AlfalfaGEDB | Msa1029610

M. sativa cultivar zhongmu-4 / Msa1029610

KEGG: K02147
GO: GO:0001678 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0008064 GO:0008092 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0019219 GO:0019222 GO:0019725 GO:0022607 GO:0023052 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031090 GO:0031323 GO:0031326 GO:0031333 GO:0032271 GO:0032272 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046686 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051493 GO:0051494 GO:0051693 GO:0051716 GO:0055044 GO:0055082 GO:0060255 GO:0061572 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0097435 GO:0098588 GO:0098805 GO:0110053 GO:1901700 GO:1901701 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02874.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1029610	XP_003624258.1	100.000	487	0	0	1	487	1	487	0.0	999

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1029610	sp\|Q9SZN1\|VATB2_ARATH	97.125	487	14	0	1	487	1	487	0.0	971

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1029610	G7KSI7	100.000	487	0	0	1	487	1	487	0.0	999

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1029610	Msa1068500	0.972331	1.363294e-134	-8.615850e-47
Msa1029610	Msa1156550	0.964604	1.547382e-123	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1029610	MtrunA17_Chr7g0250051	100.000	487	0	0	1	487	1	487	0.0	999
Msa1029610	MtrunA17_Chr1g0211291	98.364	489	6	2	1	487	1	489	0.0	978
Msa1029610	MtrunA17_Chr1g0208751	28.926	363	228	9	88	442	153	493	8.91e-29	119
Msa1029610	MtrunA17_Chr4g0015651	30.132	302	192	5	83	382	87	371	4.69e-28	117
Msa1029610	MtrunA17_Chr4g0016741	30.132	302	192	5	83	382	87	371	4.69e-28	117
Msa1029610	MtrunA17_CPg0492941	30.132	302	192	5	83	382	87	371	4.69e-28	117
Msa1029610	MtrunA17_Chr1g0208761	28.713	404	251	13	51	442	118	496	8.63e-28	116
Msa1029610	MtrunA17_Chr3g0090971	28.533	368	222	9	88	442	94	433	3.99e-26	111
Msa1029610	MtrunA17_Chr4g0016371	28.261	368	223	9	88	442	55	394	1.81e-25	108
Msa1029610	MtrunA17_CPg0493401	28.261	368	223	9	88	442	94	433	3.01e-25	108
Msa1029610	MtrunA17_Chr7g0229391	28.261	368	223	10	88	442	94	433	1.28e-24	106
Msa1029610	MtrunA17_MTg0490471	26.444	329	231	4	56	382	62	381	1.49e-24	106
Msa1029610	MtrunA17_Chr4g0000341	28.936	235	158	4	224	451	303	535	2.98e-21	97.1
Msa1029610	MtrunA17_Chr2g0278821	27.000	200	118	4	242	439	11	184	1.79e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1029610	AT4G38510.5	97.125	487	14	0	1	487	8	494	0.0	971
Msa1029610	AT4G38510.1	97.125	487	14	0	1	487	1	487	0.0	971
Msa1029610	AT4G38510.3	97.125	487	14	0	1	487	1	487	0.0	971
Msa1029610	AT4G38510.4	97.125	487	14	0	1	487	1	487	0.0	971
Msa1029610	AT4G38510.2	97.125	487	14	0	1	487	1	487	0.0	971
Msa1029610	AT1G76030.1	96.653	478	16	0	10	487	9	486	0.0	950
Msa1029610	AT1G20260.1	96.451	479	16	1	10	487	9	487	0.0	949
Msa1029610	AT5G08670.1	29.040	396	246	12	59	442	121	493	1.91e-28	119
Msa1029610	AT5G08690.1	29.040	396	246	12	59	442	121	493	2.04e-28	119
Msa1029610	AT5G08680.1	29.040	396	246	12	59	442	124	496	3.11e-28	118
Msa1029610	ATCG00120.1	27.606	355	213	6	83	435	87	399	4.38e-28	117
Msa1029610	ATMG01190.1	27.356	329	228	4	56	382	62	381	3.90e-27	114
Msa1029610	AT2G07698.1	27.083	336	234	4	56	389	332	658	1.80e-26	114
Msa1029610	ATCG00480.1	28.969	359	230	7	89	442	95	433	7.81e-26	110
Msa1029610	AT1G78900.1	28.936	235	158	4	224	451	302	534	1.98e-21	98.2
Msa1029610	AT1G78900.2	28.936	235	158	4	224	451	302	534	1.98e-21	98.2

Find 186 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTGGTCACTCTATTAATTT+TGG	0.162373	7_1:+63090172	Msa1029610:three_prime_UTR
TCTTACCACTGCTGAATATT+TGG	0.162858	7_1:+63088076	Msa1029610:CDS
ACAGCTGTATCTGGAATTTC+TGG	0.176815	7_1:+63089690	Msa1029610:intron
GATATTGGTTGATATCAATT+TGG	0.194955	7_1:+63090047	Msa1029610:three_prime_UTR
TTCACAACTGTGCAATTTAC+TGG	0.215066	7_1:+63085448	Msa1029610:CDS
AGAGGATGAGTGGTTATTTC+TGG	0.218148	7_1:-63090490	None:intergenic
GCAGAGTACAGAACTGTTTC+TGG	0.220711	7_1:+63084844	Msa1029610:intron
CACAACAAATAAAATATCTA+TGG	0.238227	7_1:-63090000	None:intergenic
TCAATTTGGGATAGTGTTAA+TGG	0.241918	7_1:+63090061	Msa1029610:three_prime_UTR
CATATTACCTGAGGCTTACT+TGG	0.249090	7_1:+63086427	Msa1029610:CDS
CAAGTAAGCCTCAGGTAATA+TGG	0.262623	7_1:-63086426	None:intergenic
TTCTAAACATTACCAGATTA+AGG	0.278430	7_1:-63087677	None:intergenic
ATCTGTTAGAGACAAATAAT+TGG	0.279572	7_1:+63084450	None:intergenic
TCCTGGGGTGGTGAGGATAT+TGG	0.284964	7_1:+63090032	Msa1029610:three_prime_UTR
GGCCGCATCTTTAACGGTTC+AGG	0.293721	7_1:+63086380	Msa1029610:CDS
CTAGAGATTGGAAGATGTTT+CGG	0.309106	7_1:-63089756	None:intergenic
CTCTATGCAAATTATGCTAT+TGG	0.310407	7_1:+63089511	Msa1029610:CDS
CTTTCTTCAAGTTCCTGAAA+TGG	0.312808	7_1:+63084623	Msa1029610:exon
TGGAAGGTCCGATGAGGTGG+TGG	0.316564	7_1:-63090535	None:intergenic
AGAACTGTTTCTGGGGTTGC+TGG	0.318455	7_1:+63084853	Msa1029610:CDS
TGTGCTGAATAGAAGAAATA+AGG	0.329907	7_1:-63089909	None:intergenic
ATATTGGTTGATATCAATTT+GGG	0.330619	7_1:+63090048	Msa1029610:three_prime_UTR
CATCCAACTCCTGATCTTAC+TGG	0.336093	7_1:+63088553	Msa1029610:CDS
TAATTGGGCTATTTCCTTGA+TGG	0.336795	7_1:+63084466	Msa1029610:five_prime_UTR
TAGAGATTGGAAGATGTTTC+GGG	0.337191	7_1:-63089755	None:intergenic
TCTGTGCAGCAATTTCATTA+TGG	0.339333	7_1:-63086664	None:intergenic
ATCAAGAGATCGTTAATATT+CGG	0.350123	7_1:+63085069	Msa1029610:CDS
CTGTGCAGCAATTTCATTAT+GGG	0.352240	7_1:-63086663	None:intergenic
TCATTAGGCATGGTTAGAAT+TGG	0.354202	7_1:-63088430	None:intergenic
CCCGTCTGAATCATCTCTTC+TGG	0.356441	7_1:-63086566	None:intergenic
GTCTACCAGGCACTTCTTCT+CGG	0.362815	7_1:-63088315	None:intergenic
TTTCTTCAAGTTCCTGAAAT+GGG	0.366564	7_1:+63084624	Msa1029610:exon
TGCTATTGGAAAGGATGTTC+AGG	0.372132	7_1:+63089525	Msa1029610:CDS
TAAGGAACATAATATTATTA+TGG	0.373377	7_1:+63090457	Msa1029610:three_prime_UTR
GAAGGTCCGATGAGGTGGTG+GGG	0.377349	7_1:-63090533	None:intergenic
TGCTATTGTGTTTGCAGCCA+TGG	0.386782	7_1:+63087578	Msa1029610:CDS
TTGGATCATTGGATTATGTA+AGG	0.392532	7_1:+63090439	Msa1029610:three_prime_UTR
GAAGATGTTTCGGGTATCAT+AGG	0.392980	7_1:-63089746	None:intergenic
TCTGGATAGGTTCTCTCACT+AGG	0.397824	7_1:-63086548	None:intergenic
GAGGCTTACTTGGACATATC+AGG	0.401749	7_1:+63086437	Msa1029610:CDS
GCGAAATATTCAGTGCAGTT+AGG	0.403363	7_1:+63090088	Msa1029610:three_prime_UTR
AAGATCTGTATACATGTAAC+CGG	0.405718	7_1:-63088347	None:intergenic
ATCTTGCATGGACTTTGCTT+CGG	0.407472	7_1:+63089779	Msa1029610:CDS
GATGTCCAATCATAGACATT+AGG	0.415149	7_1:-63090291	None:intergenic
