AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1033800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033800 MtrunA17_Chr7g0256741 95.312 320 15 0 1 320 1 320 0.0 647
Msa1033800 MtrunA17_Chr4g0004071 39.623 318 186 5 1 316 1 314 7.99e-82 250
Msa1033800 MtrunA17_Chr4g0004061 38.245 319 190 6 1 316 1 315 7.36e-81 248
Msa1033800 MtrunA17_Chr1g0148781 31.707 328 208 10 1 316 1 324 6.85e-52 174
Msa1033800 MtrunA17_Chr4g0009541 30.945 307 199 8 10 305 7 311 2.21e-47 162
Msa1033800 MtrunA17_Chr4g0009561 30.599 317 205 10 10 316 7 318 3.32e-46 159
Msa1033800 MtrunA17_Chr3g0138351 28.704 324 216 9 1 316 1 317 4.05e-46 158
Msa1033800 MtrunA17_Chr8g0375701 32.168 286 177 7 8 286 53 328 1.43e-28 113
Msa1033800 MtrunA17_Chr8g0348951 26.667 300 194 9 10 297 10 295 3.34e-28 111
Msa1033800 MtrunA17_Chr7g0247741 27.757 263 182 6 41 297 35 295 3.63e-27 108
Msa1033800 MtrunA17_Chr7g0239101 30.159 315 185 14 6 304 51 346 7.46e-27 108
Msa1033800 MtrunA17_Chr2g0314401 31.496 254 165 6 39 286 77 327 3.60e-26 106
Msa1033800 MtrunA17_Chr6g0455481 30.556 288 181 9 7 286 39 315 3.28e-25 103
Msa1033800 MtrunA17_Chr2g0314391 33.103 290 168 11 10 286 70 346 1.73e-24 102
Msa1033800 MtrunA17_Chr7g0220011 30.363 303 178 12 10 298 39 322 1.57e-23 99.0
Msa1033800 MtrunA17_Chr1g0162361 25.902 305 198 7 10 298 27 319 1.60e-23 99.0
Msa1033800 MtrunA17_Chr7g0239111 30.671 313 186 15 6 304 51 346 1.65e-23 99.4
Msa1033800 MtrunA17_Chr2g0314381 28.333 300 199 10 10 301 77 368 4.14e-23 98.6
Msa1033800 MtrunA17_Chr1g0204181 27.609 297 200 9 28 313 76 368 6.17e-23 97.8
Msa1033800 MtrunA17_Chr2g0296371 27.393 303 206 10 10 304 50 346 3.48e-22 95.5
Msa1033800 MtrunA17_Chr5g0423201 27.076 277 183 7 39 304 71 339 3.54e-22 95.5
Msa1033800 MtrunA17_Chr5g0421041 27.575 301 203 8 10 304 45 336 1.41e-21 93.6
Msa1033800 MtrunA17_Chr5g0407781 24.062 320 197 8 6 307 1 292 2.03e-21 92.4
Msa1033800 MtrunA17_Chr5g0423191 28.571 308 195 11 8 304 45 338 2.10e-21 93.2
Msa1033800 MtrunA17_Chr5g0421011 27.885 312 188 13 10 304 47 338 4.14e-21 92.4
Msa1033800 MtrunA17_Chr8g0351101 27.305 282 192 7 29 300 72 350 4.22e-21 92.8
Msa1033800 MtrunA17_Chr8g0370711 26.774 310 195 11 10 302 52 346 5.09e-21 92.0
Msa1033800 MtrunA17_Chr4g0064781 28.369 282 183 9 34 303 67 341 1.42e-20 90.9
Msa1033800 MtrunA17_Chr1g0184121 31.053 190 119 5 117 300 143 326 1.48e-20 90.9
Msa1033800 MtrunA17_Chr3g0113641 28.882 322 190 13 10 315 50 348 1.58e-20 90.9
Msa1033800 MtrunA17_Chr5g0420941 28.475 295 155 13 39 304 69 336 2.41e-20 90.1
Msa1033800 MtrunA17_Chr1g0162321 29.787 188 124 4 118 302 194 376 2.82e-20 90.5
Msa1033800 MtrunA17_Chr3g0145171 27.331 311 192 12 10 302 52 346 3.27e-20 89.7
Msa1033800 MtrunA17_Chr1g0148771 25.681 257 176 5 10 263 63 307 3.87e-20 89.7
Msa1033800 MtrunA17_Chr3g0130391 26.282 312 193 12 11 300 67 363 4.11e-20 90.1
Msa1033800 MtrunA17_Chr4g0006371 27.393 303 195 11 10 296 62 355 5.31e-20 89.4
Msa1033800 MtrunA17_Chr5g0420981 28.947 266 168 7 10 266 53 306 6.05e-20 89.4
Msa1033800 MtrunA17_Chr2g0332191 25.342 292 196 9 5 286 47 326 7.18e-20 89.0
Msa1033800 MtrunA17_Chr8g0375681 29.197 274 159 11 27 286 6 258 7.64e-20 87.8
Msa1033800 MtrunA17_Chr7g0239121 27.244 312 199 13 6 304 47 343 1.13e-19 88.6
Msa1033800 MtrunA17_Chr4g0045411 25.597 293 204 7 6 285 26 317 1.24e-19 88.2
Msa1033800 MtrunA17_Chr5g0412671 24.837 306 200 10 10 300 38 328 1.42e-19 88.2
Msa1033800 MtrunA17_Chr1g0184111 30.319 188 125 5 117 301 143 327 1.49e-19 87.8
Msa1033800 MtrunA17_Chr5g0423251 27.097 310 195 11 1 296 38 330 1.78e-19 87.8
Msa1033800 MtrunA17_Chr8g0375671 29.730 296 174 9 10 287 52 331 1.88e-19 87.8
Msa1033800 MtrunA17_Chr1g0162351 28.191 188 127 4 118 302 194 376 3.61e-19 87.4
Msa1033800 MtrunA17_Chr6g0474391 27.152 302 205 10 10 300 64 361 4.02e-19 87.0
Msa1033800 MtrunA17_Chr8g0370721 27.010 311 193 11 10 302 52 346 5.94e-19 86.3
Msa1033800 MtrunA17_Chr5g0421091 26.936 297 168 12 34 304 64 337 7.72e-19 85.9
Msa1033800 MtrunA17_Chr7g0250511 26.073 303 204 10 5 298 44 335 7.80e-19 85.9
Msa1033800 MtrunA17_Chr5g0407731 24.919 309 186 8 6 296 29 309 7.82e-19 85.9
Msa1033800 MtrunA17_Chr1g0184161 26.689 296 192 9 10 294 38 319 7.95e-19 85.9
Msa1033800 MtrunA17_Chr8g0384461 25.152 330 208 14 10 317 47 359 9.11e-19 85.9
Msa1033800 MtrunA17_Chr3g0087031 28.155 309 200 13 3 301 53 349 1.12e-18 85.5
Msa1033800 MtrunA17_Chr7g0239821 25.097 259 180 8 54 304 103 355 1.25e-18 85.5
Msa1033800 MtrunA17_Chr7g0220001 29.278 263 166 9 8 263 39 288 1.39e-18 85.1
Msa1033800 MtrunA17_Chr7g0242551 26.101 318 205 12 10 315 54 353 1.81e-18 85.1
