AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036240 MtrunA17_Chr7g0260511 92.654 667 27 7 1 657 1 655 0.0 1179
Msa1036240 MtrunA17_Chr1g0184931 48.518 742 261 30 4 655 12 722 1.33e-178 525
Msa1036240 MtrunA17_Chr6g0454791 25.687 728 311 31 94 634 207 891 2.67e-20 95.9
Msa1036240 MtrunA17_Chr7g0219501 28.340 247 128 10 435 635 670 913 2.71e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036240 AT3G63430.1 38.462 663 262 28 13 655 4 540 1.50e-108 338
Msa1036240 AT3G63430.2 37.438 609 242 23 62 655 24 508 8.15e-100 315
Msa1036240 AT5G15580.1 26.648 728 329 32 80 633 210 906 8.28e-23 104
Msa1036240 AT3G02170.1 25.641 273 116 10 438 631 637 901 2.91e-12 70.5

Find 146 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCACCCTATTTGTTTC+TGG 0.045671 7_1:-72599392 None:intergenic
ATATAATTTGGTAAGATTTA+TGG 0.146030 7_1:+72599145 Msa1036240:five_prime_UTR
CACCACCGGTTTCCACTTTC+CGG 0.150303 7_1:+72600354 Msa1036240:CDS
GGTGAGTTACCGTTTGTTTC+AGG 0.227656 7_1:-72599573 None:intergenic
TCAATGCTTCGTTTCATTAC+TGG 0.237930 7_1:-72600928 None:intergenic
AAACAAATCCAGAAACAAAT+AGG 0.244433 7_1:+72599384 Msa1036240:CDS
GGTTGCGGTGTTGATGTTTC+TGG 0.252916 7_1:-72599609 None:intergenic
CGCCGACATTACATAGTATT+TGG 0.259466 7_1:+72602218 Msa1036240:CDS
CTTTGTCGAATTGCTTTAAC+TGG 0.260326 7_1:-72599950 None:intergenic
AAGCGGGAGTGTAGAATAAA+AGG 0.263724 7_1:+72599190 Msa1036240:five_prime_UTR
AAAATGTTCGGTAACTTGTT+TGG 0.275560 7_1:+72599091 Msa1036240:five_prime_UTR
AGAAGCTTACGGTTTGGGTT+AGG 0.276812 7_1:-72599852 None:intergenic
ATCTTAGAAGCTTACGGTTT+GGG 0.286049 7_1:-72599857 None:intergenic
CTTTCAACTGCAACGCTTCA+AGG 0.299931 7_1:-72600187 None:intergenic
AAATGTTCGGTAACTTGTTT+GGG 0.313089 7_1:+72599092 Msa1036240:five_prime_UTR
AGAAAGTAGTGAGTAAACTA+TGG 0.329527 7_1:-72602622 None:intergenic
GCGACTGGTTCGGTGATTGC+CGG 0.341848 7_1:-72600532 None:intergenic
GTTCGATTAATTGATCTTCC+TGG 0.348788 7_1:-72600308 None:intergenic
AGTGAATGTCACGTGGAAAT+TGG 0.362628 7_1:+72602340 Msa1036240:CDS
CGATAGTCTTGGAGCTTCTC+TGG 0.371195 7_1:-72599697 None:intergenic
ATAGTATTTGGTCGGAATTT+CGG 0.372916 7_1:+72602230 Msa1036240:CDS
CCGAGAGAGGGAAGAGTTAG+AGG 0.373133 7_1:+72602258 Msa1036240:CDS
ACACGATGCTAAATCTCTAA+TGG 0.378498 7_1:-72602416 None:intergenic
TGGTTCGGTGATTGCCGGTT+CGG 0.379807 7_1:-72600527 None:intergenic
CTCATCCTCGGCGACTGGTT+CGG 0.381228 7_1:-72600542 None:intergenic
TGGAAGTGTCGTTTCCTTTG+AGG 0.383887 7_1:-72602102 None:intergenic
GAAGCTTACGGTTTGGGTTA+GGG 0.389200 7_1:-72599851 None:intergenic
AAACGAAGCATTGAATATAA+AGG 0.393235 7_1:+72600937 Msa1036240:CDS
CCTGGCTTCATAACCACAAT+AGG 0.394306 7_1:-72600290 None:intergenic
GAGGAACATGTCATTGTCTT+CGG 0.395857 7_1:-72602059 None:intergenic
TTACGGTTTGGGTTAGGGTT+TGG 0.398639 7_1:-72599846 None:intergenic
GATGAGTCAAGAACCGATAC+TGG 0.401223 7_1:-72600871 None:intergenic
AAGTCGAAAACCGGAAGAAC+CGG 0.411755 7_1:-72599642 None:intergenic
GATCTTAGAAGCTTACGGTT+TGG 0.428139 7_1:-72599858 None:intergenic
AGGAACATGTCATTGTCTTC+GGG 0.437859 7_1:-72602058 None:intergenic
CCTTCTTTGAAGTCGAAAAC+CGG 0.439128 7_1:-72599651 None:intergenic
GAAACAGTACCACTCTGTTT+CGG 0.441495 7_1:-72600083 None:intergenic
AGTGGTACTGTTTCAGTTCA+AGG 0.444101 7_1:+72600092 Msa1036240:CDS
ACGGTGGCAAATGGCGTTTA+CGG 0.447266 7_1:-72602180 None:intergenic
TTCGAACCCGTGGTTTAGAC+CGG 0.448550 7_1:-72600373 None:intergenic
AAGCAGATCTTAGAAGCTTA+CGG 0.449577 7_1:-72599863 None:intergenic
CCACATTCCACGGTGGCAAA+TGG 0.451367 7_1:-72602189 None:intergenic
CACTTTCCGGTCTAAACCAC+GGG 0.457966 7_1:+72600367 Msa1036240:CDS
GTTTCTGGTGTTGATTCAGC+TGG 0.462305 7_1:-72599594 None:intergenic
GGTAATCTTTCTCACGCGAT+TGG 0.462597 7_1:-72600456 None:intergenic
TTGCCATCGTTAAACATGCC+TGG 0.462799 7_1:-72602701 None:intergenic
AGAAAAGACACCGGTTCTTC+CGG 0.464456 7_1:+72599632 Msa1036240:CDS
GTAATCTTTCTCACGCGATT+GGG 0.464974 7_1:-72600455 None:intergenic
AACAAATCCAGAAACAAATA+GGG 0.468767 7_1:+72599385 Msa1036240:CDS
TAGAGATTTAGCATCGTGTA+AGG 0.469868 7_1:+72602420 Msa1036240:CDS
GATACCGTTGATATTGAAGA+AGG 0.470756 7_1:-72599477 None:intergenic
CACGCGATTGGGACTGCGCG+TGG 0.473066 7_1:-72600444 None:intergenic
ACATGAATGGAGAGAATGAA+TGG 0.474273 7_1:+72602317 Msa1036240:CDS
GACATGTTTGAAGTTATATG+TGG 0.480581 7_1:+72602280 Msa1036240:CDS
CTATGGGACTATTAAAGATA+AGG 0.487488 7_1:-72602605 None:intergenic