CTTTGAAGAGAATGGCTCTA+TGG	0.416665	7_1:+63087638	Msa1029610:CDS
TTCTGGGGTTGCTGGACCAT+TGG	0.419788	7_1:+63084861	Msa1029610:CDS
TTAACGATCTCTTGATACTT+AGG	0.424939	7_1:-63085062	None:intergenic
AAACGTGACTTTGAAGAGAA+TGG	0.425051	7_1:+63087630	Msa1029610:CDS
ATGCTTGGCCGCATCTTTAA+CGG	0.425385	7_1:+63086374	Msa1029610:CDS
GAAGATGGAACCTTGGAAAT+CGG	0.428343	7_1:+63084669	Msa1029610:CDS
CCAAGCATGTCCAGTGATAC+AGG	0.429003	7_1:-63086359	None:intergenic
TGTCTCTGCAGAGTGCCATT+GGG	0.431279	7_1:+63089360	Msa1029610:intron
TTACTGAGAATATTATAATC+AGG	0.436959	7_1:+63090139	Msa1029610:three_prime_UTR
ACATTACCAGATTAAGGAAA+AGG	0.442700	7_1:-63087671	None:intergenic
ATGGGTGGACCATTGTCAAT+TGG	0.444251	7_1:-63086407	None:intergenic
CAGAGTACAGAACTGTTTCT+GGG	0.446797	7_1:+63084845	Msa1029610:intron
ATTCAAGGTGAGGTTTAGCT+TGG	0.447313	7_1:+63090380	Msa1029610:three_prime_UTR
TAATCAGGACAGTTATTTGT+TGG	0.447789	7_1:+63090154	Msa1029610:three_prime_UTR
AATATTTCATCACCATCATT+AGG	0.448287	7_1:-63088445	None:intergenic
CGGCGGAAGGTCACGGTGGA+AGG	0.448970	7_1:-63090551	None:intergenic
GAGATCGTTAATATTCGGTT+AGG	0.452408	7_1:+63085074	Msa1029610:CDS
AAAGTCTATTCAAGATCCAT+TGG	0.454038	7_1:-63090327	None:intergenic
CACCACCTAATGTCTATGAT+TGG	0.457895	7_1:+63090286	Msa1029610:three_prime_UTR
TCCATGCAAGATCTAGAGAT+TGG	0.465346	7_1:-63089768	None:intergenic
TAGGAGGAAGATGATAATAG+AGG	0.468870	7_1:-63090508	None:intergenic
GTCTTCACTCTGACTATATG+AGG	0.469683	7_1:-63089977	None:intergenic
TGCTGCACAGATATGTCGCC+AGG	0.470538	7_1:+63086676	Msa1029610:CDS
AGAGATGGAAGGACATTGAT+TGG	0.471634	7_1:-63089081	None:intergenic
GGAAGGTCCGATGAGGTGGT+GGG	0.472285	7_1:-63090534	None:intergenic
GTTAATATTCGGTTAGGAGA+TGG	0.472492	7_1:+63085080	Msa1029610:CDS
CAAAATGCTCATGATGAAGA+TGG	0.473173	7_1:+63084654	Msa1029610:CDS
TCTGTTAGAGACAAATAATT+GGG	0.473773	7_1:+63084451	None:intergenic
ACCAATATCCTCACCACCCC+AGG	0.475266	7_1:-63090033	None:intergenic
ACATATGTTACATATAATAA+AGG	0.475516	7_1:+63089929	Msa1029610:three_prime_UTR
TTCAAGGTGAGGTTTAGCTT+GGG	0.476907	7_1:+63090381	Msa1029610:three_prime_UTR
TAGAATTGGAATTTGCGTAA+TGG	0.477458	7_1:-63088416	None:intergenic
AGGGGCAGATATATATTGAT+AGG	0.478609	7_1:+63088587	Msa1029610:CDS
TTTAGATTGAGTCTAATTCA+AGG	0.483112	7_1:+63090365	Msa1029610:three_prime_UTR
AGCACTTTCGTCCGAGGACC+TGG	0.484946	7_1:+63089573	Msa1029610:CDS
TACTGATCGAGAGTCTTTGC+CGG	0.488525	7_1:-63089832	None:intergenic
GCTATTGTGTTTGCAGCCAT+GGG	0.490453	7_1:+63087579	Msa1029610:CDS
TCTACCAGGCACTTCTTCTC+GGG	0.491546	7_1:-63088314	None:intergenic
CATTACCAGATTAAGGAAAA+GGG	0.495678	7_1:-63087670	None:intergenic
ATAGAAGAAATAAGGACTGT+TGG	0.498907	7_1:-63089901	None:intergenic
TTGTCTCTGCAGAGTGCCAT+TGG	0.499718	7_1:+63089359	Msa1029610:intron
GGACAAGTTCTAGAAGTTGA+TGG	0.502229	7_1:+63085116	Msa1029610:CDS
GTGATATATCCAGTAAGATC+AGG	0.505168	7_1:-63088562	None:intergenic
CTGAATCATCTCTTCTGGAT+AGG	0.505688	7_1:-63086561	None:intergenic
AAGTAAGCCTCAGGTAATAT+GGG	0.512911	7_1:-63086425	None:intergenic
GAGCGTGCTGGAAGAATTGA+GGG	0.513971	7_1:+63088382	Msa1029610:CDS
GTGTGCAACTGTAGCATCAG+AGG	0.514199	7_1:-63090583	None:intergenic
TGCAGCCATGGGAGTTAACA+TGG	0.514564	7_1:+63087590	Msa1029610:CDS
GTGATGATACGCTCAATTGT+AGG	0.514630	7_1:-63088041	None:intergenic
AAGGTCCGATGAGGTGGTGG+GGG	0.515053	7_1:-63090532	None:intergenic
GAGACGGCGGCGGAAGGTCA+CGG	0.515451	7_1:-63090558	None:intergenic
CGTAAAATTTATGACCTGGT+TGG	0.517352	7_1:-63089417	None:intergenic
CTGGATAGGTTCTCTCACTA+GGG	0.520704	7_1:-63086547	None:intergenic
CCGGGATAACCACGTCTACC+AGG	0.521580	7_1:-63088328	None:intergenic
ATCTCTGTCTCGATTAATGA+AGG	0.521975	7_1:+63089098	Msa1029610:CDS
GAGAGGAAGTTCGTCGCTCA+AGG	0.524033	7_1:+63089721	Msa1029610:CDS
AGACCAGCAGCTGAGAAAAG+AGG	0.524273	7_1:-63086638	None:intergenic
TCAGATCAATCATTCTGTGA+AGG	0.524721	7_1:+63084597	Msa1029610:five_prime_UTR
GGAACCTTGGAAATCGGAAT+GGG	0.529742	7_1:+63084675	Msa1029610:CDS
TGAGCGTGCTGGAAGAATTG+AGG	0.534631	7_1:+63088381	Msa1029610:CDS
GCACAGATATGTCGCCAGGC+TGG	0.535224	7_1:+63086680	Msa1029610:CDS
CAGATCAATCATTCTGTGAA+GGG	0.535698	7_1:+63084598	Msa1029610:five_prime_UTR
TTCATCACCATCATTAGGCA+TGG	0.537083	7_1:-63088440	None:intergenic
CCTGTATCACTGGACATGCT+TGG	0.538547	7_1:+63086359	Msa1029610:CDS
TCCAATCTCTAGATCTTGCA+TGG	0.539339	7_1:+63089767	Msa1029610:CDS
TGGAACCTTGGAAATCGGAA+TGG	0.541679	7_1:+63084674	Msa1029610:CDS
ATTCTAACCATGCCTAATGA+TGG	0.544479	7_1:+63088433	Msa1029610:CDS
GACCAGCAGCTGAGAAAAGA+GGG	0.547293	7_1:-63086637	None:intergenic
CTGCAGAGTGCCATTGGGGA+GGG	0.548728	7_1:+63089365	Msa1029610:intron
CTGACCCATTCCGATTTCCA+AGG	0.550920	7_1:-63084679	None:intergenic
AGTCTCCATGTTAACTCCCA+TGG	0.551610	7_1:-63087595	None:intergenic
GGAAGAATTGAGGGTCGAAA+AGG	0.552744	7_1:+63088391	Msa1029610:CDS
CGGTGGAAGGTCCGATGAGG+TGG	0.553272	7_1:-63090538	None:intergenic
TAGGCAGTTGCACAACAGAC+AGG	0.555318	7_1:+63088606	Msa1029610:CDS
ACAACAAATAAAATATCTAT+GGG	0.555457	7_1:-63089999	None:intergenic
CCTGGTAGACGTGGTTATCC+CGG	0.555546	7_1:+63088328	Msa1029610:CDS
ATCTAGAGCATGGCATCCAA+TGG	0.559645	7_1:+63090311	Msa1029610:three_prime_UTR
AACAAATGCACGAACCATCA+AGG	0.560996	7_1:-63084480	None:intergenic
GTCTCTGCAGAGTGCCATTG+GGG	0.561874	7_1:+63089361	Msa1029610:intron
GAGGAAGAGACGGCGGCGGA+AGG	0.562291	7_1:-63090564	None:intergenic
GATATGTCCAAGTAAGCCTC+AGG	0.565460	7_1:-63086434	None:intergenic
GGAGCTTCTTCATCGTATAC+CGG	0.567842	7_1:+63089813	Msa1029610:CDS
AGACATTAGGTGGTGTGTTG+AGG	0.571601	7_1:-63090278	None:intergenic
AGATGATAATAGAGGATGAG+TGG	0.571879	7_1:-63090500	None:intergenic
GGTGAGGTTTAGCTTGGGAA+AGG	0.572599	7_1:+63090386	Msa1029610:three_prime_UTR
TTCCTGAACCGTTAAAGATG+CGG	0.576286	7_1:-63086382	None:intergenic
TGCAAATTATGCTATTGGAA+AGG	0.576810	7_1:+63089516	Msa1029610:CDS
TGTGCAGCAATTTCATTATG+GGG	0.578028	7_1:-63086662	None:intergenic
TGAATCAATTGCTAGCATCT+CGG	0.580384	7_1:-63089861	None:intergenic
ATTGAGTCTAATTCAAGGTG+AGG	0.581346	7_1:+63090370	Msa1029610:three_prime_UTR
TCGTGTCATTCCCTCCCCAA+TGG	0.581388	7_1:-63089375	None:intergenic
AAGTGCTTCTTCTCCGACCA+CGG	0.585237	7_1:-63089557	None:intergenic
TTCATTAATCGAGACAGAGA+TGG	0.586188	7_1:-63089096	None:intergenic
GCTGCCCGAGAAGAAGTGCC+TGG	0.587387	7_1:+63088310	Msa1029610:CDS
TCACTCTGATGTGTCCAACC+AGG	0.587973	7_1:+63089403	Msa1029610:CDS
TTCTCAGTAATCAAATTACA+AGG	0.588350	7_1:-63090126	None:intergenic
AATATTAGAGACCAGGTCCT+CGG	0.589790	7_1:-63089584	None:intergenic
TCTGCAGAGTGCCATTGGGG+AGG	0.595305	7_1:+63089364	Msa1029610:intron
AACTGTGCAATTTACTGGAG+AGG	0.598296	7_1:+63085453	Msa1029610:CDS
