Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031800 | XP_003624633.1 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031800 | sp|P28752|TBA1_ORYSJ | 93.333 | 450 | 30 | 0 | 1 | 450 | 1 | 450 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031800 | A2Q5W0 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0573870 | Msa1031800 | 0.821346 | 4.239780e-53 | -8.615850e-47 |
| Msa0578650 | Msa1031800 | 0.828520 | 8.589917e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031800 | MtrunA17_Chr7g0253411 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Msa1031800 | MtrunA17_Chr8g0378821 | 94.713 | 435 | 23 | 0 | 1 | 435 | 1 | 435 | 0.0 | 847 |
| Msa1031800 | MtrunA17_Chr1g0206881 | 89.778 | 450 | 46 | 0 | 1 | 450 | 1 | 450 | 0.0 | 831 |
| Msa1031800 | MtrunA17_Chr3g0140821 | 91.324 | 438 | 38 | 0 | 1 | 438 | 1 | 438 | 0.0 | 823 |
| Msa1031800 | MtrunA17_Chr4g0054511 | 90.888 | 439 | 40 | 0 | 1 | 439 | 1 | 439 | 0.0 | 822 |
| Msa1031800 | MtrunA17_Chr6g0461281 | 87.361 | 451 | 53 | 2 | 1 | 450 | 1 | 448 | 0.0 | 799 |
| Msa1031800 | MtrunA17_Chr2g0300491 | 68.282 | 454 | 133 | 3 | 1 | 448 | 1 | 449 | 0.0 | 622 |
| Msa1031800 | MtrunA17_Chr2g0300671 | 70.737 | 434 | 122 | 2 | 1 | 434 | 1 | 429 | 0.0 | 621 |
| Msa1031800 | MtrunA17_Chr4g0051631 | 41.244 | 434 | 245 | 3 | 1 | 434 | 1 | 424 | 5.14e-124 | 367 |
| Msa1031800 | MtrunA17_Chr4g0008361 | 41.475 | 434 | 244 | 3 | 1 | 434 | 1 | 424 | 2.22e-123 | 366 |
| Msa1031800 | MtrunA17_Chr4g0008401 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 3.82e-123 | 365 |
| Msa1031800 | MtrunA17_Chr7g0255791 | 40.553 | 434 | 248 | 3 | 1 | 434 | 1 | 424 | 1.33e-122 | 364 |
| Msa1031800 | MtrunA17_Chr2g0292921 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.39e-122 | 364 |
| Msa1031800 | MtrunA17_Chr4g0007371 | 40.596 | 436 | 247 | 3 | 1 | 434 | 1 | 426 | 2.41e-122 | 363 |
| Msa1031800 | MtrunA17_Chr1g0203181 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 2.41e-122 | 363 |
| Msa1031800 | MtrunA17_Chr8g0393021 | 40.222 | 450 | 257 | 3 | 1 | 450 | 1 | 438 | 2.64e-122 | 363 |
| Msa1031800 | MtrunA17_Chr3g0142731 | 39.401 | 434 | 255 | 1 | 1 | 434 | 1 | 426 | 2.87e-122 | 363 |
| Msa1031800 | MtrunA17_Chr8g0386781 | 38.902 | 437 | 251 | 3 | 1 | 434 | 1 | 424 | 3.27e-121 | 360 |
| Msa1031800 | MtrunA17_Chr3g0109241 | 87.681 | 138 | 17 | 0 | 268 | 405 | 1 | 138 | 9.10e-89 | 267 |
| Msa1031800 | MtrunA17_Chr7g0275431 | 31.461 | 445 | 284 | 8 | 2 | 433 | 3 | 439 | 2.79e-79 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031800 | AT5G19780.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1031800 | AT5G19770.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1031800 | AT1G64740.1 | 91.954 | 435 | 35 | 0 | 1 | 435 | 1 | 435 | 0.0 | 825 |
| Msa1031800 | AT1G50010.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1031800 | AT1G04820.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1031800 | AT4G14960.2 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 811 |
| Msa1031800 | AT4G14960.1 | 85.504 | 407 | 52 | 1 | 1 | 407 | 1 | 400 | 0.0 | 711 |
| Msa1031800 | AT1G75780.1 | 40.553 | 434 | 249 | 2 | 1 | 434 | 1 | 425 | 1.54e-125 | 372 |
| Msa1031800 | AT5G62690.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1031800 | AT5G62700.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1031800 | AT1G20010.1 | 40.323 | 434 | 250 | 2 | 1 | 434 | 1 | 425 | 1.71e-123 | 367 |
| Msa1031800 | AT5G12250.1 | 40.783 | 434 | 247 | 3 | 1 | 434 | 1 | 424 | 2.24e-123 | 366 |
| Msa1031800 | AT2G29550.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.19e-122 | 365 |
| Msa1031800 | AT4G20890.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.55e-122 | 364 |
| Msa1031800 | AT5G23860.2 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1031800 | AT5G23860.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1031800 | AT5G44340.1 | 40.783 | 434 | 247 | 4 | 1 | 434 | 1 | 424 | 7.98e-120 | 357 |
| Msa1031800 | AT5G05620.1 | 32.135 | 445 | 281 | 8 | 2 | 433 | 3 | 439 | 4.28e-80 | 256 |
| Msa1031800 | AT3G61650.1 | 31.685 | 445 | 283 | 8 | 2 | 433 | 3 | 439 | 6.10e-79 | 253 |