CAGCGTCGTTGCTAAACTCA+TGG 0.497335 7_1:+72599806 Msa1036240:CDS
GCTTCTCTGGTGAATTTCCA+TGG 0.499048 7_1:-72599684 None:intergenic
TTACTCCGGTTCATTCTTCG+AGG 0.499611 7_1:+72600498 Msa1036240:CDS
AAAGAAAATGACAAGAGAGA+TGG 0.500196 7_1:+72599338 Msa1036240:exon
GGAAGATCAATTAATCGAAC+CGG 0.500953 7_1:+72600311 Msa1036240:CDS
CCTCTAACTCTTCCCTCTCT+CGG 0.504630 7_1:-72602258 None:intergenic
CTGCTATCCAACGATAGTCT+TGG 0.504922 7_1:-72599708 None:intergenic
CTTCGAGGAGTGAACCGAAC+CGG 0.505772 7_1:+72600513 Msa1036240:CDS
AGAGCTATTGTAGATGCAAA+AGG 0.506765 7_1:+72599729 Msa1036240:CDS
CTTGAAGCGTTGCAGTTGAA+AGG 0.507291 7_1:+72600188 Msa1036240:CDS
AGTGTGTCAAGATCTTTAGA+AGG 0.510486 7_1:-72600155 None:intergenic
AGAATCATTTCCGATCCAAC+CGG 0.511036 7_1:-72600330 None:intergenic
GTACCACTCTGTTTCGGACC+AGG 0.513528 7_1:-72600077 None:intergenic
ATTAATCGAACCGGTTGGAT+CGG 0.513528 7_1:+72600320 Msa1036240:CDS
CGGAAATGATTCTCCACCAC+CGG 0.518307 7_1:+72600340 Msa1036240:CDS
ACTGTTGCTGTTCTAGTAAG+AGG 0.522882 7_1:-72602078 None:intergenic
CCTATTGTGGTTATGAAGCC+AGG 0.524389 7_1:+72600290 Msa1036240:CDS
TCTTTGAAGAGTGGAAACTT+TGG 0.525676 7_1:-72602122 None:intergenic
AACTGATCATATTCAACCGC+AGG 0.527228 7_1:+72600394 Msa1036240:CDS
AATGACAATCCATCCTAAAG+AGG 0.530978 7_1:+72599755 Msa1036240:CDS
AAACAAATAGGGTGCATGGC+AGG 0.533484 7_1:+72599396 Msa1036240:CDS
AAGGGAAAGAACTGTTGAAG+AGG 0.533515 7_1:+72600803 Msa1036240:CDS
CACATCTTCGATCGCCACCC+AGG 0.535206 7_1:+72599426 Msa1036240:CDS
TTACAGGAACCTGAAACAAA+CGG 0.536523 7_1:+72599564 Msa1036240:intron
GGCGCGTTCTCCACATTCCA+CGG 0.539262 7_1:-72602199 None:intergenic
AACTCTTCTGCGATCAACAT+TGG 0.545259 7_1:-72600477 None:intergenic
TCACTCCTCGAAGAATGAAC+CGG 0.546402 7_1:-72600503 None:intergenic
CCACTTTCCGGTCTAAACCA+CGG 0.547994 7_1:+72600366 Msa1036240:CDS
AATTAACCGTCTTTGAAGAG+TGG 0.548852 7_1:-72602131 None:intergenic
ACATGTTTGAAGTTATATGT+GGG 0.550892 7_1:+72602281 Msa1036240:CDS
CGGAAAGTGGAAACCGGTGG+TGG 0.550926 7_1:-72600353 None:intergenic
CCATTTGCCACCGTGGAATG+TGG 0.552073 7_1:+72602189 Msa1036240:CDS
GAAAGTAGTGAGTAAACTAT+GGG 0.555623 7_1:-72602621 None:intergenic
TGGAGGAGCAATACAGAGAA+GGG 0.555662 7_1:+72600785 Msa1036240:CDS
ATAATTAGGACAAAACATGA+AGG 0.555955 7_1:+72602488 Msa1036240:exon
TACTGTACAAACCTCTGTAT+CGG 0.563007 7_1:-72600633 None:intergenic
TTAGACCGGAAAGTGGAAAC+CGG 0.564549 7_1:-72600359 None:intergenic
AGAAGCTCCAAGACTATCGT+TGG 0.564980 7_1:+72599701 Msa1036240:CDS
ATTTCGGAGGGTCCGAGAGA+GGG 0.565100 7_1:+72602246 Msa1036240:CDS
GAGAAACGGTTGAAGATGCG+TGG 0.566325 7_1:+72600122 Msa1036240:CDS
CCAGAAACAAATAGGGTGCA+TGG 0.567162 7_1:+72599392 Msa1036240:CDS
GTGGAGGAGCAATACAGAGA+AGG 0.568563 7_1:+72600784 Msa1036240:CDS
CTCTGTATCGGTATGTGAAG+AGG 0.573522 7_1:-72600621 None:intergenic
GTTTGGGTTAGGGTTTGGAT+CGG 0.573652 7_1:-72599841 None:intergenic
GACATTACATAGTATTTGGT+CGG 0.574372 7_1:+72602222 Msa1036240:CDS
AAGTTTCCACTCTTCAAAGA+CGG 0.579203 7_1:+72602125 Msa1036240:CDS
AAGAAGGAACAAAATCTCCA+TGG 0.580634 7_1:+72599667 Msa1036240:CDS
CCGTGGTTTAGACCGGAAAG+TGG 0.580946 7_1:-72600366 None:intergenic
TTCAAGGTGAGATTGAGAAA+CGG 0.582405 7_1:+72600108 Msa1036240:CDS
ACAAAGTTTCAATGCTTCGT+AGG 0.587542 7_1:+72602452 Msa1036240:CDS
TGATTCTCAATCTCCTATTG+TGG 0.595801 7_1:+72600277 Msa1036240:CDS
AGCGTCGTTGCTAAACTCAT+GGG 0.597007 7_1:+72599807 Msa1036240:CDS
GAGTTTAGCAACGACGCTGG+TGG 0.598692 7_1:-72599802 None:intergenic
GAGGTTTAATAACAAGGTGG+AGG 0.599036 7_1:+72600768 Msa1036240:intron
ACAGTCAACACTGTAGTATG+TGG 0.599494 7_1:-72599225 None:intergenic
AGACCAACCGAGTCCAGTAT+CGG 0.600590 7_1:+72600858 Msa1036240:CDS
GATCAATTAATCGAACCGGT+TGG 0.601138 7_1:+72600315 Msa1036240:CDS
AGAAACGGTTGAAGATGCGT+GGG 0.602563 7_1:+72600123 Msa1036240:CDS
GTATTTGGTCGGAATTTCGG+AGG 0.603477 7_1:+72602233 Msa1036240:CDS
ACTCCCTTCTTCAATATCAA+CGG 0.605785 7_1:+72599473 Msa1036240:CDS
GAACAGCAACAGTACCTCAA+AGG 0.607442 7_1:+72602088 Msa1036240:CDS
TACCACTCTGTTTCGGACCA+GGG 0.608979 7_1:-72600076 None:intergenic
TAATTAGGACAAAACATGAA+GGG 0.611703 7_1:+72602489 Msa1036240:exon
ATACCGTTGATATTGAAGAA+GGG 0.621808 7_1:-72599476 None:intergenic
ATATGATCAGTTCGAACCCG+TGG 0.623871 7_1:-72600383 None:intergenic
GACCAAATACTATGTAATGT+CGG 0.627409 7_1:-72602220 None:intergenic
TTGTTTCTATTTCTAACCTG+CGG 0.633997 7_1:-72600410 None:intergenic