TCCAGAAGAGATGATTCAGA+CGG	0.603110	7_1:+63086565	Msa1029610:CDS
ATCAATATATATCTGCCCCT+CGG	0.604130	7_1:-63088584	None:intergenic
GTCCAATCATAGACATTAGG+TGG	0.605174	7_1:-63090288	None:intergenic
TATCCAGTAAGATCAGGAGT+TGG	0.605304	7_1:-63088556	None:intergenic
GCAACAATATATGAGCGTGC+TGG	0.605327	7_1:+63088370	Msa1029610:CDS
AATTTCTGGACAAGTTTGAG+AGG	0.606081	7_1:+63089704	Msa1029610:CDS
GATGGAAGGACATTGATTGG+TGG	0.609851	7_1:-63089078	None:intergenic
ATGATTGGACATCTAGAGCA+TGG	0.610515	7_1:+63090301	Msa1029610:three_prime_UTR
ATCAGAGGAAGAGACGGCGG+CGG	0.610520	7_1:-63090568	None:intergenic
CCAGAAGAGATGATTCAGAC+GGG	0.612035	7_1:+63086566	Msa1029610:CDS
GTCATGAATTCTATTGCTAG+AGG	0.614243	7_1:+63086605	Msa1029610:CDS
AGAAGAAGCACTTTCGTCCG+AGG	0.614562	7_1:+63089567	Msa1029610:CDS
CTTACTGGATATATCACCGA+GGG	0.620091	7_1:+63088568	Msa1029610:CDS
TTATGCTGATGCTCTTCGTG+AGG	0.621125	7_1:+63088148	Msa1029610:CDS
GGAGATGGAACGACTAGGCG+TGG	0.624010	7_1:+63085095	Msa1029610:CDS
CAGGCAATGAAAGCCGTGGT+CGG	0.631672	7_1:+63089544	Msa1029610:CDS
GTGCAGCAATTTCATTATGG+GGG	0.632413	7_1:-63086661	None:intergenic
TGGGGAGGGAATGACACGAA+GGG	0.639839	7_1:+63089379	Msa1029610:CDS
TGTAGCATCAGAGGAAGAGA+CGG	0.640967	7_1:-63090574	None:intergenic
GAAGAAGTGCCTGGTAGACG+TGG	0.643571	7_1:+63088319	Msa1029610:CDS
TCATGATGAAGATGGAACCT+TGG	0.648775	7_1:+63084662	Msa1029610:CDS
TAAGCCTCAGGTAATATGGG+TGG	0.650453	7_1:-63086422	None:intergenic
ATACGATGAAGAAGCTCCCG+AGG	0.650620	7_1:-63089808	None:intergenic
TTGGGGAGGGAATGACACGA+AGG	0.651308	7_1:+63089378	Msa1029610:CDS
GGTTAGGAGATGGAACGACT+AGG	0.656080	7_1:+63085090	Msa1029610:CDS
GAAATCTGACAACCTTCTCG+AGG	0.665916	7_1:+63086721	Msa1029610:CDS
ACATCCGCAATACCTCGAGA+AGG	0.666067	7_1:-63086733	None:intergenic
TCAGGAAAACCAATTGACAA+TGG	0.671861	7_1:+63086398	Msa1029610:CDS
TGTTCAGGCAATGAAAGCCG+TGG	0.675475	7_1:+63089540	Msa1029610:CDS
AGATCTGTATACATGTAACC+GGG	0.675732	7_1:-63088346	None:intergenic
ATATGCCAAATATTCAGCAG+TGG	0.678847	7_1:-63088081	None:intergenic
TCACGGTGGAAGGTCCGATG+AGG	0.679690	7_1:-63090541	None:intergenic
TTAATCGAGACAGAGATGGA+AGG	0.679739	7_1:-63089092	None:intergenic
TACGATGAAGAAGCTCCCGA+GGG	0.680391	7_1:-63089807	None:intergenic
ACATATAATAAAGGTCTGAG+TGG	0.686493	7_1:+63089938	Msa1029610:three_prime_UTR
GAATATTTGGCATATGAATG+CGG	0.689340	7_1:+63088089	Msa1029610:CDS
AGAGTACAGAACTGTTTCTG+GGG	0.692271	7_1:+63084846	Msa1029610:intron
TGGTCCACCCATATTACCTG+AGG	0.695560	7_1:+63086418	Msa1029610:CDS
ACGGCGGCGGAAGGTCACGG+TGG	0.709656	7_1:-63090555	None:intergenic
AGCATCAGAGGAAGAGACGG+CGG	0.713885	7_1:-63090571	None:intergenic
GCAGTGGTAAGAGCAATACG+AGG	0.742645	7_1:-63088065	None:intergenic
TCTTACTGGATATATCACCG+AGG	0.765825	7_1:+63088567	Msa1029610:CDS
TTACTGGATATATCACCGAG+GGG	0.780775	7_1:+63088569	Msa1029610:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACTGAAATTAAAATATTAAT+TGG	+	chr7_1:63087298-63087317	Msa1029610:intron	10.0%
!!!	AAAAGATAGTTTATAATTTT+TGG	+	chr7_1:63087321-63087340	Msa1029610:intron	10.0%
!!	TTCAATTAAAAGTTATATTA+TGG	+	chr7_1:63089309-63089328	Msa1029610:intron	10.0%
!!	TCAATTAAAAGTTATATTAT+GGG	+	chr7_1:63089310-63089329	Msa1029610:intron	10.0%
!!	ATATATATATATATAGAGCT+AGG	-	chr7_1:63085179-63085198	None:intergenic	15.0%
!!!	CATAGAATTCTTATAAATTT+TGG	-	chr7_1:63085270-63085289	None:intergenic	15.0%
!!	ATATAAAGACAAACAAAATA+AGG	-	chr7_1:63086840-63086859	None:intergenic	15.0%
!!	TTACAAATATGTAAATATGT+CGG	-	chr7_1:63087784-63087803	None:intergenic	15.0%
!!!	TTTCTAAAAATTATAGTTGA+AGG	-	chr7_1:63088181-63088200	None:intergenic	15.0%
!!!	TTTTTATTTTTAGCTAAAGT+AGG	+	chr7_1:63089276-63089295	Msa1029610:intron	15.0%
!!	ATAAACAAAAATATCCTTAA+AGG	-	chr7_1:63089612-63089631	None:intergenic	15.0%
!!	TAATTAATACCATTATTTCA+AGG	-	chr7_1:63089649-63089668	None:intergenic	15.0%
!!	ACATATGTTACATATAATAA+AGG	+	chr7_1:63089929-63089948	Msa1029610:three_prime_UTR	15.0%
!!	ACAACAAATAAAATATCTAT+GGG	-	chr7_1:63090002-63090021	None:intergenic	15.0%
!!	CTAAAAATGTATTTATTTGT+CGG	-	chr7_1:63090233-63090252	None:intergenic	15.0%
!!	TAAGGAACATAATATTATTA+TGG	+	chr7_1:63090457-63090476	Msa1029610:three_prime_UTR	15.0%
!!	TGATTCTAATAACAAAAACT+TGG	+	chr7_1:63085358-63085377	Msa1029610:intron	20.0%
!!!	TGTTATGTATTTGTTTTTTG+AGG	+	chr7_1:63085856-63085875	Msa1029610:intron	20.0%
!!!	GTTATGTATTTGTTTTTTGA+GGG	+	chr7_1:63085857-63085876	Msa1029610:intron	20.0%
!!!	TTATGTATTTGTTTTTTGAG+GGG	+	chr7_1:63085858-63085877	Msa1029610:intron	20.0%
!!!	GTTGTATAATATAGTACTTT+TGG	+	chr7_1:63085902-63085921	Msa1029610:intron	20.0%
!!!	TTCTTCATAACATTATTTTG+AGG	-	chr7_1:63087349-63087368	None:intergenic	20.0%
!!	TTCTGAACAATAATATTCTT+TGG	+	chr7_1:63087856-63087875	Msa1029610:intron	20.0%
!!	TCTGAACAATAATATTCTTT+GGG	+	chr7_1:63087857-63087876	Msa1029610:intron	20.0%
!!!	TAACCTTACAATTGTTTTTA+AGG	+	chr7_1:63087912-63087931	Msa1029610:intron	20.0%
!!	AATCCTTAAAAACAATTGTA+AGG	-	chr7_1:63087918-63087937	None:intergenic	20.0%
!!!	CATACTGTAATTTTCAAATT+TGG	+	chr7_1:63087940-63087959	Msa1029610:intron	20.0%
!!!	CAACTATAATTTTTAGAAAG+AGG	+	chr7_1:63088182-63088201	Msa1029610:intron	20.0%
!!	CACATAATGTAATAAATGTT+AGG	-	chr7_1:63088741-63088760	None:intergenic	20.0%
!!	AACATTTATTACATTATGTG+TGG	+	chr7_1:63088741-63088760	Msa1029610:intron	20.0%
!!	CATTTCTAAATAATTGTTAC+AGG	-	chr7_1:63088849-63088868	None:intergenic	20.0%
!!	CTGTAACAATTATTTAGAAA+TGG	+	chr7_1:63088847-63088866	Msa1029610:intron	20.0%
!!	AATGGTTTAGTGTAATATTT+AGG	+	chr7_1:63088865-63088884	Msa1029610:intron	20.0%
!!	GATATATCTGTTCAAAAAAA+CGG	-	chr7_1:63089059-63089078	None:intergenic	20.0%
!!	AGCTGTTAATAAAATAAAGA+AGG	-	chr7_1:63089676-63089695	None:intergenic	20.0%
!!	CACAACAAATAAAATATCTA+TGG	-	chr7_1:63090003-63090022	None:intergenic	20.0%
!!!	ATATTGGTTGATATCAATTT+GGG	+	chr7_1:63090048-63090067	Msa1029610:three_prime_UTR	20.0%
!!	TTACTGAGAATATTATAATC+AGG	+	chr7_1:63090139-63090158	Msa1029610:three_prime_UTR	20.0%
!!!	CGACAAATAAATACATTTTT+AGG	+	chr7_1:63090231-63090250	Msa1029610:three_prime_UTR	20.0%
!!	TAATAGATGATGATGATGAT+TGG	-	chr7_1:63084510-63084529	None:intergenic	25.0%
!	GGTTAAATCAACAAGAAAAA+TGG	-	chr7_1:63084716-63084735	None:intergenic	25.0%
!!!	AATGAAAAAAGCATCAAACT+TGG	-	chr7_1:63084750-63084769	None:intergenic	25.0%
!!!	GTTTGATGCTTTTTTCATTA+TGG	+	chr7_1:63084751-63084770	Msa1029610:intron	25.0%
!!	AACAAAAGGAACAGTTTTTA+AGG	+	chr7_1:63084780-63084799	Msa1029610:intron	25.0%
!!	ACAAAAGGAACAGTTTTTAA+GGG	+	chr7_1:63084781-63084800	Msa1029610:intron	25.0%
!!!	ACTTTTTCAAGAATAACCAA+TGG	-	chr7_1:63084880-63084899	None:intergenic	25.0%