Find 117 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTGAGCAACTAATTTC+TGG | 0.186834 | 7_1:-66531837 | Msa1031800:CDS |
| GGAGGTACTGGTTCTGGTTT+GGG | 0.226735 | 7_1:-66531584 | Msa1031800:CDS |
| GAAAGGTTGTCTGTCGATTA+TGG | 0.254191 | 7_1:-66531548 | Msa1031800:CDS |
| CACTGATGTGGTTGTACTTT+TGG | 0.262817 | 7_1:-66531088 | Msa1031800:CDS |
| TCTGCTCTGCCTGTTGTATC+TGG | 0.273590 | 7_1:-66529943 | Msa1031800:three_prime_UTR |
| TGCTAAGCTCTTCTATGTTT+TGG | 0.274209 | 7_1:-66529869 | Msa1031800:three_prime_UTR |
| TGGAGGTACTGGTTCTGGTT+TGG | 0.290830 | 7_1:-66531585 | Msa1031800:CDS |
| GTTGGTGGAGGTACTGGTTC+TGG | 0.329317 | 7_1:-66531590 | Msa1031800:CDS |
| TGGTTTGGGATCGTTACTTT+TGG | 0.354669 | 7_1:-66531570 | Msa1031800:CDS |
| GCCTTTGCAGAGGATATTAC+AGG | 0.357050 | 7_1:+66530859 | None:intergenic |
| AAGGGCCTTATTTGTTGATC+TGG | 0.363705 | 7_1:-66531910 | Msa1031800:CDS |
| CACTTAGCCATCATACTTGA+TGG | 0.386456 | 7_1:+66530787 | None:intergenic |
| AGGTTCCAGATCAACAAATA+AGG | 0.388259 | 7_1:+66531905 | None:intergenic |
| TTGCCAGAAATTAGTTGCTC+AGG | 0.395167 | 7_1:+66531834 | None:intergenic |
| AATGCTGTTGGTGGAGGTAC+TGG | 0.408533 | 7_1:-66531596 | Msa1031800:CDS |
| ACAGCTGCATTTACATCTTT+AGG | 0.409495 | 7_1:+66530706 | None:intergenic |
| GATATGGAACCAGGTTAGTC+TGG | 0.415527 | 7_1:+66530914 | None:intergenic |
| GAGATAATAAGTATTCATAT+TGG | 0.417940 | 7_1:-66532956 | Msa1031800:CDS |
| ATGAAATGGATACGAGGATA+TGG | 0.420479 | 7_1:+66530898 | None:intergenic |
| TACCATCTATCCTTCTCCTC+AGG | 0.422942 | 7_1:-66531504 | Msa1031800:intron |
| AACACCTTCTTCAGTGAGAC+TGG | 0.429484 | 7_1:-66531951 | Msa1031800:CDS |
| TGGTATCTTCTCCGCGCAAT+TGG | 0.449021 | 7_1:-66529838 | Msa1031800:three_prime_UTR |
| TTCTTCAGTGAGACTGGATC+TGG | 0.452584 | 7_1:-66531945 | Msa1031800:CDS |
| AAAACTGCGTTGGTGATCTC+AGG | 0.454547 | 7_1:+66530814 | None:intergenic |
| CATAAGACGAAAGCATGAAA+TGG | 0.468504 | 7_1:+66530884 | None:intergenic |
| AGTATTCATATTGGACAAGC+TGG | 0.473365 | 7_1:-66532947 | Msa1031800:CDS |
| AGAAACTAATTCCTTGAGTC+GGG | 0.476549 | 7_1:-66529815 | Msa1031800:three_prime_UTR |
| TTGATCTCATGTATGCTAAG+AGG | 0.486229 | 7_1:-66530156 | Msa1031800:CDS |
| CTGGTACCACTGTTGGAGGC+TGG | 0.486551 | 7_1:+66530269 | None:intergenic |
| TCAAGTGGGGAATTCATGTT+GGG | 0.495335 | 7_1:-66532921 | Msa1031800:CDS |
| TTCAAGTGGGGAATTCATGT+TGG | 0.496744 | 7_1:-66532922 | Msa1031800:CDS |
| GATGATGAAGGAATGATGAT+AGG | 0.500017 | 7_1:+66529984 | None:intergenic |
| GTTATCGATGAAGTAAGAAC+TGG | 0.501415 | 7_1:-66531879 | Msa1031800:CDS |
| CATTGCAGTGATACCTCACC+TGG | 0.502593 | 7_1:-66531993 | Msa1031800:intron |
| CGGTTCAAGTTGGTATAAGT+TGG | 0.505038 | 7_1:+66531015 | None:intergenic |
| TACCTGAGGAGAAGGATAGA+TGG | 0.505051 | 7_1:+66531502 | None:intergenic |
| TACCTAGGCATCAATCCATC+AGG | 0.509994 | 7_1:+66532869 | None:intergenic |
| CTTCCTTGACAACTTCCTTG+AGG | 0.511080 | 7_1:-66530972 | Msa1031800:CDS |
| GCATTTGTACATTGGTATGT+TGG | 0.511829 | 7_1:-66530133 | Msa1031800:CDS |
| TCGCCTCCTGGTACCACTGT+TGG | 0.512189 | 7_1:+66530262 | None:intergenic |
| ATTACACAGCCAGATACAAC+AGG | 0.516662 | 7_1:+66529934 | None:intergenic |
| ACAACTTCCTTGAGGTTCGA+CGG | 0.518234 | 7_1:-66530964 | Msa1031800:CDS |
| GAACAGTTCAGTTTGTTGAC+TGG | 0.519065 | 7_1:-66530663 | Msa1031800:intron |
| CTTACTTCATCGATAACAGT+AGG | 0.521441 | 7_1:+66531885 | None:intergenic |
| GACAATTGCACTGGATTGCA+AGG | 0.523031 | 7_1:-66531632 | Msa1031800:CDS |
| ATTCCACACTTGAAACCAGT+TGG | 0.524605 | 7_1:+66530298 | None:intergenic |
| CCTCCTGGTACCACTGTTGG+AGG | 0.526246 | 7_1:+66530265 | None:intergenic |
| CTAAGAGGGCATTTGTACAT+TGG | 0.526456 | 7_1:-66530141 | Msa1031800:CDS |
| ACAAGGAGGAGGAAGTGAAA+AGG | 0.527526 | 7_1:+66533010 | None:intergenic |
| AACCTGATGGATTGATGCCT+AGG | 0.533197 | 7_1:-66532871 | Msa1031800:intron |
| GTGGAAAGAACACTGTTGTA+AGG | 0.534161 | 7_1:+66531129 | None:intergenic |
| AAAGCATCGTGTGCTACGCC+AGG | 0.534949 | 7_1:+66531975 | None:intergenic |
| TGATCTCATGTATGCTAAGA+GGG | 0.535385 | 7_1:-66530155 | Msa1031800:CDS |
| ACAGGAGGTGATGATGATGA+AGG | 0.536884 | 7_1:+66529972 | None:intergenic |