ATGTAGTGTTGGACATCGAA+CGG 0.635843 7_1:+72602365 Msa1036240:CDS
GAACCGATACTGGACTCGGT+TGG 0.636661 7_1:-72600861 None:intergenic
GGTGCAGAGGTTTAATAACA+AGG 0.639427 7_1:+72600762 Msa1036240:intron
AATTTCGGAGGGTCCGAGAG+AGG 0.639555 7_1:+72602245 Msa1036240:CDS
CTCTTCACATACCGATACAG+AGG 0.646601 7_1:+72600622 Msa1036240:CDS
TGATCGCAGAAGAGTTACTC+CGG 0.650624 7_1:+72600484 Msa1036240:CDS
TCAAGAACCGATACTGGACT+CGG 0.653534 7_1:-72600865 None:intergenic
AGCATTGAAACTTTGTTACG+TGG 0.653876 7_1:-72602445 None:intergenic
TTCCCTGGTCCGAAACAGAG+TGG 0.654540 7_1:+72600074 Msa1036240:CDS
TATTTGGTCGGAATTTCGGA+GGG 0.656011 7_1:+72602234 Msa1036240:CDS
GAGAAAACAGAACCAGTCAG+AGG 0.656398 7_1:+72600008 Msa1036240:CDS
TGTTGACTGTTGAGAAACAG+AGG 0.663889 7_1:+72599238 Msa1036240:five_prime_UTR
CATGAGTTTAGCAACGACGC+TGG 0.668277 7_1:-72599805 None:intergenic
GGAAATTGGAGATGTAGTGT+TGG 0.668713 7_1:+72602354 Msa1036240:CDS
AATCCAGGCATGTTTAACGA+TGG 0.681791 7_1:+72602698 Msa1036240:three_prime_UTR
AATCACCGAACCAGTCGCCG+AGG 0.683783 7_1:+72600537 Msa1036240:CDS
GTAAACGCCATTTGCCACCG+TGG 0.686666 7_1:+72602182 Msa1036240:CDS
GACCGGAAAGTGGAAACCGG+TGG 0.691246 7_1:-72600356 None:intergenic
ACCGCAACCAGAAAAGACAC+CGG 0.700889 7_1:+72599623 Msa1036240:CDS
CTGAGTCAGAAGATGATGCG+TGG 0.721626 7_1:+72601945 Msa1036240:CDS
GCAGAGGTTTAATAACAAGG+TGG 0.733490 7_1:+72600765 Msa1036240:intron
TGAATGGAGTGAATGTCACG+TGG 0.747520 7_1:+72602333 Msa1036240:CDS
GCGTTCTCCACATTCCACGG+TGG 0.758867 7_1:-72602196 None:intergenic
TGATGATTCATCTTCCACCG+AGG 0.765631 7_1:-72600594 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTTATTTGTTTACTA+CGG + chr7_1:72600741-72600760 Msa1036240:intron 10.0%
!! AAAAAACTATTCTTAAAAAT+TGG - chr7_1:72601665-72601684 None:intergenic 10.0%
!! ATGATTATTACAATAATATA+GGG - chr7_1:72601779-72601798 None:intergenic 10.0%
!! ATATAATTTGGTAAGATTTA+TGG + chr7_1:72599145-72599164 Msa1036240:five_prime_UTR 15.0%
!! TCTCATTAATTAATTTACTA+AGG - chr7_1:72600719-72600738 None:intergenic 15.0%
!!! GTTTTTTGATTTTTGTAAAT+TGG + chr7_1:72601678-72601697 Msa1036240:intron 15.0%
!! ATAATATAGGGATTAATTAT+TGG - chr7_1:72601767-72601786 None:intergenic 15.0%
!! CATGATTATTACAATAATAT+AGG - chr7_1:72601780-72601799 None:intergenic 15.0%
!! CTATATTATTGTAATAATCA+TGG + chr7_1:72601778-72601797 Msa1036240:intron 15.0%
!! ATATAATAACACATGAAAAA+AGG + chr7_1:72602547-72602566 Msa1036240:three_prime_UTR 15.0%
!! TATAATAACACATGAAAAAA+GGG + chr7_1:72602548-72602567 Msa1036240:three_prime_UTR 15.0%
!!! ATGTATGTTTTTTTAATTAG+TGG + chr7_1:72602654-72602673 Msa1036240:three_prime_UTR 15.0%
!! TAAAGGGCAAAAATATAATT+TGG + chr7_1:72599133-72599152 Msa1036240:five_prime_UTR 20.0%
!!! TAACCATTTCATAATTTTAC+AGG + chr7_1:72599548-72599567 Msa1036240:intron 20.0%
!!! AATTTTTACTTACTTCACTT+TGG + chr7_1:72601202-72601221 Msa1036240:intron 20.0%
!!! ATTTTTACTTACTTCACTTT+GGG + chr7_1:72601203-72601222 Msa1036240:intron 20.0%
!! AACTATTCTTAAAAATTGGT+TGG - chr7_1:72601661-72601680 None:intergenic 20.0%
!!! GTAAATTTTATAAGCTAATG+TGG + chr7_1:72601823-72601842 Msa1036240:intron 20.0%
!! AACAAAATAAAGTTCATTAG+AGG - chr7_1:72601883-72601902 None:intergenic 20.0%
!! TTCTTAATCTTAATGAACTT+TGG + chr7_1:72601902-72601921 Msa1036240:intron 20.0%
!!! GAAGTTAGAGTTTTATAATT+AGG + chr7_1:72602474-72602493 Msa1036240:CDS 20.0%
!!! TTTTTTTAATTAGTGGAATC+AGG + chr7_1:72602661-72602680 Msa1036240:three_prime_UTR 20.0%
! AAACAAATCCAGAAACAAAT+AGG + chr7_1:72599384-72599403 Msa1036240:CDS 25.0%
! AACAAATCCAGAAACAAATA+GGG + chr7_1:72599385-72599404 Msa1036240:CDS 25.0%
! TTAGTTATATGAGAGTGAAA+CGG - chr7_1:72599531-72599550 None:intergenic 25.0%
! GTTCCTGTAAAATTATGAAA+TGG - chr7_1:72599554-72599573 None:intergenic 25.0%
!!! AAACGAAGCATTGAATATAA+AGG + chr7_1:72600937-72600956 Msa1036240:CDS 25.0%
! ATGTCATTGATAGATAAGTT+TGG + chr7_1:72601076-72601095 Msa1036240:intron 25.0%
! TGTCATTGATAGATAAGTTT+GGG + chr7_1:72601077-72601096 Msa1036240:intron 25.0%
! TTGTTAATGTTACCAAAGAT+AGG - chr7_1:72601146-72601165 None:intergenic 25.0%
!! TGGAGGTAATAATATTTTCA+CGG - chr7_1:72601463-72601482 None:intergenic 25.0%
!! CTTTGGAAGTGTAATTAAAA+AGG + chr7_1:72601487-72601506 Msa1036240:intron 25.0%
!!! TTTTCATAAGTCAGTTTTGT+AGG + chr7_1:72601623-72601642 Msa1036240:intron 25.0%
!!! TTTCATAAGTCAGTTTTGTA+GGG + chr7_1:72601624-72601643 Msa1036240:intron 25.0%
