AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1029950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029950 MtrunA17_Chr7g0250631 96.715 761 25 0 1 761 1 761 0.0 1522
Msa1029950 MtrunA17_Chr8g0335351 77.232 773 162 7 1 761 1 771 0.0 1181
Msa1029950 MtrunA17_Chr2g0290691 67.197 503 141 7 270 761 115 604 0.0 684
Msa1029950 MtrunA17_Chr7g0227331 64.694 490 142 7 282 761 150 618 0.0 624
Msa1029950 MtrunA17_Chr6g0449401 58.077 520 159 6 281 761 180 679 0.0 609
Msa1029950 MtrunA17_Chr7g0266031 58.798 466 177 7 259 714 383 843 0.0 551
Msa1029950 MtrunA17_Chr1g0179101 58.599 471 174 9 299 761 402 859 0.0 547
Msa1029950 MtrunA17_Chr2g0309421 58.811 471 163 10 302 761 121 571 0.0 533
Msa1029950 MtrunA17_Chr8g0356291 58.986 434 167 7 334 761 96 524 1.54e-179 524
Msa1029950 MtrunA17_Chr3g0080101 63.104 393 136 4 329 715 380 769 3.82e-178 530
Msa1029950 MtrunA17_Chr4g0063311 53.500 400 162 6 335 714 62 457 5.65e-144 431
Msa1029950 MtrunA17_Chr2g0321101 52.083 384 148 5 344 707 67 434 5.99e-128 389
Msa1029950 MtrunA17_Chr2g0285711 47.332 431 194 6 297 714 15 425 1.58e-124 380
Msa1029950 MtrunA17_Chr8g0381091 48.072 389 172 5 339 714 52 423 2.16e-120 369
Msa1029950 MtrunA17_Chr2g0312641 46.635 416 176 11 311 713 37 419 4.30e-113 351
Msa1029950 MtrunA17_Chr8g0369091 43.396 424 186 6 305 718 528 907 1.52e-110 358
Msa1029950 MtrunA17_Chr4g0030361 43.069 404 182 3 315 717 257 613 2.74e-108 344
Msa1029950 MtrunA17_Chr2g0327561 45.274 402 183 3 327 727 588 953 6.24e-105 343
Msa1029950 MtrunA17_Chr8g0338741 39.481 385 184 11 357 720 11 367 4.91e-78 257
Msa1029950 MtrunA17_Chr4g0032761 38.441 372 199 8 361 714 10 369 5.02e-72 241
Msa1029950 MtrunA17_Chr2g0329011 39.776 357 179 8 360 714 11 333 1.89e-70 236
Msa1029950 MtrunA17_Chr7g0234641 37.166 374 203 10 361 724 8 359 4.62e-67 228
Msa1029950 MtrunA17_Chr6g0478601 34.311 341 180 7 363 702 108 405 9.25e-53 191
Msa1029950 MtrunA17_Chr5g0428981 32.658 395 205 8 309 702 722 1056 1.97e-52 197
Msa1029950 MtrunA17_Chr4g0018201 32.405 395 206 8 309 702 718 1052 3.72e-52 196
Msa1029950 MtrunA17_Chr1g0153321 33.708 356 197 8 354 705 96 416 1.66e-50 185
Msa1029950 MtrunA17_Chr3g0135951 31.043 422 241 14 354 759 82 469 2.06e-50 184
Msa1029950 MtrunA17_Chr1g0187581 32.405 395 218 11 354 738 105 460 1.26e-48 180
Msa1029950 MtrunA17_Chr1g0183651 29.356 419 244 12 354 760 108 486 2.02e-45 171
Msa1029950 MtrunA17_Chr1g0167351 30.809 383 223 9 354 729 98 445 2.70e-45 171
Msa1029950 MtrunA17_Chr7g0261491 29.882 425 239 12 354 760 108 491 3.88e-45 171
Msa1029950 MtrunA17_Chr1g0167311 31.967 366 209 10 354 715 103 432 1.25e-43 165
Msa1029950 MtrunA17_Chr2g0299781 29.517 393 240 8 354 738 101 464 8.44e-42 160
Msa1029950 MtrunA17_Chr1g0197721 33.981 206 131 4 352 556 37 238 1.45e-27 117
Msa1029950 MtrunA17_Chr1g0197721 34.426 122 77 2 593 713 215 334 4.89e-12 68.9
Msa1029950 MtrunA17_Chr7g0245031 38.889 162 91 2 358 513 134 293 1.14e-26 114
Msa1029950 MtrunA17_Chr7g0245031 43.363 113 61 2 591 702 299 409 3.26e-20 94.7
Msa1029950 MtrunA17_Chr4g0059751 37.654 162 88 3 361 513 84 241 2.41e-25 109
Msa1029950 MtrunA17_Chr4g0059751 37.719 114 68 2 591 703 247 358 9.76e-21 95.5
Msa1029950 MtrunA17_Chr8g0351491 25.072 347 174 9 355 698 5 268 1.65e-19 89.4
Msa1029950 MtrunA17_Chr2g0286501 35.393 178 100 5 363 534 46 214 1.33e-18 91.3
Msa1029950 MtrunA17_Chr3g0140631 33.553 152 99 1 363 514 34 183 1.59e-18 87.0
Msa1029950 MtrunA17_Chr3g0140631 34.259 108 67 1 590 697 185 288 4.18e-14 73.9
Msa1029950 MtrunA17_Chr3g0125381 36.607 112 67 1 587 698 100 207 2.16e-18 84.7
Msa1029950 MtrunA17_Chr3g0107011 30.000 190 121 3 360 549 8 185 4.66e-18 87.8
Msa1029950 MtrunA17_Chr4g0013131 33.121 157 102 1 357 513 3 156 7.34e-18 87.4
Msa1029950 MtrunA17_Chr8g0379091 24.847 326 171 7 360 684 20 272 8.88e-17 84.3
Msa1029950 MtrunA17_Chr3g0107051 32.749 171 110 2 366 534 21 188 3.14e-16 82.0
Msa1029950 MtrunA17_Chr5g0432471 31.126 151 101 2 363 513 9 156 3.47e-16 82.0
Msa1029950 MtrunA17_Chr3g0114511 31.953 169 103 3 358 526 24 180 3.67e-16 82.0
Msa1029950 MtrunA17_Chr7g0244521 32.258 155 102 2 359 513 5 156 5.01e-16 81.6
Msa1029950 MtrunA17_Chr8g0353621 31.013 158 107 1 358 515 2 157 7.04e-16 78.6
Msa1029950 MtrunA17_Chr1g0205421 28.351 194 127 3 357 550 3 184 7.45e-16 80.9
Msa1029950 MtrunA17_Chr2g0284031 31.551 187 116 4 360 546 25 199 9.05e-16 80.9
Msa1029950 MtrunA17_Chr6g0486661 32.374 139 86 4 593 726 912 1047 2.32e-15 80.5
Msa1029950 MtrunA17_Chr4g0025671 28.947 152 106 2 363 513 5 155 2.35e-15 80.5
Msa1029950 MtrunA17_Chr2g0321841 28.289 152 107 2 363 513 1 151 2.45e-15 80.5
Msa1029950 MtrunA17_Chr5g0428031 28.994 169 118 2 366 534 9 175 4.06e-15 78.6
Msa1029950 MtrunA17_Chr5g0432491 34.459 148 95 2 366 513 23 168 8.59e-15 77.4
Msa1029950 MtrunA17_Chr1g0188031 32.075 159 92 4 363 513 17 167 9.73e-15 77.4
Msa1029950 MtrunA17_Chr2g0304111 31.081 148 100 1 366 513 23 168 1.24e-14 77.0
Msa1029950 MtrunA17_Chr2g0284011 32.778 180 112 5 359 534 5 179 1.28e-14 77.0
Msa1029950 MtrunA17_Chr8g0346071 27.811 169 120 1 366 534 17 183 1.73e-14 76.6
Msa1029950 MtrunA17_Chr1g0202831 31.613 155 96 3 364 513 409 558 2.15e-14 77.4
Msa1029950 MtrunA17_Chr1g0200601 34.416 154 95 4 365 514 29 180 2.83e-14 76.3
Msa1029950 MtrunA17_Chr7g0272841 32.597 181 105 6 372 544 74 245 2.88e-14 76.6
Msa1029950 MtrunA17_Chr2g0302431 31.788 151 101 2 363 513 17 165 3.32e-14 75.9
Msa1029950 MtrunA17_Chr1g0190831 27.647 170 120 3 363 531 1 168 3.98e-14 76.3
Msa1029950 MtrunA17_Chr4g0001331 31.169 154 103 2 360 513 14 164 4.22e-14 75.5
Msa1029950 MtrunA17_Chr5g0419441 28.743 167 116 2 364 530 237 400 5.30e-14 75.9
Msa1029950 MtrunA17_Chr8g0385341 33.987 153 95 4 366 514 30 180 8.49e-14 74.7
Msa1029950 MtrunA17_Chr1g0173921 26.974 152 109 2 363 513 1 151 9.93e-14 75.5
Msa1029950 MtrunA17_Chr4g0074111 29.891 184 117 5 366 549 18 189 1.22e-13 73.6
Msa1029950 MtrunA17_Chr8g0346081 26.506 166 120 1 366 531 17 180 1.96e-13 73.2
Msa1029950 MtrunA17_Chr3g0091311 26.639 244 161 5 358 593 4 237 3.78e-13 70.5
Msa1029950 MtrunA17_Chr1g0185221 28.235 170 119 3 363 531 1 168 4.12e-13 72.8
Msa1029950 MtrunA17_Chr6g0453681 29.870 154 106 1 360 513 13 164 8.00e-13 71.6
Msa1029950 MtrunA17_Chr4g0063881 27.907 172 122 1 363 534 8 177 8.82e-13 71.2
Msa1029950 MtrunA17_Chr1g0188991 29.319 191 121 6 366 555 15 192 1.02e-12 71.6
Msa1029950 MtrunA17_Chr7g0258051 25.490 153 114 0 363 515 13 165 1.03e-12 71.6
Msa1029950 MtrunA17_Chr3g0091281 30.409 171 105 5 358 526 4 162 1.07e-12 68.6
Msa1029950 MtrunA17_Chr6g0468751 29.870 154 106 1 360 513 13 164 1.10e-12 71.2
Msa1029950 MtrunA17_Chr1g0170551 31.034 145 92 4 596 739 162 299 1.27e-12 72.0
Msa1029950 MtrunA17_Chr7g0260191 25.882 170 123 3 363 531 1 168 1.41e-12 71.2
Msa1029950 MtrunA17_Chr5g0441011 32.099 162 95 5 363 513 1 158 1.48e-12 70.5
Msa1029950 MtrunA17_Chr8g0386981 30.055 183 113 6 372 550 414 585 1.52e-12 71.2
Msa1029950 MtrunA17_Chr4g0074811 36.306 157 86 8 366 514 91 241 1.80e-12 70.5
Msa1029950 MtrunA17_Chr1g0150321 34.459 148 94 2 366 513 13 157 1.94e-12 70.1
Msa1029950 MtrunA17_Chr2g0333821 31.847 157 104 2 357 513 5 158 2.07e-12 70.1
Msa1029950 MtrunA17_Chr8g0345801 34.351 131 79 3 371 499 20 145 2.12e-12 68.2
Msa1029950 MtrunA17_Chr1g0176421 33.121 157 101 4 366 520 161 315 2.36e-12 70.5
Msa1029950 MtrunA17_Chr4g0008561 32.143 140 82 4 560 697 148 276 2.55e-12 70.5
Msa1029950 MtrunA17_Chr3g0132591 36.552 145 82 3 372 515 118 253 3.00e-12 69.7
Msa1029950 MtrunA17_Chr1g0190131 29.677 155 91 4 364 510 7 151 3.92e-12 67.4
Msa1029950 MtrunA17_Chr1g0173541 30.526 190 116 5 338 514 16 202 4.30e-12 69.3
Msa1029950 MtrunA17_Chr5g0448721 30.864 162 108 4 366 525 96 255 4.45e-12 69.3
Msa1029950 MtrunA17_Chr2g0317001 26.374 182 124 3 364 545 13 184 4.70e-12 69.7
Msa1029950 MtrunA17_Chr1g0203881 32.237 152 97 3 366 513 41 190 5.72e-12 68.9
Msa1029950 MtrunA17_Chr7g0274941 29.032 155 105 3 358 510 8 159 5.83e-12 67.4
Msa1029950 MtrunA17_Chr7g0257751 31.875 160 103 3 359 514 51 208 6.65e-12 68.9
Msa1029950 MtrunA17_Chr4g0059951 34.641 153 94 4 366 514 73 223 8.54e-12 68.6
Msa1029950 MtrunA17_Chr4g0000431 30.519 154 103 3 361 513 19 169 9.49e-12 68.6
Msa1029950 MtrunA17_Chr5g0441691 30.000 190 120 5 330 514 37 218 1.23e-11 67.8
Msa1029950 MtrunA17_Chr1g0170281 32.099 162 104 4 366 523 118 277 1.58e-11 67.8
Msa1029950 MtrunA17_Chr3g0131181 35.714 154 91 6 366 514 29 179 1.97e-11 67.4
Msa1029950 MtrunA17_Chr3g0130151 28.750 160 110 2 366 523 244 401 2.04e-11 67.4
Msa1029950 MtrunA17_Chr8g0387671 33.548 155 97 4 364 514 64 216 2.13e-11 67.0
Msa1029950 MtrunA17_Chr3g0132671 27.624 181 99 4 363 513 16 194 3.06e-11 66.6
Msa1029950 MtrunA17_Chr2g0317501 31.792 173 109 6 346 513 112 280 5.18e-11 66.2
Msa1029950 MtrunA17_Chr4g0047191 33.663 101 67 0 413 513 94 194 5.31e-11 65.1
Msa1029950 MtrunA17_Chr7g0267751 32.468 154 96 4 366 514 135 285 5.44e-11 65.9
Msa1029950 MtrunA17_Chr5g0405421 29.605 152 103 2 366 513 99 250 5.78e-11 65.9
Msa1029950 MtrunA17_Chr4g0047211 33.663 101 67 0 413 513 89 189 6.55e-11 64.7
Msa1029950 MtrunA17_Chr2g0286281 33.750 160 95 5 372 526 95 248 6.63e-11 65.5