!	GGTTATTCTTGAAAAAGTTA+AGG	+	chr7_1:63084882-63084901	Msa1029610:CDS	25.0%
!	GACAGAGTAATATAAGTATA+TGG	-	chr7_1:63084919-63084938	None:intergenic	25.0%
!!!	CTGCATATTTTTGAATTTTG+AGG	+	chr7_1:63084961-63084980	Msa1029610:intron	25.0%
!!	TTGTAATGATTAACTGATTC+AGG	+	chr7_1:63085037-63085056	Msa1029610:intron	25.0%
!!	TGTAATGATTAACTGATTCA+GGG	+	chr7_1:63085038-63085057	Msa1029610:intron	25.0%
!	ATCAAGAGATCGTTAATATT+CGG	+	chr7_1:63085069-63085088	Msa1029610:CDS	25.0%
!	TATATATTATGAGGAGACAT+TGG	+	chr7_1:63085224-63085243	Msa1029610:intron	25.0%
!	TACAAACTTACAATGTTTCT+TGG	-	chr7_1:63085594-63085613	None:intergenic	25.0%
!	TGTAAGTTTGTAACTCTAAA+TGG	+	chr7_1:63085602-63085621	Msa1029610:intron	25.0%
!	GTAAGTTTGTAACTCTAAAT+GGG	+	chr7_1:63085603-63085622	Msa1029610:intron	25.0%
!	CAAAAATAGATGTAGAATTG+TGG	+	chr7_1:63085958-63085977	Msa1029610:intron	25.0%
!!!	AAGTCTTAAATTAGTTCTAG+TGG	+	chr7_1:63086029-63086048	Msa1029610:intron	25.0%
!!!	AGTCTTAAATTAGTTCTAGT+GGG	+	chr7_1:63086030-63086049	Msa1029610:intron	25.0%
!	ATATTAAATTAGAGCCTGTT+TGG	-	chr7_1:63086194-63086213	None:intergenic	25.0%
!	ATCAATACACAAGGATAAAT+TGG	-	chr7_1:63086237-63086256	None:intergenic	25.0%
!	AATTCAACAATCAATACACA+AGG	-	chr7_1:63086246-63086265	None:intergenic	25.0%
!!	TTGTCTTTTTAATGTTTTCC+CGG	+	chr7_1:63086503-63086522	Msa1029610:intron	25.0%
!!	ATTAATCAGCTGTAGTTTTT+AGG	+	chr7_1:63086890-63086909	Msa1029610:intron	25.0%
!!	TTAATCAGCTGTAGTTTTTA+GGG	+	chr7_1:63086891-63086910	Msa1029610:intron	25.0%
!	ACATTGAACAAAATAGCTAA+AGG	-	chr7_1:63086946-63086965	None:intergenic	25.0%
!	TACAAAACATTGTCAAATAG+CGG	+	chr7_1:63086988-63087007	Msa1029610:intron	25.0%
!!!	TTTCAGTTTTTAATTCCTTG+TGG	+	chr7_1:63087178-63087197	Msa1029610:intron	25.0%
!!!	TTCAGTTTTTAATTCCTTGT+GGG	+	chr7_1:63087179-63087198	Msa1029610:intron	25.0%
!	TTATTGCCTTGAAGTTAATA+TGG	+	chr7_1:63087435-63087454	Msa1029610:intron	25.0%
!	AAATAGCCATATTAACTTCA+AGG	-	chr7_1:63087444-63087463	None:intergenic	25.0%
!	AAACTTATCCCAATATATAC+AGG	+	chr7_1:63087536-63087555	Msa1029610:intron	25.0%
!	AACTTATCCCAATATATACA+GGG	+	chr7_1:63087537-63087556	Msa1029610:intron	25.0%
!	TTCTAAACATTACCAGATTA+AGG	-	chr7_1:63087680-63087699	None:intergenic	25.0%
!	GTAAATATGTCGGATTTAAA+GGG	-	chr7_1:63087774-63087793	None:intergenic	25.0%
!	TGTAAATATGTCGGATTTAA+AGG	-	chr7_1:63087775-63087794	None:intergenic	25.0%
!	AATATTTCATCACCATCATT+AGG	-	chr7_1:63088448-63088467	None:intergenic	25.0%
!	AAGCAATGTGTACAATATAA+CGG	-	chr7_1:63088654-63088673	None:intergenic	25.0%
!!!	TTATTTTACATGACGCAAAT+AGG	+	chr7_1:63088815-63088834	Msa1029610:intron	25.0%
!!	TATTTTACATGACGCAAATA+GGG	+	chr7_1:63088816-63088835	Msa1029610:intron	25.0%
!	AAATAATTGTTACAGGCTTA+AGG	-	chr7_1:63088842-63088861	None:intergenic	25.0%
!	TCTATTCTTGATGTATTACA+TGG	+	chr7_1:63088993-63089012	Msa1029610:intron	25.0%
!	CTATTCTTGATGTATTACAT+GGG	+	chr7_1:63088994-63089013	Msa1029610:intron	25.0%
!	CAAATTTCAGCTAAGATTAA+AGG	-	chr7_1:63089242-63089261	None:intergenic	25.0%
!	CTGTCTATAAATTATCTCAT+TGG	+	chr7_1:63089466-63089485	Msa1029610:intron	25.0%
!!	GTCTCTAATATTTTCCTTTA+AGG	+	chr7_1:63089595-63089614	Msa1029610:intron	25.0%
!!	ATTTTATTAACAGCTGTATC+TGG	+	chr7_1:63089681-63089700	Msa1029610:intron	25.0%
!!	GATATTGGTTGATATCAATT+TGG	+	chr7_1:63090047-63090066	Msa1029610:three_prime_UTR	25.0%
!	TTCTCAGTAATCAAATTACA+AGG	-	chr7_1:63090129-63090148	None:intergenic	25.0%
!	TTTAGATTGAGTCTAATTCA+AGG	+	chr7_1:63090365-63090384	Msa1029610:three_prime_UTR	25.0%
!	TTTCTTCAAGTTCCTGAAAT+GGG	+	chr7_1:63084624-63084643	Msa1029610:exon	30.0%
	CATTATGGTCGAAAAACAAA+AGG	+	chr7_1:63084766-63084785	Msa1029610:intron	30.0%
!!!	GGTTTTTTCAATGATGAATG+AGG	+	chr7_1:63084982-63085001	Msa1029610:intron	30.0%
	TTAACGATCTCTTGATACTT+AGG	-	chr7_1:63085065-63085084	None:intergenic	30.0%
	TACTAGTAAATGAAACAAGC+AGG	-	chr7_1:63085484-63085503	None:intergenic	30.0%
	TATATCTTGAACGTATCTTC+TGG	+	chr7_1:63085556-63085575	Msa1029610:intron	30.0%
	TAAACGTGAGCATATTACAA+AGG	-	chr7_1:63085634-63085653	None:intergenic	30.0%
!	AGTTGATGTTCTTGATTACT+TGG	-	chr7_1:63085932-63085951	None:intergenic	30.0%
!!	GTCTTAAATTAGTTCTAGTG+GGG	+	chr7_1:63086031-63086050	Msa1029610:intron	30.0%
	AATCTGATTAAGTGCATGTT+TGG	+	chr7_1:63086073-63086092	Msa1029610:intron	30.0%
	TTTGGAAAGTAAGATTTGCA+TGG	+	chr7_1:63086091-63086110	Msa1029610:intron	30.0%
	CTTCAAAGTCACTGTATATT+AGG	+	chr7_1:63086151-63086170	Msa1029610:intron	30.0%
	ATACACAAGGATAAATTGGT+AGG	-	chr7_1:63086233-63086252	None:intergenic	30.0%
	TTCTCTCTTAATATGTTCAC+AGG	+	chr7_1:63086325-63086344	Msa1029610:intron	30.0%
	TGTTTGTCTTTATATGAACC+TGG	+	chr7_1:63086845-63086864	Msa1029610:intron	30.0%
!	GAAATATGCTACTTCTCTTT+GGG	-	chr7_1:63086917-63086936	None:intergenic	30.0%
!	AGAAATATGCTACTTCTCTT+TGG	-	chr7_1:63086918-63086937	None:intergenic	30.0%
!!	TCAGTTTTTAATTCCTTGTG+GGG	+	chr7_1:63087180-63087199	Msa1029610:intron	30.0%
!	TTTTGAATCAGCTTATTTCC+TGG	+	chr7_1:63087206-63087225	Msa1029610:intron	30.0%
	CTTATTTCCTGGTTGTTTAT+GGG	+	chr7_1:63087217-63087236	Msa1029610:intron	30.0%
	TTATTTCCTGGTTGTTTATG+GGG	+	chr7_1:63087218-63087237	Msa1029610:intron	30.0%
	CTGACGAAATTTAATCGAAA+TGG	+	chr7_1:63087370-63087389	Msa1029610:intron	30.0%
	ACTTATACACAGTAAGATGA+AGG	+	chr7_1:63087492-63087511	Msa1029610:intron	30.0%
	CATTACCAGATTAAGGAAAA+GGG	-	chr7_1:63087673-63087692	None:intergenic	30.0%
	ACATTACCAGATTAAGGAAA+AGG	-	chr7_1:63087674-63087693	None:intergenic	30.0%
	GAATATTTGGCATATGAATG+CGG	+	chr7_1:63088089-63088108	Msa1029610:CDS	30.0%
	AAGATCTGTATACATGTAAC+CGG	-	chr7_1:63088350-63088369	None:intergenic	30.0%
	TAGAATTGGAATTTGCGTAA+TGG	-	chr7_1:63088419-63088438	None:intergenic	30.0%
!!	GTTGGTTATATTGATGGTTT+TGG	+	chr7_1:63088628-63088647	Msa1029610:intron	30.0%
	AACTGTATTGTACAGTATTC+AGG	-	chr7_1:63088686-63088705	None:intergenic	30.0%
	AGCATTCAGCAAAAAAAGAA+AGG	-	chr7_1:63088717-63088736	None:intergenic	30.0%
	GTGTGGTATTTACTATGAAA+TGG	+	chr7_1:63088758-63088777	Msa1029610:intron	30.0%
	TGAGGTTAATCTTGTCAATT+TGG	+	chr7_1:63089121-63089140	Msa1029610:intron	30.0%
	AAGAGGAAGTTATCAATTGA+TGG	-	chr7_1:63089159-63089178	None:intergenic	30.0%
!	CTCTTAACTTTGTTTACTCT+CGG	+	chr7_1:63089174-63089193	Msa1029610:intron	30.0%
	TATATTCTAGTGACACATCA+TGG	+	chr7_1:63089336-63089355	Msa1029610:intron	30.0%
	AAGACGTAAAATTTATGACC+TGG	-	chr7_1:63089424-63089443	None:intergenic	30.0%
	CTCTATGCAAATTATGCTAT+TGG	+	chr7_1:63089511-63089530	Msa1029610:CDS	30.0%
	TGCAAATTATGCTATTGGAA+AGG	+	chr7_1:63089516-63089535	Msa1029610:CDS	30.0%