! AATAAAGTTCATTAGAGGTT+AGG - chr7_1:72601878-72601897 None:intergenic 25.0%
!! ACATGTTTGAAGTTATATGT+GGG + chr7_1:72602281-72602300 Msa1036240:CDS 25.0%
! ATAATTAGGACAAAACATGA+AGG + chr7_1:72602488-72602507 Msa1036240:exon 25.0%
! TAATTAGGACAAAACATGAA+GGG + chr7_1:72602489-72602508 Msa1036240:exon 25.0%
!!! GCAACTTTTGCTTTTTTAAT+AGG + chr7_1:72602720-72602739 Msa1036240:three_prime_UTR 25.0%
!! AAAATGTTCGGTAACTTGTT+TGG + chr7_1:72599091-72599110 Msa1036240:five_prime_UTR 30.0%
!! AAATGTTCGGTAACTTGTTT+GGG + chr7_1:72599092-72599111 Msa1036240:five_prime_UTR 30.0%
AAAGAAAATGACAAGAGAGA+TGG + chr7_1:72599338-72599357 Msa1036240:exon 30.0%
ATACCGTTGATATTGAAGAA+GGG - chr7_1:72599479-72599498 None:intergenic 30.0%
!! TTGTTTCTATTTCTAACCTG+CGG - chr7_1:72600413-72600432 None:intergenic 30.0%
!! CATTTGCTTTAGTTAGCTTT+GGG + chr7_1:72601015-72601034 Msa1036240:intron 30.0%
AAACTGTTCTTTCCTATCTT+TGG + chr7_1:72601131-72601150 Msa1036240:intron 30.0%
!!! TTTTGTTTTGTTTTGTTGCC+TGG + chr7_1:72601169-72601188 Msa1036240:intron 30.0%
!!! TTTGTTTTGTTTTGTTGCCT+GGG + chr7_1:72601170-72601189 Msa1036240:intron 30.0%
TAAAAATTCACCATTTACCC+AGG - chr7_1:72601190-72601209 None:intergenic 30.0%
TTTCACACTAGTAGTAATAG+TGG + chr7_1:72601254-72601273 Msa1036240:intron 30.0%
! GAGGTAATAATATTTTCACG+GGG - chr7_1:72601461-72601480 None:intergenic 30.0%
! GGAGGTAATAATATTTTCAC+GGG - chr7_1:72601462-72601481 None:intergenic 30.0%
GTGTAATTAAAAAGGAGTGA+AGG + chr7_1:72601495-72601514 Msa1036240:intron 30.0%
!!! TGAAGGAGCATTTTTTAAGT+CGG + chr7_1:72601512-72601531 Msa1036240:intron 30.0%
!!! ATTTTTTAAGTCGGTGGATT+TGG + chr7_1:72601521-72601540 Msa1036240:intron 30.0%
! ATGCTTGAAATTAGAAGCAT+CGG + chr7_1:72601560-72601579 Msa1036240:intron 30.0%
CTGACCATATGTTTATATGT+GGG + chr7_1:72601595-72601614 Msa1036240:intron 30.0%
TGACCATATGTTTATATGTG+GGG + chr7_1:72601596-72601615 Msa1036240:intron 30.0%
TATCCCCACATATAAACATA+TGG - chr7_1:72601602-72601621 None:intergenic 30.0%
AAATTGGTACTGTATAGTGT+CGG + chr7_1:72601694-72601713 Msa1036240:intron 30.0%
GACCAAATACTATGTAATGT+CGG - chr7_1:72602223-72602242 None:intergenic 30.0%
GACATTACATAGTATTTGGT+CGG + chr7_1:72602222-72602241 Msa1036240:CDS 30.0%
ATAGTATTTGGTCGGAATTT+CGG + chr7_1:72602230-72602249 Msa1036240:CDS 30.0%
! GACATGTTTGAAGTTATATG+TGG + chr7_1:72602280-72602299 Msa1036240:CDS 30.0%
! AAGTTATATGTGGGATTTTG+AGG + chr7_1:72602290-72602309 Msa1036240:CDS 30.0%
AAAACATGAAGGGAAAAAGA+GGG + chr7_1:72602499-72602518 Msa1036240:three_prime_UTR 30.0%
AATAACACATGAAAAAAGGG+AGG + chr7_1:72602551-72602570 Msa1036240:three_prime_UTR 30.0%
ATAACACATGAAAAAAGGGA+GGG + chr7_1:72602552-72602571 Msa1036240:three_prime_UTR 30.0%
CTATGGGACTATTAAAGATA+AGG - chr7_1:72602608-72602627 None:intergenic 30.0%
GAAAGTAGTGAGTAAACTAT+GGG - chr7_1:72602624-72602643 None:intergenic 30.0%
AGAAAGTAGTGAGTAAACTA+TGG - chr7_1:72602625-72602644 None:intergenic 30.0%
!!! GAGTTTTAAACCTAAAATCC+AGG + chr7_1:72602683-72602702 Msa1036240:three_prime_UTR 30.0%
!!! CGTTTTAAAGACGAGAAAAG+CGG + chr7_1:72599173-72599192 Msa1036240:five_prime_UTR 35.0%
!!! GTTTTAAAGACGAGAAAAGC+GGG + chr7_1:72599174-72599193 Msa1036240:five_prime_UTR 35.0%
! TGAAGAAGGGAGTCTTTTAA+CGG - chr7_1:72599466-72599485 None:intergenic 35.0%
ACTCCCTTCTTCAATATCAA+CGG + chr7_1:72599473-72599492 Msa1036240:CDS 35.0%
GATACCGTTGATATTGAAGA+AGG - chr7_1:72599480-72599499 None:intergenic 35.0%
TTACAGGAACCTGAAACAAA+CGG + chr7_1:72599564-72599583 Msa1036240:intron 35.0%
AAGAAGGAACAAAATCTCCA+TGG + chr7_1:72599667-72599686 Msa1036240:CDS 35.0%
AGAGCTATTGTAGATGCAAA+AGG + chr7_1:72599729-72599748 Msa1036240:CDS 35.0%
AATGACAATCCATCCTAAAG+AGG + chr7_1:72599755-72599774 Msa1036240:CDS 35.0%
!! GTTTTTCTTCCTCTTTAGGA+TGG - chr7_1:72599767-72599786 None:intergenic 35.0%
ATCTTAGAAGCTTACGGTTT+GGG - chr7_1:72599860-72599879 None:intergenic 35.0%
AAGCAGATCTTAGAAGCTTA+CGG - chr7_1:72599866-72599885 None:intergenic 35.0%
CTTTGTCGAATTGCTTTAAC+TGG - chr7_1:72599953-72599972 None:intergenic 35.0%
!! TGTTTTATTACTCCTCTGAC+TGG - chr7_1:72600023-72600042 None:intergenic 35.0%
TTCAAGGTGAGATTGAGAAA+CGG + chr7_1:72600108-72600127 Msa1036240:CDS 35.0%
AGTGTGTCAAGATCTTTAGA+AGG - chr7_1:72600158-72600177 None:intergenic 35.0%
TGATTCTCAATCTCCTATTG+TGG + chr7_1:72600277-72600296 Msa1036240:CDS 35.0%