Msa1029950 MtrunA17_Chr1g0166101 28.571 154 103 3 363 513 21 170 8.26e-11 65.1
Msa1029950 MtrunA17_Chr7g0256001 31.515 165 103 5 363 520 138 299 9.87e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029950 AT2G44830.2 64.721 788 225 24 1 761 4 765 0.0 909
Msa1029950 AT2G44830.3 64.721 788 225 24 1 761 4 765 0.0 909
Msa1029950 AT2G44830.1 64.721 788 225 24 1 761 4 765 0.0 909
Msa1029950 AT5G47750.1 66.536 511 153 6 260 761 85 586 0.0 681
Msa1029950 AT4G26610.1 61.690 509 169 8 255 761 22 506 0.0 622
Msa1029950 AT5G55910.2 64.286 476 151 7 293 761 35 498 0.0 609
Msa1029950 AT5G55910.1 64.286 476 151 7 293 761 35 498 0.0 609
Msa1029950 AT5G40030.1 63.801 442 140 8 325 761 73 499 0.0 587
Msa1029950 AT3G27580.2 63.805 431 146 5 296 718 109 537 0.0 556
Msa1029950 AT3G27580.1 63.805 431 146 5 296 718 109 537 0.0 556
Msa1029950 AT1G79250.1 61.211 446 151 6 334 761 114 555 0.0 547
Msa1029950 AT1G79250.3 61.211 446 151 6 334 761 114 555 0.0 547
Msa1029950 AT1G79250.2 61.211 446 151 6 334 761 114 555 0.0 547
Msa1029950 AT1G79250.4 61.211 446 151 6 334 761 114 555 0.0 547
Msa1029950 AT3G12690.1 59.954 437 164 4 329 761 148 577 0.0 536
Msa1029950 AT3G12690.3 59.954 437 164 4 329 761 148 577 0.0 536
Msa1029950 AT3G12690.2 59.954 437 164 4 329 761 148 577 0.0 536
Msa1029950 AT3G52890.2 58.065 465 169 10 310 761 483 934 4.49e-180 540
Msa1029950 AT3G52890.4 58.065 465 169 10 310 761 483 934 4.49e-180 540
Msa1029950 AT3G52890.1 58.065 465 169 10 310 761 483 934 4.49e-180 540
Msa1029950 AT3G52890.3 58.065 465 169 10 310 761 483 934 4.49e-180 540
Msa1029950 AT1G16440.1 59.859 426 156 6 339 761 86 499 3.28e-177 517
Msa1029950 AT2G36350.1 59.725 437 147 10 337 761 530 949 8.72e-176 529
Msa1029950 AT5G03640.2 58.865 423 155 6 304 714 480 895 1.42e-170 515
Msa1029950 AT5G03640.1 58.865 423 155 6 304 714 480 895 1.42e-170 515
Msa1029950 AT2G26700.1 47.191 445 181 9 322 715 42 483 1.91e-130 398
Msa1029950 AT2G34650.1 50.732 410 164 10 319 714 26 411 4.37e-127 386
Msa1029950 AT3G44610.1 51.351 370 137 6 366 708 71 424 5.93e-124 379
Msa1029950 AT3G14370.1 45.932 381 177 5 341 717 61 416 1.85e-108 339
Msa1029950 AT5G58140.6 46.825 378 157 4 340 717 551 884 6.86e-108 350
Msa1029950 AT5G58140.7 46.825 378 157 4 340 717 551 884 6.86e-108 350
Msa1029950 AT5G58140.5 46.825 378 157 4 340 717 551 884 6.86e-108 350
Msa1029950 AT5G58140.2 46.825 378 157 4 340 717 551 884 6.86e-108 350
Msa1029950 AT5G58140.1 46.825 378 157 4 340 717 551 884 6.86e-108 350
Msa1029950 AT5G58140.3 47.297 370 151 4 340 709 551 876 7.73e-106 345
Msa1029950 AT3G45780.2 45.297 404 178 6 315 717 611 972 5.44e-103 339
Msa1029950 AT3G45780.1 45.297 404 178 6 315 717 611 972 5.44e-103 339
Msa1029950 AT1G53700.1 46.214 383 164 7 341 713 66 416 4.16e-102 323
Msa1029950 AT1G51170.1 38.992 377 194 9 360 724 16 368 6.16e-73 243
Msa1029950 AT4G13000.1 36.164 365 197 8 361 721 15 347 3.59e-69 232
Msa1029950 AT3G20830.1 38.421 380 186 11 361 721 16 366 1.81e-67 229
Msa1029950 AT3G25250.1 37.228 368 189 10 361 716 12 349 6.89e-67 228
Msa1029950 AT1G45160.2 34.358 358 185 6 361 716 665 974 3.97e-54 202
Msa1029950 AT1G45160.1 34.358 358 185 6 361 716 665 974 5.38e-54 202
Msa1029950 AT1G30640.3 31.894 417 246 11 349 760 10 393 1.39e-52 190
Msa1029950 AT1G30640.2 31.894 417 246 11 349 760 103 486 3.12e-52 191
Msa1029950 AT1G30640.1 31.894 417 246 11 349 760 103 486 3.12e-52 191
Msa1029950 AT1G48490.4 34.571 350 178 8 354 702 818 1117 5.93e-51 193
Msa1029950 AT1G48490.3 34.571 350 178 8 354 702 817 1116 6.15e-51 193
Msa1029950 AT1G48490.2 34.571 350 178 8 354 702 817 1116 6.15e-51 193
Msa1029950 AT1G48490.1 34.571 350 178 8 354 702 817 1116 6.15e-51 193
Msa1029950 AT5G62310.1 34.384 349 184 8 355 702 744 1048 2.34e-50 191
Msa1029950 AT3G17850.1 34.571 350 184 9 354 702 871 1176 1.17e-48 186
Msa1029950 AT5G09890.1 32.113 355 200 9 354 702 90 409 1.14e-47 177
Msa1029950 AT5G09890.2 32.113 355 200 9 354 702 90 409 1.22e-47 177
Msa1029950 AT2G20470.3 31.026 419 236 12 354 760 112 489 5.83e-47 176
Msa1029950 AT2G20470.2 31.026 419 236 12 354 760 112 489 1.09e-46 175
Msa1029950 AT2G20470.1 31.026 419 236 12 354 760 112 489 1.09e-46 175
Msa1029950 AT4G33080.2 30.909 385 226 9 354 728 82 436 1.60e-46 174
Msa1029950 AT4G33080.1 30.909 385 226 9 354 728 82 436 2.03e-46 174
Msa1029950 AT1G03920.2 31.354 421 233 13 354 760 12 390 4.42e-46 171
Msa1029950 AT1G03920.1 31.354 421 233 13 354 760 125 503 1.19e-45 172
Msa1029950 AT1G03920.3 31.354 421 233 13 354 760 125 503 1.19e-45 172
Msa1029950 AT3G23310.1 29.639 388 228 10 354 732 108 459 6.44e-44 167
Msa1029950 AT4G14350.2 29.657 408 241 11 335 732 85 456 5.55e-43 164
Msa1029950 AT4G14350.1 29.657 408 241 11 335 732 85 456 5.55e-43 164
Msa1029950 AT4G14350.4 29.657 408 241 11 335 732 85 456 5.55e-43 164
Msa1029950 AT4G14350.3 29.657 408 241 11 335 732 85 456 5.84e-43 164
Msa1029950 AT5G04510.2 29.428 367 192 9 352 716 30 331 5.52e-39 150
Msa1029950 AT3G10540.1 28.395 405 222 10 352 753 31 370 5.72e-39 151
Msa1029950 AT5G04510.1 29.428 367 192 9 352 716 30 331 7.62e-39 151
Msa1029950 AT2G19400.1 29.124 388 230 12 355 729 94 449 1.97e-36 145
Msa1029950 AT5G58140.4 48.855 131 67 0 340 470 551 681 1.82e-32 134
Msa1029950 AT3G08720.1 38.710 155 93 1 359 513 133 285 1.39e-26 114
Msa1029950 AT3G08720.1 45.133 113 58 3 591 702 291 400 1.66e-23 105
Msa1029950 AT3G08720.3 38.710 155 93 1 359 513 133 285 1.39e-26 114
Msa1029950 AT3G08720.3 45.133 113 58 3 591 702 291 400 1.66e-23 105
Msa1029950 AT3G08720.4 38.710 155 93 1 359 513 133 285 1.39e-26 114
Msa1029950 AT3G08720.4 45.133 113 58 3 591 702 291 400 1.66e-23 105
Msa1029950 AT3G08720.2 38.710 155 93 1 359 513 133 285 1.39e-26 114
Msa1029950 AT3G08720.2 45.133 113 58 3 591 702 291 400 1.66e-23 105
Msa1029950 AT3G08730.1 38.065 155 94 1 359 513 127 279 3.13e-26 113
Msa1029950 AT3G08730.1 46.018 113 57 3 591 702 285 394 2.26e-24 107
Msa1029950 AT3G08730.2 38.065 155 94 1 359 513 127 279 3.13e-26 113
Msa1029950 AT3G08730.2 46.018 113 57 3 591 702 285 394 2.26e-24 107
Msa1029950 AT5G04510.3 29.646 226 155 3 331 556 10 231 1.53e-24 105
Msa1029950 AT5G18700.1 37.748 151 86 3 363 513 1 143 4.06e-21 99.8
Msa1029950 AT2G45490.1 24.179 335 174 7 363 697 19 273 1.71e-19 90.1
Msa1029950 AT2G20050.2 36.296 135 77 5 593 721 931 1062 3.37e-18 90.1
Msa1029950 AT2G20050.1 36.296 135 77 5 593 721 934 1065 3.62e-18 90.1
Msa1029950 AT5G57630.2 34.395 157 96 3 359 513 5 156 6.96e-18 87.0
Msa1029950 AT5G57630.1 34.395 157 96 3 359 513 5 156 7.49e-18 87.0
Msa1029950 AT2G45490.2 32.680 153 101 2 363 515 19 169 1.16e-17 84.0
Msa1029950 AT2G25880.1 33.133 166 109 1 349 514 8 171 3.52e-17 83.2
Msa1029950 AT2G25880.1 36.111 108 65 1 590 697 173 276 1.07e-14 75.9
Msa1029950 AT4G24400.1 31.361 169 114 1 366 534 9 175 4.28e-17 85.1
Msa1029950 AT4G24400.2 31.361 169 114 1 366 534 9 175 4.71e-17 84.7
Msa1029950 AT5G45820.1 33.758 157 101 2 357 513 3 156 6.61e-17 84.3
Msa1029950 AT2G25880.4 33.133 166 109 1 349 514 21 184 7.91e-17 82.4
Msa1029950 AT2G25880.4 36.449 107 64 1 590 696 186 288 1.14e-14 75.9
Msa1029950 AT1G12680.1 35.065 154 90 3 370 522 111 255 8.34e-17 84.3
Msa1029950 AT5G45810.1 31.720 186 115 4 361 546 23 196 1.30e-16 84.0
Msa1029950 AT2G25880.3 33.133 166 109 1 349 514 69 232 1.42e-16 82.4
Msa1029950 AT2G25880.3 36.449 107 64 1 590 696 234 336 2.72e-14 75.5
Msa1029950 AT4G32830.1 33.553 152 99 1 363 514 28 177 1.81e-16 81.3
Msa1029950 AT4G32830.1 36.111 108 65 1 590 697 179 282 2.96e-14 74.7
Msa1029950 AT4G18700.1 31.720 186 115 4 361 546 21 194 2.44e-16 83.2
Msa1029950 AT5G25110.1 31.609 174 114 3 363 534 40 210 3.06e-16 82.8
Msa1029950 AT1G29230.1 31.959 194 116 5 355 546 63 242 3.31e-16 82.8
Msa1029950 AT3G04810.2 28.235 170 119 3 363 531 1 168 5.03e-16 82.8
Msa1029950 AT3G04810.1 28.235 170 119 3 363 531 1 168 5.03e-16 82.8
Msa1029950 AT3G04810.3 28.235 170 119 3 363 531 1 168 5.03e-16 82.8
Msa1029950 AT2G25090.1 31.250 192 125 5 357 546 6 192 1.20e-15 80.9
Msa1029950 AT5G10930.1 34.503 171 102 7 366 531 12 177 2.03e-15 80.1
Msa1029950 AT3G44200.2 29.605 152 105 2 363 513 5 155 2.83e-15 80.9
Msa1029950 AT3G44200.1 29.605 152 105 2 363 513 5 155 2.83e-15 80.9
Msa1029950 AT5G28290.1 28.824 170 118 3 363 531 1 168 2.95e-15 80.1
Msa1029950 AT5G28290.2 28.824 170 118 3 363 531 1 168 2.95e-15 80.1
Msa1029950 AT5G28290.3 28.824 170 118 3 363 531 1 168 3.02e-15 80.1
Msa1029950 AT3G01090.3 32.450 151 100 1 363 513 16 164 4.36e-15 79.3
Msa1029950 AT3G01090.1 32.450 151 100 1 363 513 16 164 4.36e-15 79.3
Msa1029950 AT5G01810.1 34.591 159 97 4 357 513 3 156 5.10e-15 78.6
Msa1029950 AT5G01810.2 34.591 159 97 4 357 513 3 156 5.10e-15 78.6
Msa1029950 AT3G01090.2 32.450 151 100 1 363 513 39 187 5.78e-15 79.0
Msa1029950 AT3G06030.1 30.288 208 122 6 346 547 58 248 6.61e-15 79.3
Msa1029950 AT1G35670.1 35.065 154 94 4 365 514 25 176 6.85e-15 78.6
Msa1029950 AT2G25880.2 36.111 108 65 1 590 697 141 244 7.06e-15 75.9
Msa1029950 AT5G01810.3 34.591 159 97 4 357 513 3 156 7.22e-15 77.8
Msa1029950 AT1G54510.4 27.647 170 120 3 363 531 1 168 8.18e-15 79.0
Msa1029950 AT1G54510.2 27.647 170 120 3 363 531 1 168 8.18e-15 79.0
Msa1029950 AT1G54510.1 27.647 170 120 3 363 531 1 168 8.18e-15 79.0
Msa1029950 AT1G54510.3 27.647 170 120 3 363 531 1 168 8.18e-15 79.0
Msa1029950 AT3G17510.1 32.450 151 100 2 363 513 17 165 1.04e-14 77.8
Msa1029950 AT2G34180.1 30.769 195 117 4 355 546 46 225 1.23e-14 77.8
Msa1029950 AT4G40010.1 23.188 345 170 10 363 697 1 260 1.31e-14 76.6
Msa1029950 AT3G63280.2 28.824 170 118 3 363 531 1 168 1.57e-14 77.8
Msa1029950 AT3G63280.3 28.824 170 118 3 363 531 1 168 1.57e-14 77.8
Msa1029950 AT3G63280.1 28.824 170 118 3 363 531 1 168 1.57e-14 77.8
Msa1029950 AT3G29160.3 32.298 161 103 3 357 513 7 165 2.16e-14 75.9
Msa1029950 AT1G01140.2 31.016 187 120 4 347 531 5 184 2.87e-14 76.3
Msa1029950 AT1G01140.1 31.016 187 120 4 347 531 5 184 3.11e-14 76.3
Msa1029950 AT1G01140.3 31.016 187 120 4 347 531 5 184 3.17e-14 76.3
Msa1029950 AT3G63280.4 28.824 170 118 3 363 531 55 222 3.52e-14 76.6
Msa1029950 AT3G29160.1 32.298 161 103 3 357 513 7 165 3.83e-14 76.3
Msa1029950 AT3G29160.2 32.298 161 103 3 357 513 7 165 3.83e-14 76.3
Msa1029950 AT2G30360.1 33.113 151 94 3 366 513 21 167 4.04e-14 75.9
Msa1029950 AT4G14580.1 23.582 335 169 8 359 685 14 269 4.25e-14 75.9
Msa1029950 AT1G30270.1 30.636 173 112 4 363 531 28 196 6.25e-14 75.5
Msa1029950 AT2G26980.3 31.765 170 108 5 366 531 14 179 7.66e-14 75.1
Msa1029950 AT2G26980.1 31.765 170 108 5 366 531 14 179 8.67e-14 74.3
Msa1029950 AT1G69220.1 29.341 167 115 2 364 530 247 410 8.76e-14 75.9
Msa1029950 AT1G30270.2 30.636 173 112 4 363 531 28 196 9.70e-14 74.7
Msa1029950 AT2G26980.4 31.765 170 108 5 366 531 24 189 9.73e-14 74.7
Msa1029950 AT5G21326.1 31.351 185 110 7 363 534 1 181 1.28e-13 74.3
Msa1029950 AT2G26980.2 32.667 150 95 4 366 513 14 159 1.58e-13 72.0
Msa1029950 AT5G35410.2 28.488 172 121 2 363 534 8 177 1.66e-13 73.6
Msa1029950 AT2G26980.5 31.214 173 111 5 363 531 11 179 2.05e-13 73.6
Msa1029950 AT2G41860.1 32.386 176 113 4 343 514 31 204 2.06e-13 73.9
Msa1029950 AT3G20860.1 28.477 151 107 1 363 513 1 150 2.07e-13 73.6
Msa1029950 AT2G41860.2 32.386 176 113 4 343 514 31 204 2.09e-13 73.9
Msa1029950 AT5G39440.1 32.450 151 100 2 363 513 16 164 2.32e-13 73.9
Msa1029950 AT5G39440.1 30.556 144 90 5 599 742 178 311 9.63e-11 65.5
Msa1029950 AT1G53165.3 27.322 183 120 4 363 545 15 184 3.12e-13 73.9
Msa1029950 AT1G53165.1 27.322 183 120 4 363 545 15 184 3.17e-13 73.9
Msa1029950 AT1G53165.2 27.322 183 120 4 363 545 15 184 3.22e-13 73.9
Msa1029950 AT5G35410.1 28.488 172 121 2 363 534 8 177 4.12e-13 72.8
Msa1029950 AT2G38490.1 35.099 151 89 4 366 513 28 172 4.41e-13 72.4
Msa1029950 AT4G35310.2 32.716 162 105 4 366 525 97 256 4.98e-13 72.8
Msa1029950 AT4G35310.1 32.716 162 105 4 366 525 97 256 4.98e-13 72.8
Msa1029950 AT5G58380.1 29.268 164 111 3 370 531 16 176 4.99e-13 72.8
Msa1029950 AT4G09570.1 33.766 154 96 4 365 514 24 175 6.99e-13 72.4
Msa1029950 AT5G12180.1 31.081 222 128 7 305 514 15 223 7.17e-13 72.4
Msa1029950 AT5G01820.1 33.121 157 101 2 357 513 14 166 1.20e-12 71.2
Msa1029950 AT1G63700.1 31.579 152 100 2 364 513 398 547 1.66e-12 71.6
Msa1029950 AT1G63700.2 31.579 152 100 2 364 513 398 547 1.66e-12 71.6
Msa1029950 AT3G23000.1 31.013 158 94 3 363 513 22 171 1.80e-12 70.5
Msa1029950 AT1G53570.7 29.878 164 111 2 362 523 210 371 2.11e-12 70.9
Msa1029950 AT1G53570.6 29.878 164 111 2 362 523 210 371 2.15e-12 70.9
Msa1029950 AT1G50240.3 34.951 103 61 2 596 698 161 257 2.43e-12 71.2
Msa1029950 AT1G50240.2 34.951 103 61 2 596 698 161 257 2.43e-12 71.2
Msa1029950 AT1G53570.1 29.878 164 111 2 362 523 210 371 3.00e-12 70.5
Msa1029950 AT1G53570.4 29.878 164 111 2 362 523 210 371 3.05e-12 70.5
Msa1029950 AT1G53570.2 29.878 164 111 2 362 523 210 371 3.05e-12 70.5
Msa1029950 AT1G53570.3 29.878 164 111 2 362 523 210 371 3.05e-12 70.5
Msa1029950 AT1G50700.3 33.333 153 96 4 366 514 73 223 3.72e-12 69.7
Msa1029950 AT2G17290.1 32.500 160 104 4 366 523 85 242 3.77e-12 70.1
Msa1029950 AT2G17290.2 32.500 160 104 4 366 523 85 242 3.77e-12 70.1
Msa1029950 AT1G48260.1 34.000 150 93 4 366 513 11 156 4.40e-12 69.3
Msa1029950 AT3G61960.1 34.351 131 79 4 371 499 15 140 4.49e-12 70.1
Msa1029950 AT1G54960.1 27.273 165 103 4 354 513 66 218 5.23e-12 69.7
Msa1029950 AT1G54960.2 27.273 165 103 4 354 513 66 218 5.23e-12 69.7
Msa1029950 AT3G61960.2 34.351 131 79 4 371 499 15 140 5.39e-12 69.7
Msa1029950 AT1G50700.1 33.333 153 96 4 366 514 73 223 5.65e-12 69.3
Msa1029950 AT1G09000.2 26.404 178 120 4 372 544 75 246 5.73e-12 69.7
Msa1029950 AT1G09000.1 26.404 178 120 4 372 544 75 246 6.05e-12 69.7
Msa1029950 AT5G19360.1 33.333 156 96 4 364 514 66 218 7.42e-12 68.9
Msa1029950 AT3G45240.3 29.697 165 104 4 358 513 100 261 7.79e-12 68.6
Msa1029950 AT3G10660.2 33.987 153 95 4 366 514 186 336 8.21e-12 69.3
Msa1029950 AT3G10660.1 33.987 153 95 4 366 514 186 336 8.21e-12 69.3
Msa1029950 AT1G69220.2 28.402 169 118 2 362 530 218 383 8.54e-12 69.3
Msa1029950 AT3G45240.2 29.697 165 104 4 358 513 100 261 9.12e-12 68.2
Msa1029950 AT3G45240.1 29.697 165 104 4 358 513 100 261 9.12e-12 68.2
Msa1029950 AT1G50700.2 33.333 153 96 4 366 514 73 223 9.27e-12 68.9
Msa1029950 AT5G23580.1 29.902 204 120 7 343 528 2 200 1.02e-11 68.6
Msa1029950 AT3G57530.2 33.548 155 97 4 364 514 61 213 1.07e-11 68.2
Msa1029950 AT3G20410.2 31.818 154 97 4 366 514 91 241 1.13e-11 68.6
Msa1029950 AT3G20410.1 31.818 154 97 4 366 514 91 241 1.13e-11 68.6
Msa1029950 AT2G35890.2 28.505 214 140 6 311 514 72 282 1.17e-11 68.6
Msa1029950 AT2G35890.1 28.505 214 140 6 311 514 72 282 1.17e-11 68.6
Msa1029950 AT2G38910.1 33.121 157 101 4 366 520 134 288 1.19e-11 68.6
Msa1029950 AT4G24100.1 27.513 189 125 4 366 554 33 209 1.29e-11 68.6
Msa1029950 AT3G57530.1 33.548 155 97 4 364 514 61 213 1.32e-11 68.2
Msa1029950 AT4G04720.2 31.373 153 99 3 366 514 80 230 1.36e-11 68.2
Msa1029950 AT4G04720.1 31.373 153 99 3 366 514 80 230 1.36e-11 68.2
Msa1029950 AT4G24100.2 27.513 189 125 4 366 554 33 209 1.68e-11 68.2
Msa1029950 AT4G24100.4 27.513 189 125 4 366 554 49 225 1.78e-11 68.2
Msa1029950 AT4G30960.1 30.519 154 102 2 362 513 18 168 1.79e-11 67.4
Msa1029950 AT4G24100.3 27.513 189 125 4 366 554 49 225 1.89e-11 68.2
Msa1029950 AT2G17890.1 32.192 146 95 2 372 513 114 259 2.64e-11 67.4
Msa1029950 AT1G73500.1 31.902 163 92 6 369 527 50 197 2.85e-11 65.9
Msa1029950 AT5G04870.1 33.987 153 95 4 366 514 150 300 3.31e-11 67.0
Msa1029950 AT4G10730.2 27.895 190 123 6 366 554 27 203 3.32e-11 67.4
Msa1029950 AT5G18610.1 33.750 160 95 5 372 526 89 242 4.06e-11 66.6
Msa1029950 AT5G18610.2 33.750 160 95 5 372 526 89 242 4.06e-11 66.6
Msa1029950 AT5G18610.3 33.750 160 95 5 372 526 89 242 4.06e-11 66.6
Msa1029950 AT4G10730.1 27.895 190 123 6 366 554 47 223 4.42e-11 67.0
Msa1029950 AT5G12480.1 32.468 154 98 4 365 514 58 209 4.75e-11 66.6
Msa1029950 AT4G36070.1 28.249 177 120 3 341 513 49 222 6.20e-11 66.2
Msa1029950 AT5G19450.2 32.026 153 98 3 366 514 57 207 6.75e-11 65.9
Msa1029950 AT5G19450.1 32.026 153 98 3 366 514 57 207 6.75e-11 65.9
Msa1029950 AT4G14480.1 30.201 149 101 2 366 513 15 161 7.68e-11 65.9
Msa1029950 AT4G36070.2 28.249 177 120 3 341 513 49 222 7.99e-11 65.9
Msa1029950 AT1G32320.1 31.507 146 90 4 369 513 51 187 8.11e-11 64.3
Msa1029950 AT2G07020.1 31.694 183 109 8 362 538 415 587 9.56e-11 65.9

Find 208 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCTAATCAGCTTCTTTC+TGG 0.082275 7_1:+63697098 None:intergenic
CCTTCTCCTTTGATAATTTC+AGG 0.129636 7_1:+63694956 None:intergenic
CCGAGCACGGGATGGAAATT+TGG 0.159585 7_1:-63697247 Msa1029950:CDS
ATTTCCTTTATGTGGTTTAC+TGG 0.197924 7_1:+63697299 None:intergenic
GCGGAGATCTGCATGCTTTA+AGG 0.224664 7_1:-63696966 Msa1029950:CDS
CTTTCTTTGAAGGCGTGAAC+TGG 0.253375 7_1:-63694688 Msa1029950:CDS
CGGATTTCGACCTTTCTCTT+AGG 0.258990 7_1:-63695249 Msa1029950:CDS
TCCATCGGCCTTGGAATTTC+CGG 0.271722 7_1:+63694641 None:intergenic
TCCTCGGACCTTGCCAGTTC+TGG 0.275141 7_1:-63698279 Msa1029950:CDS
GTCAAATGCAAGAATTCTTT+TGG 0.286789 7_1:-63698087 Msa1029950:CDS
GAAATGAAGAAGATAAATAA+TGG 0.309864 7_1:+63699546 None:intergenic
TCAGTTCGAAAATATAGTTT+AGG 0.312856 7_1:-63694370 Msa1029950:three_prime_UTR
AAGAGCAGCAGTGATTCTTT+TGG 0.319984 7_1:-63697936 Msa1029950:CDS
CTCTTCAACATCTCGATATC+AGG 0.320467 7_1:+63697954 None:intergenic
CTGAGGAGAACGATTGCGTT+TGG 0.320798 7_1:-63697599 Msa1029950:CDS
TCAGATTTGTTCTGACCTAT+TGG 0.322338 7_1:+63697831 None:intergenic
CAGTTCGAAAATATAGTTTA+GGG 0.325588 7_1:-63694369 Msa1029950:three_prime_UTR
CGACTTGGTTGTGGTGATAT+TGG 0.329678 7_1:-63697198 Msa1029950:CDS
GGTAATAATGAGATGAAGTC+TGG 0.331322 7_1:-63694542 Msa1029950:CDS
AGATCAGTATCGATAGGTTC+TGG 0.342416 7_1:+63697873 None:intergenic
ATATGTACTCGCACAACTAT+TGG 0.343409 7_1:+63697494 None:intergenic
CTGGAGGCCAGGAGTGTCAT+AGG 0.345563 7_1:+63698128 None:intergenic
GATAGGCCAGGATCAGGTTT+AGG 0.346745 7_1:+63695061 None:intergenic
ATACAGTACAAAGAAGATTA+AGG 0.348974 7_1:+63694477 None:intergenic
TCAGCTTCTTTCTGGCAGAT+AGG 0.356525 7_1:+63697106 None:intergenic
TACGAATCGAAAGATCTTCT+AGG 0.363452 7_1:+63697766 None:intergenic
AAACAGCACCCTTTCTTTGA+AGG 0.368314 7_1:-63694698 Msa1029950:CDS