	AAAGGAAAATATTAGAGACC+AGG	-	chr7_1:63089594-63089613	None:intergenic	30.0%
	TGAAGTTGTCCTTGAAATAA+TGG	+	chr7_1:63089637-63089656	Msa1029610:intron	30.0%
	ATAGAAGAAATAAGGACTGT+TGG	-	chr7_1:63089904-63089923	None:intergenic	30.0%
	TGTGCTGAATAGAAGAAATA+AGG	-	chr7_1:63089912-63089931	None:intergenic	30.0%
	ACATATAATAAAGGTCTGAG+TGG	+	chr7_1:63089938-63089957	Msa1029610:three_prime_UTR	30.0%
!	TCAATTTGGGATAGTGTTAA+TGG	+	chr7_1:63090061-63090080	Msa1029610:three_prime_UTR	30.0%
	TAATCAGGACAGTTATTTGT+TGG	+	chr7_1:63090154-63090173	Msa1029610:three_prime_UTR	30.0%
!	GTTGGTCACTCTATTAATTT+TGG	+	chr7_1:63090172-63090191	Msa1029610:three_prime_UTR	30.0%
	AAAGTCTATTCAAGATCCAT+TGG	-	chr7_1:63090330-63090349	None:intergenic	30.0%
!!!	AGGAATGTTATTTTCCATCA+TGG	+	chr7_1:63090406-63090425	Msa1029610:three_prime_UTR	30.0%
!!!	GGAATGTTATTTTCCATCAT+GGG	+	chr7_1:63090407-63090426	Msa1029610:three_prime_UTR	30.0%
!!!	GGAAAGTTTTTTTGGATCAT+TGG	+	chr7_1:63090428-63090447	Msa1029610:three_prime_UTR	30.0%
	TTGGATCATTGGATTATGTA+AGG	+	chr7_1:63090439-63090458	Msa1029610:three_prime_UTR	30.0%
!	TAATTGGGCTATTTCCTTGA+TGG	+	chr7_1:63084466-63084485	Msa1029610:five_prime_UTR	35.0%
	TCAGATCAATCATTCTGTGA+AGG	+	chr7_1:63084597-63084616	Msa1029610:five_prime_UTR	35.0%
	CAGATCAATCATTCTGTGAA+GGG	+	chr7_1:63084598-63084617	Msa1029610:five_prime_UTR	35.0%
!	CTTTCTTCAAGTTCCTGAAA+TGG	+	chr7_1:63084623-63084642	Msa1029610:exon	35.0%
!	TCTTCATCATGAGCATTTTG+AGG	-	chr7_1:63084654-63084673	None:intergenic	35.0%
	CAAAATGCTCATGATGAAGA+TGG	+	chr7_1:63084654-63084673	Msa1029610:CDS	35.0%
!!!	TCAAACTTGGTGGTGTTTTT+TGG	-	chr7_1:63084737-63084756	None:intergenic	35.0%
!!	GAAAAAAGCATCAAACTTGG+TGG	-	chr7_1:63084747-63084766	None:intergenic	35.0%
	GAGATCGTTAATATTCGGTT+AGG	+	chr7_1:63085074-63085093	Msa1029610:CDS	35.0%
	GTTAATATTCGGTTAGGAGA+TGG	+	chr7_1:63085080-63085099	Msa1029610:CDS	35.0%
	TGGTTACATGTCGAATATAG+AGG	-	chr7_1:63085250-63085269	None:intergenic	35.0%
	TGCTGTCTTTACTTTGTTCA+TGG	+	chr7_1:63085332-63085351	Msa1029610:intron	35.0%
	AGATGTACCTTCAAAAACCT+AGG	-	chr7_1:63085413-63085432	None:intergenic	35.0%
!!	TAGGTTTTTGAAGGTACATC+TGG	+	chr7_1:63085412-63085431	Msa1029610:intron	35.0%
!!	AGGTTTTTGAAGGTACATCT+GGG	+	chr7_1:63085413-63085432	Msa1029610:intron	35.0%
	TTCACAACTGTGCAATTTAC+TGG	+	chr7_1:63085448-63085467	Msa1029610:CDS	35.0%
!	ACTCTGAGAGATATATGTTG+TGG	+	chr7_1:63085653-63085672	Msa1029610:intron	35.0%
	TGTGGTGGTTAACATAGAAT+TGG	+	chr7_1:63085671-63085690	Msa1029610:intron	35.0%
	GTGGTGGTTAACATAGAATT+GGG	+	chr7_1:63085672-63085691	Msa1029610:intron	35.0%
	CATAGAATTGGGTTAATCAG+TGG	+	chr7_1:63085683-63085702	Msa1029610:intron	35.0%
	TTTGAGGGGTAACTTATAGA+AGG	+	chr7_1:63085872-63085891	Msa1029610:intron	35.0%
	TTGAGGGGTAACTTATAGAA+GGG	+	chr7_1:63085873-63085892	Msa1029610:intron	35.0%
	GTAACTTATAGAAGGGACTT+TGG	+	chr7_1:63085880-63085899	Msa1029610:intron	35.0%
!	CTAAAATTGTGCCGTTCATA+AGG	+	chr7_1:63085985-63086004	Msa1029610:intron	35.0%
	TAGAAGCCAAACCTTATGAA+CGG	-	chr7_1:63085999-63086018	None:intergenic	35.0%
	TGCACTTAATCAGATTGCAA+AGG	-	chr7_1:63086069-63086088	None:intergenic	35.0%
	ATAGCTTCGTGATAGATTTG+TGG	-	chr7_1:63086122-63086141	None:intergenic	35.0%
	AACTTATCAACAGAGAGTCA+AGG	-	chr7_1:63086285-63086304	None:intergenic	35.0%
	GTTAAAAACTCCTGTATCAC+TGG	+	chr7_1:63086349-63086368	Msa1029610:CDS	35.0%
	TCAGGAAAACCAATTGACAA+TGG	+	chr7_1:63086398-63086417	Msa1029610:CDS	35.0%
	AAGTAAGCCTCAGGTAATAT+GGG	-	chr7_1:63086428-63086447	None:intergenic	35.0%
	GTCATGAATTCTATTGCTAG+AGG	+	chr7_1:63086605-63086624	Msa1029610:CDS	35.0%
	TGTGCAGCAATTTCATTATG+GGG	-	chr7_1:63086665-63086684	None:intergenic	35.0%
	CTGTGCAGCAATTTCATTAT+GGG	-	chr7_1:63086666-63086685	None:intergenic	35.0%
	TCTGTGCAGCAATTTCATTA+TGG	-	chr7_1:63086667-63086686	None:intergenic	35.0%
	TCTTTATATGAACCTGGCTA+AGG	+	chr7_1:63086851-63086870	Msa1029610:intron	35.0%
	GTGCAAGGCAACAAAATTAA+CGG	-	chr7_1:63087086-63087105	None:intergenic	35.0%
!!	ACGTGCATCACTTTTATTTC+AGG	+	chr7_1:63087125-63087144	Msa1029610:intron	35.0%
	GCTTATTTCCTGGTTGTTTA+TGG	+	chr7_1:63087216-63087235	Msa1029610:intron	35.0%
	TATTTCCTGGTTGTTTATGG+GGG	+	chr7_1:63087219-63087238	Msa1029610:intron	35.0%
	TATACACAGTAAGATGAAGG+TGG	+	chr7_1:63087495-63087514	Msa1029610:intron	35.0%
	TTATCCCAATATATACAGGG+TGG	+	chr7_1:63087540-63087559	Msa1029610:intron	35.0%
	TTCTCCACCCTGTATATATT+GGG	-	chr7_1:63087547-63087566	None:intergenic	35.0%
!	AAACGTGACTTTGAAGAGAA+TGG	+	chr7_1:63087630-63087649	Msa1029610:CDS	35.0%
!	GGGAACAAAATATAATGGGA+AGG	-	chr7_1:63087750-63087769	None:intergenic	35.0%
	GGGAGGGAACAAAATATAAT+GGG	-	chr7_1:63087754-63087773	None:intergenic	35.0%
	AGGGAGGGAACAAAATATAA+TGG	-	chr7_1:63087755-63087774	None:intergenic	35.0%
	ATATGTCGGATTTAAAGGGA+GGG	-	chr7_1:63087770-63087789	None:intergenic	35.0%
	AATATGTCGGATTTAAAGGG+AGG	-	chr7_1:63087771-63087790	None:intergenic	35.0%
	ATGCTGGTATGATTTATTGC+AGG	+	chr7_1:63088010-63088029	Msa1029610:intron	35.0%
	TCTTACCACTGCTGAATATT+TGG	+	chr7_1:63088076-63088095	Msa1029610:CDS	35.0%
	ATATGCCAAATATTCAGCAG+TGG	-	chr7_1:63088084-63088103	None:intergenic	35.0%
	ATGAAACTATTGCTCACTTC+TGG	+	chr7_1:63088271-63088290	Msa1029610:intron	35.0%
	AGATCTGTATACATGTAACC+GGG	-	chr7_1:63088349-63088368	None:intergenic	35.0%
	TCATTAGGCATGGTTAGAAT+TGG	-	chr7_1:63088433-63088452	None:intergenic	35.0%
	ATTCTAACCATGCCTAATGA+TGG	+	chr7_1:63088433-63088452	Msa1029610:CDS	35.0%
	GTGATATATCCAGTAAGATC+AGG	-	chr7_1:63088565-63088584	None:intergenic	35.0%
	ATCAATATATATCTGCCCCT+CGG	-	chr7_1:63088587-63088606	None:intergenic	35.0%
	AGGGGCAGATATATATTGAT+AGG	+	chr7_1:63088587-63088606	Msa1029610:CDS	35.0%
!!	AGACAGGTTGGTTATATTGA+TGG	+	chr7_1:63088622-63088641	Msa1029610:intron	35.0%
!	GTGATTTGCAGTTATCTGTT+AGG	+	chr7_1:63088894-63088913	Msa1029610:intron	35.0%
	TTCATTAATCGAGACAGAGA+TGG	-	chr7_1:63089099-63089118	None:intergenic	35.0%
	ATCTCTGTCTCGATTAATGA+AGG	+	chr7_1:63089098-63089117	Msa1029610:CDS	35.0%
	CGAGAGTAAACAAAGTTAAG+AGG	-	chr7_1:63089176-63089195	None:intergenic	35.0%
	ATTGAACCGAATCAAGTCTA+AGG	-	chr7_1:63089213-63089232	None:intergenic	35.0%
	GCTGAAATTTGTCACAATTC+TGG	+	chr7_1:63089251-63089270	Msa1029610:intron	35.0%
	CGTAAAATTTATGACCTGGT+TGG	-	chr7_1:63089420-63089439	None:intergenic	35.0%
!	TAGCATAATTTGCATAGAGC+TGG	-	chr7_1:63089510-63089529	None:intergenic	35.0%
!	AATTTCTGGACAAGTTTGAG+AGG	+	chr7_1:63089704-63089723	Msa1029610:CDS	35.0%
	TAGAGATTGGAAGATGTTTC+GGG	-	chr7_1:63089758-63089777	None:intergenic	35.0%