Msa1033800 MtrunA17_Chr5g0420721 31.492 181 95 6 148 304 65 240 2.38e-18 83.2
Msa1033800 MtrunA17_Chr8g0365241 28.179 291 180 10 10 286 57 332 2.54e-18 84.7
Msa1033800 MtrunA17_Chr5g0423221 27.698 278 173 12 40 301 96 361 2.95e-18 84.7
Msa1033800 MtrunA17_Chr3g0125421 26.974 304 199 12 11 299 37 332 4.83e-18 84.0
Msa1033800 MtrunA17_Chr1g0184151 29.189 185 115 6 117 294 144 319 4.91e-18 83.6
Msa1033800 MtrunA17_Chr5g0420901 26.625 323 178 15 10 304 46 337 9.12e-18 82.8
Msa1033800 MtrunA17_Chr3g0125201 24.684 316 207 7 10 309 3 303 9.91e-18 82.4
Msa1033800 MtrunA17_Chr5g0412681 25.000 304 180 10 5 286 28 305 1.37e-17 82.4
Msa1033800 MtrunA17_Chr5g0423211 27.211 294 160 12 39 303 71 339 1.43e-17 82.4
Msa1033800 MtrunA17_Chr8g0375601 27.682 289 186 9 10 286 48 325 2.01e-17 82.0
Msa1033800 MtrunA17_Chr5g0412651 25.559 313 189 12 10 300 38 328 2.47e-17 81.6
Msa1033800 MtrunA17_Chr5g0421101 27.303 304 200 10 10 304 47 338 3.02e-17 81.3
Msa1033800 MtrunA17_Chr7g0239071 27.915 283 180 11 31 304 24 291 3.18e-17 80.9
Msa1033800 MtrunA17_Chr3g0128001 26.562 256 178 3 10 263 38 285 3.26e-17 81.3
Msa1033800 MtrunA17_Chr8g0375571 24.675 308 206 9 1 293 36 332 4.78e-17 80.9
Msa1033800 MtrunA17_Chr4g0045441 26.738 187 129 4 119 302 150 331 4.86e-17 80.9
Msa1033800 MtrunA17_Chr5g0398291 26.384 307 206 10 10 302 47 347 6.17e-17 80.5
Msa1033800 MtrunA17_Chr4g0045431 28.488 172 119 3 119 287 150 320 6.41e-17 80.5
Msa1033800 MtrunA17_Chr7g0225881 27.483 302 190 14 2 288 58 345 6.54e-17 80.5
Msa1033800 MtrunA17_Chr5g0420881 35.772 123 75 3 184 304 14 134 7.17e-17 76.6
Msa1033800 MtrunA17_Chr8g0345831 24.595 309 215 8 5 305 37 335 7.41e-17 80.1
Msa1033800 MtrunA17_Chr5g0424201 27.019 322 186 17 2 297 33 331 7.53e-17 80.1
Msa1033800 MtrunA17_Chr4g0053251 26.071 280 172 10 10 263 8 278 7.78e-17 79.7
Msa1033800 MtrunA17_Chr4g0045471 28.324 173 119 4 119 287 150 321 7.90e-17 80.1
Msa1033800 MtrunA17_Chr1g0191201 25.902 305 201 10 11 299 54 349 1.06e-16 80.1
Msa1033800 MtrunA17_Chr7g0232161 30.800 250 147 13 10 248 60 294 1.10e-16 79.3
Msa1033800 MtrunA17_Chr7g0265221 26.032 315 203 9 9 305 69 371 1.69e-16 79.3
Msa1033800 MtrunA17_Chr4g0068891 26.752 314 189 12 1 294 9 301 1.75e-16 79.0
Msa1033800 MtrunA17_Chr3g0102041 27.243 301 189 11 7 289 36 324 3.13e-16 78.6
Msa1033800 MtrunA17_Chr5g0420951 25.685 292 202 8 1 285 44 327 3.74e-16 78.2
Msa1033800 MtrunA17_Chr8g0336751 25.763 295 206 9 9 297 93 380 3.75e-16 78.6
Msa1033800 MtrunA17_Chr5g0437181 28.875 329 192 16 4 315 44 347 4.62e-16 78.2
Msa1033800 MtrunA17_Chr4g0050031 26.115 314 204 12 4 303 56 355 4.83e-16 78.2
Msa1033800 MtrunA17_Chr5g0394071 29.496 139 94 4 126 263 2 137 7.41e-16 74.7
Msa1033800 MtrunA17_Chr8g0336761 26.421 299 189 12 6 288 56 339 7.58e-16 77.4
Msa1033800 MtrunA17_Chr1g0162191 29.167 288 182 11 10 286 47 323 9.87e-16 77.0
Msa1033800 MtrunA17_Chr8g0336781 24.606 317 208 12 3 303 88 389 1.20e-15 77.0
Msa1033800 MtrunA17_Chr4g0066121 25.914 301 185 12 8 288 58 340 1.43e-15 76.6
Msa1033800 MtrunA17_Chr3g0093761 25.902 305 196 11 8 300 54 340 2.62e-15 75.9
Msa1033800 MtrunA17_Chr2g0311761 26.230 305 188 12 3 288 61 347 3.98e-15 75.5
Msa1033800 MtrunA17_Chr2g0293931 29.651 172 108 6 128 287 9 179 4.24e-15 73.2
Msa1033800 MtrunA17_Chr3g0093751 26.403 303 198 9 8 300 54 341 7.89e-15 74.3
Msa1033800 MtrunA17_Chr1g0184101 28.796 191 117 7 117 300 144 322 8.01e-15 74.3
Msa1033800 MtrunA17_Chr2g0313111 27.119 295 181 10 1 280 19 294 1.12e-14 73.6
Msa1033800 MtrunA17_Chr4g0037611 29.921 127 86 3 138 263 3 127 1.87e-14 70.9
Msa1033800 MtrunA17_Chr8g0389941 24.490 343 210 14 1 313 23 346 2.52e-14 72.8
Msa1033800 MtrunA17_Chr8g0384481 23.179 302 218 9 10 302 59 355 3.44e-14 72.8
Msa1033800 MtrunA17_Chr3g0093741 25.329 304 200 10 8 300 54 341 3.51e-14 72.4
Msa1033800 MtrunA17_Chr7g0233661 33.333 105 67 3 159 263 10 111 5.66e-14 68.6
Msa1033800 MtrunA17_Chr3g0109041 25.503 298 193 10 7 286 39 325 6.39e-14 71.6
Msa1033800 MtrunA17_Chr7g0239091 32.540 126 81 3 181 304 318 441 1.45e-13 71.2
Msa1033800 MtrunA17_Chr2g0311861 25.545 321 197 14 3 313 57 345 1.62e-13 70.5
Msa1033800 MtrunA17_Chr5g0424211 25.083 303 187 12 2 282 31 315 1.72e-13 70.1
Msa1033800 MtrunA17_Chr2g0285931 31.148 122 79 3 166 283 184 304 2.19e-13 70.1
Msa1033800 MtrunA17_Chr4g0045451 24.756 307 208 10 10 298 26 327 2.48e-13 70.1
Msa1033800 MtrunA17_Chr2g0314371 27.434 226 131 9 39 236 78 298 3.97e-13 69.3
Msa1033800 MtrunA17_Chr8g0358941 38.710 93 53 2 184 273 203 294 4.08e-13 69.3
Msa1033800 MtrunA17_Chr3g0114861 25.547 274 179 10 40 297 62 326 4.83e-13 68.9
Msa1033800 MtrunA17_Chr6g0472861 25.676 296 199 11 2 286 61 346 7.92e-13 68.6