| AGATCCAGTCTCACTGAAGA+AGG | 0.536937 | 7_1:+66531947 | None:intergenic |
| GAGCTTTATTGTCTTGAGCA+TGG | 0.539665 | 7_1:-66532899 | Msa1031800:CDS |
| AGGCAGAGCAGAACAAAGAC+AGG | 0.539669 | 7_1:+66529954 | None:intergenic |
| AAATTAGCAGACAATTGCAC+TGG | 0.540742 | 7_1:-66531641 | Msa1031800:CDS |
| TCCCCTTGCGAAATTATTAG+CGG | 0.544722 | 7_1:+66531803 | None:intergenic |
| AATTGCGCGGAGAAGATACC+AGG | 0.545807 | 7_1:+66529840 | None:intergenic |
| CAGCCTCCAACAGTGGTACC+AGG | 0.546341 | 7_1:-66530268 | Msa1031800:CDS |
| AGAAATCAAACGGTTCAAGT+TGG | 0.546872 | 7_1:+66531005 | None:intergenic |
| TATGAAGAAGTTGGAGCTGA+AGG | 0.548058 | 7_1:-66530046 | Msa1031800:CDS |
| TCTTCTTGAGCACACTGATG+TGG | 0.548393 | 7_1:-66531100 | Msa1031800:CDS |
| AAGAGCAGCAAGATCCTCCC+TGG | 0.548874 | 7_1:+66530078 | None:intergenic |
| GTTGGAGCTGAAGGTGAAGC+TGG | 0.550120 | 7_1:-66530037 | Msa1031800:CDS |
| ATTCTTAATACCTGAGGAGA+AGG | 0.552200 | 7_1:+66531494 | None:intergenic |
| TCCTAGACACGGAAAGTACA+TGG | 0.554265 | 7_1:-66530761 | Msa1031800:CDS |
| AGATAACTTGAGAAATCAAA+CGG | 0.555063 | 7_1:+66530995 | None:intergenic |
| GATTGCACCGTCGAACCTCA+AGG | 0.556970 | 7_1:+66530957 | None:intergenic |
| CCTTTGCAGAGGATATTACA+GGG | 0.558058 | 7_1:+66530860 | None:intergenic |
| ACCTTCGCAAGATCGCCTCC+TGG | 0.558416 | 7_1:+66530250 | None:intergenic |
| TGCCAGAAATTAGTTGCTCA+GGG | 0.563150 | 7_1:+66531835 | None:intergenic |
| TTGGTATGTTGGTGAAGGAA+TGG | 0.563208 | 7_1:-66530122 | Msa1031800:CDS |
| CAACAACACAGCTGTTTCCG+AGG | 0.568785 | 7_1:-66530203 | Msa1031800:CDS |
| GCCATGTACTTTCCGTGTCT+AGG | 0.570873 | 7_1:+66530760 | None:intergenic |
| GAGAAACTAATTCCTTGAGT+CGG | 0.572827 | 7_1:-66529816 | Msa1031800:three_prime_UTR |
| AGATCAACAAATAAGGCCCT+TGG | 0.576663 | 7_1:+66531912 | None:intergenic |
| TACTGAATTCCAGACTAACC+TGG | 0.579785 | 7_1:-66530923 | Msa1031800:CDS |
| CAGGAACTGATATCTGCTCA+TGG | 0.588381 | 7_1:+66530833 | None:intergenic |
| TGTCCAACTGGTTTCAAGTG+TGG | 0.589380 | 7_1:-66530301 | Msa1031800:CDS |
| GAGCATGGAATTCAACCTGA+TGG | 0.591414 | 7_1:-66532884 | Msa1031800:CDS |
| GTACATTGGTATGTTGGTGA+AGG | 0.591423 | 7_1:-66530127 | Msa1031800:CDS |
| GGACAAGCTGGAATTCAAGT+GGG | 0.593353 | 7_1:-66532935 | Msa1031800:CDS |
| GGATACGAGGATATGGAACC+AGG | 0.594253 | 7_1:+66530905 | None:intergenic |
| AAATGAAAATCACAAGGAGG+AGG | 0.595600 | 7_1:+66532999 | None:intergenic |
| ATGCCGCTAATAATTTCGCA+AGG | 0.602014 | 7_1:-66531806 | Msa1031800:CDS |
| GTGCTCAAGAAGAGAATGAG+TGG | 0.604916 | 7_1:+66531110 | None:intergenic |
| ACACAATACTACCCGACTCA+AGG | 0.609142 | 7_1:+66529804 | None:intergenic |
| ATCTGGCAAGCATGTACCAA+GGG | 0.610864 | 7_1:-66531928 | Msa1031800:CDS |
| CCCTGTAATATCCTCTGCAA+AGG | 0.611099 | 7_1:-66530860 | Msa1031800:CDS |
| ACCAGGAGGCGATCTTGCGA+AGG | 0.611647 | 7_1:-66530251 | Msa1031800:CDS |
| TGGACAAGCTGGAATTCAAG+TGG | 0.612580 | 7_1:-66532936 | Msa1031800:CDS |
| GAACCTCAAGGAAGTTGTCA+AGG | 0.614211 | 7_1:+66530969 | None:intergenic |
| CAACTACCAGCCTCCAACAG+TGG | 0.617772 | 7_1:-66530275 | Msa1031800:CDS |
| TGCCGCTAATAATTTCGCAA+GGG | 0.617896 | 7_1:-66531805 | Msa1031800:CDS |
| TTCGCAAGGGGACACTACAC+CGG | 0.617928 | 7_1:-66531792 | Msa1031800:intron |
| GTTGGTGAAGGAATGGAAGA+AGG | 0.620831 | 7_1:-66530115 | Msa1031800:CDS |
| GCCGCTAATAATTTCGCAAG+GGG | 0.622433 | 7_1:-66531804 | Msa1031800:CDS |
| CAGAGCAGAACAAAGACAGG+AGG | 0.630707 | 7_1:+66529957 | None:intergenic |
| AATTAGTTTCTCCAATTGCG+CGG | 0.631786 | 7_1:+66529827 | None:intergenic |
| ATCGTGTGCTACGCCAGGTG+AGG | 0.633117 | 7_1:+66531980 | None:intergenic |
| TGAGCAACTAATTTCTGGCA+AGG | 0.633729 | 7_1:-66531832 | Msa1031800:CDS |
| AACTGATATCTGCTCATGGT+AGG | 0.635921 | 7_1:+66530837 | None:intergenic |
| TGCTGCAAATGAAAATCACA+AGG | 0.641275 | 7_1:+66532993 | None:intergenic |
| CAACATCTCCGCGATACATG+AGG | 0.654917 | 7_1:+66530731 | None:intergenic |
| GACAAGCTGGAATTCAAGTG+GGG | 0.670284 | 7_1:-66532934 | Msa1031800:CDS |
| GATCTGGCAAGCATGTACCA+AGG | 0.671782 | 7_1:-66531929 | Msa1031800:CDS |
| CTCATGGTAGGCCTTTGCAG+AGG | 0.677206 | 7_1:+66530849 | None:intergenic |