GTTCGATTAATTGATCTTCC+TGG - chr7_1:72600311-72600330 None:intergenic 35.0%
GGAAGATCAATTAATCGAAC+CGG + chr7_1:72600311-72600330 Msa1036240:CDS 35.0%
TACTGTACAAACCTCTGTAT+CGG - chr7_1:72600636-72600655 None:intergenic 35.0%
TCAATGCTTCGTTTCATTAC+TGG - chr7_1:72600931-72600950 None:intergenic 35.0%
! GCATTTGCTTTAGTTAGCTT+TGG + chr7_1:72601014-72601033 Msa1036240:intron 35.0%
TAGTCAGAGTGAGTTAATAC+TGG + chr7_1:72601048-72601067 Msa1036240:intron 35.0%
TTTACTTACTTCACTTTGGG+AGG + chr7_1:72601206-72601225 Msa1036240:intron 35.0%
GTATCTTATTCTATCCTACG+TGG + chr7_1:72601302-72601321 Msa1036240:intron 35.0%
TGGACCAATGATTTGATACT+AGG + chr7_1:72601322-72601341 Msa1036240:intron 35.0%
GGACCAATGATTTGATACTA+GGG + chr7_1:72601323-72601342 Msa1036240:intron 35.0%
CTTCCCTAGTATCAAATCAT+TGG - chr7_1:72601329-72601348 None:intergenic 35.0%
ATGATTTGATACTAGGGAAG+TGG + chr7_1:72601329-72601348 Msa1036240:intron 35.0%
ACACCACTATCGAAATAGAA+AGG - chr7_1:72601425-72601444 None:intergenic 35.0%
ATTATTACCTCCACACACTT+TGG + chr7_1:72601470-72601489 Msa1036240:intron 35.0%
AATTACACTTCCAAAGTGTG+TGG - chr7_1:72601483-72601502 None:intergenic 35.0%
CCACATATAAACATATGGTC+AGG - chr7_1:72601597-72601616 None:intergenic 35.0%
CCTGACCATATGTTTATATG+TGG + chr7_1:72601594-72601613 Msa1036240:intron 35.0%
!! CAGTTTTGTAGGGTTATGTA+AGG + chr7_1:72601634-72601653 Msa1036240:intron 35.0%
TTTGGTAAAACTGCAGATCT+AGG + chr7_1:72601920-72601939 Msa1036240:intron 35.0%
! TCTTTGAAGAGTGGAAACTT+TGG - chr7_1:72602125-72602144 None:intergenic 35.0%
AAGTTTCCACTCTTCAAAGA+CGG + chr7_1:72602125-72602144 Msa1036240:CDS 35.0%
! AATTAACCGTCTTTGAAGAG+TGG - chr7_1:72602134-72602153 None:intergenic 35.0%
!! TATATGTGGGATTTTGAGGA+AGG + chr7_1:72602294-72602313 Msa1036240:CDS 35.0%
!! ATTTTGAGGAAGGACATGAA+TGG + chr7_1:72602304-72602323 Msa1036240:CDS 35.0%
ACATGAATGGAGAGAATGAA+TGG + chr7_1:72602317-72602336 Msa1036240:CDS 35.0%
ACACGATGCTAAATCTCTAA+TGG - chr7_1:72602419-72602438 None:intergenic 35.0%
TAGAGATTTAGCATCGTGTA+AGG + chr7_1:72602420-72602439 Msa1036240:CDS 35.0%
! AGCATTGAAACTTTGTTACG+TGG - chr7_1:72602448-72602467 None:intergenic 35.0%
ACAAAGTTTCAATGCTTCGT+AGG + chr7_1:72602452-72602471 Msa1036240:CDS 35.0%
CAAAACATGAAGGGAAAAAG+AGG + chr7_1:72602498-72602517 Msa1036240:three_prime_UTR 35.0%
AAACATGAAGGGAAAAAGAG+GGG + chr7_1:72602500-72602519 Msa1036240:three_prime_UTR 35.0%
TAACACATGAAAAAAGGGAG+GGG + chr7_1:72602553-72602572 Msa1036240:three_prime_UTR 35.0%
! GTTAAACATGCCTGGATTTT+AGG - chr7_1:72602696-72602715 None:intergenic 35.0%
! AAGCGGGAGTGTAGAATAAA+AGG + chr7_1:72599190-72599209 Msa1036240:five_prime_UTR 40.0%
ACAGTCAACACTGTAGTATG+TGG - chr7_1:72599228-72599247 None:intergenic 40.0%
! TGTTGACTGTTGAGAAACAG+AGG + chr7_1:72599238-72599257 Msa1036240:five_prime_UTR 40.0%
!! CCTTCTTTGAAGTCGAAAAC+CGG - chr7_1:72599654-72599673 None:intergenic 40.0%
!!! CGTCGTTTTTCTTCCTCTTT+AGG - chr7_1:72599771-72599790 None:intergenic 40.0%
GATCTTAGAAGCTTACGGTT+TGG - chr7_1:72599861-72599880 None:intergenic 40.0%
!!! GATTCTGCTGATTTTTTCCC+TGG + chr7_1:72600059-72600078 Msa1036240:CDS 40.0%
GAAACAGTACCACTCTGTTT+CGG - chr7_1:72600086-72600105 None:intergenic 40.0%
AGTGGTACTGTTTCAGTTCA+AGG + chr7_1:72600092-72600111 Msa1036240:CDS 40.0%
GATCAATTAATCGAACCGGT+TGG + chr7_1:72600315-72600334 Msa1036240:CDS 40.0%
ATTAATCGAACCGGTTGGAT+CGG + chr7_1:72600320-72600339 Msa1036240:CDS 40.0%
AGAATCATTTCCGATCCAAC+CGG - chr7_1:72600333-72600352 None:intergenic 40.0%
AACTGATCATATTCAACCGC+AGG + chr7_1:72600394-72600413 Msa1036240:CDS 40.0%
GTAATCTTTCTCACGCGATT+GGG - chr7_1:72600458-72600477 None:intergenic 40.0%
AACTCTTCTGCGATCAACAT+TGG - chr7_1:72600480-72600499 None:intergenic 40.0%
! TGCCACTTACCAAAAAGAGA+AGG + chr7_1:72600571-72600590 Msa1036240:CDS 40.0%
TTACCAAAAAGAGAAGGCCT+CGG + chr7_1:72600577-72600596 Msa1036240:CDS 40.0%
ATTTGTTTACTACGGTGCAG+AGG + chr7_1:72600749-72600768 Msa1036240:intron 40.0%
GGTGCAGAGGTTTAATAACA+AGG + chr7_1:72600762-72600781 Msa1036240:intron 40.0%
GCAGAGGTTTAATAACAAGG+TGG + chr7_1:72600765-72600784 Msa1036240:intron 40.0%
GAGGTTTAATAACAAGGTGG+AGG + chr7_1:72600768-72600787 Msa1036240:intron 40.0%
AAGGGAAAGAACTGTTGAAG+AGG + chr7_1:72600803-72600822 Msa1036240:CDS 40.0%
GACACATATGTCGTAATCGT+TGG + chr7_1:72600984-72601003 Msa1036240:intron 40.0%