Msa1033800 MtrunA17_Chr3g0126761 36.290 124 73 5 184 305 104 223 7.94e-13 67.0
Msa1033800 MtrunA17_Chr1g0194321 33.962 106 67 2 184 287 203 307 8.21e-13 68.2
Msa1033800 MtrunA17_Chr1g0179801 23.934 305 184 11 10 288 66 348 8.75e-13 68.6
Msa1033800 MtrunA17_Chr1g0167961 25.325 308 178 12 7 288 66 347 1.11e-12 68.2
Msa1033800 MtrunA17_Chr3g0126741 25.786 318 204 14 3 305 52 352 1.36e-12 67.8
Msa1033800 MtrunA17_Chr3g0121141 23.547 327 211 14 11 320 5 309 3.20e-12 66.2
Msa1033800 MtrunA17_Chr2g0289341 22.727 308 221 8 11 312 5 301 3.58e-12 66.2
Msa1033800 MtrunA17_Chr3g0092531 24.046 262 186 6 6 263 2 254 8.09e-12 65.1
Msa1033800 MtrunA17_Chr2g0319491 34.737 95 60 2 169 263 187 279 1.15e-11 64.7
Msa1033800 MtrunA17_Chr2g0311631 28.669 293 168 15 10 280 55 328 1.16e-11 65.1
Msa1033800 MtrunA17_Chr4g0052251 31.132 106 69 2 184 286 202 306 1.95e-11 63.9
Msa1033800 MtrunA17_Chr1g0184241 25.532 188 134 5 119 303 172 356 5.95e-11 62.8
Msa1033800 MtrunA17_Chr5g0439011 31.973 147 89 4 185 323 174 317 7.36e-11 62.4
Msa1033800 MtrunA17_Chr5g0407591 37.209 86 51 2 214 296 5 90 9.19e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033800 AT1G52800.1 43.218 317 176 4 1 316 1 314 6.28e-93 279
Msa1033800 AT1G52820.1 41.875 320 179 5 1 316 1 317 1.57e-86 263
Msa1033800 AT1G52790.1 38.339 313 188 5 6 316 1 310 2.96e-80 246
Msa1033800 AT1G80320.1 37.658 316 186 6 8 316 7 318 4.01e-77 239
Msa1033800 AT4G03070.1 39.375 320 178 7 5 315 9 321 4.38e-72 226
Msa1033800 AT1G52820.2 39.916 238 139 3 1 236 1 236 7.57e-60 192
Msa1033800 AT1G15540.1 35.714 322 195 8 2 316 3 319 4.79e-59 192
Msa1033800 AT1G15540.4 35.714 322 195 8 2 316 3 319 4.79e-59 192
Msa1033800 AT1G15540.3 35.714 322 195 8 2 316 10 326 4.84e-59 192
Msa1033800 AT1G15540.2 35.714 322 195 8 2 316 6 322 6.12e-59 192
Msa1033800 AT1G52810.1 33.648 318 170 8 5 316 7 289 2.36e-52 174
Msa1033800 AT1G28030.1 32.317 328 204 10 1 316 1 322 1.78e-49 168
Msa1033800 AT4G03050.2 37.853 177 104 3 1 177 1 171 2.97e-31 121
Msa1033800 AT4G03050.2 40.000 140 79 4 181 317 271 408 5.25e-28 112
Msa1033800 AT4G03050.1 37.853 177 104 3 1 177 1 171 2.97e-31 121
Msa1033800 AT4G03050.1 40.000 140 79 4 181 317 271 408 5.25e-28 112
Msa1033800 AT3G21420.1 29.373 303 201 10 10 304 55 352 2.39e-24 102
Msa1033800 AT1G17020.1 28.621 290 183 9 10 286 53 331 2.60e-24 101
Msa1033800 AT1G78550.1 28.707 317 193 13 1 300 44 344 7.36e-24 100
Msa1033800 AT4G21690.1 26.263 297 193 7 4 286 41 325 2.29e-23 99.0
Msa1033800 AT5G51810.1 26.733 303 200 9 10 300 63 355 2.88e-23 99.4
Msa1033800 AT5G07200.1 26.797 306 204 11 10 300 58 358 8.04e-23 97.8
Msa1033800 AT1G80330.1 27.675 271 168 9 4 261 43 298 1.42e-22 97.1
Msa1033800 AT4G25300.1 30.403 273 151 12 10 263 52 304 2.68e-22 96.3
Msa1033800 AT4G25310.1 34.513 226 121 11 52 263 89 301 5.48e-22 95.1
Msa1033800 AT1G17010.1 28.105 306 193 12 10 301 54 346 6.76e-22 95.1
Msa1033800 AT4G23340.1 26.384 307 189 11 10 299 10 296 1.82e-21 93.6
Msa1033800 AT4G25420.1 24.845 322 225 9 10 320 61 376 4.79e-21 92.8
Msa1033800 AT1G78550.2 30.337 267 156 12 51 300 13 266 2.04e-20 89.7
Msa1033800 AT2G38240.1 28.041 296 194 10 10 295 48 334 2.96e-20 90.5
Msa1033800 AT5G07480.1 25.857 321 205 10 4 305 38 344 5.18e-20 89.7
Msa1033800 AT3G19010.1 25.424 295 196 9 10 286 28 316 2.15e-19 87.8
Msa1033800 AT3G19010.4 25.424 295 196 9 10 286 28 316 2.15e-19 87.8
Msa1033800 AT1G30040.1 28.070 285 168 8 7 273 28 293 2.62e-19 87.4
Msa1033800 AT5G05600.1 27.796 313 210 10 10 313 62 367 4.03e-19 87.4
Msa1033800 AT1G14130.1 25.260 289 187 6 9 287 8 277 4.40e-19 86.7
Msa1033800 AT2G36690.2 32.990 194 117 8 118 306 167 352 1.49e-18 85.9
Msa1033800 AT2G36690.1 32.990 194 117 8 118 306 167 352 1.49e-18 85.9
Msa1033800 AT1G15550.1 26.871 294 191 9 10 292 57 337 1.56e-18 85.5
Msa1033800 AT1G14120.2 24.497 298 190 6 6 290 4 279 2.67e-18 84.3
Msa1033800 AT1G14120.1 24.497 298 190 6 6 290 4 279 2.67e-18 84.3
Msa1033800 AT1G14120.3 24.497 298 190 6 6 290 4 279 2.67e-18 84.3
Msa1033800 AT1G44090.1 33.333 177 108 4 125 299 191 359 4.25e-18 84.7
Msa1033800 AT3G50210.4 26.978 278 178 8 10 263 8 284 4.73e-18 84.0
Msa1033800 AT3G50210.1 26.978 278 178 8 10 263 8 284 4.73e-18 84.0
Msa1033800 AT3G50210.3 26.978 278 178 8 10 263 8 284 4.73e-18 84.0
Msa1033800 AT4G23340.2 31.481 162 100 5 140 299 26 178 7.99e-18 80.9
Msa1033800 AT5G24530.1 24.917 301 211 6 6 300 32 323 4.75e-17 81.3
Msa1033800 AT4G22880.1 26.384 307 206 11 10 302 47 347 1.00e-16 80.5
Msa1033800 AT4G22880.2 26.384 307 206 11 10 302 47 347 1.00e-16 80.5
Msa1033800 AT4G22880.3 26.384 307 206 11 10 302 47 347 1.00e-16 80.5
Msa1033800 AT4G25300.2 36.957 138 78 4 166 301 120 250 1.02e-16 79.0
Msa1033800 AT2G34555.1 28.090 267 165 9 9 264 26 276 2.87e-16 79.0
Msa1033800 AT1G78440.1 25.899 278 177 9 9 272 17 279 4.53e-16 78.2
Msa1033800 AT3G49620.1 23.906 297 203 8 9 284 33 327 7.96e-16 77.8
Msa1033800 AT5G59530.1 26.552 290 194 9 10 288 58 339 1.14e-15 77.4
Msa1033800 AT5G07480.2 28.934 197 129 6 117 305 42 235 1.15e-15 75.9
Msa1033800 AT5G20400.1 25.879 313 203 10 10 307 45 343 2.84e-15 75.9
Msa1033800 AT4G25310.2 31.250 224 103 11 52 263 89 273 3.68e-15 75.5
Msa1033800 AT3G19010.3 24.746 295 168 12 10 286 28 286 3.88e-15 75.5
Msa1033800 AT3G49630.1 25.753 299 191 11 9 282 8 300 4.05e-15 75.5
Msa1033800 AT3G11180.1 27.465 284 189 9 40 313 120 396 4.49e-15 75.9
Msa1033800 AT5G20550.1 26.246 301 201 10 10 298 45 336 4.55e-15 75.5
Msa1033800 AT5G54000.2 26.950 282 179 10 34 296 68 341 5.50e-15 75.1
Msa1033800 AT3G11180.2 28.137 263 175 8 40 292 120 378 6.73e-15 75.5
Msa1033800 AT5G54000.1 28.302 265 163 10 51 296 5 261 7.33e-15 73.9
Msa1033800 AT5G08640.2 24.590 305 196 9 10 297 43 330 8.59e-15 74.3
Msa1033800 AT5G08640.1 24.590 305 196 9 10 297 43 330 8.59e-15 74.3
Msa1033800 AT3G13610.1 26.861 309 185 16 8 298 60 345 1.03e-14 74.3
Msa1033800 AT5G51810.2 25.417 240 160 7 10 239 63 293 1.46e-14 73.6
Msa1033800 AT3G49630.3 25.940 266 176 8 34 282 35 296 1.66e-14 73.6
Msa1033800 AT5G59540.1 25.163 306 216 8 3 300 53 353 2.41e-14 73.6
Msa1033800 AT1G02400.1 26.603 312 195 13 2 294 13 309 3.10e-14 72.8
Msa1033800 AT3G55970.1 25.418 299 207 8 10 298 52 344 1.38e-13 71.2
Msa1033800 AT5G63590.1 24.658 292 192 10 10 287 14 291 1.72e-13 70.5
Msa1033800 AT3G50210.2 29.139 151 102 2 118 263 52 202 2.04e-13 69.3
Msa1033800 AT1G06640.1 25.641 312 201 13 8 303 62 358 2.81e-13 70.1
Msa1033800 AT5G63600.2 24.407 295 198 9 10 295 33 311 2.83e-13 70.1
Msa1033800 AT1G06650.2 24.516 310 207 12 8 303 62 358 3.11e-13 70.1
Msa1033800 AT1G49390.1 24.074 324 206 13 3 302 33 340 3.12e-13 70.1
Msa1033800 AT1G80340.1 25.253 297 196 10 8 292 48 330 5.86e-13 69.3
Msa1033800 AT4G16330.2 25.556 270 183 6 10 272 67 325 8.59e-13 68.9
Msa1033800 AT3G12900.1 32.812 128 80 4 174 298 216 340 9.55e-13 68.6
Msa1033800 AT1G77330.1 33.600 125 79 3 185 306 176 299 9.89e-13 68.2
Msa1033800 AT3G61400.1 29.545 176 102 6 127 288 179 346 1.10e-12 68.6
Msa1033800 AT1G49390.2 25.641 273 166 12 51 302 5 261 1.18e-12 67.4
Msa1033800 AT1G60980.1 26.374 182 126 4 121 300 179 354 1.42e-12 68.2
Msa1033800 AT4G16330.1 27.742 155 110 2 118 272 67 219 2.16e-12 66.6
Msa1033800 AT4G10500.1 25.484 310 209 9 4 303 38 335 2.24e-12 67.4
Msa1033800 AT5G63600.1 24.150 294 199 8 10 295 33 310 2.44e-12 67.0
Msa1033800 AT1G55290.1 25.879 313 196 16 4 300 56 348 2.53e-12 67.4
Msa1033800 AT4G21200.1 36.709 79 48 2 185 263 211 287 2.74e-12 67.0
Msa1033800 AT1G50960.1 22.266 256 190 7 10 263 40 288 3.00e-12 67.0
Msa1033800 AT5G63595.1 25.670 261 159 10 7 262 22 252 4.06e-12 66.2
Msa1033800 AT2G30840.1 23.490 298 202 10 5 288 52 337 5.31e-12 66.2
Msa1033800 AT3G19000.1 27.174 184 126 4 118 298 151 329 7.49e-12 65.9
Msa1033800 AT4G10490.1 24.204 314 200 10 4 300 36 328 7.55e-12 65.9
Msa1033800 AT3G60290.1 26.702 191 135 4 117 305 158 345 1.50e-11 65.1
Msa1033800 AT3G49630.2 26.627 169 117 4 118 282 62 227 1.64e-11 63.9
Msa1033800 AT4G25420.2 23.305 236 168 6 10 236 61 292 4.31e-11 63.2
Msa1033800 AT2G25450.1 24.915 293 196 9 9 288 54 335 5.18e-11 63.5

Find 62 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTACCAGGTTTCATGTTT+TGG 0.196129 7_1:+69071060 None:intergenic
GTCTAATTCTCCCAACAATT+TGG 0.196750 7_1:+69070425 None:intergenic
TCCTTGAGGCCATATGATTT+TGG 0.205239 7_1:+69070770 None:intergenic
CTCAAGGAAATGATCGTTTC+TGG 0.227781 7_1:-69070755 Msa1033800:intron
ACTTCCCTTATATGAATCTT+TGG 0.231965 7_1:-69070835 Msa1033800:CDS
TGACATCCAAGCATAGTTAA+TGG 0.255056 7_1:+69070801 None:intergenic
CTTTGTGACAAAGTTATCTT+TGG 0.265197 7_1:-69070948 Msa1033800:CDS
AGAGATGGATGAGAAGGATT+TGG 0.277633 7_1:-69070292 Msa1033800:CDS
CTTGAAATTAATTCCACAAT+AGG 0.286246 7_1:+69069735 None:intergenic
TCCTCATTCACAAGCTCTTT+TGG 0.293314 7_1:+69069853 None:intergenic
GATATCCAAAGATTCATATA+AGG 0.300354 7_1:+69070830 None:intergenic
TAGGCTTCCATGCGTGAAAT+AGG 0.309671 7_1:+69069754 None:intergenic
GAGATGGATGAGAAGGATTT+GGG 0.312045 7_1:-69070291 Msa1033800:CDS
CATCAGCTAAATAATCTAAA+TGG 0.337511 7_1:-69070228 Msa1033800:CDS
ACACCATCCTCTTTGCTATA+TGG 0.353410 7_1:+69070403 None:intergenic
TCCTCCTTTGTTGTCTTAGC+AGG 0.355615 7_1:-69070153 Msa1033800:CDS
TGCAGCTGAGTATCTTGTTT+TGG 0.369474 7_1:+69069909 None:intergenic
CAAGCATAGTTAATGGATCT+TGG 0.392821 7_1:+69070808 None:intergenic
AGAATTCTTCAAGCTCCCTT+TGG 0.396656 7_1:-69070919 Msa1033800:CDS
TTATCTTCGTTTCTTTCAAA+AGG 0.400825 7_1:-69069791 Msa1033800:CDS
TGATTCATTCATATTGTTGA+AGG 0.421437 7_1:+69069712 None:intergenic
AATGAGTACTCCAAATTGTT+GGG 0.430080 7_1:-69070435 Msa1033800:CDS
CTGATGTACTACAGATATAA+TGG 0.431408 7_1:+69070245 None:intergenic
CAATGAGTACTCCAAATTGT+TGG 0.439883 7_1:-69070436 Msa1033800:CDS
CAAGATCCATTAACTATGCT+TGG 0.444301 7_1:-69070807 Msa1033800:CDS
AGAAACGAAGATAATCATAA+TGG 0.454691 7_1:+69069800 None:intergenic
AAATATTCACCAAAATCATA+TGG 0.463691 7_1:-69070779 Msa1033800:CDS
AAGACTTCACTAGAAGACTA+TGG 0.470131 7_1:-69071008 Msa1033800:CDS
ATATCCAAAGATTCATATAA+GGG 0.472934 7_1:+69070831 None:intergenic
AACAAGAGAGATGGATGAGA+AGG 0.485145 7_1:-69070298 Msa1033800:CDS
ACCAAAAGAGCTTGTGAATG+AGG 0.492543 7_1:-69069854 Msa1033800:CDS
CTTAGCAGGTGACGCATTCA+CGG 0.492976 7_1:-69070139 Msa1033800:intron
AGACCTTTCCATGGCTACTC+AGG 0.493237 7_1:-69070870 Msa1033800:CDS
GTAGCACACTATGATAAAGT+TGG 0.506225 7_1:-69070978 Msa1033800:CDS
TGGTTGGACAAGTCAACGAC+AGG 0.507716 7_1:+69071080 None:intergenic
GAGACCCATGTGTCAGTACC+AGG 0.507954 7_1:+69071047 None:intergenic
TAATCATAATGGTCGAATGT+TGG 0.528563 7_1:+69069811 None:intergenic
ACCAAAATCATATGGCCTCA+AGG 0.544014 7_1:-69070771 Msa1033800:CDS
GAATGTTGGTTTAAAACGCA+AGG 0.545143 7_1:+69069825 None:intergenic
TCACGCATGGAAGCCTATTG+TGG 0.551906 7_1:-69069748 Msa1033800:CDS
TGGTGAATGGACTGAGGTTG+AGG 0.559321 7_1:-69070184 Msa1033800:CDS
GAAAGAACCTATTTCACGCA+TGG 0.566650 7_1:-69069761 Msa1033800:CDS
AGAGTTGTCCTGAGTAGCCA+TGG 0.568925 7_1:+69070862 None:intergenic
GAAATATAGAACAAGAGAGA+TGG 0.576102 7_1:-69070307 Msa1033800:CDS
TGAAACCTGGTACTGACACA+TGG 0.585719 7_1:-69071052 Msa1033800:CDS
TCCAACCAAAACATGAAACC+TGG 0.600317 7_1:-69071065 Msa1033800:CDS
GACAACAAAGGAGGAAGGTG+AGG 0.605347 7_1:+69070161 None:intergenic
GCTAGATATGGAGTAACGGA+AGG 0.611665 7_1:-69069969 Msa1033800:intron
AATGTTGGTTTAAAACGCAA+GGG 0.621011 7_1:+69069826 None:intergenic
ATTTGCTAGATATGGAGTAA+CGG 0.622192 7_1:-69069973 Msa1033800:intron
ATAATGGTCAAGTCTGAATG+AGG 0.623723 7_1:+69070261 None:intergenic
TGTCCTGAGTAGCCATGGAA+AGG 0.627328 7_1:+69070867 None:intergenic
ATAAGTGATAGACCTTTCCA+TGG 0.632144 7_1:-69070879 Msa1033800:CDS
GAAACCTGGTACTGACACAT+GGG 0.636146 7_1:-69071051 Msa1033800:CDS
AGACCATATAGCAAAGAGGA+TGG 0.638381 7_1:-69070406 Msa1033800:CDS
GCTAAGACAACAAAGGAGGA+AGG 0.646880 7_1:+69070156 None:intergenic
AGGATGGTGTTTGAAAGCTA+TGG 0.649282 7_1:-69070390 Msa1033800:CDS
CAGAAACGATCATTTCCTTG+AGG 0.669988 7_1:+69070756 None:intergenic
ACCTGCTAAGACAACAAAGG+AGG 0.674762 7_1:+69070152 None:intergenic
AATTAGACCATATAGCAAAG+AGG 0.678010 7_1:-69070410 Msa1033800:CDS
GGTTGGACAAGTCAACGACA+GGG 0.686695 7_1:+69071081 None:intergenic
GTCACCTGCTAAGACAACAA+AGG 0.733687 7_1:+69070149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAATAAATATATATTTTGA+TGG + chr7_1:69070332-69070351 None:intergenic 10.0%
!!! TCAATAAATATATATTTTGA+TGG + chr7_1:69070332-69070351 None:intergenic 10.0%
!! ATATCCAAAGATTCATATAA+GGG + chr7_1:69070002-69070021 None:intergenic 20.0%
!! AAATATTCACCAAAATCATA+TGG - chr7_1:69070051-69070070 Msa1033800:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+TGG - chr7_1:69070229-69070248 Msa1033800:CDS 20.0%
!! TTGCAAATCAAATTGAAAAA+TGG - chr7_1:69070626-69070645 Msa1033800:intron 20.0%
!! TCTCAATCATAAACATTAAT+TGG - chr7_1:69070730-69070749 Msa1033800:intron 20.0%
!!! TATTTTTCATTTGCTAGATA+TGG - chr7_1:69070849-69070868 Msa1033800:CDS 20.0%
!! ATATCCAAAGATTCATATAA+GGG + chr7_1:69070002-69070021 None:intergenic 20.0%
!! AAATATTCACCAAAATCATA+TGG - chr7_1:69070051-69070070 Msa1033800:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+TGG - chr7_1:69070229-69070248 Msa1033800:CDS 20.0%
!! TTGCAAATCAAATTGAAAAA+TGG - chr7_1:69070626-69070645 Msa1033800:intron 20.0%
!! TCTCAATCATAAACATTAAT+TGG - chr7_1:69070730-69070749 Msa1033800:intron 20.0%
!!! TATTTTTCATTTGCTAGATA+TGG - chr7_1:69070849-69070868 Msa1033800:CDS 20.0%
! GATATCCAAAGATTCATATA+AGG + chr7_1:69070003-69070022 None:intergenic 25.0%
! TGCTTCATGAATCTATATTA+TGG + chr7_1:69070115-69070134 None:intergenic 25.0%
! CATCAGCTAAATAATCTAAA+TGG - chr7_1:69070602-69070621 Msa1033800:intron 25.0%
! TCAAATTGAAAAATGGTGAA+TGG - chr7_1:69070633-69070652 Msa1033800:intron 25.0%
! GGTCTAAAAAATAATTGTCT+TGG - chr7_1:69070751-69070770 Msa1033800:intron 25.0%
! TATCTCTTCTAATTTAACCT+AGG - chr7_1:69070805-69070824 Msa1033800:CDS 25.0%
!! TTCTTTTGCTAGTAAGATTA+TGG - chr7_1:69070949-69070968 Msa1033800:CDS 25.0%
! AGAAACGAAGATAATCATAA+TGG + chr7_1:69071033-69071052 None:intergenic 25.0%
! TTATCTTCGTTTCTTTCAAA+AGG - chr7_1:69071039-69071058 Msa1033800:CDS 25.0%
! CTTGAAATTAATTCCACAAT+AGG + chr7_1:69071098-69071117 None:intergenic 25.0%
! GATATCCAAAGATTCATATA+AGG + chr7_1:69070003-69070022 None:intergenic 25.0%
! TGCTTCATGAATCTATATTA+TGG + chr7_1:69070115-69070134 None:intergenic 25.0%
! CATCAGCTAAATAATCTAAA+TGG - chr7_1:69070602-69070621 Msa1033800:intron 25.0%
! TCAAATTGAAAAATGGTGAA+TGG - chr7_1:69070633-69070652 Msa1033800:intron 25.0%
! GGTCTAAAAAATAATTGTCT+TGG - chr7_1:69070751-69070770 Msa1033800:intron 25.0%
! TATCTCTTCTAATTTAACCT+AGG - chr7_1:69070805-69070824 Msa1033800:CDS 25.0%
!! TTCTTTTGCTAGTAAGATTA+TGG - chr7_1:69070949-69070968 Msa1033800:CDS 25.0%
! AGAAACGAAGATAATCATAA+TGG + chr7_1:69071033-69071052 None:intergenic 25.0%
! TTATCTTCGTTTCTTTCAAA+AGG - chr7_1:69071039-69071058 Msa1033800:CDS 25.0%
! CTTGAAATTAATTCCACAAT+AGG + chr7_1:69071098-69071117 None:intergenic 25.0%
CTTTGTGACAAAGTTATCTT+TGG - chr7_1:69069882-69069901 Msa1033800:CDS 30.0%
ACTTCCCTTATATGAATCTT+TGG - chr7_1:69069995-69070014 Msa1033800:intron 30.0%
TCTCAAATTATTAGTGGTCT+CGG - chr7_1:69070235-69070254 Msa1033800:CDS 30.0%
AATGAGTACTCCAAATTGTT+GGG - chr7_1:69070395-69070414 Msa1033800:CDS 30.0%
AATTAGACCATATAGCAAAG+AGG - chr7_1:69070420-69070439 Msa1033800:CDS 30.0%
GAAATATAGAACAAGAGAGA+TGG - chr7_1:69070523-69070542 Msa1033800:intron 30.0%
CTGATGTACTACAGATATAA+TGG + chr7_1:69070588-69070607 None:intergenic 30.0%
TCATCTAAACATTGTTGAGT+CGG + chr7_1:69070778-69070797 None:intergenic 30.0%
! ATTTGCTAGATATGGAGTAA+CGG - chr7_1:69070857-69070876 Msa1033800:CDS 30.0%
!! AATGTTGGTTTAAAACGCAA+GGG + chr7_1:69071007-69071026 None:intergenic 30.0%
TAATCATAATGGTCGAATGT+TGG + chr7_1:69071022-69071041 None:intergenic 30.0%
CTTTGTGACAAAGTTATCTT+TGG - chr7_1:69069882-69069901 Msa1033800:CDS 30.0%
ACTTCCCTTATATGAATCTT+TGG - chr7_1:69069995-69070014 Msa1033800:intron 30.0%
TCTCAAATTATTAGTGGTCT+CGG - chr7_1:69070235-69070254 Msa1033800:CDS 30.0%
AATGAGTACTCCAAATTGTT+GGG - chr7_1:69070395-69070414 Msa1033800:CDS 30.0%
AATTAGACCATATAGCAAAG+AGG - chr7_1:69070420-69070439 Msa1033800:CDS 30.0%
GAAATATAGAACAAGAGAGA+TGG - chr7_1:69070523-69070542 Msa1033800:intron 30.0%
CTGATGTACTACAGATATAA+TGG + chr7_1:69070588-69070607 None:intergenic 30.0%
TCATCTAAACATTGTTGAGT+CGG + chr7_1:69070778-69070797 None:intergenic 30.0%
! ATTTGCTAGATATGGAGTAA+CGG - chr7_1:69070857-69070876 Msa1033800:CDS 30.0%
!! AATGTTGGTTTAAAACGCAA+GGG + chr7_1:69071007-69071026 None:intergenic 30.0%
TAATCATAATGGTCGAATGT+TGG + chr7_1:69071022-69071041 None:intergenic 30.0%
AAGACTTCACTAGAAGACTA+TGG - chr7_1:69069822-69069841 Msa1033800:CDS 35.0%
GTAGCACACTATGATAAAGT+TGG - chr7_1:69069852-69069871 Msa1033800:CDS 35.0%
!! TTTGCGCTTTTGTTTCCAAA+GGG + chr7_1:69069929-69069948 None:intergenic 35.0%
!! TTTTGCGCTTTTGTTTCCAA+AGG + chr7_1:69069930-69069949 None:intergenic 35.0%
ATAAGTGATAGACCTTTCCA+TGG - chr7_1:69069951-69069970 Msa1033800:CDS 35.0%
! CAAGCATAGTTAATGGATCT+TGG + chr7_1:69070025-69070044 None:intergenic 35.0%
CAAGATCCATTAACTATGCT+TGG - chr7_1:69070023-69070042 Msa1033800:intron 35.0%
TGACATCCAAGCATAGTTAA+TGG + chr7_1:69070032-69070051 None:intergenic 35.0%
GAGAATATGAAGCACAGATA+CGG + chr7_1:69070296-69070315 None:intergenic 35.0%
CAATGAGTACTCCAAATTGT+TGG - chr7_1:69070394-69070413 Msa1033800:CDS 35.0%
GTCTAATTCTCCCAACAATT+TGG + chr7_1:69070408-69070427 None:intergenic 35.0%
ATAATGGTCAAGTCTGAATG+AGG + chr7_1:69070572-69070591 None:intergenic 35.0%
TATATTTAGACTCGAGACCT+AGG + chr7_1:69070825-69070844 None:intergenic 35.0%
!! GAATGTTGGTTTAAAACGCA+AGG + chr7_1:69071008-69071027 None:intergenic 35.0%
AAGACTTCACTAGAAGACTA+TGG - chr7_1:69069822-69069841 Msa1033800:CDS 35.0%
GTAGCACACTATGATAAAGT+TGG - chr7_1:69069852-69069871 Msa1033800:CDS 35.0%
!! TTTGCGCTTTTGTTTCCAAA+GGG + chr7_1:69069929-69069948 None:intergenic 35.0%
!! TTTTGCGCTTTTGTTTCCAA+AGG + chr7_1:69069930-69069949 None:intergenic 35.0%
ATAAGTGATAGACCTTTCCA+TGG - chr7_1:69069951-69069970 Msa1033800:CDS 35.0%
! CAAGCATAGTTAATGGATCT+TGG + chr7_1:69070025-69070044 None:intergenic 35.0%
CAAGATCCATTAACTATGCT+TGG - chr7_1:69070023-69070042 Msa1033800:intron 35.0%
TGACATCCAAGCATAGTTAA+TGG + chr7_1:69070032-69070051 None:intergenic 35.0%
GAGAATATGAAGCACAGATA+CGG + chr7_1:69070296-69070315 None:intergenic 35.0%
CAATGAGTACTCCAAATTGT+TGG - chr7_1:69070394-69070413 Msa1033800:CDS 35.0%
GTCTAATTCTCCCAACAATT+TGG + chr7_1:69070408-69070427 None:intergenic 35.0%
ATAATGGTCAAGTCTGAATG+AGG + chr7_1:69070572-69070591 None:intergenic 35.0%
TATATTTAGACTCGAGACCT+AGG + chr7_1:69070825-69070844 None:intergenic 35.0%
!! GAATGTTGGTTTAAAACGCA+AGG + chr7_1:69071008-69071027 None:intergenic 35.0%
TCCAACCAAAACATGAAACC+TGG - chr7_1:69069765-69069784 Msa1033800:CDS 40.0%
!!! ACCAGGTTTCATGTTTTGGT+TGG + chr7_1:69069769-69069788 None:intergenic 40.0%
! CAGTACCAGGTTTCATGTTT+TGG + chr7_1:69069773-69069792 None:intergenic 40.0%
AGAATTCTTCAAGCTCCCTT+TGG - chr7_1:69069911-69069930 Msa1033800:CDS 40.0%
ACCAAAATCATATGGCCTCA+AGG - chr7_1:69070059-69070078 Msa1033800:intron 40.0%
! TCCTTGAGGCCATATGATTT+TGG + chr7_1:69070063-69070082 None:intergenic 40.0%
CAGAAACGATCATTTCCTTG+AGG + chr7_1:69070077-69070096 None:intergenic 40.0%
CTCAAGGAAATGATCGTTTC+TGG - chr7_1:69070075-69070094 Msa1033800:intron 40.0%
!! AGGAAATGATCGTTTCTGGT+TGG - chr7_1:69070079-69070098 Msa1033800:intron 40.0%
AGACCATATAGCAAAGAGGA+TGG - chr7_1:69070424-69070443 Msa1033800:CDS 40.0%
! ACACCATCCTCTTTGCTATA+TGG + chr7_1:69070430-69070449 None:intergenic 40.0%
AGGATGGTGTTTGAAAGCTA+TGG - chr7_1:69070440-69070459 Msa1033800:CDS 40.0%
AACAAGAGAGATGGATGAGA+AGG - chr7_1:69070532-69070551 Msa1033800:intron 40.0%
AGAGATGGATGAGAAGGATT+TGG - chr7_1:69070538-69070557 Msa1033800:intron 40.0%
GAGATGGATGAGAAGGATTT+GGG - chr7_1:69070539-69070558 Msa1033800:intron 40.0%
!! GAAAAATGGTGAATGGACTG+AGG - chr7_1:69070640-69070659 Msa1033800:intron 40.0%
!! TGCAGCTGAGTATCTTGTTT+TGG + chr7_1:69070924-69070943 None:intergenic 40.0%
ACCAAAAGAGCTTGTGAATG+AGG - chr7_1:69070976-69070995 Msa1033800:CDS 40.0%
! TCCTCATTCACAAGCTCTTT+TGG + chr7_1:69070980-69070999 None:intergenic 40.0%
GAAAGAACCTATTTCACGCA+TGG - chr7_1:69071069-69071088 Msa1033800:CDS 40.0%
TCCAACCAAAACATGAAACC+TGG - chr7_1:69069765-69069784 Msa1033800:CDS 40.0%
!!! ACCAGGTTTCATGTTTTGGT+TGG + chr7_1:69069769-69069788 None:intergenic 40.0%
! CAGTACCAGGTTTCATGTTT+TGG + chr7_1:69069773-69069792 None:intergenic 40.0%
AGAATTCTTCAAGCTCCCTT+TGG - chr7_1:69069911-69069930 Msa1033800:CDS 40.0%
ACCAAAATCATATGGCCTCA+AGG - chr7_1:69070059-69070078 Msa1033800:intron 40.0%
! TCCTTGAGGCCATATGATTT+TGG + chr7_1:69070063-69070082 None:intergenic 40.0%
CAGAAACGATCATTTCCTTG+AGG + chr7_1:69070077-69070096 None:intergenic 40.0%
CTCAAGGAAATGATCGTTTC+TGG - chr7_1:69070075-69070094 Msa1033800:intron 40.0%
!! AGGAAATGATCGTTTCTGGT+TGG - chr7_1:69070079-69070098 Msa1033800:intron 40.0%
AGACCATATAGCAAAGAGGA+TGG - chr7_1:69070424-69070443 Msa1033800:CDS 40.0%
! ACACCATCCTCTTTGCTATA+TGG + chr7_1:69070430-69070449 None:intergenic 40.0%
AGGATGGTGTTTGAAAGCTA+TGG - chr7_1:69070440-69070459 Msa1033800:CDS 40.0%
AACAAGAGAGATGGATGAGA+AGG - chr7_1:69070532-69070551 Msa1033800:intron 40.0%
AGAGATGGATGAGAAGGATT+TGG - chr7_1:69070538-69070557 Msa1033800:intron 40.0%
GAGATGGATGAGAAGGATTT+GGG - chr7_1:69070539-69070558 Msa1033800:intron 40.0%
!! GAAAAATGGTGAATGGACTG+AGG - chr7_1:69070640-69070659 Msa1033800:intron 40.0%
!! TGCAGCTGAGTATCTTGTTT+TGG + chr7_1:69070924-69070943 None:intergenic 40.0%
ACCAAAAGAGCTTGTGAATG+AGG - chr7_1:69070976-69070995 Msa1033800:CDS 40.0%
! TCCTCATTCACAAGCTCTTT+TGG + chr7_1:69070980-69070999 None:intergenic 40.0%
GAAAGAACCTATTTCACGCA+TGG - chr7_1:69071069-69071088 Msa1033800:CDS 40.0%
!! TGAAACCTGGTACTGACACA+TGG - chr7_1:69069778-69069797 Msa1033800:CDS 45.0%
!! GAAACCTGGTACTGACACAT+GGG - chr7_1:69069779-69069798 Msa1033800:CDS 45.0%
TCCTCGGATTAAACATGTCC+CGG - chr7_1:69070142-69070161 Msa1033800:CDS 45.0%
TATCAGTGTCGTGTCTGTGT+CGG + chr7_1:69070187-69070206 None:intergenic 45.0%
ACAGATACGGACACAGACAT+CGG + chr7_1:69070283-69070302 None:intergenic 45.0%
GCTAAGACAACAAAGGAGGA+AGG + chr7_1:69070677-69070696 None:intergenic 45.0%
! TCCTCCTTTGTTGTCTTAGC+AGG - chr7_1:69070677-69070696 Msa1033800:intron 45.0%
ACCTGCTAAGACAACAAAGG+AGG + chr7_1:69070681-69070700 None:intergenic 45.0%
GTCACCTGCTAAGACAACAA+AGG + chr7_1:69070684-69070703 None:intergenic 45.0%
! GCTAGATATGGAGTAACGGA+AGG - chr7_1:69070861-69070880 Msa1033800:CDS 45.0%
TAGGCTTCCATGCGTGAAAT+AGG + chr7_1:69071079-69071098 None:intergenic 45.0%
!! TGAAACCTGGTACTGACACA+TGG - chr7_1:69069778-69069797 Msa1033800:CDS 45.0%
!! GAAACCTGGTACTGACACAT+GGG - chr7_1:69069779-69069798 Msa1033800:CDS 45.0%
TCCTCGGATTAAACATGTCC+CGG - chr7_1:69070142-69070161 Msa1033800:CDS 45.0%
TATCAGTGTCGTGTCTGTGT+CGG + chr7_1:69070187-69070206 None:intergenic 45.0%
ACAGATACGGACACAGACAT+CGG + chr7_1:69070283-69070302 None:intergenic 45.0%
GCTAAGACAACAAAGGAGGA+AGG + chr7_1:69070677-69070696 None:intergenic 45.0%
! TCCTCCTTTGTTGTCTTAGC+AGG - chr7_1:69070677-69070696 Msa1033800:intron 45.0%
ACCTGCTAAGACAACAAAGG+AGG + chr7_1:69070681-69070700 None:intergenic 45.0%