	CTAGAGATTGGAAGATGTTT+CGG	-	chr7_1:63089759-63089778	None:intergenic	35.0%
	TGAATCAATTGCTAGCATCT+CGG	-	chr7_1:63089864-63089883	None:intergenic	35.0%
!!!	TTGTTGTGCCAATTTTTTCC+TGG	+	chr7_1:63090015-63090034	Msa1029610:three_prime_UTR	35.0%
!!!	TGTTGTGCCAATTTTTTCCT+GGG	+	chr7_1:63090016-63090035	Msa1029610:three_prime_UTR	35.0%
	GATGTCCAATCATAGACATT+AGG	-	chr7_1:63090294-63090313	None:intergenic	35.0%
	ATTGAGTCTAATTCAAGGTG+AGG	+	chr7_1:63090370-63090389	Msa1029610:three_prime_UTR	35.0%
	CCAAAAAAACTTTCCCATGA+TGG	-	chr7_1:63090423-63090442	None:intergenic	35.0%
!!!	CCATCATGGGAAAGTTTTTT+TGG	+	chr7_1:63090420-63090439	Msa1029610:three_prime_UTR	35.0%
	AGATGATAATAGAGGATGAG+TGG	-	chr7_1:63090503-63090522	None:intergenic	35.0%
	TAGGAGGAAGATGATAATAG+AGG	-	chr7_1:63090511-63090530	None:intergenic	35.0%
	AACAAATGCACGAACCATCA+AGG	-	chr7_1:63084483-63084502	None:intergenic	40.0%
	TCATGATGAAGATGGAACCT+TGG	+	chr7_1:63084662-63084681	Msa1029610:CDS	40.0%
	GAAGATGGAACCTTGGAAAT+CGG	+	chr7_1:63084669-63084688	Msa1029610:CDS	40.0%
!	CAGAGTACAGAACTGTTTCT+GGG	+	chr7_1:63084845-63084864	Msa1029610:intron	40.0%
!!	AGAGTACAGAACTGTTTCTG+GGG	+	chr7_1:63084846-63084865	Msa1029610:intron	40.0%
	AATGATGAATGAGGATGCTC+TGG	+	chr7_1:63084991-63085010	Msa1029610:intron	40.0%
!!	GGACAAGTTCTAGAAGTTGA+TGG	+	chr7_1:63085116-63085135	Msa1029610:CDS	40.0%
!	AGCTTTTTGTACCATTGCCT+AGG	+	chr7_1:63085393-63085412	Msa1029610:intron	40.0%
!	ACCATTGCCTAGGTTTTTGA+AGG	+	chr7_1:63085403-63085422	Msa1029610:intron	40.0%
	ACCTTCAAAAACCTAGGCAA+TGG	-	chr7_1:63085407-63085426	None:intergenic	40.0%
	AACTGTGCAATTTACTGGAG+AGG	+	chr7_1:63085453-63085472	Msa1029610:CDS	40.0%
	CTGAGAGATATATGTTGTGG+TGG	+	chr7_1:63085656-63085675	Msa1029610:intron	40.0%
!	ATTGTGCCGTTCATAAGGTT+TGG	+	chr7_1:63085990-63086009	Msa1029610:intron	40.0%
!	TTAGAGCCTGTTTGGAATCA+CGG	-	chr7_1:63086186-63086205	None:intergenic	40.0%
	CACAAGGATAAATTGGTAGG+AGG	-	chr7_1:63086230-63086249	None:intergenic	40.0%
	TTCCTGAACCGTTAAAGATG+CGG	-	chr7_1:63086385-63086404	None:intergenic	40.0%
	CAAGTAAGCCTCAGGTAATA+TGG	-	chr7_1:63086429-63086448	None:intergenic	40.0%
	CATATTACCTGAGGCTTACT+TGG	+	chr7_1:63086427-63086446	Msa1029610:CDS	40.0%
!	ACCTGCAGATTTAGAACTCT+CGG	-	chr7_1:63086477-63086496	None:intergenic	40.0%
!	TAATGTTTTCCCGGCAATTC+AGG	+	chr7_1:63086512-63086531	Msa1029610:intron	40.0%
	ATAGAACTTCCTGAATTGCC+GGG	-	chr7_1:63086524-63086543	None:intergenic	40.0%
	GATAGAACTTCCTGAATTGC+CGG	-	chr7_1:63086525-63086544	None:intergenic	40.0%
	CTGAATCATCTCTTCTGGAT+AGG	-	chr7_1:63086564-63086583	None:intergenic	40.0%
	TCCAGAAGAGATGATTCAGA+CGG	+	chr7_1:63086565-63086584	Msa1029610:CDS	40.0%
	GTGCAGCAATTTCATTATGG+GGG	-	chr7_1:63086664-63086683	None:intergenic	40.0%
!	GTATGAAGCGCTCATATTTC+AGG	-	chr7_1:63086793-63086812	None:intergenic	40.0%
!!	GTTATAGCACTGATACACAG+CGG	+	chr7_1:63087021-63087040	Msa1029610:intron	40.0%
	TCGCAGATTGCAGAAAATAG+TGG	-	chr7_1:63087059-63087078	None:intergenic	40.0%
!	TGAGCATTAACAAGAGTGCA+AGG	-	chr7_1:63087101-63087120	None:intergenic	40.0%
	ATTTCCTGGTTGTTTATGGG+GGG	+	chr7_1:63087220-63087239	Msa1029610:intron	40.0%
!!!	AATGGCCTAGCTTGTTGTTT+TGG	+	chr7_1:63087388-63087407	Msa1029610:intron	40.0%
	CTTCTCCACCCTGTATATAT+TGG	-	chr7_1:63087548-63087567	None:intergenic	40.0%
!	CTTTGAAGAGAATGGCTCTA+TGG	+	chr7_1:63087638-63087657	Msa1029610:CDS	40.0%
!	AGTGACCCTTTTCCTTAATC+TGG	+	chr7_1:63087665-63087684	Msa1029610:CDS	40.0%
!!	TATTCTTTGGGAGCACCAAT+TGG	+	chr7_1:63087869-63087888	Msa1029610:intron	40.0%
	AACATGACACATCCACCAAT+TGG	-	chr7_1:63087887-63087906	None:intergenic	40.0%
	CATGGTAAGGATCATTTCGT+CGG	-	chr7_1:63087981-63088000	None:intergenic	40.0%
	GCATAAGAACAAGCATGGTA+AGG	-	chr7_1:63087994-63088013	None:intergenic	40.0%
	TACCATGCTTGTTCTTATGC+TGG	+	chr7_1:63087994-63088013	Msa1029610:intron	40.0%
	TACCAGCATAAGAACAAGCA+TGG	-	chr7_1:63087999-63088018	None:intergenic	40.0%
	GTGATGATACGCTCAATTGT+AGG	-	chr7_1:63088044-63088063	None:intergenic	40.0%
	TTCATCACCATCATTAGGCA+TGG	-	chr7_1:63088443-63088462	None:intergenic	40.0%
	TATCCAGTAAGATCAGGAGT+TGG	-	chr7_1:63088559-63088578	None:intergenic	40.0%
	TCTTACTGGATATATCACCG+AGG	+	chr7_1:63088567-63088586	Msa1029610:CDS	40.0%
	CTTACTGGATATATCACCGA+GGG	+	chr7_1:63088568-63088587	Msa1029610:CDS	40.0%
	TTACTGGATATATCACCGAG+GGG	+	chr7_1:63088569-63088588	Msa1029610:CDS	40.0%
	AGAGATGGAAGGACATTGAT+TGG	-	chr7_1:63089084-63089103	None:intergenic	40.0%
	TTAATCGAGACAGAGATGGA+AGG	-	chr7_1:63089095-63089114	None:intergenic	40.0%
	TGTCTCGATTAATGAAGGTG+AGG	+	chr7_1:63089103-63089122	Msa1029610:intron	40.0%
	AGACGTCCTTAGACTTGATT+CGG	+	chr7_1:63089204-63089223	Msa1029610:intron	40.0%
	TGCTATTGGAAAGGATGTTC+AGG	+	chr7_1:63089525-63089544	Msa1029610:CDS	40.0%
	AATATTAGAGACCAGGTCCT+CGG	-	chr7_1:63089587-63089606	None:intergenic	40.0%
!	ACAGCTGTATCTGGAATTTC+TGG	+	chr7_1:63089690-63089709	Msa1029610:intron	40.0%
!	GAAGATGTTTCGGGTATCAT+AGG	-	chr7_1:63089749-63089768	None:intergenic	40.0%
	TCCAATCTCTAGATCTTGCA+TGG	+	chr7_1:63089767-63089786	Msa1029610:CDS	40.0%
	TCCATGCAAGATCTAGAGAT+TGG	-	chr7_1:63089771-63089790	None:intergenic	40.0%
	ATCTTGCATGGACTTTGCTT+CGG	+	chr7_1:63089779-63089798	Msa1029610:CDS	40.0%
	GTCTTCACTCTGACTATATG+AGG	-	chr7_1:63089980-63089999	None:intergenic	40.0%
!!!	GTTGTGCCAATTTTTTCCTG+GGG	+	chr7_1:63090017-63090036	Msa1029610:three_prime_UTR	40.0%
	GCGAAATATTCAGTGCAGTT+AGG	+	chr7_1:63090088-63090107	Msa1029610:three_prime_UTR	40.0%
	CACCACCTAATGTCTATGAT+TGG	+	chr7_1:63090286-63090305	Msa1029610:three_prime_UTR	40.0%
	GTCCAATCATAGACATTAGG+TGG	-	chr7_1:63090291-63090310	None:intergenic	40.0%
!	ATGATTGGACATCTAGAGCA+TGG	+	chr7_1:63090301-63090320	Msa1029610:three_prime_UTR	40.0%
	ATTCAAGGTGAGGTTTAGCT+TGG	+	chr7_1:63090380-63090399	Msa1029610:three_prime_UTR	40.0%
!	TTCAAGGTGAGGTTTAGCTT+GGG	+	chr7_1:63090381-63090400	Msa1029610:three_prime_UTR	40.0%
!	AGAGGATGAGTGGTTATTTC+TGG	-	chr7_1:63090493-63090512	None:intergenic	40.0%
!!!	TTTTGAGGCACACCCATTTC+AGG	-	chr7_1:63084639-63084658	None:intergenic	45.0%
	TGGAACCTTGGAAATCGGAA+TGG	+	chr7_1:63084674-63084693	Msa1029610:CDS	45.0%
	GGAACCTTGGAAATCGGAAT+GGG	+	chr7_1:63084675-63084694	Msa1029610:CDS	45.0%
	GCAGAGTACAGAACTGTTTC+TGG	+	chr7_1:63084844-63084863	Msa1029610:intron	45.0%
	TGGCGAAAAAGCTGTTGTTC+AGG	+	chr7_1:63085136-63085155	Msa1029610:CDS	45.0%
	CTTCGTGATAGATTTGTGGC+GGG	-	chr7_1:63086118-63086137	None:intergenic	45.0%
	GCTTCGTGATAGATTTGTGG+CGG	-	chr7_1:63086119-63086138	None:intergenic	45.0%
!	GTTTGGAATCACGGTAGGAA+TGG	-	chr7_1:63086177-63086196	None:intergenic	45.0%