! TGTCGTAATCGTTGGTTACT+TGG + chr7_1:72600992-72601011 Msa1036240:intron 40.0%
!! CTTTAGTTAGCTTTGGGTTG+TGG + chr7_1:72601021-72601040 Msa1036240:intron 40.0%
TCAGAGTGAGTTAATACTGG+CGG + chr7_1:72601051-72601070 Msa1036240:intron 40.0%
!! TGTTTTGTTGCCTGGGTAAA+TGG + chr7_1:72601177-72601196 Msa1036240:intron 40.0%
! CACTAGTAGTAATAGTGGAG+TGG + chr7_1:72601259-72601278 Msa1036240:intron 40.0%
ATCAAATCATTGGTCCACGT+AGG - chr7_1:72601319-72601338 None:intergenic 40.0%
AGTATACTTGTACGATCACG+TGG + chr7_1:72601381-72601400 Msa1036240:intron 40.0%
GTATACTTGTACGATCACGT+GGG + chr7_1:72601382-72601401 Msa1036240:intron 40.0%
CTGCCTTTCTATTTCGATAG+TGG + chr7_1:72601419-72601438 Msa1036240:intron 40.0%
!!! AGGAGCATTTTTTAAGTCGG+TGG + chr7_1:72601515-72601534 Msa1036240:intron 40.0%
AGGAACATGTCATTGTCTTC+GGG - chr7_1:72602061-72602080 None:intergenic 40.0%
GAGGAACATGTCATTGTCTT+CGG - chr7_1:72602062-72602081 None:intergenic 40.0%
! ACTGTTGCTGTTCTAGTAAG+AGG - chr7_1:72602081-72602100 None:intergenic 40.0%
CGCCGACATTACATAGTATT+TGG + chr7_1:72602218-72602237 Msa1036240:CDS 40.0%
TATTTGGTCGGAATTTCGGA+GGG + chr7_1:72602234-72602253 Msa1036240:CDS 40.0%
AGTGAATGTCACGTGGAAAT+TGG + chr7_1:72602340-72602359 Msa1036240:CDS 40.0%
GGAAATTGGAGATGTAGTGT+TGG + chr7_1:72602354-72602373 Msa1036240:CDS 40.0%
! ATGTAGTGTTGGACATCGAA+CGG + chr7_1:72602365-72602384 Msa1036240:CDS 40.0%
AGGGAAAAAGAGGGGAAAAA+AGG + chr7_1:72602508-72602527 Msa1036240:three_prime_UTR 40.0%
!! GGAGGGGTTTTCTTTTGTTT+TGG + chr7_1:72602569-72602588 Msa1036240:three_prime_UTR 40.0%
AATCCAGGCATGTTTAACGA+TGG + chr7_1:72602698-72602717 Msa1036240:three_prime_UTR 40.0%
CCATGCACCCTATTTGTTTC+TGG - chr7_1:72599395-72599414 None:intergenic 45.0%
CCAGAAACAAATAGGGTGCA+TGG + chr7_1:72599392-72599411 Msa1036240:CDS 45.0%
AAACAAATAGGGTGCATGGC+AGG + chr7_1:72599396-72599415 Msa1036240:CDS 45.0%
GGTGAGTTACCGTTTGTTTC+AGG - chr7_1:72599576-72599595 None:intergenic 45.0%
!! GTTTCTGGTGTTGATTCAGC+TGG - chr7_1:72599597-72599616 None:intergenic 45.0%
!! AGAAAAGACACCGGTTCTTC+CGG + chr7_1:72599632-72599651 Msa1036240:CDS 45.0%
AAGTCGAAAACCGGAAGAAC+CGG - chr7_1:72599645-72599664 None:intergenic 45.0%
! CCGGTTTTCGACTTCAAAGA+AGG + chr7_1:72599651-72599670 Msa1036240:CDS 45.0%
GCTTCTCTGGTGAATTTCCA+TGG - chr7_1:72599687-72599706 None:intergenic 45.0%
AGAAGCTCCAAGACTATCGT+TGG + chr7_1:72599701-72599720 Msa1036240:CDS 45.0%
CTGCTATCCAACGATAGTCT+TGG - chr7_1:72599711-72599730 None:intergenic 45.0%
AGCGTCGTTGCTAAACTCAT+GGG + chr7_1:72599807-72599826 Msa1036240:CDS 45.0%
! GTTTGGGTTAGGGTTTGGAT+CGG - chr7_1:72599844-72599863 None:intergenic 45.0%
! TTACGGTTTGGGTTAGGGTT+TGG - chr7_1:72599849-72599868 None:intergenic 45.0%
! GAAGCTTACGGTTTGGGTTA+GGG - chr7_1:72599854-72599873 None:intergenic 45.0%
! AGAAGCTTACGGTTTGGGTT+AGG - chr7_1:72599855-72599874 None:intergenic 45.0%
GAGAAAACAGAACCAGTCAG+AGG + chr7_1:72600008-72600027 Msa1036240:CDS 45.0%
AGAAACGGTTGAAGATGCGT+GGG + chr7_1:72600123-72600142 Msa1036240:CDS 45.0%
CTTTCAACTGCAACGCTTCA+AGG - chr7_1:72600190-72600209 None:intergenic 45.0%
!! CTTGAAGCGTTGCAGTTGAA+AGG + chr7_1:72600188-72600207 Msa1036240:CDS 45.0%
CCTGGCTTCATAACCACAAT+AGG - chr7_1:72600293-72600312 None:intergenic 45.0%
CCTATTGTGGTTATGAAGCC+AGG + chr7_1:72600290-72600309 Msa1036240:CDS 45.0%
TTAGACCGGAAAGTGGAAAC+CGG - chr7_1:72600362-72600381 None:intergenic 45.0%
ATATGATCAGTTCGAACCCG+TGG - chr7_1:72600386-72600405 None:intergenic 45.0%
GGTAATCTTTCTCACGCGAT+TGG - chr7_1:72600459-72600478 None:intergenic 45.0%
TGATCGCAGAAGAGTTACTC+CGG + chr7_1:72600484-72600503 Msa1036240:CDS 45.0%
TTACTCCGGTTCATTCTTCG+AGG + chr7_1:72600498-72600517 Msa1036240:CDS 45.0%
TCACTCCTCGAAGAATGAAC+CGG - chr7_1:72600506-72600525 None:intergenic 45.0%
! GTGGCAACTTTTCTCATCCT+CGG - chr7_1:72600557-72600576 None:intergenic 45.0%
!! GGCCTTCTCTTTTTGGTAAG+TGG - chr7_1:72600576-72600595 None:intergenic 45.0%
TGATGATTCATCTTCCACCG+AGG - chr7_1:72600597-72600616 None:intergenic 45.0%
! CTCTGTATCGGTATGTGAAG+AGG - chr7_1:72600624-72600643 None:intergenic 45.0%
CTCTTCACATACCGATACAG+AGG + chr7_1:72600622-72600641 Msa1036240:CDS 45.0%
TGGAGGAGCAATACAGAGAA+GGG + chr7_1:72600785-72600804 Msa1036240:CDS 45.0%
TCAAGAACCGATACTGGACT+CGG - chr7_1:72600868-72600887 None:intergenic 45.0%