| GCATGCTGCCTCATGTATCG+CGG | 0.677664 | 7_1:-66530739 | Msa1031800:CDS |
| ATCAATGCGAGAGAAAACCT+CGG | 0.683525 | 7_1:+66530186 | None:intergenic |
| CTTTGCAGAGGATATTACAG+GGG | 0.699325 | 7_1:+66530861 | None:intergenic |
| CCTCCAACAGTGGTACCAGG+AGG | 0.717379 | 7_1:-66530265 | Msa1031800:CDS |
| GTTCGACGGTGCAATCAACG+TGG | 0.720350 | 7_1:-66530950 | Msa1031800:CDS |
| GAAAGCATGAAATGGATACG+AGG | 0.722207 | 7_1:+66530892 | None:intergenic |
| GCTAAGTGTGATCCTAGACA+CGG | 0.723184 | 7_1:-66530772 | Msa1031800:CDS |
| TGCAAATGAAAATCACAAGG+AGG | 0.735187 | 7_1:+66532996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGGAAATATATAAAATTTT+AGG | + | chr7_1:66530137-66530156 | None:intergenic | 10.0% |
| !! | TATATATCCAAATTAAAAAT+GGG | + | chr7_1:66530357-66530376 | None:intergenic | 10.0% |
| !! | TTATATATCCAAATTAAAAA+TGG | + | chr7_1:66530358-66530377 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGGATATATAAA+AGG | - | chr7_1:66530359-66530378 | Msa1031800:intron | 10.0% |
| !! | TAATCCTAATAATATATATT+AGG | - | chr7_1:66531561-66531580 | Msa1031800:CDS | 10.0% |
| !! | AAATCCTAATATATATTATT+AGG | + | chr7_1:66531568-66531587 | None:intergenic | 10.0% |
| !! | TCATTAATCAAGTTTAATAA+TGG | + | chr7_1:66530580-66530599 | None:intergenic | 15.0% |
| !! | ATTAAACTTGATTAATGATT+AGG | - | chr7_1:66530582-66530601 | Msa1031800:intron | 15.0% |
| !! | AAAAATCATTAGATATAGAA+AGG | - | chr7_1:66531736-66531755 | Msa1031800:intron | 15.0% |
| !! | GAGATAATAAGTATTCATAT+TGG | - | chr7_1:66529818-66529837 | Msa1031800:three_prime_UTR | 20.0% |
| !! | TCATAAATAGTTGACATATA+TGG | - | chr7_1:66530307-66530326 | Msa1031800:intron | 20.0% |
| !! | GTTGATCTTAAATTAGTATA+AGG | - | chr7_1:66530329-66530348 | Msa1031800:intron | 20.0% |
| !! | ATATATATTATGTAGACCAA+GGG | - | chr7_1:66530403-66530422 | Msa1031800:intron | 20.0% |
| !!! | TGGAATTTTTAACTCATATA+TGG | - | chr7_1:66530718-66530737 | Msa1031800:CDS | 20.0% |
| !! | AATGTAACAAATAACAAAGT+AGG | + | chr7_1:66531347-66531366 | None:intergenic | 20.0% |
| !!! | AACAATACCTTTTAATATGT+AGG | - | chr7_1:66531602-66531621 | Msa1031800:CDS | 20.0% |
| !!! | TATAATTGCTTTATTCTCAT+AGG | - | chr7_1:66532332-66532351 | Msa1031800:intron | 20.0% |
| !!! | ATAATTGCTTTATTCTCATA+GGG | - | chr7_1:66532333-66532352 | Msa1031800:intron | 20.0% |
| !!! | CAAACTGTTTTTTTAGTAAT+AGG | + | chr7_1:66532424-66532443 | None:intergenic | 20.0% |
| !! | AGAAACATTCTTAAAAATAG+TGG | + | chr7_1:66532879-66532898 | None:intergenic | 20.0% |
| !! | TCATATAAAAAAGTGTACCT+AGG | + | chr7_1:66529923-66529942 | None:intergenic | 25.0% |
| ! | CTTGTTTACATTAATTGTAG+TGG | - | chr7_1:66529964-66529983 | Msa1031800:three_prime_UTR | 25.0% |
| ! | AAAAATAGAAAAAACCCAGA+AGG | + | chr7_1:66530166-66530185 | None:intergenic | 25.0% |
| !!! | TTCTGGGTTTTTTCTATTTT+TGG | - | chr7_1:66530165-66530184 | Msa1031800:CDS | 25.0% |
| !!! | ATTTTTGGTGTTTTCATTTC+TGG | - | chr7_1:66530180-66530199 | Msa1031800:CDS | 25.0% |
| !!! | TTTTTGGTGTTTTCATTTCT+GGG | - | chr7_1:66530181-66530200 | Msa1031800:CDS | 25.0% |
| !!! | CTATTTTTGCATGATAAGAA+TGG | + | chr7_1:66530286-66530305 | None:intergenic | 25.0% |
| !!! | TAAGGATCCCATTTTTAATT+TGG | - | chr7_1:66530347-66530366 | Msa1031800:intron | 25.0% |
| ! | GATATATATTATGTAGACCA+AGG | - | chr7_1:66530402-66530421 | Msa1031800:intron | 25.0% |
| !!! | ATGTTTCTAGTTTTCCAATT+TGG | + | chr7_1:66530499-66530518 | None:intergenic | 25.0% |
| !!! | ATGATTGATTTTCTTGAGTT+TGG | - | chr7_1:66530660-66530679 | Msa1031800:intron | 25.0% |
| !!! | TTTGGACTTTTTAACTCATA+AGG | - | chr7_1:66530641-66530660 | Msa1031800:intron | 25.0% |
| !!! | AGGTTGATTTGTTTTATGTT+TGG | - | chr7_1:66530698-66530717 | Msa1031800:CDS | 25.0% |
| !!! | TTTTTTGTTTTCAATGCTGT+TGG | - | chr7_1:66531166-66531185 | Msa1031800:intron | 25.0% |
| ! | CATAGAATCACAAATTTAAC+AGG | + | chr7_1:66531464-66531483 | None:intergenic | 25.0% |
| ! | GTAGATACCTACATATTAAA+AGG | + | chr7_1:66531612-66531631 | None:intergenic | 25.0% |
| ! | AGATAACTTGAGAAATCAAA+CGG | + | chr7_1:66531782-66531801 | None:intergenic | 25.0% |
| ! | TTCCTTGAAATATCACATTA+TGG | - | chr7_1:66532149-66532168 | Msa1031800:intron | 25.0% |
| ! | AACCATAATGTGATATTTCA+AGG | + | chr7_1:66532154-66532173 | None:intergenic | 25.0% |
| !! | TAATTGCTTTATTCTCATAG+GGG | - | chr7_1:66532334-66532353 | Msa1031800:intron | 25.0% |
| !! | ACATTCTTAAAAATAGTGGA+GGG | + | chr7_1:66532875-66532894 | None:intergenic | 25.0% |
| ! | AACATTCTTAAAAATAGTGG+AGG | + | chr7_1:66532876-66532895 | None:intergenic | 25.0% |
| ! | ATGATGAAAAAAAATGGTCT+CGG | + | chr7_1:66533035-66533054 | None:intergenic | 25.0% |
| TATTTCCTAATAGTTCCTTC+TGG | - | chr7_1:66530148-66530167 | Msa1031800:CDS | 30.0% | |
| ATTTCCTAATAGTTCCTTCT+GGG | - | chr7_1:66530149-66530168 | Msa1031800:CDS | 30.0% | |
| ! | TTTTTGCATGATAAGAATGG+AGG | + | chr7_1:66530283-66530302 | None:intergenic | 30.0% |
| CTAGAAACATCTCTTCAATT+TGG | - | chr7_1:66530509-66530528 | Msa1031800:intron | 30.0% | |
| TAACTCATATATGGTTGATC+AGG | - | chr7_1:66530727-66530746 | Msa1031800:CDS | 30.0% | |
| ! | TGTCTGCTAATTTTCTGATA+CGG | + | chr7_1:66531126-66531145 | None:intergenic | 30.0% |
| TATGGCAAAAAGTCTAAACT+TGG | - | chr7_1:66531244-66531263 | Msa1031800:intron | 30.0% | |
| CTGTATGCGTTAATAAATAG+AGG | + | chr7_1:66531509-66531528 | None:intergenic | 30.0% | |
| !! | TCTAGATAGTTTAACTTGCA+AGG | + | chr7_1:66532202-66532221 | None:intergenic | 30.0% |
| ! | AGTGCTGAAATTATGCAATT+TGG | - | chr7_1:66532230-66532249 | Msa1031800:intron | 30.0% |
| TTTAGTAATAGGCGAAAGAA+TGG | + | chr7_1:66532413-66532432 | None:intergenic | 30.0% | |
| !! | TGATATTGGTGACTATTTTC+AGG | - | chr7_1:66532450-66532469 | Msa1031800:intron | 30.0% |
| ! | AATGGAAGAAGGTGAATTTT+CGG | - | chr7_1:66532670-66532689 | Msa1031800:intron | 30.0% |
| GAAAAAGACTATGAAGAAGT+TGG | - | chr7_1:66532719-66532738 | Msa1031800:intron | 30.0% | |
| ! | CATTCTTAAAAATAGTGGAG+GGG | + | chr7_1:66532874-66532893 | None:intergenic | 30.0% |
| AAATGAAAATCACAAGGAGG+AGG | + | chr7_1:66529778-66529797 | None:intergenic | 35.0% | |
| TGCAAATGAAAATCACAAGG+AGG | + | chr7_1:66529781-66529800 | None:intergenic | 35.0% | |
| TGCTGCAAATGAAAATCACA+AGG | + | chr7_1:66529784-66529803 | None:intergenic | 35.0% | |
| AGTATTCATATTGGACAAGC+TGG | - | chr7_1:66529827-66529846 | Msa1031800:three_prime_UTR | 35.0% | |
| AAAACCCAGAAGGAACTATT+AGG | + | chr7_1:66530156-66530175 | None:intergenic | 35.0% | |
| CCAATTTGGCAATTCTCTAT+TGG | + | chr7_1:66530485-66530504 | None:intergenic | 35.0% | |
| CCAATAGAGAATTGCCAAAT+TGG | - | chr7_1:66530482-66530501 | Msa1031800:intron | 35.0% | |
| !!! | ATGCTGCTTTTCTTGATGTT+TGG | - | chr7_1:66530623-66530642 | Msa1031800:intron | 35.0% |
| AGGTTCCAGATCAACAAATA+AGG | + | chr7_1:66530872-66530891 | None:intergenic | 35.0% | |
| CTTACTTCATCGATAACAGT+AGG | + | chr7_1:66530892-66530911 | None:intergenic | 35.0% | |
| GTTATCGATGAAGTAAGAAC+TGG | - | chr7_1:66530895-66530914 | Msa1031800:CDS | 35.0% | |
| !!! | TTCACTTTTTAGCTTGACAG+TGG | - | chr7_1:66531043-66531062 | Msa1031800:CDS | 35.0% |
| CAGCACAGATACACAAATAA+TGG | + | chr7_1:66531069-66531088 | None:intergenic | 35.0% | |
| AAATTAGCAGACAATTGCAC+TGG | - | chr7_1:66531133-66531152 | Msa1031800:CDS | 35.0% | |
| !! | TTTGTTTTCAATGCTGTTGG+TGG | - | chr7_1:66531169-66531188 | Msa1031800:intron | 35.0% |
| ATTCTTAATACCTGAGGAGA+AGG | + | chr7_1:66531283-66531302 | None:intergenic | 35.0% | |
| GTCTTCATTCTTAATACCTG+AGG | + | chr7_1:66531289-66531308 | None:intergenic | 35.0% | |
| AGAAATCAAACGGTTCAAGT+TGG | + | chr7_1:66531772-66531791 | None:intergenic | 35.0% | |
| ATGAAATGGATACGAGGATA+TGG | + | chr7_1:66531879-66531898 | None:intergenic | 35.0% | |
| ! | CATAAGACGAAAGCATGAAA+TGG | + | chr7_1:66531893-66531912 | None:intergenic | 35.0% |
| ! | TTTTGAGCCATCAAGTATGA+TGG | - | chr7_1:66531980-66531999 | Msa1031800:CDS | 35.0% |
| ACAGCTGCATTTACATCTTT+AGG | + | chr7_1:66532071-66532090 | None:intergenic | 35.0% | |
| ACAGTTTGACTGAGTGATAT+TGG | - | chr7_1:66532436-66532455 | Msa1031800:intron | 35.0% | |
| TTGATCTCATGTATGCTAAG+AGG | - | chr7_1:66532618-66532637 | Msa1031800:intron | 35.0% | |
| TGATCTCATGTATGCTAAGA+GGG | - | chr7_1:66532619-66532638 | Msa1031800:intron | 35.0% | |
| GCATTTGTACATTGGTATGT+TGG | - | chr7_1:66532641-66532660 | Msa1031800:intron | 35.0% | |
| GATGATGAAGGAATGATGAT+AGG | + | chr7_1:66532793-66532812 | None:intergenic | 35.0% | |
| ! | TGCTAAGCTCTTCTATGTTT+TGG | - | chr7_1:66532905-66532924 | Msa1031800:CDS | 35.0% |
| !!! | TCTATGTTTTGGTGTAAACC+TGG | - | chr7_1:66532916-66532935 | Msa1031800:CDS | 35.0% |
| ! | AATTAGTTTCTCCAATTGCG+CGG | + | chr7_1:66532950-66532969 | None:intergenic | 35.0% |
| GAGAAACTAATTCCTTGAGT+CGG | - | chr7_1:66532958-66532977 | Msa1031800:CDS | 35.0% | |
| AGAAACTAATTCCTTGAGTC+GGG | - | chr7_1:66532959-66532978 | Msa1031800:CDS | 35.0% | |
| TTCAAGTGGGGAATTCATGT+TGG | - | chr7_1:66529852-66529871 | Msa1031800:three_prime_UTR | 40.0% | |
| TCAAGTGGGGAATTCATGTT+GGG | - | chr7_1:66529853-66529872 | Msa1031800:three_prime_UTR | 40.0% | |
| !! | GAGCTTTATTGTCTTGAGCA+TGG | - | chr7_1:66529875-66529894 | Msa1031800:three_prime_UTR | 40.0% |
| !! | CTGGGTCTTTTGAAAGCTTT+TGG | - | chr7_1:66530199-66530218 | Msa1031800:CDS | 40.0% |
| CCTTGAAGAATTGAATCCCT+TGG | + | chr7_1:66530422-66530441 | None:intergenic | 40.0% | |
| CCAAGGGATTCAATTCTTCA+AGG | - | chr7_1:66530419-66530438 | Msa1031800:intron | 40.0% | |
| AGGATACTGCTTGTAATGAG+TGG | - | chr7_1:66530439-66530458 | Msa1031800:intron | 40.0% | |
| AGATCAACAAATAAGGCCCT+TGG | + | chr7_1:66530865-66530884 | None:intergenic | 40.0% | |
| !! | AAGGGCCTTATTTGTTGATC+TGG | - | chr7_1:66530864-66530883 | Msa1031800:CDS | 40.0% |
| TGCCAGAAATTAGTTGCTCA+GGG | + | chr7_1:66530942-66530961 | None:intergenic | 40.0% | |
| TTGCCAGAAATTAGTTGCTC+AGG | + | chr7_1:66530943-66530962 | None:intergenic | 40.0% | |
| !! | TGAGCAACTAATTTCTGGCA+AGG | - | chr7_1:66530942-66530961 | Msa1031800:CDS | 40.0% |
| ATGCCGCTAATAATTTCGCA+AGG | - | chr7_1:66530968-66530987 | Msa1031800:CDS | 40.0% | |
| TGCCGCTAATAATTTCGCAA+GGG | - | chr7_1:66530969-66530988 | Msa1031800:CDS | 40.0% | |
| TCCCCTTGCGAAATTATTAG+CGG | + | chr7_1:66530974-66530993 | None:intergenic | 40.0% | |
| TGCATTAGAAATTGCCTCAC+CGG | + | chr7_1:66531004-66531023 | None:intergenic | 40.0% | |
| ! | CTAATTTTCTGATACGGTCG+AGG | + | chr7_1:66531120-66531139 | None:intergenic | 40.0% |
| !! | TGGTTTGGGATCGTTACTTT+TGG | - | chr7_1:66531204-66531223 | Msa1031800:intron | 40.0% |
| !!! | TGGGATCGTTACTTTTGGAA+AGG | - | chr7_1:66531209-66531228 | Msa1031800:intron | 40.0% |
| ! | GAAAGGTTGTCTGTCGATTA+TGG | - | chr7_1:66531226-66531245 | Msa1031800:intron | 40.0% |
| CTGTTCCACTCATTCACATA+TGG | - | chr7_1:66531430-66531449 | Msa1031800:intron | 40.0% | |
| TGTTGCCATATGTGAATGAG+TGG | + | chr7_1:66531438-66531457 | None:intergenic | 40.0% | |
| GTGGAAAGAACACTGTTGTA+AGG | + | chr7_1:66531648-66531667 | None:intergenic | 40.0% | |
| ! | CACTGATGTGGTTGTACTTT+TGG | - | chr7_1:66531686-66531705 | Msa1031800:intron | 40.0% |
| !! | CGGTTCAAGTTGGTATAAGT+TGG | + | chr7_1:66531762-66531781 | None:intergenic | 40.0% |
| TACTGAATTCCAGACTAACC+TGG | - | chr7_1:66531851-66531870 | Msa1031800:CDS | 40.0% | |
| ! | GAAAGCATGAAATGGATACG+AGG | + | chr7_1:66531885-66531904 | None:intergenic | 40.0% |
| CTTTGCAGAGGATATTACAG+GGG | + | chr7_1:66531916-66531935 | None:intergenic | 40.0% | |
| CCTTTGCAGAGGATATTACA+GGG | + | chr7_1:66531917-66531936 | None:intergenic | 40.0% | |
| AACTGATATCTGCTCATGGT+AGG | + | chr7_1:66531940-66531959 | None:intergenic | 40.0% | |
| CACTTAGCCATCATACTTGA+TGG | + | chr7_1:66531990-66532009 | None:intergenic | 40.0% | |
| !! | GAACAGTTCAGTTTGTTGAC+TGG | - | chr7_1:66532111-66532130 | Msa1031800:intron | 40.0% |
| !!! | ACTATTTTCAGGTGTCCAAC+TGG | - | chr7_1:66532461-66532480 | Msa1031800:intron | 40.0% |
| ATTCCACACTTGAAACCAGT+TGG | + | chr7_1:66532479-66532498 | None:intergenic | 40.0% | |
| ATCAATGCGAGAGAAAACCT+CGG | + | chr7_1:66532591-66532610 | None:intergenic | 40.0% | |
| !! | CTAAGAGGGCATTTGTACAT+TGG | - | chr7_1:66532633-66532652 | Msa1031800:intron | 40.0% |
| ! | GTACATTGGTATGTTGGTGA+AGG | - | chr7_1:66532647-66532666 | Msa1031800:intron | 40.0% |
| ! | TTGGTATGTTGGTGAAGGAA+TGG | - | chr7_1:66532652-66532671 | Msa1031800:intron | 40.0% |
| TATGAAGAAGTTGGAGCTGA+AGG | - | chr7_1:66532728-66532747 | Msa1031800:intron | 40.0% | |