TGTTTCTCCTGCAGAAAGTA+TGG 0.368553 7_1:-63697715 Msa1029950:CDS
GACCGACAGATTCTCATGTT+TGG 0.379811 7_1:-63697007 Msa1029950:CDS
GCGTGAACTGGGCGTTGATT+AGG 0.386208 7_1:-63694676 Msa1029950:CDS
GCAGTTGATTGGTGGACATT+TGG 0.386364 7_1:-63694923 Msa1029950:CDS
ATTTATCTTCTTCATTTCAA+TGG 0.386942 7_1:-63699541 Msa1029950:intron
CTAGGGTCATTTCCTTTATG+TGG 0.390807 7_1:+63697291 None:intergenic
AAGGGAGATATTGCAGTTGC+TGG 0.395689 7_1:-63697067 Msa1029950:CDS
CGAGCACGGGATGGAAATTT+GGG 0.397667 7_1:-63697246 Msa1029950:CDS
GCATTATGTGACCGTCTTCT+CGG 0.399377 7_1:+63695275 None:intergenic
CAGCTTCTTTCTGGCAGATA+GGG 0.404765 7_1:+63697107 None:intergenic
GGCAAGAGTTCTTTGTGGTC+TGG 0.408624 7_1:+63697975 None:intergenic
ACTGATCCAAGTTCATTTGC+TGG 0.409176 7_1:-63697909 Msa1029950:CDS
CTTCTCCTTTGATAATTTCA+GGG 0.411722 7_1:+63694957 None:intergenic
CGCCATCGTGAGTTCTGATA+AGG 0.413148 7_1:+63695209 None:intergenic
GCCTCAGCGATGACAGCAAC+TGG 0.417899 7_1:-63697341 Msa1029950:CDS
TGAGGAGAACGATTGCGTTT+GGG 0.418380 7_1:-63697598 Msa1029950:CDS
CAGATTCTCATGTTTGGTAA+TGG 0.420632 7_1:-63697001 Msa1029950:CDS
TTCTTTGTGGTCTGGAAAAG+AGG 0.423392 7_1:+63697983 None:intergenic
TTGAAAATACTGTTGGGGTT+GGG 0.424028 7_1:-63694589 Msa1029950:CDS
TTCTTGCACGAGTTATTGTA+TGG 0.426815 7_1:-63694896 Msa1029950:CDS
TTCTAGGAAAGGACCCTTCA+AGG 0.432667 7_1:+63697782 None:intergenic
AGTATTAAAGGAAATGTTAG+AGG 0.433403 7_1:-63697417 Msa1029950:CDS
CCTATCAACTGATTCACTTC+CGG 0.436444 7_1:-63695044 Msa1029950:CDS
AACGAAAAGCACGTCCTTGA+AGG 0.436483 7_1:-63697796 Msa1029950:CDS
GAAGCTGGTCAGAGACTAAC+GGG 0.439517 7_1:-63698221 Msa1029950:CDS
GTAGGCTCAGCAAGAAGTTC+CGG 0.439824 7_1:+63695025 None:intergenic
AAGCCGTTGAAAATACTGTT+GGG 0.451321 7_1:-63694595 Msa1029950:CDS
TCAGATACCTCAACCAGAAC+TGG 0.455441 7_1:+63698266 None:intergenic
CGGTTTCCTGATCCTTTGAA+AGG 0.455687 7_1:+63694866 None:intergenic
CCGGAAGTGAATCAGTTGAT+AGG 0.459794 7_1:+63695044 None:intergenic
GTATACAGCATAGGTAGAAA+TGG 0.462769 7_1:+63697039 None:intergenic
CAGTTCACGCCTTCAAAGAA+AGG 0.463894 7_1:+63694689 None:intergenic
AAATGAAGAAGATAAATAAT+GGG 0.467473 7_1:+63699547 None:intergenic
CATCATCCACCAGAGTTTGA+AGG 0.468686 7_1:+63699602 None:intergenic
TCAGTTGATAGGCCAGGATC+AGG 0.469542 7_1:+63695055 None:intergenic
CAACTGAGCCACTTCTCTAC+TGG 0.471194 7_1:+63698109 None:intergenic
AGAACGGTTTATGTACCAAT+AGG 0.471741 7_1:-63697846 Msa1029950:CDS
ACTCAGGAAACTTGAGCTGC+TGG 0.473429 7_1:+63694819 None:intergenic
AAAACGCCTTTCAAAGGATC+AGG 0.476423 7_1:-63694872 Msa1029950:CDS
TGTTTCACACCTTCAAACTC+TGG 0.477839 7_1:-63699611 Msa1029950:five_prime_UTR
TTTGGTAATGGAGTACTGTC+CGG 0.480641 7_1:-63696989 Msa1029950:CDS
CTAGCACCAGCAAATGAACT+TGG 0.481646 7_1:+63697903 None:intergenic
GACCTTGCCAGTTCTGGTTG+AGG 0.481979 7_1:-63698273 Msa1029950:CDS
CCACTTCTCTACTGGAGGCC+AGG 0.483365 7_1:+63698117 None:intergenic
TCTTCAGCCATACTTTCTGC+AGG 0.483767 7_1:+63697708 None:intergenic
CCAAATTTCCATCCCGTGCT+CGG 0.485772 7_1:+63697247 None:intergenic
GCTTTAAGGCAACGGCAACC+AGG 0.490897 7_1:-63696952 Msa1029950:CDS
AGTGCCAGTAAACCACATAA+AGG 0.492741 7_1:-63697303 Msa1029950:CDS
GAAGATATTCAATTGCCAAC+AGG 0.493493 7_1:+63695347 None:intergenic
GACATCGACCGAGCTGTTGT+AGG 0.498027 7_1:+63695007 None:intergenic
CAATCGTTCTCCTCAGAACC+CGG 0.499443 7_1:+63697606 None:intergenic
TAACTCGTAGCCGGCGACTC+AGG 0.500708 7_1:+63694803 None:intergenic
GATCAGTATCGATAGGTTCT+GGG 0.504925 7_1:+63697874 None:intergenic
AAAGAGCCACAGAACCGTCT+TGG 0.507088 7_1:-63694746 Msa1029950:CDS
TATGGTAAAACGCCTTTCAA+AGG 0.510851 7_1:-63694878 Msa1029950:CDS
GTTGAAAATACTGTTGGGGT+TGG 0.511679 7_1:-63694590 Msa1029950:CDS
TTTCTTTGAAGGCGTGAACT+GGG 0.513612 7_1:-63694687 Msa1029950:CDS
ATTTCCATCCCGTGCTCGGA+CGG 0.518147 7_1:+63697251 None:intergenic
CTATCCTTGCCGTCCGAGCA+CGG 0.521827 7_1:-63697260 Msa1029950:CDS
ACCAATCAACTGCACTTCCA+TGG 0.522469 7_1:+63694933 None:intergenic
TTACTTAGACGACTTGGTTG+TGG 0.525174 7_1:-63697207 Msa1029950:CDS
GGACTGACATTTCCACTTGG+AGG 0.525368 7_1:+63697564 None:intergenic
TTGGTAATGGAGTACTGTCC+GGG 0.526121 7_1:-63696988 Msa1029950:CDS
GCCGATGGAAAATGAACTAC+CGG 0.526635 7_1:-63694627 Msa1029950:CDS
TACTCTGAGAAATGTTTCCC+TGG 0.527525 7_1:+63696934 None:intergenic
GCTACACTGTTCAATGTAGT+TGG 0.527755 7_1:-63694842 Msa1029950:CDS
TATCCTTGCCGTCCGAGCAC+GGG 0.529463 7_1:-63697259 Msa1029950:CDS
GCCATCGTGAGTTCTGATAA+GGG 0.530818 7_1:+63695210 None:intergenic
GAAGCCGTTGAAAATACTGT+TGG 0.532471 7_1:-63694596 Msa1029950:CDS
GGAGAAACAACAGCTAGGAT+TGG 0.533842 7_1:+63697729 None:intergenic
TTCACACCTTCAAACTCTGG+TGG 0.535465 7_1:-63699608 Msa1029950:five_prime_UTR
TGATTAGAGCGCAGACAGAA+AGG 0.536427 7_1:-63697086 Msa1029950:CDS
GATGCACGAGCGCCTGAAAA+CGG 0.537344 7_1:+63697657 None:intergenic
GGTCAGAACAAATCTGAGGC+TGG 0.537400 7_1:-63697825 Msa1029950:CDS
GATTAGAGCGCAGACAGAAA+GGG 0.538191 7_1:-63697085 Msa1029950:CDS
GGATGGCCCTATGACACTCC+TGG 0.538909 7_1:-63698135 Msa1029950:CDS
GCACCTACAAGAACACCAAA+AGG 0.541410 7_1:-63698011 Msa1029950:CDS
GTAATAATGAGATGAAGTCT+GGG 0.543705 7_1:-63694541 Msa1029950:CDS
GCCATGGAAGTGCAGTTGAT+TGG 0.545288 7_1:-63694934 Msa1029950:CDS
AAAGCTGTAATAAGAGAAGC+TGG 0.545303 7_1:-63698236 Msa1029950:CDS
ATCTGCATGCTTTAAGGCAA+CGG 0.545374 7_1:-63696960 Msa1029950:CDS
CGGAAACCTAAACCTGATCC+TGG 0.547070 7_1:-63695067 Msa1029950:CDS
CAAGGATAGCCTTCCACCTA+GGG 0.547090 7_1:+63697274 None:intergenic
GCACACCACCGGAAATTCCA+AGG 0.549582 7_1:-63694649 Msa1029950:CDS
TATCAGGCAAGAGTTCTTTG+TGG 0.555533 7_1:+63697970 None:intergenic
GAACCGTCTTGGAGTGAAGA+GGG 0.556708 7_1:-63694735 Msa1029950:CDS
TTATGCTGCAGAGGTCCTGT+TGG 0.558832 7_1:-63695362 Msa1029950:CDS
TCAACGGCTTCAAATTTAGC+CGG 0.560910 7_1:+63694608 None:intergenic
TGCAATGAAAGTTATGGACA+AGG 0.561915 7_1:-63697133 Msa1029950:CDS
TAATATATTGAGACATGGAA+AGG 0.566992 7_1:-63698322 Msa1029950:exon
TTTAAGTTACTTAGACGACT+TGG 0.567132 7_1:-63697213 Msa1029950:CDS
ATTCTCTTGCTGAAACCGCA+CGG 0.568793 7_1:+63698180 None:intergenic
GGCTGAATGCATACTGATGT+AGG 0.568799 7_1:+63695136 None:intergenic
ATTGAATATCTTCACATGCT+CGG 0.570449 7_1:-63695337 Msa1029950:CDS
ATCGAAAGATCTTCTAGGAA+AGG 0.570967 7_1:+63697771 None:intergenic
GGCGACCCTTCAAAACGAGC+AGG 0.570992 7_1:-63695190 Msa1029950:CDS
AAACAACGCACCTAAGAGAA+AGG 0.572342 7_1:+63695239 None:intergenic
AATAGTAACAAGATGGTTGG+TGG 0.572917 7_1:-63694563 Msa1029950:CDS
ATGGAAGTGCAGTTGATTGG+TGG 0.573036 7_1:-63694931 Msa1029950:CDS
GATTAGGTGCAGCACACCAC+CGG 0.573196 7_1:-63694660 Msa1029950:CDS
GTGGATGATGCTATGAGTTG+AGG 0.575320 7_1:-63699589 Msa1029950:five_prime_UTR
AACGTACTAGTCCGAGAAGA+CGG 0.575392 7_1:-63695286 Msa1029950:CDS
AATATATTGAGACATGGAAA+GGG 0.575783 7_1:-63698321 Msa1029950:exon
TGGATGGAGACACTAGATCA+TGG 0.575970 7_1:+63694313 None:intergenic
GCAAGGATAGCCTTCCACCT+AGG 0.576511 7_1:+63697273 None:intergenic
AGTGAATCAGTTGATAGGCC+AGG 0.577345 7_1:+63695049 None:intergenic
AGTTCACGCCTTCAAAGAAA+GGG 0.578355 7_1:+63694690 None:intergenic
TTCTCCTTTGATAATTTCAG+GGG 0.578576 7_1:+63694958 None:intergenic
ATTATCAAAGGAGAAGGCCA+TGG 0.578961 7_1:-63694950 Msa1029950:CDS
CAGAGACAAAGGTACTTCCT+CGG 0.579272 7_1:-63698295 Msa1029950:CDS
TTCTCTTGCTGAAACCGCAC+GGG 0.579296 7_1:+63698181 None:intergenic
ACCGGAAATTCCAAGGCCGA+TGG 0.580011 7_1:-63694642 Msa1029950:CDS
CCTGAAATTATCAAAGGAGA+AGG 0.580491 7_1:-63694956 Msa1029950:CDS
AGCGATGCATTGACTAGTGA+TGG 0.580747 7_1:-63697468 Msa1029950:CDS
AGCAATAGTAACAAGATGGT+TGG 0.581821 7_1:-63694566 Msa1029950:CDS
CTCGCCCCTGAAATTATCAA+AGG 0.582246 7_1:-63694962 Msa1029950:CDS
CTTTAAGGCAACGGCAACCA+GGG 0.582752 7_1:-63696951 Msa1029950:CDS
TTCACTCCAAGACGGTTCTG+TGG 0.589519 7_1:+63694740 None:intergenic
ACGAAAAGCACGTCCTTGAA+GGG 0.590614 7_1:-63697795 Msa1029950:CDS
AGGAAATGACCCTAGGTGGA+AGG 0.591031 7_1:-63697283 Msa1029950:CDS
AGACGGTCACATAATGCTCT+CGG 0.591494 7_1:-63695269 Msa1029950:CDS
TCAAAATGTGTATACAGCAT+AGG 0.591758 7_1:+63697030 None:intergenic
ACACCGAGTTGCACTCAACT+CGG 0.592368 7_1:+63697161 None:intergenic
AATCGTTCTCCTCAGAACCC+GGG 0.592719 7_1:+63697607 None:intergenic
TGGAGGCCAGGAGTGTCATA+GGG 0.594478 7_1:+63698129 None:intergenic
ATCAGTATCGATAGGTTCTG+GGG 0.594700 7_1:+63697875 None:intergenic
CTTGCCGTCCGAGCACGGGA+TGG 0.594869 7_1:-63697255 Msa1029950:CDS
GATGTAGGCTCGATACAAGC+AGG 0.596432 7_1:+63695151 None:intergenic
ATCGTTCTCCTCAGAACCCG+GGG 0.598420 7_1:+63697608 None:intergenic
GTATTAAAGGAAATGTTAGA+GGG 0.599987 7_1:-63697416 Msa1029950:CDS
CTACATTGAACAGTGTAGCT+CGG 0.601693 7_1:+63694846 None:intergenic
CACCCCTCTTCACTCCAAGA+CGG 0.602730 7_1:+63694732 None:intergenic
ATCGGCCTTGGAATTTCCGG+TGG 0.604088 7_1:+63694644 None:intergenic
AGAAGCTGGTCAGAGACTAA+CGG 0.604574 7_1:-63698222 Msa1029950:CDS
TCTCCGAGTTGAGTGCAACT+CGG 0.605835 7_1:-63697164 Msa1029950:CDS
GATTCTTCTTTGCCTCCAAG+TGG 0.606757 7_1:-63697576 Msa1029950:CDS
GCTCAAGTTTCCTGAGTCGC+CGG 0.607346 7_1:-63694813 Msa1029950:CDS
CTGCAGGAGAAACAACAGCT+AGG 0.608141 7_1:+63697724 None:intergenic
CGGCTTGCATAACTCGTAGC+CGG 0.608900 7_1:+63694794 None:intergenic
ACCAGAACTGGCAAGGTCCG+AGG 0.616384 7_1:+63698278 None:intergenic
GCAAACCTCGGATCAGATCA+CGG 0.617384 7_1:+63694774 None:intergenic
CGATACTGATCTCATGAGAA+CGG 0.617988 7_1:-63697862 Msa1029950:CDS
TGGGAGCAATAGTAACAAGA+TGG 0.618283 7_1:-63694570 Msa1029950:CDS
GGAAAGGGTTGCAGAGACAA+AGG 0.620021 7_1:-63698306 Msa1029950:CDS
CCTGGCCTCCAGTAGAGAAG+TGG 0.620661 7_1:-63698117 Msa1029950:CDS
ACAGCATAGGTAGAAATGGA+TGG 0.626692 7_1:+63697043 None:intergenic
TACCTCAACCAGAACTGGCA+AGG 0.626830 7_1:+63698271 None:intergenic
AAAGCATGCAGATCTCCGCC+CGG 0.630026 7_1:+63696970 None:intergenic
TTGCTGAGCCTACAACAGCT+CGG 0.630073 7_1:-63695015 Msa1029950:CDS
TCGTGAGTTCTGATAAGGGT+AGG 0.631078 7_1:+63695214 None:intergenic
GCTCGGTCGATGTCCTTCGT+TGG 0.631096 7_1:-63694998 Msa1029950:CDS
TATTAAAGGAAATGTTAGAG+GGG 0.632017 7_1:-63697415 Msa1029950:CDS
TGTGGACTGACATTTCCACT+TGG 0.635759 7_1:+63697561 None:intergenic
TCCAGTTGCTGTCATCGCTG+AGG 0.643002 7_1:+63697340 None:intergenic
CTGAGCCACTTCTCTACTGG+AGG 0.643743 7_1:+63698112 None:intergenic
ACGAGCGCCTGAAAACGGTA+AGG 0.643968 7_1:+63697662 None:intergenic
AGAACCGTCTTGGAGTGAAG+AGG 0.649712 7_1:-63694736 Msa1029950:CDS
GCAAGCCGTGATCTGATCCG+AGG 0.650233 7_1:-63694779 Msa1029950:CDS
GCTCATTGTTCTCACAACAC+TGG 0.651462 7_1:+63697521 None:intergenic
ATAAAGGAAATGACCCTAGG+TGG 0.651834 7_1:-63697287 Msa1029950:CDS
CTCATGAGATCAGTATCGAT+AGG 0.652434 7_1:+63697867 None:intergenic
AACCGTCTTGGAGTGAAGAG+GGG 0.657915 7_1:-63694734 Msa1029950:CDS
GTACTATCAACGCTACTGTG+TGG 0.658348 7_1:+63697543 None:intergenic
CACATAAAGGAAATGACCCT+AGG 0.660669 7_1:-63697290 Msa1029950:CDS
GGATGTTTCATGTGCCCGTG+CGG 0.664533 7_1:-63698195 Msa1029950:CDS
TACCAAACATGAGAATCTGT+CGG 0.665055 7_1:+63697005 None:intergenic
ATATGTAATATATTGAGACA+TGG 0.669302 7_1:-63698327 Msa1029950:exon
CTGAAGAATCAAATGACATG+CGG 0.676186 7_1:-63697692 Msa1029950:CDS
AATAGGTCAGAACAAATCTG+AGG 0.679189 7_1:-63697829 Msa1029950:CDS
TCAGTATCGATAGGTTCTGG+GGG 0.696999 7_1:+63697876 None:intergenic
AGCCGTTGAAAATACTGTTG+GGG 0.701235 7_1:-63694594 Msa1029950:CDS
AGTCGAGCAAGTGATAGCAG+TGG 0.705885 7_1:-63697363 Msa1029950:CDS
ATTTCTCAGAGTATGCTGCA+CGG 0.724709 7_1:-63696924 Msa1029950:intron
TAATAATGAGATGAAGTCTG+GGG 0.725716 7_1:-63694540 Msa1029950:CDS
AATAATGAGATGAAGTCTGG+GGG 0.729608 7_1:-63694539 Msa1029950:CDS
ACCCTTATCAGAACTCACGA+TGG 0.733553 7_1:-63695211 Msa1029950:CDS
AAGCTGGTCAGAGACTAACG+GGG 0.740166 7_1:-63698220 Msa1029950:CDS
AGCTGGTCAGAGACTAACGG+GGG 0.762139 7_1:-63698219 Msa1029950:CDS
ATACTCATGAGTACCAACGA+AGG 0.768022 7_1:+63694985 None:intergenic
TCGTTCTCCTCAGAACCCGG+GGG 0.780728 7_1:+63697609 None:intergenic
GTAATGGAGTACTGTCCGGG+CGG 0.782265 7_1:-63696985 Msa1029950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTAATTTTTT+AGG - chr7_1:63698115-63698134 Msa1029950:CDS 0.0%
!!! TATATATGTTTTCATATTTA+TGG - chr7_1:63698556-63698575 Msa1029950:intron 10.0%
!! AAATGAAGAAGATAAATAAT+GGG + chr7_1:63694469-63694488 None:intergenic 15.0%
!!! TTTTTTGTTTTGTTTTGTTA+TGG - chr7_1:63694759-63694778 Msa1029950:CDS 15.0%
!! AAAAATTGTGATAGTATTAA+AGG - chr7_1:63696584-63696603 Msa1029950:intron 15.0%
!! ATTTATTATATCTATATGAC+AGG + chr7_1:63697989-63698008 None:intergenic 15.0%
!!! GAAAAATTAGTTTCTAAATT+GGG - chr7_1:63698260-63698279 Msa1029950:CDS 15.0%
!! ACAATCATGTAATAATTTAT+TGG - chr7_1:63698392-63698411 Msa1029950:intron 15.0%
!! CAATCATGTAATAATTTATT+GGG - chr7_1:63698393-63698412 Msa1029950:intron 15.0%
!! GAAATGAAGAAGATAAATAA+TGG + chr7_1:63694470-63694489 None:intergenic 20.0%
!! ATTTATCTTCTTCATTTCAA+TGG - chr7_1:63694472-63694491 Msa1029950:three_prime_UTR 20.0%
!! TTGAATGTAATCATATATGT+CGG + chr7_1:63694605-63694624 None:intergenic 20.0%
!!! CATTTTTCTTAAATTACTAG+TGG - chr7_1:63694631-63694650 Msa1029950:CDS 20.0%
!!! TATTTTCTTTGAAGTGTTTT+AGG - chr7_1:63694794-63694813 Msa1029950:CDS 20.0%
!!! TCTTATAGCCTTTTTTATTA+GGG - chr7_1:63694889-63694908 Msa1029950:CDS 20.0%
!! AATAAGAACCCTAATAAAAA+AGG + chr7_1:63694900-63694919 None:intergenic 20.0%
!!! CTATGTTGACTAATTTATAA+AGG - chr7_1:63695253-63695272 Msa1029950:CDS 20.0%
!!! AGTTTGGTATTATTTTTTGT+CGG - chr7_1:63695445-63695464 Msa1029950:intron 20.0%
!!! TCTTGTTGATTATTGATAAT+TGG - chr7_1:63695623-63695642 Msa1029950:intron 20.0%
!! ATAATTGGTTATTTATTTGC+AGG - chr7_1:63695638-63695657 Msa1029950:intron 20.0%
!! ATATGTAATATATTGAGACA+TGG - chr7_1:63695686-63695705 Msa1029950:intron 20.0%
!!! TTATTTTGCAATGAAAGTTA+TGG - chr7_1:63696874-63696893 Msa1029950:intron 20.0%
!!! CAAAAAACAAATTTTTGTGA+TGG + chr7_1:63697169-63697188 None:intergenic 20.0%
!! TAAAAGAAAATAAACCAAAG+AGG - chr7_1:63697243-63697262 Msa1029950:CDS 20.0%
!! AAAAGAAAATAAACCAAAGA+GGG - chr7_1:63697244-63697263 Msa1029950:CDS 20.0%
!! TAATATTTAGTGTCTATTTG+AGG + chr7_1:63697337-63697356 None:intergenic 20.0%
!!! AAGTGAAAATATCCTATTTT+TGG - chr7_1:63697898-63697917 Msa1029950:CDS 20.0%
!!! TTTTTCCTTTTTCTTTTATC+AGG + chr7_1:63698246-63698265 None:intergenic 20.0%
!!! GGAAAAATTAGTTTCTAAAT+TGG - chr7_1:63698259-63698278 Msa1029950:CDS 20.0%
!! AATTATTACATGATTGTATG+AGG + chr7_1:63698389-63698408 None:intergenic 20.0%
!!! GTAACAATTTTATATGTAGT+TGG - chr7_1:63698419-63698438 Msa1029950:intron 20.0%
!!! TATATGTAGTTGGTTTTATA+TGG - chr7_1:63698429-63698448 Msa1029950:intron 20.0%
!!! AGTAAATTTTACTATAGATG+AGG - chr7_1:63699572-63699591 Msa1029950:five_prime_UTR 20.0%
! AGAAAAACAAAGTATGAAGA+AGG + chr7_1:63694378-63694397 None:intergenic 25.0%
! AGTTAATAAAAGAGAGATCT+AGG + chr7_1:63694737-63694756 None:intergenic 25.0%
!!! TTTAGGTGATATTTTTGCAA+TGG - chr7_1:63694811-63694830 Msa1029950:CDS 25.0%
!!! TGATATTTTTGCAATGGTAA+TGG - chr7_1:63694817-63694836 Msa1029950:CDS 25.0%
!!! CTCTTATAGCCTTTTTTATT+AGG - chr7_1:63694888-63694907 Msa1029950:CDS 25.0%
!! GTTTCTTATTTCCTTAAAAG+TGG - chr7_1:63694942-63694961 Msa1029950:CDS 25.0%
! TCATAGCATATGTTATGAAA+TGG + chr7_1:63695059-63695078 None:intergenic 25.0%
! AATATGAACTAGAAAAACAC+AGG + chr7_1:63695085-63695104 None:intergenic 25.0%
!!! TCTCTGACATTTTAAAATTG+AGG + chr7_1:63695423-63695442 None:intergenic 25.0%
!!! GTTTGGTATTATTTTTTGTC+GGG - chr7_1:63695446-63695465 Msa1029950:intron 25.0%
!!! TTTGGTATTATTTTTTGTCG+GGG - chr7_1:63695447-63695466 Msa1029950:intron 25.0%
! AAAAGCTAACGTAAAAAGAA+TGG + chr7_1:63695521-63695540 None:intergenic 25.0%
! TAATATATTGAGACATGGAA+AGG - chr7_1:63695691-63695710 Msa1029950:intron 25.0%
! AATATATTGAGACATGGAAA+GGG - chr7_1:63695692-63695711 Msa1029950:intron 25.0%
! AGTATTAAAGGAAATGTTAG+AGG - chr7_1:63696596-63696615 Msa1029950:intron 25.0%
! GTATTAAAGGAAATGTTAGA+GGG - chr7_1:63696597-63696616 Msa1029950:intron 25.0%
! TATTAAAGGAAATGTTAGAG+GGG - chr7_1:63696598-63696617 Msa1029950:intron 25.0%
! TCTTCAAAATTGAAAACGTA+TGG + chr7_1:63697211-63697230 None:intergenic 25.0%
!!! TTCAATTTTGAAGATTTGTC+AGG - chr7_1:63697217-63697236 Msa1029950:CDS 25.0%
! AATGTTCATCTACTTCTTAA+TGG + chr7_1:63697383-63697402 None:intergenic 25.0%
! ATTGCAACAAAATGAAAGTA+AGG + chr7_1:63697590-63697609 None:intergenic 25.0%
!! TAACTTCATTGATTGAGAAT+AGG + chr7_1:63697716-63697735 None:intergenic 25.0%
!!! TCCAATGTAGTAATTTTTAG+TGG - chr7_1:63697765-63697784 Msa1029950:CDS 25.0%
!!! CCAATGTAGTAATTTTTAGT+GGG - chr7_1:63697766-63697785 Msa1029950:CDS 25.0%
!! TATAGTCTACATATTTTCAG+AGG + chr7_1:63697818-63697837 None:intergenic 25.0%
! AATATGTAGACTATAACATG+AGG - chr7_1:63697823-63697842 Msa1029950:CDS 25.0%
!! AAATAGGATATTTTCACTTC+AGG + chr7_1:63697897-63697916 None:intergenic 25.0%
!! TTAATTAAAGTAAAGGTGCA+TGG + chr7_1:63697928-63697947 None:intergenic 25.0%
! CAAGGAAATCAGATATAATA+AGG + chr7_1:63698012-63698031 None:intergenic 25.0%
! CCATTTGATAGAATAAACTT+AGG + chr7_1:63698179-63698198 None:intergenic 25.0%
! CCTAAGTTTATTCTATCAAA+TGG - chr7_1:63698176-63698195 Msa1029950:CDS 25.0%
! TTATTCTATCAAATGGTTGA+AGG - chr7_1:63698183-63698202 Msa1029950:CDS 25.0%
! AGTTTCCTGATAAAAGAAAA+AGG - chr7_1:63698238-63698257 Msa1029950:CDS 25.0%
!!! TGAATAACTGCATATTTTAG+TGG - chr7_1:63698288-63698307 Msa1029950:CDS 25.0%
!! ACAAGGAATTTGATTTAAGT+TGG + chr7_1:63698366-63698385 None:intergenic 25.0%
! GCATGGTTGTTAAAAAAAAT+CGG - chr7_1:63698455-63698474 Msa1029950:intron 25.0%
! CATGGTTGTTAAAAAAAATC+GGG - chr7_1:63698456-63698475 Msa1029950:intron 25.0%
!!! TATTTTAGTCTACACATGAA+AGG + chr7_1:63698607-63698626 None:intergenic 25.0%
!!! TTTTTCTGAGAAAAAAGCTT+CGG + chr7_1:63698916-63698935 None:intergenic 25.0%
! ATACAGTACAAAGAAGATTA+AGG + chr7_1:63699539-63699558 None:intergenic 25.0%
!! ACTATATTTTCGAACTGAAA+AGG + chr7_1:63699641-63699660 None:intergenic 25.0%
! TCAGTTCGAAAATATAGTTT+AGG - chr7_1:63699643-63699662 Msa1029950:five_prime_UTR 25.0%
! CAGTTCGAAAATATAGTTTA+GGG - chr7_1:63699644-63699663 Msa1029950:five_prime_UTR 25.0%
TATCTTCTTCATTTCAATGG+TGG - chr7_1:63694475-63694494 Msa1029950:three_prime_UTR 30.0%
ATCTTCTTCATTTCAATGGT+GGG - chr7_1:63694476-63694495 Msa1029950:three_prime_UTR 30.0%
! ACAACTTTGATCAGAAGTAT+CGG + chr7_1:63694559-63694578 None:intergenic 30.0%
!!! TGTGCTTGTTATTTTCCTTT+TGG - chr7_1:63694708-63694727 Msa1029950:CDS 30.0%
!!! GTGCTTGTTATTTTCCTTTT+GGG - chr7_1:63694709-63694728 Msa1029950:CDS 30.0%
! ATGACATTTCTTGATTTTGC+AGG - chr7_1:63694865-63694884 Msa1029950:CDS 30.0%
! TCTTATTTCCTTAAAAGTGG+AGG - chr7_1:63694945-63694964 Msa1029950:CDS 30.0%
CTTATTTCCTTAAAAGTGGA+GGG - chr7_1:63694946-63694965 Msa1029950:CDS 30.0%
!!! GTTTGTATTTTGAGGTACTA+TGG - chr7_1:63694982-63695001 Msa1029950:CDS 30.0%
! GCTCAAATTATACAAGTTGA+TGG + chr7_1:63695113-63695132 None:intergenic 30.0%
TGATAAAGCTCAAGATACAA+AGG + chr7_1:63695137-63695156 None:intergenic 30.0%
! ATCTTGAGCTTTATCAGTAT+TGG - chr7_1:63695141-63695160 Msa1029950:CDS 30.0%
! TCTTGAGCTTTATCAGTATT+GGG - chr7_1:63695142-63695161 Msa1029950:CDS 30.0%
TTGGGAAATAGATTTACACA+AGG - chr7_1:63695160-63695179 Msa1029950:CDS 30.0%
! AATAAGTCTGGGACTAAATT+GGG + chr7_1:63695382-63695401 None:intergenic 30.0%
! TAATAAGTCTGGGACTAAAT+TGG + chr7_1:63695383-63695402 None:intergenic 30.0%
AGTCCTGTTATAATAAGTCT+GGG + chr7_1:63695393-63695412 None:intergenic 30.0%
TAGTCCTGTTATAATAAGTC+TGG + chr7_1:63695394-63695413 None:intergenic 30.0%
! TAAAATGTCAGAGACTAGTT+TGG - chr7_1:63695429-63695448 Msa1029950:intron 30.0%
! GTCAAATGCAAGAATTCTTT+TGG - chr7_1:63695926-63695945 Msa1029950:intron 30.0%
! ATCTTCTGAAAAACTTGTCT+CGG - chr7_1:63695977-63695996 Msa1029950:intron 30.0%
ATTTCCTTTATGTGGTTTAC+TGG + chr7_1:63696717-63696736 None:intergenic 30.0%
! TTTAAGTTACTTAGACGACT+TGG - chr7_1:63696800-63696819 Msa1029950:intron 30.0%
TCAAAATGTGTATACAGCAT+AGG + chr7_1:63696986-63697005 None:intergenic 30.0%
! ATGCAAGGCATTAAAGAAAT+CGG + chr7_1:63697418-63697437 None:intergenic 30.0%
!!! GACTTGTATGTTTTGACAAT+AGG - chr7_1:63697444-63697463 Msa1029950:CDS 30.0%
!! TAATTTTGAGAAGGAATCAC+AGG + chr7_1:63697500-63697519 None:intergenic 30.0%
!! TTCAATCGCTAATTTTGAGA+AGG + chr7_1:63697509-63697528 None:intergenic 30.0%
TAATGACCACTTTACAAGAA+TGG - chr7_1:63697547-63697566 Msa1029950:CDS 30.0%
TATCTTCCATTCTTGTAAAG+TGG + chr7_1:63697556-63697575 None:intergenic 30.0%
TTTGGTAAGAAGCTATATGT+AGG + chr7_1:63697632-63697651 None:intergenic 30.0%
TACATATAGCTTCTTACCAA+AGG - chr7_1:63697631-63697650 Msa1029950:CDS 30.0%
CCCACTAAAAATTACTACAT+TGG + chr7_1:63697769-63697788 None:intergenic 30.0%
AATAGGAAATTAGTGAACAG+TGG - chr7_1:63697952-63697971 Msa1029950:CDS 30.0%
! CACTATTTTATTACTCAGCA+AGG + chr7_1:63698030-63698049 None:intergenic 30.0%
TAAAGCAATGAGCATTTACT+AGG + chr7_1:63698142-63698161 None:intergenic 30.0%
!! ATTGCTTTAAGAAGTGTATC+TGG - chr7_1:63698153-63698172 Msa1029950:CDS 30.0%
TATCAAATGGTTGAAGGTAA+GGG - chr7_1:63698189-63698208 Msa1029950:CDS 30.0%
!!! TTGGTTTTATATGGAATGCA+TGG - chr7_1:63698438-63698457 Msa1029950:intron 30.0%
! AAATCGGGAGTTGTTTATTT+TGG - chr7_1:63698471-63698490 Msa1029950:intron 30.0%
!! ATTTTGGAAATCTGAAACAG+TGG - chr7_1:63698487-63698506 Msa1029950:intron 30.0%
!! TTTTGGAAATCTGAAACAGT+GGG - chr7_1:63698488-63698507 Msa1029950:intron 30.0%
ATTGAATATCTTCACATGCT+CGG - chr7_1:63698676-63698695 Msa1029950:intron 30.0%
CTCAGAAAAATAAGAAGTCA+CGG - chr7_1:63698926-63698945 Msa1029950:intron 30.0%
! TTCTCCTTTGATAATTTCAG+GGG + chr7_1:63699058-63699077 None:intergenic 30.0%
! CTTCTCCTTTGATAATTTCA+GGG + chr7_1:63699059-63699078 None:intergenic 30.0%
GTAATAATGAGATGAAGTCT+GGG - chr7_1:63699472-63699491 Msa1029950:intron 30.0%
TAATAATGAGATGAAGTCTG+GGG - chr7_1:63699473-63699492 Msa1029950:intron 30.0%
!! GACTTTGAGTTCTTTTAGTT+TGG - chr7_1:63699510-63699529 Msa1029950:intron 30.0%
! GCTCAAAGGTTTGTATTTTG+AGG - chr7_1:63694974-63694993 Msa1029950:CDS 35.0%
!!! TTTTGAGGTACTATGGTTGA+TGG - chr7_1:63694989-63695008 Msa1029950:CDS 35.0%
! TTTGAGGTACTATGGTTGAT+GGG - chr7_1:63694990-63695009 Msa1029950:CDS 35.0%
ATAGATTTACACAAGGCTTG+TGG - chr7_1:63695167-63695186 Msa1029950:CDS 35.0%
! TTTAGAGTGAAGACTCAATG+TGG - chr7_1:63695335-63695354 Msa1029950:CDS 35.0%
AGTCCCAGACTTATTATAAC+AGG - chr7_1:63695387-63695406 Msa1029950:intron 35.0%
! TTTTTGTCGGGGACTAAATT+AGG - chr7_1:63695458-63695477 Msa1029950:intron 35.0%
AAACTGTCAAGGACCAAATT+GGG - chr7_1:63695489-63695508 Msa1029950:intron 35.0%
AACACAGGAAGTTTCATCAA+AGG + chr7_1:63695560-63695579 None:intergenic 35.0%
TACTTGTAACTAGCTAACAC+AGG + chr7_1:63695575-63695594 None:intergenic 35.0%
AAAGCTGTAATAAGAGAAGC+TGG - chr7_1:63695777-63695796 Msa1029950:intron 35.0%
!! GAATCAGTTTTCAAAAGCAC+AGG - chr7_1:63695857-63695876 Msa1029950:intron 35.0%
! CTTTTGGTAAGAGAAGATAC+AGG - chr7_1:63695942-63695961 Msa1029950:intron 35.0%
!!! TTTCCTTTTGGTGTTCTTGT+AGG + chr7_1:63696008-63696027 None:intergenic 35.0%
AGAACGGTTTATGTACCAAT+AGG - chr7_1:63696167-63696186 Msa1029950:intron 35.0%
! TCAGATTTGTTCTGACCTAT+TGG + chr7_1:63696185-63696204 None:intergenic 35.0%
AATAGGTCAGAACAAATCTG+AGG - chr7_1:63696184-63696203 Msa1029950:intron 35.0%
! ATCGAAAGATCTTCTAGGAA+AGG + chr7_1:63696245-63696264 None:intergenic 35.0%
TACGAATCGAAAGATCTTCT+AGG + chr7_1:63696250-63696269 None:intergenic 35.0%
CTGAAGAATCAAATGACATG+CGG - chr7_1:63696321-63696340 Msa1029950:intron 35.0%
ATATGTACTCGCACAACTAT+TGG + chr7_1:63696522-63696541 None:intergenic 35.0%
TGCAATGAAAGTTATGGACA+AGG - chr7_1:63696880-63696899 Msa1029950:intron 35.0%
GTATACAGCATAGGTAGAAA+TGG + chr7_1:63696977-63696996 None:intergenic 35.0%
TACCAAACATGAGAATCTGT+CGG + chr7_1:63697011-63697030 None:intergenic 35.0%
CAGATTCTCATGTTTGGTAA+TGG - chr7_1:63697012-63697031 Msa1029950:CDS 35.0%
! GCTTTTATGATTTCTCACGT+AGG - chr7_1:63697289-63697308 Msa1029950:CDS 35.0%
ATACAAGTCTCATCAATGCA+AGG + chr7_1:63697433-63697452 None:intergenic 35.0%
TTGTTGCAATTTACGCATAG+AGG - chr7_1:63697600-63697619 Msa1029950:CDS 35.0%
AAATGCATGCACATATCAGT+CGG + chr7_1:63697664-63697683 None:intergenic 35.0%
GATCAGAAGCAAGATGAAAA+AGG + chr7_1:63697873-63697892 None:intergenic 35.0%
! ATTAAAGTAAAGGTGCATGG+AGG + chr7_1:63697925-63697944 None:intergenic 35.0%
!! TTTAGTACCTAGTCTTTTGC+AGG - chr7_1:63698061-63698080 Msa1029950:CDS 35.0%
TGTAGTTTGAAGAGCTGAAA+TGG + chr7_1:63698089-63698108 None:intergenic 35.0%
CTATCAAATGGTTGAAGGTA+AGG - chr7_1:63698188-63698207 Msa1029950:CDS 35.0%
TACATGATTGTATGAGGACA+AGG + chr7_1:63698383-63698402 None:intergenic 35.0%
AGTCTACACATGAAAGGAAA+AGG + chr7_1:63698601-63698620 None:intergenic 35.0%
! ATGTAGTTTTTATGCTGCAG+AGG - chr7_1:63698642-63698661 Msa1029950:intron 35.0%
GAAGATATTCAATTGCCAAC+AGG + chr7_1:63698669-63698688 None:intergenic 35.0%
!!! CTAGTACGTTTTCAGGTTTA+AGG + chr7_1:63698717-63698736 None:intergenic 35.0%
AAAAAGCTTCGGCAAAAAAC+AGG + chr7_1:63698905-63698924 None:intergenic 35.0%
! CCTTCTCCTTTGATAATTTC+AGG + chr7_1:63699060-63699079 None:intergenic 35.0%
CCTGAAATTATCAAAGGAGA+AGG - chr7_1:63699057-63699076 Msa1029950:intron 35.0%
TTCTTGCACGAGTTATTGTA+TGG - chr7_1:63699117-63699136 Msa1029950:intron 35.0%
TATGGTAAAACGCCTTTCAA+AGG - chr7_1:63699135-63699154 Msa1029950:intron 35.0%
AAGCCGTTGAAAATACTGTT+GGG - chr7_1:63699418-63699437 Msa1029950:intron 35.0%
! AACCCCAACAGTATTTTCAA+CGG + chr7_1:63699424-63699443 None:intergenic 35.0%
TTGAAAATACTGTTGGGGTT+GGG - chr7_1:63699424-63699443 Msa1029950:intron 35.0%
AGCAATAGTAACAAGATGGT+TGG - chr7_1:63699447-63699466 Msa1029950:intron 35.0%
AATAGTAACAAGATGGTTGG+TGG - chr7_1:63699450-63699469 Msa1029950:intron 35.0%
GGTAATAATGAGATGAAGTC+TGG - chr7_1:63699471-63699490 Msa1029950:intron 35.0%
AATAATGAGATGAAGTCTGG+GGG - chr7_1:63699474-63699493 Msa1029950:intron 35.0%
TGTTTCACACCTTCAAACTC+TGG - chr7_1:63694402-63694421 Msa1029950:three_prime_UTR 40.0%
!! GCAATAACCCTCCACTTTTA+AGG + chr7_1:63694956-63694975 None:intergenic 40.0%
AAACAAGAAGCCATACAGTG+TGG + chr7_1:63695297-63695316 None:intergenic 40.0%
GAAACTGTCAAGGACCAAAT+TGG - chr7_1:63695488-63695507 Msa1029950:intron 40.0%
AGAATGGTGAAGACCCAATT+TGG + chr7_1:63695505-63695524 None:intergenic 40.0%
!! CAGTTTTCAAAAGCACAGGA+TGG - chr7_1:63695861-63695880 Msa1029950:intron 40.0%
! GGAAAAGAGGCTTTTCCTTT+TGG + chr7_1:63696020-63696039 None:intergenic 40.0%
TTCTTTGTGGTCTGGAAAAG+AGG + chr7_1:63696033-63696052 None:intergenic 40.0%
TATCAGGCAAGAGTTCTTTG+TGG + chr7_1:63696046-63696065 None:intergenic 40.0%
CTCTTCAACATCTCGATATC+AGG + chr7_1:63696062-63696081 None:intergenic 40.0%
! AAGAGCAGCAGTGATTCTTT+TGG - chr7_1:63696077-63696096 Msa1029950:intron 40.0%
! AGAGCAGCAGTGATTCTTTT+GGG - chr7_1:63696078-63696097 Msa1029950:intron 40.0%
ACTGATCCAAGTTCATTTGC+TGG - chr7_1:63696104-63696123 Msa1029950:intron 40.0%
!! ATCAGTATCGATAGGTTCTG+GGG + chr7_1:63696141-63696160 None:intergenic 40.0%
!! GATCAGTATCGATAGGTTCT+GGG + chr7_1:63696142-63696161 None:intergenic 40.0%
!! AGATCAGTATCGATAGGTTC+TGG + chr7_1:63696143-63696162 None:intergenic 40.0%
!! CTCATGAGATCAGTATCGAT+AGG + chr7_1:63696149-63696168 None:intergenic 40.0%
CGATACTGATCTCATGAGAA+CGG - chr7_1:63696151-63696170 Msa1029950:intron 40.0%
TGTTTCTCCTGCAGAAAGTA+TGG - chr7_1:63696298-63696317 Msa1029950:intron 40.0%
AGTGCCAGTAAACCACATAA+AGG - chr7_1:63696710-63696729 Msa1029950:intron 40.0%
CTAGGGTCATTTCCTTTATG+TGG + chr7_1:63696725-63696744 None:intergenic 40.0%
CACATAAAGGAAATGACCCT+AGG - chr7_1:63696723-63696742 Msa1029950:intron 40.0%
ATAAAGGAAATGACCCTAGG+TGG - chr7_1:63696726-63696745 Msa1029950:intron 40.0%
!! TTACTTAGACGACTTGGTTG+TGG - chr7_1:63696806-63696825 Msa1029950:intron 40.0%
ACAGCATAGGTAGAAATGGA+TGG + chr7_1:63696973-63696992 None:intergenic 40.0%
!! TTTGGTAATGGAGTACTGTC+CGG - chr7_1:63697024-63697043 Msa1029950:CDS 40.0%
!! ATCTGCATGCTTTAAGGCAA+CGG - chr7_1:63697053-63697072 Msa1029950:CDS 40.0%
! TACTCTGAGAAATGTTTCCC+TGG + chr7_1:63697082-63697101 None:intergenic 40.0%
ATTTCTCAGAGTATGCTGCA+CGG - chr7_1:63697089-63697108 Msa1029950:CDS 40.0%
AAACATCACACTTCCCTCTT+TGG + chr7_1:63697260-63697279 None:intergenic 40.0%
ATCAGTCGGAATCATTCCTT+TGG + chr7_1:63697650-63697669 None:intergenic 40.0%
GACTGATATGTGCATGCATT+TGG - chr7_1:63697663-63697682 Msa1029950:CDS 40.0%
AGTGGGTCCATCAAAAGTTT+AGG - chr7_1:63697783-63697802 Msa1029950:CDS 40.0%
GTGGGTCCATCAAAAGTTTA+GGG - chr7_1:63697784-63697803 Msa1029950:CDS 40.0%
! TCCATCAAAAGTTTAGGGCA+TGG - chr7_1:63697789-63697808 Msa1029950:CDS 40.0%
! ACCATGCCCTAAACTTTTGA+TGG + chr7_1:63697793-63697812 None:intergenic 40.0%
AAACAACGCACCTAAGAGAA+AGG + chr7_1:63698777-63698796 None:intergenic 40.0%
! CCTATCAACTGATTCACTTC+CGG - chr7_1:63698969-63698988 Msa1029950:intron 40.0%
ATACTCATGAGTACCAACGA+AGG + chr7_1:63699031-63699050 None:intergenic 40.0%
ATTATCAAAGGAGAAGGCCA+TGG - chr7_1:63699063-63699082 Msa1029950:intron 40.0%
AAAACGCCTTTCAAAGGATC+AGG - chr7_1:63699141-63699160 Msa1029950:intron 40.0%
CTACATTGAACAGTGTAGCT+CGG + chr7_1:63699170-63699189 None:intergenic 40.0%
GCTACACTGTTCAATGTAGT+TGG - chr7_1:63699171-63699190 Msa1029950:intron 40.0%
AAACAGCACCCTTTCTTTGA+AGG - chr7_1:63699315-63699334 Msa1029950:intron 40.0%
AGTTCACGCCTTCAAAGAAA+GGG + chr7_1:63699326-63699345 None:intergenic 40.0%
! TTTCTTTGAAGGCGTGAACT+GGG - chr7_1:63699326-63699345 Msa1029950:intron 40.0%
TCAACGGCTTCAAATTTAGC+CGG + chr7_1:63699408-63699427 None:intergenic 40.0%
GAAGCCGTTGAAAATACTGT+TGG - chr7_1:63699417-63699436 Msa1029950:intron 40.0%
AGCCGTTGAAAATACTGTTG+GGG - chr7_1:63699419-63699438 Msa1029950:intron 40.0%
GTTGAAAATACTGTTGGGGT+TGG - chr7_1:63699423-63699442 Msa1029950:intron 40.0%
TGGGAGCAATAGTAACAAGA+TGG - chr7_1:63699443-63699462 Msa1029950:intron 40.0%
TTCACACCTTCAAACTCTGG+TGG - chr7_1:63694405-63694424 Msa1029950:three_prime_UTR 45.0%
CATCATCCACCAGAGTTTGA+AGG + chr7_1:63694414-63694433 None:intergenic 45.0%
GTGGATGATGCTATGAGTTG+AGG - chr7_1:63694424-63694443 Msa1029950:three_prime_UTR 45.0%
AGTGGAGGGTTATTGCTCAA+AGG - chr7_1:63694960-63694979 Msa1029950:CDS 45.0%
TACACAAGGCTTGTGGTTGA+TGG - chr7_1:63695174-63695193 Msa1029950:CDS 45.0%
CTTTCAGAAGCCACACTGTA+TGG - chr7_1:63695284-63695303 Msa1029950:CDS 45.0%
!! CAGAGACAAAGGTACTTCCT+CGG - chr7_1:63695718-63695737 Msa1029950:intron 45.0%
TCAGATACCTCAACCAGAAC+TGG + chr7_1:63695750-63695769 None:intergenic 45.0%
AGAAGCTGGTCAGAGACTAA+CGG - chr7_1:63695791-63695810 Msa1029950:intron 45.0%
ATTCTCTTGCTGAAACCGCA+CGG + chr7_1:63695836-63695855 None:intergenic 45.0%
GCACCTACAAGAACACCAAA+AGG - chr7_1:63696002-63696021 Msa1029950:intron 45.0%
! GAGCAGCAGTGATTCTTTTG+GGG - chr7_1:63696079-63696098 Msa1029950:intron 45.0%
CTAGCACCAGCAAATGAACT+TGG + chr7_1:63696113-63696132 None:intergenic 45.0%
!! TCAGTATCGATAGGTTCTGG+GGG + chr7_1:63696140-63696159 None:intergenic 45.0%
! AACGAAAAGCACGTCCTTGA+AGG - chr7_1:63696217-63696236 Msa1029950:intron 45.0%
! ACGAAAAGCACGTCCTTGAA+GGG - chr7_1:63696218-63696237 Msa1029950:intron 45.0%
! TTCTAGGAAAGGACCCTTCA+AGG + chr7_1:63696234-63696253 None:intergenic 45.0%
GGAGAAACAACAGCTAGGAT+TGG + chr7_1:63696287-63696306 None:intergenic 45.0%
TCTTCAGCCATACTTTCTGC+AGG + chr7_1:63696308-63696327 None:intergenic 45.0%
! AACTCAGCCTTACCGTTTTC+AGG - chr7_1:63696344-63696363 Msa1029950:intron 45.0%
TGAGGAGAACGATTGCGTTT+GGG - chr7_1:63696415-63696434 Msa1029950:intron 45.0%
GATTCTTCTTTGCCTCCAAG+TGG - chr7_1:63696437-63696456 Msa1029950:intron 45.0%
! TGTGGACTGACATTTCCACT+TGG + chr7_1:63696455-63696474 None:intergenic 45.0%
GTACTATCAACGCTACTGTG+TGG + chr7_1:63696473-63696492 None:intergenic 45.0%
GCTCATTGTTCTCACAACAC+TGG + chr7_1:63696495-63696514 None:intergenic 45.0%
!! AGCGATGCATTGACTAGTGA+TGG - chr7_1:63696545-63696564 Msa1029950:intron 45.0%
!! CGACTTGGTTGTGGTGATAT+TGG - chr7_1:63696815-63696834 Msa1029950:intron 45.0%
! CAGCTTCTTTCTGGCAGATA+GGG + chr7_1:63696909-63696928 None:intergenic 45.0%
! TCAGCTTCTTTCTGGCAGAT+AGG + chr7_1:63696910-63696929 None:intergenic 45.0%
CGCTCTAATCAGCTTCTTTC+TGG + chr7_1:63696918-63696937 None:intergenic 45.0%
TGATTAGAGCGCAGACAGAA+AGG - chr7_1:63696927-63696946 Msa1029950:CDS 45.0%
GATTAGAGCGCAGACAGAAA+GGG - chr7_1:63696928-63696947 Msa1029950:CDS 45.0%
AAGGGAGATATTGCAGTTGC+TGG - chr7_1:63696946-63696965 Msa1029950:CDS 45.0%
GACCGACAGATTCTCATGTT+TGG - chr7_1:63697006-63697025 Msa1029950:CDS 45.0%
!! TTGGTAATGGAGTACTGTCC+GGG - chr7_1:63697025-63697044 Msa1029950:CDS 45.0%
GTGCATGGAGGACCAAAAAT+AGG + chr7_1:63697913-63697932 None:intergenic 45.0%
AATGGAGCCTGCAAAAGACT+AGG + chr7_1:63698071-63698090 None:intergenic 45.0%
TTGAAGGTAAGGGCTATGCA+AGG - chr7_1:63698199-63698218 Msa1029950:CDS 45.0%
AGGGCTATGCAAGGATGAAA+AGG - chr7_1:63698208-63698227 Msa1029950:CDS 45.0%
GGGCTATGCAAGGATGAAAA+GGG - chr7_1:63698209-63698228 Msa1029950:CDS 45.0%
!!! TCTCGGACTAGTACGTTTTC+AGG + chr7_1:63698724-63698743 None:intergenic 45.0%
AACGTACTAGTCCGAGAAGA+CGG - chr7_1:63698727-63698746 Msa1029950:intron 45.0%
GCATTATGTGACCGTCTTCT+CGG + chr7_1:63698741-63698760 None:intergenic 45.0%
AGACGGTCACATAATGCTCT+CGG - chr7_1:63698744-63698763 Msa1029950:intron 45.0%
CGGATTTCGACCTTTCTCTT+AGG - chr7_1:63698764-63698783 Msa1029950:intron 45.0%
! TCGTGAGTTCTGATAAGGGT+AGG + chr7_1:63698802-63698821 None:intergenic 45.0%
ACCCTTATCAGAACTCACGA+TGG - chr7_1:63698802-63698821 Msa1029950:intron 45.0%
! GCCATCGTGAGTTCTGATAA+GGG + chr7_1:63698806-63698825 None:intergenic 45.0%
!! ATGCACCTGCTCGTTTTGAA+GGG + chr7_1:63698831-63698850 None:intergenic 45.0%
! AATGCACCTGCTCGTTTTGA+AGG + chr7_1:63698832-63698851 None:intergenic 45.0%
GGCTGAATGCATACTGATGT+AGG + chr7_1:63698880-63698899 None:intergenic 45.0%
!! AGTGAATCAGTTGATAGGCC+AGG + chr7_1:63698967-63698986 None:intergenic 45.0%
CCGGAAGTGAATCAGTTGAT+AGG + chr7_1:63698972-63698991 None:intergenic 45.0%
CTCGCCCCTGAAATTATCAA+AGG - chr7_1:63699051-63699070 Msa1029950:intron 45.0%
ACCAATCAACTGCACTTCCA+TGG + chr7_1:63699083-63699102 None:intergenic 45.0%
! ATGGAAGTGCAGTTGATTGG+TGG - chr7_1:63699082-63699101 Msa1029950:intron 45.0%
! GCAGTTGATTGGTGGACATT+TGG - chr7_1:63699090-63699109 Msa1029950:intron 45.0%
CGGTTTCCTGATCCTTTGAA+AGG + chr7_1:63699150-63699169 None:intergenic 45.0%
! GCTCTTTTGCAAGCAAACCT+CGG + chr7_1:63699254-63699273 None:intergenic 45.0%
CAGTTCACGCCTTCAAAGAA+AGG + chr7_1:63699327-63699346 None:intergenic 45.0%
! CTTTCTTTGAAGGCGTGAAC+TGG - chr7_1:63699325-63699344 Msa1029950:intron 45.0%
! AGTTCATTTTCCATCGGCCT+TGG + chr7_1:63699384-63699403 None:intergenic 45.0%
GCCGATGGAAAATGAACTAC+CGG - chr7_1:63699386-63699405 Msa1029950:intron 45.0%
! GCCGGTAGTTCATTTTCCAT+CGG + chr7_1:63699390-63699409 None:intergenic 45.0%
!! ATTAAATTTAATTAAAGTAA+AGG + chr7_1:63697935-63697954 None:intergenic 5.0%
!! TTACTTTAATTAAATTTAAT+AGG - chr7_1:63697935-63697954 Msa1029950:CDS 5.0%
GAGAGATCTAGGCACCCAAA+AGG + chr7_1:63694726-63694745 None:intergenic 50.0%
!! CTATGGTTGATGGGTCAGTG+AGG - chr7_1:63694999-63695018 Msa1029950:CDS 50.0%
GGAAAGGGTTGCAGAGACAA+AGG - chr7_1:63695707-63695726 Msa1029950:intron 50.0%
TACCTCAACCAGAACTGGCA+AGG + chr7_1:63695745-63695764 None:intergenic 50.0%
GAAGCTGGTCAGAGACTAAC+GGG - chr7_1:63695792-63695811 Msa1029950:intron 50.0%
AAGCTGGTCAGAGACTAACG+GGG - chr7_1:63695793-63695812 Msa1029950:intron 50.0%
TTCTCTTGCTGAAACCGCAC+GGG + chr7_1:63695835-63695854 None:intergenic 50.0%
CAACTGAGCCACTTCTCTAC+TGG + chr7_1:63695907-63695926 None:intergenic 50.0%
GGCAAGAGTTCTTTGTGGTC+TGG + chr7_1:63696041-63696060 None:intergenic 50.0%
! GGTCAGAACAAATCTGAGGC+TGG - chr7_1:63696188-63696207 Msa1029950:intron 50.0%
CTGCAGGAGAAACAACAGCT+AGG + chr7_1:63696292-63696311 None:intergenic 50.0%
AATCGTTCTCCTCAGAACCC+GGG + chr7_1:63696409-63696428 None:intergenic 50.0%
CAATCGTTCTCCTCAGAACC+CGG + chr7_1:63696410-63696429 None:intergenic 50.0%
CTGAGGAGAACGATTGCGTT+TGG - chr7_1:63696414-63696433 Msa1029950:intron 50.0%
GGACTGACATTTCCACTTGG+AGG + chr7_1:63696452-63696471 None:intergenic 50.0%
AGTCGAGCAAGTGATAGCAG+TGG - chr7_1:63696650-63696669 Msa1029950:intron 50.0%
AGGAAATGACCCTAGGTGGA+AGG - chr7_1:63696730-63696749 Msa1029950:intron 50.0%
CAAGGATAGCCTTCCACCTA+GGG + chr7_1:63696742-63696761 None:intergenic 50.0%
CCAAATTTCCATCCCGTGCT+CGG + chr7_1:63696769-63696788 None:intergenic 50.0%
CGAGCACGGGATGGAAATTT+GGG - chr7_1:63696767-63696786 Msa1029950:intron 50.0%
! TCTCCGAGTTGAGTGCAACT+CGG - chr7_1:63696849-63696868 Msa1029950:intron 50.0%
ACACCGAGTTGCACTCAACT+CGG + chr7_1:63696855-63696874 None:intergenic 50.0%
GCGGAGATCTGCATGCTTTA+AGG - chr7_1:63697047-63697066 Msa1029950:CDS 50.0%
!! CTTTAAGGCAACGGCAACCA+GGG - chr7_1:63697062-63697081 Msa1029950:CDS 50.0%
TTATGCTGCAGAGGTCCTGT+TGG - chr7_1:63698651-63698670 Msa1029950:intron 50.0%
! CGCCATCGTGAGTTCTGATA+AGG + chr7_1:63698807-63698826 None:intergenic 50.0%
GATGTAGGCTCGATACAAGC+AGG + chr7_1:63698865-63698884 None:intergenic 50.0%
AGCTTCGGCAAAAAACAGGC+AGG + chr7_1:63698901-63698920 None:intergenic 50.0%
