGGNLEHHLVTAHSRLSSSDKTLDDNEDHLSPKEATSIDQPDQETSNSANRSSVCGENERSNEVLEIESESTFSHDPGHVDTAEAGYPVGDEIVAEGNVEFTKDINVLESSSNPNGCIAGTDQQNHDIAEIHDDGRCSECLNEDVKEENQPSSPLSSPSHSSITNKTEELESSTDVSGRPSPVSVLDIPFSDDDPGYSACQPVKLRVQPLQICFEEHESSPVDRFDRGKCCFEQNELIHEYINAVIHAAGLTQDQLLMKCLSSDKILDPSLFDQVEFFSNMLCHEQKLLFDCINEVLMEICWHYFGVSPWLSFVNSSIRPTPNMKKIILKVWEGVCWHVLPLPPPHTLEQIVTKDMARNGTWMDLRLDAEIVSFEMGDTILAELMEDTILSLVSQSTVS*