| ATTACACAGCCAGATACAAC+AGG | + | chr7_1:66532843-66532862 | None:intergenic | 40.0% | |
| ACAAGGAGGAGGAAGTGAAA+AGG | + | chr7_1:66529767-66529786 | None:intergenic | 45.0% | |
| TGGACAAGCTGGAATTCAAG+TGG | - | chr7_1:66529838-66529857 | Msa1031800:three_prime_UTR | 45.0% | |
| GGACAAGCTGGAATTCAAGT+GGG | - | chr7_1:66529839-66529858 | Msa1031800:three_prime_UTR | 45.0% | |
| GACAAGCTGGAATTCAAGTG+GGG | - | chr7_1:66529840-66529859 | Msa1031800:three_prime_UTR | 45.0% | |
| GAGCATGGAATTCAACCTGA+TGG | - | chr7_1:66529890-66529909 | Msa1031800:three_prime_UTR | 45.0% | |
| !! | AACCTGATGGATTGATGCCT+AGG | - | chr7_1:66529903-66529922 | Msa1031800:three_prime_UTR | 45.0% |
| TACCTAGGCATCAATCCATC+AGG | + | chr7_1:66529908-66529927 | None:intergenic | 45.0% | |
| AACACCTTCTTCAGTGAGAC+TGG | - | chr7_1:66530823-66530842 | Msa1031800:CDS | 45.0% | |
| AGATCCAGTCTCACTGAAGA+AGG | + | chr7_1:66530830-66530849 | None:intergenic | 45.0% | |
| TTCTTCAGTGAGACTGGATC+TGG | - | chr7_1:66530829-66530848 | Msa1031800:CDS | 45.0% | |
| ATCTGGCAAGCATGTACCAA+GGG | - | chr7_1:66530846-66530865 | Msa1031800:CDS | 45.0% | |
| CACCCTGAGCAACTAATTTC+TGG | - | chr7_1:66530937-66530956 | Msa1031800:CDS | 45.0% | |
| GCCGCTAATAATTTCGCAAG+GGG | - | chr7_1:66530970-66530989 | Msa1031800:CDS | 45.0% | |
| TTGTGTATCTGTGCTGCAGT+TGG | - | chr7_1:66531073-66531092 | Msa1031800:CDS | 45.0% | |
| GACAATTGCACTGGATTGCA+AGG | - | chr7_1:66531142-66531161 | Msa1031800:CDS | 45.0% | |
| !! | GTTTTCAATGCTGTTGGTGG+AGG | - | chr7_1:66531172-66531191 | Msa1031800:intron | 45.0% |
| TACCATCTATCCTTCTCCTC+AGG | - | chr7_1:66531270-66531289 | Msa1031800:intron | 45.0% | |
| TACCTGAGGAGAAGGATAGA+TGG | + | chr7_1:66531275-66531294 | None:intergenic | 45.0% | |
| GTGCTCAAGAAGAGAATGAG+TGG | + | chr7_1:66531667-66531686 | None:intergenic | 45.0% | |
| TCTTCTTGAGCACACTGATG+TGG | - | chr7_1:66531674-66531693 | Msa1031800:CDS | 45.0% | |
| CTTCCTTGACAACTTCCTTG+AGG | - | chr7_1:66531802-66531821 | Msa1031800:CDS | 45.0% | |
| GAACCTCAAGGAAGTTGTCA+AGG | + | chr7_1:66531808-66531827 | None:intergenic | 45.0% | |
| ACAACTTCCTTGAGGTTCGA+CGG | - | chr7_1:66531810-66531829 | Msa1031800:CDS | 45.0% | |
| ! | GATATGGAACCAGGTTAGTC+TGG | + | chr7_1:66531863-66531882 | None:intergenic | 45.0% |
| CCCTGTAATATCCTCTGCAA+AGG | - | chr7_1:66531914-66531933 | Msa1031800:CDS | 45.0% | |
| GCCTTTGCAGAGGATATTAC+AGG | + | chr7_1:66531918-66531937 | None:intergenic | 45.0% | |
| CAGGAACTGATATCTGCTCA+TGG | + | chr7_1:66531944-66531963 | None:intergenic | 45.0% | |
| !! | AAAACTGCGTTGGTGATCTC+AGG | + | chr7_1:66531963-66531982 | None:intergenic | 45.0% |
| TGATGGCTCAAAAACTGCGT+TGG | + | chr7_1:66531973-66531992 | None:intergenic | 45.0% | |
| GCTAAGTGTGATCCTAGACA+CGG | - | chr7_1:66532002-66532021 | Msa1031800:intron | 45.0% | |
| ! | TCCTAGACACGGAAAGTACA+TGG | - | chr7_1:66532013-66532032 | Msa1031800:intron | 45.0% |
| ! | TGTCCAACTGGTTTCAAGTG+TGG | - | chr7_1:66532473-66532492 | Msa1031800:intron | 45.0% |
| ! | GTTGGTGAAGGAATGGAAGA+AGG | - | chr7_1:66532659-66532678 | Msa1031800:intron | 45.0% |
| ! | AAGGTGAATTTTCGGAAGCC+AGG | - | chr7_1:66532678-66532697 | Msa1031800:intron | 45.0% |
| ! | AGGTGAATTTTCGGAAGCCA+GGG | - | chr7_1:66532679-66532698 | Msa1031800:intron | 45.0% |
| ! | ACAGGAGGTGATGATGATGA+AGG | + | chr7_1:66532805-66532824 | None:intergenic | 45.0% |
| ACACAATACTACCCGACTCA+AGG | + | chr7_1:66532973-66532992 | None:intergenic | 45.0% | |
| CATTGCAGTGATACCTCACC+TGG | - | chr7_1:66530781-66530800 | Msa1031800:CDS | 50.0% | |
| GATCTGGCAAGCATGTACCA+AGG | - | chr7_1:66530845-66530864 | Msa1031800:CDS | 50.0% | |
| ! | AATGCTGTTGGTGGAGGTAC+TGG | - | chr7_1:66531178-66531197 | Msa1031800:intron | 50.0% |
| !! | TGGAGGTACTGGTTCTGGTT+TGG | - | chr7_1:66531189-66531208 | Msa1031800:intron | 50.0% |
| !! | GGAGGTACTGGTTCTGGTTT+GGG | - | chr7_1:66531190-66531209 | Msa1031800:intron | 50.0% |
| GGATACGAGGATATGGAACC+AGG | + | chr7_1:66531872-66531891 | None:intergenic | 50.0% | |
| GCCATGTACTTTCCGTGTCT+AGG | + | chr7_1:66532017-66532036 | None:intergenic | 50.0% | |