CGGAAACCTAAACCTGATCC+TGG - chr7_1:63698946-63698965 Msa1029950:intron 50.0%
GATAGGCCAGGATCAGGTTT+AGG + chr7_1:63698955-63698974 None:intergenic 50.0%
!! TCAGTTGATAGGCCAGGATC+AGG + chr7_1:63698961-63698980 None:intergenic 50.0%
GTAGGCTCAGCAAGAAGTTC+CGG + chr7_1:63698991-63699010 None:intergenic 50.0%
TTGCTGAGCCTACAACAGCT+CGG - chr7_1:63698998-63699017 Msa1029950:intron 50.0%
! GCCATGGAAGTGCAGTTGAT+TGG - chr7_1:63699079-63699098 Msa1029950:intron 50.0%
ACTCAGGAAACTTGAGCTGC+TGG + chr7_1:63699197-63699216 None:intergenic 50.0%
GCAAACCTCGGATCAGATCA+CGG + chr7_1:63699242-63699261 None:intergenic 50.0%
AAAGAGCCACAGAACCGTCT+TGG - chr7_1:63699267-63699286 Msa1029950:intron 50.0%
TTCACTCCAAGACGGTTCTG+TGG + chr7_1:63699276-63699295 None:intergenic 50.0%
AGAACCGTCTTGGAGTGAAG+AGG - chr7_1:63699277-63699296 Msa1029950:intron 50.0%
GAACCGTCTTGGAGTGAAGA+GGG - chr7_1:63699278-63699297 Msa1029950:intron 50.0%
AACCGTCTTGGAGTGAAGAG+GGG - chr7_1:63699279-63699298 Msa1029950:intron 50.0%
TCCATCGGCCTTGGAATTTC+CGG + chr7_1:63699375-63699394 None:intergenic 50.0%
AATGAGATGAAGTCTGGGGG+TGG - chr7_1:63699477-63699496 Msa1029950:intron 50.0%
GGTCCTTGACAGTTTCCACG+CGG + chr7_1:63695484-63695503 None:intergenic 55.0%
! GACCTTGCCAGTTCTGGTTG+AGG - chr7_1:63695740-63695759 Msa1029950:intron 55.0%
AGCTGGTCAGAGACTAACGG+GGG - chr7_1:63695794-63695813 Msa1029950:intron 55.0%
GGATGTTTCATGTGCCCGTG+CGG - chr7_1:63695818-63695837 Msa1029950:intron 55.0%
!! TGGAGGCCAGGAGTGTCATA+GGG + chr7_1:63695887-63695906 None:intergenic 55.0%
CTGAGCCACTTCTCTACTGG+AGG + chr7_1:63695904-63695923 None:intergenic 55.0%
ACGAGCGCCTGAAAACGGTA+AGG + chr7_1:63696354-63696373 None:intergenic 55.0%
GATGCACGAGCGCCTGAAAA+CGG + chr7_1:63696359-63696378 None:intergenic 55.0%
CGGGGGAAGTAGACAGTTCT+CGG + chr7_1:63696390-63696409 None:intergenic 55.0%
CGAGAACTGTCTACTTCCCC+CGG - chr7_1:63696388-63696407 Msa1029950:intron 55.0%
GAGAACTGTCTACTTCCCCC+GGG - chr7_1:63696389-63696408 Msa1029950:intron 55.0%
ATCGTTCTCCTCAGAACCCG+GGG + chr7_1:63696408-63696427 None:intergenic 55.0%
TCCAGTTGCTGTCATCGCTG+AGG + chr7_1:63696676-63696695 None:intergenic 55.0%
GCAAGGATAGCCTTCCACCT+AGG + chr7_1:63696743-63696762 None:intergenic 55.0%
ATTTCCATCCCGTGCTCGGA+CGG + chr7_1:63696765-63696784 None:intergenic 55.0%
CCGAGCACGGGATGGAAATT+TGG - chr7_1:63696766-63696785 Msa1029950:intron 55.0%
!! GTAATGGAGTACTGTCCGGG+CGG - chr7_1:63697028-63697047 Msa1029950:CDS 55.0%
AAAGCATGCAGATCTCCGCC+CGG + chr7_1:63697046-63697065 None:intergenic 55.0%
!! GCTTTAAGGCAACGGCAACC+AGG - chr7_1:63697061-63697080 Msa1029950:CDS 55.0%
TAGGCTCGATACAAGCAGGC+TGG + chr7_1:63698861-63698880 None:intergenic 55.0%
GACATCGACCGAGCTGTTGT+AGG + chr7_1:63699009-63699028 None:intergenic 55.0%
GCTCAAGTTTCCTGAGTCGC+CGG - chr7_1:63699200-63699219 Msa1029950:intron 55.0%
CGGCTTGCATAACTCGTAGC+CGG + chr7_1:63699222-63699241 None:intergenic 55.0%
CACCCCTCTTCACTCCAAGA+CGG + chr7_1:63699284-63699303 None:intergenic 55.0%
!! GCGTGAACTGGGCGTTGATT+AGG - chr7_1:63699337-63699356 Msa1029950:intron 55.0%
GATTAGGTGCAGCACACCAC+CGG - chr7_1:63699353-63699372 Msa1029950:intron 55.0%
GCACACCACCGGAAATTCCA+AGG - chr7_1:63699364-63699383 Msa1029950:intron 55.0%
ATCGGCCTTGGAATTTCCGG+TGG + chr7_1:63699372-63699391 None:intergenic 55.0%
ACCGGAAATTCCAAGGCCGA+TGG - chr7_1:63699371-63699390 Msa1029950:intron 55.0%
GGGGACTAAATTAGGCCGCG+TGG - chr7_1:63695466-63695485 Msa1029950:intron 60.0%
AGGCCGCGTGGAAACTGTCA+AGG - chr7_1:63695478-63695497 Msa1029950:intron 60.0%
TCCTCGGACCTTGCCAGTTC+TGG - chr7_1:63695734-63695753 Msa1029950:intron 60.0%
ACCAGAACTGGCAAGGTCCG+AGG + chr7_1:63695738-63695757 None:intergenic 60.0%
TGGTCAGAGACTAACGGGGG+AGG - chr7_1:63695797-63695816 Msa1029950:intron 60.0%
GGATGGCCCTATGACACTCC+TGG - chr7_1:63695878-63695897 Msa1029950:intron 60.0%
!! CTGGAGGCCAGGAGTGTCAT+AGG + chr7_1:63695888-63695907 None:intergenic 60.0%
CCACTTCTCTACTGGAGGCC+AGG + chr7_1:63695899-63695918 None:intergenic 60.0%
CCTGGCCTCCAGTAGAGAAG+TGG - chr7_1:63695896-63695915 Msa1029950:intron 60.0%
TCTACTTCCCCCGGGTTCTG+AGG - chr7_1:63696397-63696416 Msa1029950:intron 60.0%
TCGTTCTCCTCAGAACCCGG+GGG + chr7_1:63696407-63696426 None:intergenic 60.0%
GCCTCAGCGATGACAGCAAC+TGG - chr7_1:63696672-63696691 Msa1029950:intron 60.0%
CTATCCTTGCCGTCCGAGCA+CGG - chr7_1:63696753-63696772 Msa1029950:intron 60.0%
TATCCTTGCCGTCCGAGCAC+GGG - chr7_1:63696754-63696773 Msa1029950:intron 60.0%
GGCGACCCTTCAAAACGAGC+AGG - chr7_1:63698823-63698842 Msa1029950:intron 60.0%
GCTCGGTCGATGTCCTTCGT+TGG - chr7_1:63699015-63699034 Msa1029950:intron 60.0%
TAACTCGTAGCCGGCGACTC+AGG + chr7_1:63699213-63699232 None:intergenic 60.0%
GCAAGCCGTGATCTGATCCG+AGG - chr7_1:63699234-63699253 Msa1029950:intron 60.0%
CATCCCGTGCTCGGACGGCA+AGG + chr7_1:63696760-63696779 None:intergenic 70.0%
CTTGCCGTCCGAGCACGGGA+TGG - chr7_1:63696758-63696777 Msa1029950:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 63694326 63699709 63694326 ID=Msa1029950;Name=Msa1029950
chr7_1 mRNA 63694326 63699709 63694326 ID=Msa1029950-mRNA-1;Parent=Msa1029950;Name=Msa1029950-mRNA-1;_AED=0.02;_eAED=0.02;_QI=213|1|1|1|0.5|0.33|3|182|761
chr7_1 exon 63694326 63695387 63694326 ID=Msa1029950-mRNA-1:exon:13906;Parent=Msa1029950-mRNA-1
chr7_1 exon 63696925 63698375 63696925 ID=Msa1029950-mRNA-1:exon:13905;Parent=Msa1029950-mRNA-1
chr7_1 exon 63699542 63699709 63699542 ID=Msa1029950-mRNA-1:exon:13904;Parent=Msa1029950-mRNA-1
chr7_1 five_prime_UTR 63699542 63699709 63699542 ID=Msa1029950-mRNA-1:five_prime_utr;Parent=Msa1029950-mRNA-1
chr7_1 five_prime_UTR 63698331 63698375 63698331 ID=Msa1029950-mRNA-1:five_prime_utr;Parent=Msa1029950-mRNA-1
chr7_1 CDS 63696925 63698330 63696925 ID=Msa1029950-mRNA-1:cds;Parent=Msa1029950-mRNA-1
chr7_1 CDS 63694508 63695387 63694508 ID=Msa1029950-mRNA-1:cds;Parent=Msa1029950-mRNA-1
chr7_1 three_prime_UTR 63694326 63694507 63694326 ID=Msa1029950-mRNA-1:three_prime_utr;Parent=Msa1029950-mRNA-1
Gene Sequence

>Msa1029950

ATGGAAAGGGTTGCAGAGACAAAGGTACTTCCTCGGACCTTGCCAGTTCTGGTTGAGGTATCTGATGCACACAAAGCTGTAATAAGAGAAGCTGGTCAGAGACTAACGGGGGAGGATGTTTCATGTGCCCGTGCGGTTTCAGCAAGAGAATTGAATCAGTTTTCAAAAGCACAGGATGGCCCTATGACACTCCTGGCCTCCAGTAGAGAAGTGGCTCAGTTGTCAAATGCAAGAATTCTTTTGGTAAGAGAAGATACAGGATTCAATACGCGATCTTCTGAAAAACTTGTCTCGGCTGCACCTACAAGAACACCAAAAGGAAAAGCCTCTTTTCCAGACCACAAAGAACTCTTGCCTGATATCGAGATGTTGAAGAGCAGCAGTGATTCTTTTGGGGAAACTGATCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTATCGATACTGATCTCATGAGAACGGTTTATGTACCAATAGGTCAGAACAAATCTGAGGCTGGATGCATAACGAAAAGCACGTCCTTGAAGGGTCCTTTCCTAGAAGATCTTTCGATTCGTAATCTCACTAAGAAACCAATCCTAGCTGTTGTTTCTCCTGCAGAAAGTATGGCTGAAGAATCAAATGACATGCGGAACTCAGCCTTACCGTTTTCAGGCGCTCGTGCATCGCAGAATACCGAGAACTGTCTACTTCCCCCGGGTTCTGAGGAGAACGATTGCGTTTGGGATTCTTCTTTGCCTCCAAGTGGAAATGTCAGTCCACACAGTAGCGTTGATAGTACCAGTGTTGTGAGAACAATGAGCATTGCCAATAGTTGTGCGAGTACATATCGCAGCGATGCATTGACTAGTGATGGCATGCTTAGTATAGACAAAAATTGTGATAGTATTAAAGGAAATGTTAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGTAACATCACTGCTAGTGCCAGTAAACCACATAAAGGAAATGACCCTAGGTGGAAGGCTATCCTTGCCGTCCGAGCACGGGATGGAAATTTGGGCATGAGTCATTTTAAGTTACTTAGACGACTTGGTTGTGGTGATATTGGAAGCGTGTATCTCTCCGAGTTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTATCTGCCAGAAAGAAGCTGATTAGAGCGCAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCTATGCTGTATACACATTTTGAGACCGACAGATTCTCATGTTTGGTAATGGAGTACTGTCCGGGCGGAGATCTGCATGCTTTAAGGCAACGGCAACCAGGGAAACATTTCTCAGAGTATGCTGCACGTTTTTATGCTGCAGAGGTCCTGTTGGCAATTGAATATCTTCACATGCTCGGAGTTGTTTATCGAGACCTTAAACCTGAAAACGTACTAGTCCGAGAAGACGGTCACATAATGCTCTCGGATTTCGACCTTTCTCTTAGGTGCGTTGTTTCACCTACCCTTATCAGAACTCACGATGGCGACCCTTCAAAACGAGCAGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACATCAGTATGCATTCAGCCTGCCTGTTTTTTGCCGAAGCTTTTTTCTCAGAAAAATAAGAAGTCACGGAAACCTAAACCTGATCCTGGCCTATCAACTGATTCACTTCCGGAACTTCTTGCTGAGCCTACAACAGCTCGGTCGATGTCCTTCGTTGGTACTCATGAGTATCTCGCCCCTGAAATTATCAAAGGAGAAGGCCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTATTGTATGGTAAAACGCCTTTCAAAGGATCAGGAAACCGAGCTACACTGTTCAATGTAGTTGGCCAGCAGCTCAAGTTTCCTGAGTCGCCGGCTACGAGTTATGCAAGCCGTGATCTGATCCGAGGTTTGCTTGCAAAAGAGCCACAGAACCGTCTTGGAGTGAAGAGGGGTGCAACTGAACTCAAACAGCACCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCGGAAATTCCAAGGCCGATGGAAAATGAACTACCGGCTAAATTTGAAGCCGTTGAAAATACTGTTGGGGTTGGGAGCAATAGTAACAAGATGGTTGGTGGTAATAATGAGATGAAGTCTGGGGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG
Protein sequence

>Msa1029950

MERVAETKVLPRTLPVLVEVSDAHKAVIREAGQRLTGEDVSCARAVSARELNQFSKAQDGPMTLLASSREVAQLSNARILLVREDTGFNTRSSEKLVSAAPTRTPKGKASFPDHKELLPDIEMLKSSSDSFGETDPSSFAGASHPPEPIDTDLMRTVYVPIGQNKSEAGCITKSTSLKGPFLEDLSIRNLTKKPILAVVSPAESMAEESNDMRNSALPFSGARASQNTENCLLPPGSEENDCVWDSSLPPSGNVSPHSSVDSTSVVRTMSIANSCASTYRSDALTSDGMLSIDKNCDSIKGNVRGDSLESAKTSASRASDSSGLSDDSNWSNITASASKPHKGNDPRWKAILAVRARDGNLGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLSARKKLIRAQTEREILQLLDHPFLPMLYTHFETDRFSCLVMEYCPGGDLHALRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGAFCVQPACIEPTSVCIQPACFLPKLFSQKNKKSRKPKPDPGLSTDSLPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLAKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMENELPAKFEAVENTVGVGSNSNKMVGGNNEMKSGGGKYLDFEFF*