GATGAGTCAAGAACCGATAC+TGG - chr7_1:72600874-72600893 None:intergenic 45.0%
! TAGTAATAGTGGAGTGGCAG+TGG + chr7_1:72601265-72601284 Msa1036240:intron 45.0%
TGATACTAGGGAAGTGGAGT+TGG + chr7_1:72601335-72601354 Msa1036240:intron 45.0%
TACACTTCCAAAGTGTGTGG+AGG - chr7_1:72601480-72601499 None:intergenic 45.0%
GAACAGCAACAGTACCTCAA+AGG + chr7_1:72602088-72602107 Msa1036240:CDS 45.0%
!! TGGAAGTGTCGTTTCCTTTG+AGG - chr7_1:72602105-72602124 None:intergenic 45.0%
GTATTTGGTCGGAATTTCGG+AGG + chr7_1:72602233-72602252 Msa1036240:CDS 45.0%
TGAATGGAGTGAATGTCACG+TGG + chr7_1:72602333-72602352 Msa1036240:CDS 45.0%
TTGCCATCGTTAAACATGCC+TGG - chr7_1:72602704-72602723 None:intergenic 45.0%
!! TATAGAAAAAAAATAAATAA+AGG + chr7_1:72599116-72599135 Msa1036240:five_prime_UTR 5.0%
!! ATAGAAAAAAAATAAATAAA+GGG + chr7_1:72599117-72599136 Msa1036240:five_prime_UTR 5.0%
! AGTAGATGCGTTTTCCTGGG+TGG - chr7_1:72599443-72599462 None:intergenic 50.0%
! CGGAGTAGATGCGTTTTCCT+GGG - chr7_1:72599446-72599465 None:intergenic 50.0%
! ACGGAGTAGATGCGTTTTCC+TGG - chr7_1:72599447-72599466 None:intergenic 50.0%
!! GGTTGCGGTGTTGATGTTTC+TGG - chr7_1:72599612-72599631 None:intergenic 50.0%
ACCGCAACCAGAAAAGACAC+CGG + chr7_1:72599623-72599642 Msa1036240:CDS 50.0%
!!! ACCGGTGTCTTTTCTGGTTG+CGG - chr7_1:72599627-72599646 None:intergenic 50.0%
! GGAAGAACCGGTGTCTTTTC+TGG - chr7_1:72599633-72599652 None:intergenic 50.0%
! CGATAGTCTTGGAGCTTCTC+TGG - chr7_1:72599700-72599719 None:intergenic 50.0%
CATGAGTTTAGCAACGACGC+TGG - chr7_1:72599808-72599827 None:intergenic 50.0%
CAGCGTCGTTGCTAAACTCA+TGG + chr7_1:72599806-72599825 Msa1036240:CDS 50.0%
TACCACTCTGTTTCGGACCA+GGG - chr7_1:72600079-72600098 None:intergenic 50.0%
GAGAAACGGTTGAAGATGCG+TGG + chr7_1:72600122-72600141 Msa1036240:CDS 50.0%
CGGAAATGATTCTCCACCAC+CGG + chr7_1:72600340-72600359 Msa1036240:CDS 50.0%
CCACTTTCCGGTCTAAACCA+CGG + chr7_1:72600366-72600385 Msa1036240:CDS 50.0%
CACTTTCCGGTCTAAACCAC+GGG + chr7_1:72600367-72600386 Msa1036240:CDS 50.0%
TTCGAACCCGTGGTTTAGAC+CGG - chr7_1:72600376-72600395 None:intergenic 50.0%
GTGGAGGAGCAATACAGAGA+AGG + chr7_1:72600784-72600803 Msa1036240:CDS 50.0%
AGACCAACCGAGTCCAGTAT+CGG + chr7_1:72600858-72600877 Msa1036240:CDS 50.0%
TTGGGCTACGCGTGTTTACT+AGG + chr7_1:72601095-72601114 Msa1036240:intron 50.0%
! ACTAGGGAAGTGGAGTTGGT+TGG + chr7_1:72601339-72601358 Msa1036240:intron 50.0%
CTGAGTCAGAAGATGATGCG+TGG + chr7_1:72601945-72601964 Msa1036240:CDS 50.0%
ACGGTGGCAAATGGCGTTTA+CGG - chr7_1:72602183-72602202 None:intergenic 50.0%
CCTCTAACTCTTCCCTCTCT+CGG - chr7_1:72602261-72602280 None:intergenic 50.0%
GAGTTTAGCAACGACGCTGG+TGG - chr7_1:72599805-72599824 None:intergenic 55.0%
TTCCCTGGTCCGAAACAGAG+TGG + chr7_1:72600074-72600093 Msa1036240:CDS 55.0%
GTACCACTCTGTTTCGGACC+AGG - chr7_1:72600080-72600099 None:intergenic 55.0%
!! CACCACCGGTTTCCACTTTC+CGG + chr7_1:72600354-72600373 Msa1036240:CDS 55.0%
CCGTGGTTTAGACCGGAAAG+TGG - chr7_1:72600369-72600388 None:intergenic 55.0%
CTTCGAGGAGTGAACCGAAC+CGG + chr7_1:72600513-72600532 Msa1036240:CDS 55.0%
!! TGGTTCGGTGATTGCCGGTT+CGG - chr7_1:72600530-72600549 None:intergenic 55.0%
! CTTTTCTCATCCTCGGCGAC+TGG - chr7_1:72600550-72600569 None:intergenic 55.0%
! CCACCGAGGCCTTCTCTTTT+TGG - chr7_1:72600583-72600602 None:intergenic 55.0%
CCAAAAAGAGAAGGCCTCGG+TGG + chr7_1:72600580-72600599 Msa1036240:CDS 55.0%
! GAACCGATACTGGACTCGGT+TGG - chr7_1:72600864-72600883 None:intergenic 55.0%
GTACGATCACGTGGGAGTGA+TGG + chr7_1:72601390-72601409 Msa1036240:intron 55.0%
GTAAACGCCATTTGCCACCG+TGG + chr7_1:72602182-72602201 Msa1036240:CDS 55.0%
CCACATTCCACGGTGGCAAA+TGG - chr7_1:72602192-72602211 None:intergenic 55.0%
CCATTTGCCACCGTGGAATG+TGG + chr7_1:72602189-72602208 Msa1036240:CDS 55.0%
AATTTCGGAGGGTCCGAGAG+AGG + chr7_1:72602245-72602264 Msa1036240:CDS 55.0%
ATTTCGGAGGGTCCGAGAGA+GGG + chr7_1:72602246-72602265 Msa1036240:CDS 55.0%
CCGAGAGAGGGAAGAGTTAG+AGG + chr7_1:72602258-72602277 Msa1036240:CDS 55.0%
CACATCTTCGATCGCCACCC+AGG + chr7_1:72599426-72599445 Msa1036240:CDS 60.0%
CGGAAAGTGGAAACCGGTGG+TGG - chr7_1:72600356-72600375 None:intergenic 60.0%
GACCGGAAAGTGGAAACCGG+TGG - chr7_1:72600359-72600378 None:intergenic 60.0%
!! GCGACTGGTTCGGTGATTGC+CGG - chr7_1:72600535-72600554 None:intergenic 60.0%
AATCACCGAACCAGTCGCCG+AGG + chr7_1:72600537-72600556 Msa1036240:CDS 60.0%
! CTCATCCTCGGCGACTGGTT+CGG - chr7_1:72600545-72600564 None:intergenic 60.0%
GCGTTCTCCACATTCCACGG+TGG - chr7_1:72602199-72602218 None:intergenic 60.0%
GGCGCGTTCTCCACATTCCA+CGG - chr7_1:72602202-72602221 None:intergenic 60.0%
ACGCGATTGGGACTGCGCGT+GGG - chr7_1:72600446-72600465 None:intergenic 65.0%
CACGCGATTGGGACTGCGCG+TGG - chr7_1:72600447-72600466 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72599091 72602743 72599091 ID=Msa1036240;Name=Msa1036240
chr7_1 mRNA 72599091 72602743 72599091 ID=Msa1036240-mRNA-1;Parent=Msa1036240;Name=Msa1036240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=254|1|1|1|1|1|4|248|657
chr7_1 exon 72599091 72599494 72599091 ID=Msa1036240-mRNA-1:exon:17687;Parent=Msa1036240-mRNA-1
chr7_1 exon 72599570 72600643 72599570 ID=Msa1036240-mRNA-1:exon:17688;Parent=Msa1036240-mRNA-1
chr7_1 exon 72600769 72600958 72600769 ID=Msa1036240-mRNA-1:exon:17689;Parent=Msa1036240-mRNA-1
chr7_1 exon 72601936 72602743 72601936 ID=Msa1036240-mRNA-1:exon:17690;Parent=Msa1036240-mRNA-1
chr7_1 five_prime_UTR 72599091 72599344 72599091 ID=Msa1036240-mRNA-1:five_prime_utr;Parent=Msa1036240-mRNA-1
chr7_1 CDS 72599345 72599494 72599345 ID=Msa1036240-mRNA-1:cds;Parent=Msa1036240-mRNA-1
chr7_1 CDS 72599570 72600643 72599570 ID=Msa1036240-mRNA-1:cds;Parent=Msa1036240-mRNA-1
chr7_1 CDS 72600769 72600958 72600769 ID=Msa1036240-mRNA-1:cds;Parent=Msa1036240-mRNA-1
chr7_1 CDS 72601936 72602495 72601936 ID=Msa1036240-mRNA-1:cds;Parent=Msa1036240-mRNA-1
chr7_1 three_prime_UTR 72602496 72602743 72602496 ID=Msa1036240-mRNA-1:three_prime_utr;Parent=Msa1036240-mRNA-1
Gene Sequence

>Msa1036240

ATGACAAGAGAGATGGAAGTAAAAGATCAAAAGCTTGAGAAACAAATCCAGAAACAAATAGGGTGCATGGCAGGTTTCTTTCACATCTTCGATCGCCACCCAGGAAAACGCATCTACTCCGTTAAAAGACTCCCTTCTTCAATATCAACGGAACCTGAAACAAACGGTAACTCACCAGCTGAATCAACACCAGAAACATCAACACCGCAACCAGAAAAGACACCGGTTCTTCCGGTTTTCGACTTCAAAGAAGGAACAAAATCTCCATGGAAATTCACCAGAGAAGCTCCAAGACTATCGTTGGATAGCAGAGCTATTGTAGATGCAAAAGGAACAATGACAATCCATCCTAAAGAGGAAGAAAAACGACGACGTTCAACTTCCACCAGCGTCGTTGCTAAACTCATGGGTCTAGAAGACTCCGATCCAAACCCTAACCCAAACCGTAAGCTTCTAAGATCTGCTTCTGAATCAACTGTTCATAGAGATCTATCATCTCAACAGTATCGTTTCTTTGACACTACAAATTTCCAGTTAAAGCAATTCGACAAAGTTTCATCTTTAAACGACAGTGTTATAGATCTAAACGAGAAAACAGAACCAGTCAGAGGAGTAATAAAACAAAAGAAATGTTTCTATGATTCTGCTGATTTTTTCCCTGGTCCGAAACAGAGTGGTACTGTTTCAGTTCAAGGTGAGATTGAGAAACGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTTGACACACTGAAACAAATCCTTGAAGCGTTGCAGTTGAAAGGACTATTACATTCTAAGAAATCAATGAATGTAACAAATCAAAGAAACTTTGTTATTGAGAATGTGAATGATTCTCAATCTCCTATTGTGGTTATGAAGCCAGGAAGATCAATTAATCGAACCGGTTGGATCGGAAATGATTCTCCACCACCGGTTTCCACTTTCCGGTCTAAACCACGGGTTCGAACTGATCATATTCAACCGCAGGTTAGAAATAGAAACAACGTAAACTCACCCACGCGCAGTCCCAATCGCGTGAGAAAGATTACCAATGTTGATCGCAGAAGAGTTACTCCGGTTCATTCTTCGAGGAGTGAACCGAACCGGCAATCACCGAACCAGTCGCCGAGGATGAGAAAAGTTGCCACTTACCAAAAAGAGAAGGCCTCGGTGGAAGATGAATCATCAAGTACCTCTTCACATACCGATACAGAGAGGTTTAATAACAAGGTGGAGGAGCAATACAGAGAAGGGAAAGAACTGTTGAAGAGGTGTGATAAATTACTAAACAGTATAGCTGAGTTAGACCAACCGAGTCCAGTATCGGTTCTTGACTCATCGTTTTACAAAGACGACTCGTCGTGTACAGCGTCTCCAGTAATGAAACGAAGCATTGAATATAAAGATCTAGGAGCTGAGTCAGAAGATGATGCGTGGTGTGCAGCTTTGTGTTACAGTGAAGCAAAGTCAGAAGAAGATAACGATTTTGTATATGTTTCAGAAGTACTTCGTGCTTCTAATTATTTACCCGAAGACAATGACATGTTCCTCTTACTAGAACAGCAACAGTACCTCAAAGGAAACGACACTTCCAAAGTTTCCACTCTTCAAAGACGGTTAATTTTCGACACAATTCATGAAATCATCAACCGTAAACGCCATTTGCCACCGTGGAATGTGGAGAACGCGCCGACATTACATAGTATTTGGTCGGAATTTCGGAGGGTCCGAGAGAGGGAAGAGTTAGAGGACATGTTTGAAGTTATATGTGGGATTTTGAGGAAGGACATGAATGGAGAGAATGAATGGAGTGAATGTCACGTGGAAATTGGAGATGTAGTGTTGGACATCGAACGGTTCATATTCAAAGATCTTATATGCGAAACCATTAGAGATTTAGCATCGTGTAAGGTACCACGTAACAAAGTTTCAATGCTTCGTAGGAAGTTAGAGTTTTATAATTAG
Protein sequence

>Msa1036240

MTREMEVKDQKLEKQIQKQIGCMAGFFHIFDRHPGKRIYSVKRLPSSISTEPETNGNSPAESTPETSTPQPEKTPVLPVFDFKEGTKSPWKFTREAPRLSLDSRAIVDAKGTMTIHPKEEEKRRRSTSTSVVAKLMGLEDSDPNPNPNRKLLRSASESTVHRDLSSQQYRFFDTTNFQLKQFDKVSSLNDSVIDLNEKTEPVRGVIKQKKCFYDSADFFPGPKQSGTVSVQGEIEKRLKMRGIHEPSKDLDTLKQILEALQLKGLLHSKKSMNVTNQRNFVIENVNDSQSPIVVMKPGRSINRTGWIGNDSPPPVSTFRSKPRVRTDHIQPQVRNRNNVNSPTRSPNRVRKITNVDRRRVTPVHSSRSEPNRQSPNQSPRMRKVATYQKEKASVEDESSSTSSHTDTERFNNKVEEQYREGKELLKRCDKLLNSIAELDQPSPVSVLDSSFYKDDSSCTASPVMKRSIEYKDLGAESEDDAWCAALCYSEAKSEEDNDFVYVSEVLRASNYLPEDNDMFLLLEQQQYLKGNDTSKVSTLQRRLIFDTIHEIINRKRHLPPWNVENAPTLHSIWSEFRRVREREELEDMFEVICGILRKDMNGENEWSECHVEIGDVVLDIERFIFKDLICETIRDLASCKVPRNKVSMLRRKLEFYN*