| CAACATCTCCGCGATACATG+AGG | + | chr7_1:66532046-66532065 | None:intergenic | 50.0% | |
| TTCGCTTTGCGCTCATCACA+CGG | + | chr7_1:66532390-66532409 | None:intergenic | 50.0% | |
| ! | CAACAACACAGCTGTTTCCG+AGG | - | chr7_1:66532571-66532590 | Msa1031800:intron | 50.0% |
| ! | TGAATTTTCGGAAGCCAGGG+AGG | - | chr7_1:66532682-66532701 | Msa1031800:intron | 50.0% |
| CAGAGCAGAACAAAGACAGG+AGG | + | chr7_1:66532820-66532839 | None:intergenic | 50.0% | |
| AGGCAGAGCAGAACAAAGAC+AGG | + | chr7_1:66532823-66532842 | None:intergenic | 50.0% | |
| TCTGCTCTGCCTGTTGTATC+TGG | - | chr7_1:66532831-66532850 | Msa1031800:intron | 50.0% | |
| AATTGCGCGGAGAAGATACC+AGG | + | chr7_1:66532937-66532956 | None:intergenic | 50.0% | |
| TGGTATCTTCTCCGCGCAAT+TGG | - | chr7_1:66532936-66532955 | Msa1031800:CDS | 50.0% | |
| !! | AAAGCATCGTGTGCTACGCC+AGG | + | chr7_1:66530802-66530821 | None:intergenic | 55.0% |
| TTCGCAAGGGGACACTACAC+CGG | - | chr7_1:66530982-66531001 | Msa1031800:CDS | 55.0% | |
| !! | GTTGGTGGAGGTACTGGTTC+TGG | - | chr7_1:66531184-66531203 | Msa1031800:intron | 55.0% |
| GATTGCACCGTCGAACCTCA+AGG | + | chr7_1:66531820-66531839 | None:intergenic | 55.0% | |
| GTTCGACGGTGCAATCAACG+TGG | - | chr7_1:66531824-66531843 | Msa1031800:CDS | 55.0% | |
| CTCATGGTAGGCCTTTGCAG+AGG | + | chr7_1:66531928-66531947 | None:intergenic | 55.0% | |
| GCATGCTGCCTCATGTATCG+CGG | - | chr7_1:66532035-66532054 | Msa1031800:intron | 55.0% | |
| CAACTACCAGCCTCCAACAG+TGG | - | chr7_1:66532499-66532518 | Msa1031800:intron | 55.0% | |
| AAGAGCAGCAAGATCCTCCC+TGG | + | chr7_1:66532699-66532718 | None:intergenic | 55.0% | |
| GTTGGAGCTGAAGGTGAAGC+TGG | - | chr7_1:66532737-66532756 | Msa1031800:intron | 55.0% | |
| ATCGTGTGCTACGCCAGGTG+AGG | + | chr7_1:66530797-66530816 | None:intergenic | 60.0% | |
| AAGGGGACACTACACCGGTG+AGG | - | chr7_1:66530987-66531006 | Msa1031800:CDS | 60.0% | |
| CTGGTACCACTGTTGGAGGC+TGG | + | chr7_1:66532508-66532527 | None:intergenic | 60.0% | |
| CAGCCTCCAACAGTGGTACC+AGG | - | chr7_1:66532506-66532525 | Msa1031800:intron | 60.0% | |
| CCTCCTGGTACCACTGTTGG+AGG | + | chr7_1:66532512-66532531 | None:intergenic | 60.0% | |
| CCTCCAACAGTGGTACCAGG+AGG | - | chr7_1:66532509-66532528 | Msa1031800:intron | 60.0% | |
| TCGCCTCCTGGTACCACTGT+TGG | + | chr7_1:66532515-66532534 | None:intergenic | 60.0% | |
| ACCAGGAGGCGATCTTGCGA+AGG | - | chr7_1:66532523-66532542 | Msa1031800:intron | 60.0% | |
| ACCTTCGCAAGATCGCCTCC+TGG | + | chr7_1:66532527-66532546 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 66529739 | 66533057 | 66529739 | ID=Msa1031800;Name=Msa1031800 |
| chr7_1 | mRNA | 66529739 | 66533057 | 66529739 | ID=Msa1031800-mRNA-1;Parent=Msa1031800;Name=Msa1031800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=73|1|1|1|1|1|5|270|450 |
| chr7_1 | exon | 66529739 | 66530324 | 66529739 | ID=Msa1031800-mRNA-1:exon:15030;Parent=Msa1031800-mRNA-1 |
| chr7_1 | exon | 66530664 | 66531172 | 66530664 | ID=Msa1031800-mRNA-1:exon:15029;Parent=Msa1031800-mRNA-1 |
| chr7_1 | exon | 66531505 | 66531704 | 66531505 | ID=Msa1031800-mRNA-1:exon:15028;Parent=Msa1031800-mRNA-1 |
| chr7_1 | exon | 66531793 | 66532007 | 66531793 | ID=Msa1031800-mRNA-1:exon:15027;Parent=Msa1031800-mRNA-1 |
| chr7_1 | exon | 66532872 | 66533057 | 66532872 | ID=Msa1031800-mRNA-1:exon:15026;Parent=Msa1031800-mRNA-1 |
| chr7_1 | five_prime_UTR | 66532985 | 66533057 | 66532985 | ID=Msa1031800-mRNA-1:five_prime_utr;Parent=Msa1031800-mRNA-1 |
| chr7_1 | CDS | 66532872 | 66532984 | 66532872 | ID=Msa1031800-mRNA-1:cds;Parent=Msa1031800-mRNA-1 |
| chr7_1 | CDS | 66531793 | 66532007 | 66531793 | ID=Msa1031800-mRNA-1:cds;Parent=Msa1031800-mRNA-1 |
| chr7_1 | CDS | 66531505 | 66531704 | 66531505 | ID=Msa1031800-mRNA-1:cds;Parent=Msa1031800-mRNA-1 |
| chr7_1 | CDS | 66530664 | 66531172 | 66530664 | ID=Msa1031800-mRNA-1:cds;Parent=Msa1031800-mRNA-1 |
| chr7_1 | CDS | 66530009 | 66530324 | 66530009 | ID=Msa1031800-mRNA-1:cds;Parent=Msa1031800-mRNA-1 |
| chr7_1 | three_prime_UTR | 66529739 | 66530008 | 66529739 | ID=Msa1031800-mRNA-1:three_prime_utr;Parent=Msa1031800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