	TTCCTACCGTGATTCCAAAC+AGG	+	chr7_1:63086177-63086196	Msa1029610:intron	45.0%
	ATGCTTGGCCGCATCTTTAA+CGG	+	chr7_1:63086374-63086393	Msa1029610:CDS	45.0%
	ATGGGTGGACCATTGTCAAT+TGG	-	chr7_1:63086410-63086429	None:intergenic	45.0%
	TAAGCCTCAGGTAATATGGG+TGG	-	chr7_1:63086425-63086444	None:intergenic	45.0%
	GATATGTCCAAGTAAGCCTC+AGG	-	chr7_1:63086437-63086456	None:intergenic	45.0%
	GAGGCTTACTTGGACATATC+AGG	+	chr7_1:63086437-63086456	Msa1029610:CDS	45.0%
!	CCTGCAGATTTAGAACTCTC+GGG	-	chr7_1:63086476-63086495	None:intergenic	45.0%
	CTGGATAGGTTCTCTCACTA+GGG	-	chr7_1:63086550-63086569	None:intergenic	45.0%
	TCTGGATAGGTTCTCTCACT+AGG	-	chr7_1:63086551-63086570	None:intergenic	45.0%
	CCAGAAGAGATGATTCAGAC+GGG	+	chr7_1:63086566-63086585	Msa1029610:CDS	45.0%
	GAAATCTGACAACCTTCTCG+AGG	+	chr7_1:63086721-63086740	Msa1029610:CDS	45.0%
!!	ACAACCTTCTCGAGGTATTG+CGG	+	chr7_1:63086729-63086748	Msa1029610:intron	45.0%
	TGAACCTGGCTAAGGCAATA+TGG	+	chr7_1:63086859-63086878	Msa1029610:intron	45.0%
	GAACCTGGCTAAGGCAATAT+GGG	+	chr7_1:63086860-63086879	Msa1029610:intron	45.0%
!!	TGATTCAAAAGCACCCCACA+AGG	-	chr7_1:63087196-63087215	None:intergenic	45.0%
	TTTCCTGGTTGTTTATGGGG+GGG	+	chr7_1:63087221-63087240	Msa1029610:intron	45.0%
	AAGCGCCAAAACAACAAGCT+AGG	-	chr7_1:63087396-63087415	None:intergenic	45.0%
	TGCTATTGTGTTTGCAGCCA+TGG	+	chr7_1:63087578-63087597	Msa1029610:CDS	45.0%
	GCTATTGTGTTTGCAGCCAT+GGG	+	chr7_1:63087579-63087598	Msa1029610:CDS	45.0%
	AGTCTCCATGTTAACTCCCA+TGG	-	chr7_1:63087598-63087617	None:intergenic	45.0%
	TTATGCTGATGCTCTTCGTG+AGG	+	chr7_1:63088148-63088167	Msa1029610:CDS	45.0%
!	GCTCACTTCTGGATCCTTTT+AGG	+	chr7_1:63088282-63088301	Msa1029610:intron	45.0%
	GCAACAATATATGAGCGTGC+TGG	+	chr7_1:63088370-63088389	Msa1029610:CDS	45.0%
	GGAAGAATTGAGGGTCGAAA+AGG	+	chr7_1:63088391-63088410	Msa1029610:CDS	45.0%
	CATCCAACTCCTGATCTTAC+TGG	+	chr7_1:63088553-63088572	Msa1029610:CDS	45.0%
!	GATGGAAGGACATTGATTGG+TGG	-	chr7_1:63089081-63089100	None:intergenic	45.0%
!	CTTTGCTTCGGATTTTCCCT+CGG	+	chr7_1:63089791-63089810	Msa1029610:CDS	45.0%
!	TTTGCTTCGGATTTTCCCTC+GGG	+	chr7_1:63089792-63089811	Msa1029610:CDS	45.0%
	GGAGCTTCTTCATCGTATAC+CGG	+	chr7_1:63089813-63089832	Msa1029610:CDS	45.0%
	TACTGATCGAGAGTCTTTGC+CGG	-	chr7_1:63089835-63089854	None:intergenic	45.0%
	TCACCACCCCAGGAAAAAAT+TGG	-	chr7_1:63090026-63090045	None:intergenic	45.0%
!!!	AATTTTTTCCTGGGGTGGTG+AGG	+	chr7_1:63090025-63090044	Msa1029610:three_prime_UTR	45.0%
	AGACATTAGGTGGTGTGTTG+AGG	-	chr7_1:63090281-63090300	None:intergenic	45.0%
!	ATCTAGAGCATGGCATCCAA+TGG	+	chr7_1:63090311-63090330	Msa1029610:three_prime_UTR	45.0%
	TGTAGCATCAGAGGAAGAGA+CGG	-	chr7_1:63090577-63090596	None:intergenic	45.0%
!!	ATATATATATATATATTATG+AGG	+	chr7_1:63085215-63085234	Msa1029610:intron	5.0%
	CTGACCCATTCCGATTTCCA+AGG	-	chr7_1:63084682-63084701	None:intergenic	50.0%
!!	AGAACTGTTTCTGGGGTTGC+TGG	+	chr7_1:63084853-63084872	Msa1029610:CDS	50.0%
	GGTTAGGAGATGGAACGACT+AGG	+	chr7_1:63085090-63085109	Msa1029610:CDS	50.0%
!	AGCCTGTTTGGAATCACGGT+AGG	-	chr7_1:63086182-63086201	None:intergenic	50.0%
	CCAAGCATGTCCAGTGATAC+AGG	-	chr7_1:63086362-63086381	None:intergenic	50.0%
	CCTGTATCACTGGACATGCT+TGG	+	chr7_1:63086359-63086378	Msa1029610:CDS	50.0%
	TGGTCCACCCATATTACCTG+AGG	+	chr7_1:63086418-63086437	Msa1029610:CDS	50.0%
!!	CCCGAGAGTTCTAAATCTGC+AGG	+	chr7_1:63086473-63086492	Msa1029610:intron	50.0%
	CCCGTCTGAATCATCTCTTC+TGG	-	chr7_1:63086569-63086588	None:intergenic	50.0%
!	ATCCCTCTTTTCTCAGCTGC+TGG	+	chr7_1:63086635-63086654	Msa1029610:CDS	50.0%
	GACCAGCAGCTGAGAAAAGA+GGG	-	chr7_1:63086640-63086659	None:intergenic	50.0%
	AGACCAGCAGCTGAGAAAAG+AGG	-	chr7_1:63086641-63086660	None:intergenic	50.0%
	ACATCCGCAATACCTCGAGA+AGG	-	chr7_1:63086736-63086755	None:intergenic	50.0%
	GTTCCCATATTGCCTTAGCC+AGG	-	chr7_1:63086866-63086885	None:intergenic	50.0%
	TGCAGCCATGGGAGTTAACA+TGG	+	chr7_1:63087590-63087609	Msa1029610:CDS	50.0%
!!	TCTTTGGGAGCACCAATTGG+TGG	+	chr7_1:63087872-63087891	Msa1029610:intron	50.0%
	GCAGTGGTAAGAGCAATACG+AGG	-	chr7_1:63088068-63088087	None:intergenic	50.0%
	TCGGGCAGCAGATACCTAAA+AGG	-	chr7_1:63088299-63088318	None:intergenic	50.0%
	TCTACCAGGCACTTCTTCTC+GGG	-	chr7_1:63088317-63088336	None:intergenic	50.0%
	GTCTACCAGGCACTTCTTCT+CGG	-	chr7_1:63088318-63088337	None:intergenic	50.0%
	TGAGCGTGCTGGAAGAATTG+AGG	+	chr7_1:63088381-63088400	Msa1029610:CDS	50.0%
	GAGCGTGCTGGAAGAATTGA+GGG	+	chr7_1:63088382-63088401	Msa1029610:CDS	50.0%
	TAGGCAGTTGCACAACAGAC+AGG	+	chr7_1:63088606-63088625	Msa1029610:CDS	50.0%
	CAGTTGCACAACAGACAGGT+TGG	+	chr7_1:63088610-63088629	Msa1029610:intron	50.0%
!	TTGTCTCTGCAGAGTGCCAT+TGG	+	chr7_1:63089359-63089378	Msa1029610:intron	50.0%
!	TGTCTCTGCAGAGTGCCATT+GGG	+	chr7_1:63089360-63089379	Msa1029610:intron	50.0%
	TCACTCTGATGTGTCCAACC+AGG	+	chr7_1:63089403-63089422	Msa1029610:CDS	50.0%
	TGTTCAGGCAATGAAAGCCG+TGG	+	chr7_1:63089540-63089559	Msa1029610:CDS	50.0%
	AAGTGCTTCTTCTCCGACCA+CGG	-	chr7_1:63089560-63089579	None:intergenic	50.0%
!!	AGAAGAAGCACTTTCGTCCG+AGG	+	chr7_1:63089567-63089586	Msa1029610:CDS	50.0%
	TACGATGAAGAAGCTCCCGA+GGG	-	chr7_1:63089810-63089829	None:intergenic	50.0%
	ATACGATGAAGAAGCTCCCG+AGG	-	chr7_1:63089811-63089830	None:intergenic	50.0%
!!!	GTGCCAATTTTTTCCTGGGG+TGG	+	chr7_1:63090020-63090039	Msa1029610:three_prime_UTR	50.0%
!!	GGTGAGGTTTAGCTTGGGAA+AGG	+	chr7_1:63090386-63090405	Msa1029610:three_prime_UTR	50.0%
	GTGTGCAACTGTAGCATCAG+AGG	-	chr7_1:63090586-63090605	None:intergenic	50.0%
!!	TTCTGGGGTTGCTGGACCAT+TGG	+	chr7_1:63084861-63084880	Msa1029610:CDS	55.0%
	GGCCGCATCTTTAACGGTTC+AGG	+	chr7_1:63086380-63086399	Msa1029610:CDS	55.0%
	TGCTGCACAGATATGTCGCC+AGG	+	chr7_1:63086676-63086695	Msa1029610:CDS	55.0%
	TAGCCCCCCCATAAACAACC+AGG	-	chr7_1:63087227-63087246	None:intergenic	55.0%
!!	GAAGAAGTGCCTGGTAGACG+TGG	+	chr7_1:63088319-63088338	Msa1029610:CDS	55.0%
	CCTGGTAGACGTGGTTATCC+CGG	+	chr7_1:63088328-63088347	Msa1029610:CDS	55.0%
!	GTCTCTGCAGAGTGCCATTG+GGG	+	chr7_1:63089361-63089380	Msa1029610:intron	55.0%
!	TCGTGTCATTCCCTCCCCAA+TGG	-	chr7_1:63089378-63089397	None:intergenic	55.0%
	TTGGGGAGGGAATGACACGA+AGG	+	chr7_1:63089378-63089397	Msa1029610:CDS	55.0%
	TGGGGAGGGAATGACACGAA+GGG	+	chr7_1:63089379-63089398	Msa1029610:CDS	55.0%
	CAGGCAATGAAAGCCGTGGT+CGG	+	chr7_1:63089544-63089563	Msa1029610:CDS	55.0%
	GAGAGGAAGTTCGTCGCTCA+AGG	+	chr7_1:63089721-63089740	Msa1029610:CDS	55.0%
	TCCTGGGGTGGTGAGGATAT+TGG	+	chr7_1:63090032-63090051	Msa1029610:three_prime_UTR	55.0%