GTCACCTGCTAAGACAACAA+AGG + chr7_1:69070684-69070703 None:intergenic 45.0%
! GCTAGATATGGAGTAACGGA+AGG - chr7_1:69070861-69070880 Msa1033800:CDS 45.0%
TAGGCTTCCATGCGTGAAAT+AGG + chr7_1:69071079-69071098 None:intergenic 45.0%
GGTTGGACAAGTCAACGACA+GGG + chr7_1:69069752-69069771 None:intergenic 50.0%
TGGTTGGACAAGTCAACGAC+AGG + chr7_1:69069753-69069772 None:intergenic 50.0%
AGACCTTTCCATGGCTACTC+AGG - chr7_1:69069960-69069979 Msa1033800:CDS 50.0%
TGTCCTGAGTAGCCATGGAA+AGG + chr7_1:69069966-69069985 None:intergenic 50.0%
AGAGTTGTCCTGAGTAGCCA+TGG + chr7_1:69069971-69069990 None:intergenic 50.0%
CATGAAGCACAGACACTCCT+CGG - chr7_1:69070126-69070145 Msa1033800:intron 50.0%
ACCGGGACATGTTTAATCCG+AGG + chr7_1:69070146-69070165 None:intergenic 50.0%
ACACAACACGTGTCTGACAC+CGG + chr7_1:69070164-69070183 None:intergenic 50.0%
!! TGGTGAATGGACTGAGGTTG+AGG - chr7_1:69070646-69070665 Msa1033800:intron 50.0%
GACAACAAAGGAGGAAGGTG+AGG + chr7_1:69070672-69070691 None:intergenic 50.0%
CTTAGCAGGTGACGCATTCA+CGG - chr7_1:69070691-69070710 Msa1033800:intron 50.0%
TCACGCATGGAAGCCTATTG+TGG - chr7_1:69071082-69071101 Msa1033800:CDS 50.0%
GGTTGGACAAGTCAACGACA+GGG + chr7_1:69069752-69069771 None:intergenic 50.0%
TGGTTGGACAAGTCAACGAC+AGG + chr7_1:69069753-69069772 None:intergenic 50.0%
AGACCTTTCCATGGCTACTC+AGG - chr7_1:69069960-69069979 Msa1033800:CDS 50.0%
TGTCCTGAGTAGCCATGGAA+AGG + chr7_1:69069966-69069985 None:intergenic 50.0%
AGAGTTGTCCTGAGTAGCCA+TGG + chr7_1:69069971-69069990 None:intergenic 50.0%
CATGAAGCACAGACACTCCT+CGG - chr7_1:69070126-69070145 Msa1033800:intron 50.0%
ACCGGGACATGTTTAATCCG+AGG + chr7_1:69070146-69070165 None:intergenic 50.0%
ACACAACACGTGTCTGACAC+CGG + chr7_1:69070164-69070183 None:intergenic 50.0%
!! TGGTGAATGGACTGAGGTTG+AGG - chr7_1:69070646-69070665 Msa1033800:intron 50.0%
GACAACAAAGGAGGAAGGTG+AGG + chr7_1:69070672-69070691 None:intergenic 50.0%
CTTAGCAGGTGACGCATTCA+CGG - chr7_1:69070691-69070710 Msa1033800:intron 50.0%
TCACGCATGGAAGCCTATTG+TGG - chr7_1:69071082-69071101 Msa1033800:CDS 50.0%
GAGACCCATGTGTCAGTACC+AGG + chr7_1:69069786-69069805 None:intergenic 55.0%
CACAACACGTGTCTGACACC+GGG + chr7_1:69070163-69070182 None:intergenic 55.0%
CACAGACATCGGACACGACA+CGG + chr7_1:69070272-69070291 None:intergenic 55.0%
GAGACCCATGTGTCAGTACC+AGG + chr7_1:69069786-69069805 None:intergenic 55.0%
CACAACACGTGTCTGACACC+GGG + chr7_1:69070163-69070182 None:intergenic 55.0%
CACAGACATCGGACACGACA+CGG + chr7_1:69070272-69070291 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 69069720 69071132 69069720 ID=Msa1033800;Name=Msa1033800
chr7_1 mRNA 69069720 69071132 69069720 ID=Msa1033800-mRNA-1;Parent=Msa1033800;Name=Msa1033800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|323
chr7_1 exon 69070756 69071132 69070756 ID=Msa1033800-mRNA-1:exon:16219;Parent=Msa1033800-mRNA-1
chr7_1 exon 69070140 69070467 69070140 ID=Msa1033800-mRNA-1:exon:16218;Parent=Msa1033800-mRNA-1
chr7_1 exon 69069720 69069986 69069720 ID=Msa1033800-mRNA-1:exon:16217;Parent=Msa1033800-mRNA-1
chr7_1 CDS 69070756 69071132 69070756 ID=Msa1033800-mRNA-1:cds;Parent=Msa1033800-mRNA-1
chr7_1 CDS 69070140 69070467 69070140 ID=Msa1033800-mRNA-1:cds;Parent=Msa1033800-mRNA-1
chr7_1 CDS 69069720 69069986 69069720 ID=Msa1033800-mRNA-1:cds;Parent=Msa1033800-mRNA-1
Gene Sequence

>Msa1033800

ATGGGATCAGAAACAGTCTCTCAAATAATCCCTGTCGTTGACTTGTCCAACCAAAACATGAAACCTGGTACTGACACATGGGTCTCAGCTTGCAATTTTATGAAGACTTCACTAGAAGACTATGGTTGTTTCGTAGCACACTATGATAAAGTTGGCAAAGATCTTTGTGACAAAGTTATCTTTGGAATTGAAGAATTCTTCAAGCTCCCTTTGGAAACAAAAGCGCAAAAGATAAGTGATAGACCTTTCCATGGCTACTCAGGACAACTCTCAACACTTCCCTTATATGAATCTTTGGATATCCAAGATCCATTAACTATGCTTGGATGTCAAATATTCACCAAAATCATATGGCCTCAAGGAAATGATCGTTTCTGCGAAAGCTTCAATGAGTACTCCAAATTGTTGGGAGAATTAGACCATATAGCAAAGAGGATGGTGTTTGAAAGCTATGGTGTTGATATGAAAATATGTGAATCATTGATAGAATCAAGCAATTATCTCATTCGATGCTTGAAATATAGAACAAGAGAGATGGATGAGAAGGATTTGGGATTAACACCTCATTCAGACTTGACCATTATATCTGTAGTACATCAGCTAAATAATCTAAATGGCTTGCAAATCAAATTGAAAAATGGTGAATGGACTGAGGTTGAGGCCTCACCTTCCTCCTTTGTTGTCTTAGCAGGTGACGCATTCACGATATGGAGTAACGGAAGGATACGTGCATGTGAACATAGAGTTATAATGAATGCAACCAAAACAAGATACTCAGCTGCATTATTTTCTTTTGCTAGTAAGATTATGGAGATACCAAAAGAGCTTGTGAATGAGGAACATCCCTTGCGTTTTAAACCAACATTCGACCATTATGATTATCTTCGTTTCTTTCAAAAGGAAAAAATGAAAGAACCTATTTCACGCATGGAAGCCTATTGTGGAATTAATTTCAAGCCTTCAACAATATGA
Protein sequence

>Msa1033800

MGSETVSQIIPVVDLSNQNMKPGTDTWVSACNFMKTSLEDYGCFVAHYDKVGKDLCDKVIFGIEEFFKLPLETKAQKISDRPFHGYSGQLSTLPLYESLDIQDPLTMLGCQIFTKIIWPQGNDRFCESFNEYSKLLGELDHIAKRMVFESYGVDMKICESLIESSNYLIRCLKYRTREMDEKDLGLTPHSDLTIISVVHQLNNLNGLQIKLKNGEWTEVEASPSSFVVLAGDAFTIWSNGRIRACEHRVIMNATKTRYSAALFSFASKIMEIPKELVNEEHPLRFKPTFDHYDYLRFFQKEKMKEPISRMEAYCGINFKPSTI*