	ACCAATATCCTCACCACCCC+AGG	-	chr7_1:63090036-63090055	None:intergenic	55.0%
	AGCATCAGAGGAAGAGACGG+CGG	-	chr7_1:63090574-63090593	None:intergenic	55.0%
	GGAGATGGAACGACTAGGCG+TGG	+	chr7_1:63085095-63085114	Msa1029610:CDS	60.0%
	GCACAGATATGTCGCCAGGC+TGG	+	chr7_1:63086680-63086699	Msa1029610:CDS	60.0%
	GTCGCTTGACTAAGCCAGCC+TGG	-	chr7_1:63086697-63086716	None:intergenic	60.0%
	CCGGGATAACCACGTCTACC+AGG	-	chr7_1:63088331-63088350	None:intergenic	60.0%
!	TCTGCAGAGTGCCATTGGGG+AGG	+	chr7_1:63089364-63089383	Msa1029610:intron	60.0%
!	CTGCAGAGTGCCATTGGGGA+GGG	+	chr7_1:63089365-63089384	Msa1029610:intron	60.0%
	AGCACTTTCGTCCGAGGACC+TGG	+	chr7_1:63089573-63089592	Msa1029610:CDS	60.0%
!	AAGGTCCGATGAGGTGGTGG+GGG	-	chr7_1:63090535-63090554	None:intergenic	60.0%
	GAAGGTCCGATGAGGTGGTG+GGG	-	chr7_1:63090536-63090555	None:intergenic	60.0%
	GGAAGGTCCGATGAGGTGGT+GGG	-	chr7_1:63090537-63090556	None:intergenic	60.0%
	TGGAAGGTCCGATGAGGTGG+TGG	-	chr7_1:63090538-63090557	None:intergenic	60.0%
	TCACGGTGGAAGGTCCGATG+AGG	-	chr7_1:63090544-63090563	None:intergenic	60.0%
	ATCAGAGGAAGAGACGGCGG+CGG	-	chr7_1:63090571-63090590	None:intergenic	60.0%
!!	GCTGCCCGAGAAGAAGTGCC+TGG	+	chr7_1:63088310-63088329	Msa1029610:CDS	65.0%
!!	ATGAGGTGGTGGGGGCTAGG+AGG	-	chr7_1:63090527-63090546	None:intergenic	65.0%
	CCTAGCCCCCACCACCTCAT+CGG	+	chr7_1:63090527-63090546	Msa1029610:three_prime_UTR	65.0%
	CGGTGGAAGGTCCGATGAGG+TGG	-	chr7_1:63090541-63090560	None:intergenic	65.0%
!!	CCGATGAGGTGGTGGGGGCT+AGG	-	chr7_1:63090530-63090549	None:intergenic	70.0%
	CGGCGGAAGGTCACGGTGGA+AGG	-	chr7_1:63090554-63090573	None:intergenic	70.0%
	GAGACGGCGGCGGAAGGTCA+CGG	-	chr7_1:63090561-63090580	None:intergenic	70.0%
	GAGGAAGAGACGGCGGCGGA+AGG	-	chr7_1:63090567-63090586	None:intergenic	70.0%
	ACGGCGGCGGAAGGTCACGG+TGG	-	chr7_1:63090558-63090577	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	63084458	63090616	63084458	ID=Msa1029610;Name=Msa1029610
chr7_1	mRNA	63084458	63090616	63084458	ID=Msa1029610-mRNA-1;Parent=Msa1029610;Name=Msa1029610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=184\|1\|1\|1\|1\|1\|14\|737\|487
chr7_1	exon	63084458	63084696	63084458	ID=Msa1029610-mRNA-1:exon:13635;Parent=Msa1029610-mRNA-1
chr7_1	exon	63084848	63084903	63084848	ID=Msa1029610-mRNA-1:exon:13636;Parent=Msa1029610-mRNA-1
chr7_1	exon	63085059	63085157	63085059	ID=Msa1029610-mRNA-1:exon:13637;Parent=Msa1029610-mRNA-1
chr7_1	exon	63085415	63085474	63085415	ID=Msa1029610-mRNA-1:exon:13638;Parent=Msa1029610-mRNA-1
chr7_1	exon	63086347	63086458	63086347	ID=Msa1029610-mRNA-1:exon:13639;Parent=Msa1029610-mRNA-1
chr7_1	exon	63086534	63086742	63086534	ID=Msa1029610-mRNA-1:exon:13640;Parent=Msa1029610-mRNA-1
chr7_1	exon	63087558	63087686	63087558	ID=Msa1029610-mRNA-1:exon:13641;Parent=Msa1029610-mRNA-1
chr7_1	exon	63088032	63088169	63088032	ID=Msa1029610-mRNA-1:exon:13642;Parent=Msa1029610-mRNA-1
chr7_1	exon	63088304	63088454	63088304	ID=Msa1029610-mRNA-1:exon:13643;Parent=Msa1029610-mRNA-1
chr7_1	exon	63088545	63088627	63088545	ID=Msa1029610-mRNA-1:exon:13644;Parent=Msa1029610-mRNA-1
chr7_1	exon	63089072	63089119	63089072	ID=Msa1029610-mRNA-1:exon:13645;Parent=Msa1029610-mRNA-1
chr7_1	exon	63089371	63089424	63089371	ID=Msa1029610-mRNA-1:exon:13646;Parent=Msa1029610-mRNA-1
chr7_1	exon	63089511	63089594	63089511	ID=Msa1029610-mRNA-1:exon:13647;Parent=Msa1029610-mRNA-1
chr7_1	exon	63089694	63090616	63089694	ID=Msa1029610-mRNA-1:exon:13648;Parent=Msa1029610-mRNA-1
chr7_1	five_prime_UTR	63084458	63084641	63084458	ID=Msa1029610-mRNA-1:five_prime_utr;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63084642	63084696	63084642	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63084848	63084903	63084848	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63085059	63085157	63085059	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63085415	63085474	63085415	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63086347	63086458	63086347	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63086534	63086742	63086534	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63087558	63087686	63087558	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63088032	63088169	63088032	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63088304	63088454	63088304	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63088545	63088627	63088545	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63089072	63089119	63089072	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63089371	63089424	63089371	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63089511	63089594	63089511	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	CDS	63089694	63089879	63089694	ID=Msa1029610-mRNA-1:cds;Parent=Msa1029610-mRNA-1
chr7_1	three_prime_UTR	63089880	63090616	63089880	ID=Msa1029610-mRNA-1:three_prime_utr;Parent=Msa1029610-mRNA-1

Gene Sequence

>Msa1029610

ATGGGTGTGCCTCAAAATGCTCATGATGAAGATGGAACCTTGGAAATCGGAATGGAGTACAGAACTGTTTCTGGGGTTGCTGGACCATTGGTTATTCTTGAAAAAGTTAAGGGACCTAAGTATCAAGAGATCGTTAATATTCGGTTAGGAGATGGAACGACTAGGCGTGGACAAGTTCTAGAAGTTGATGGCGAAAAAGCTGTTGTTCAGGTTTTTGAAGGTACATCTGGGATTGACAATAAATTCACAACTGTGCAATTTACTGGAGAGGTGTTAAAAACTCCTGTATCACTGGACATGCTTGGCCGCATCTTTAACGGTTCAGGAAAACCAATTGACAATGGTCCACCCATATTACCTGAGGCTTACTTGGACATATCAGGAAGTTCTATCAACCCTAGTGAGAGAACCTATCCAGAAGAGATGATTCAGACGGGAATCTCTACAATCGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTTTTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGTCGCCAGGCTGGCTTAGTCAAGCGACTAGAGAAATCTGACAACCTTCTCGAGGGTGGAGAAGACGACAATTTTGCTATTGTGTTTGCAGCCATGGGAGTTAACATGGAGACTGCTCAGTTTTTCAAACGTGACTTTGAAGAGAATGGCTCTATGGAGAGAGTGACCCTTTTCCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATCACTCCTCGTATTGCTCTTACCACTGCTGAATATTTGGCATATGAATGCGGCAAGCATGTTCTTGTGATACTTACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCTGGTAGACGTGGTTATCCCGGTTACATGTATACAGATCTTGCAACAATATATGAGCGTGCTGGAAGAATTGAGGGTCGAAAAGGCTCCATTACGCAAATTCCAATTCTAACCATGCCTAATGATGATATTACGCATCCAACTCCTGATCTTACTGGATATATCACCGAGGGGCAGATATATATTGATAGGCAGTTGCACAACAGACAGATATATCCACCAATCAATGTCCTTCCATCTCTGTCTCGATTAATGAAGAGTGCCATTGGGGAGGGAATGACACGAAGGGATCACTCTGATGTGTCCAACCAGCTCTATGCAAATTATGCTATTGGAAAGGATGTTCAGGCAATGAAAGCCGTGGTCGGAGAAGAAGCACTTTCGTCCGAGGACCTGCTGTATCTGGAATTTCTGGACAAGTTTGAGAGGAAGTTCGTCGCTCAAGGAGCCTATGATACCCGAAACATCTTCCAATCTCTAGATCTTGCATGGACTTTGCTTCGGATTTTCCCTCGGGAGCTTCTTCATCGTATACCGGCAAAGACTCTCGATCAGTACTACAGCCGAGATGCTAGCAATTGA

Protein sequence

>Msa1029610

MGVPQNAHDEDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDASN*