AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036940 MtrunA17_Chr7g0275381 94.374 942 40 7 1 935 1 936 0.0 1679
Msa1036940 MtrunA17_Chr2g0277001 93.418 942 48 6 1 935 1 935 0.0 1625
Msa1036940 MtrunA17_Chr1g0155771 92.675 942 55 6 1 935 1 935 0.0 1595
Msa1036940 MtrunA17_Chr6g0468211 57.565 575 136 10 263 833 62 532 0.0 566
Msa1036940 MtrunA17_Chr2g0316781 50.995 402 54 8 166 566 12 271 8.46e-108 334
Msa1036940 MtrunA17_Chr2g0303811 81.290 155 29 0 564 718 1 155 2.46e-85 270
Msa1036940 MtrunA17_Chr6g0468421 58.893 253 41 3 326 578 1 190 1.41e-84 270
Msa1036940 MtrunA17_Chr6g0468011 60.606 198 47 4 263 458 12 180 4.17e-65 217
Msa1036940 MtrunA17_Chr6g0468411 76.296 135 28 1 555 685 5 139 3.76e-64 213
Msa1036940 MtrunA17_Chr2g0303821 61.468 109 41 1 726 833 1 109 3.25e-37 137
Msa1036940 MtrunA17_Chr6g0467931 66.000 100 32 2 725 822 1 100 2.18e-31 118
Msa1036940 MtrunA17_Chr6g0467941 47.222 144 24 2 542 685 1 92 1.11e-30 116
Msa1036940 MtrunA17_Chr6g0468001 57.658 111 25 3 725 833 1 91 2.63e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036940 AT3G56150.2 66.064 940 274 14 1 935 1 900 0.0 1141
Msa1036940 AT3G56150.1 66.064 940 274 14 1 935 1 900 0.0 1141
Msa1036940 AT3G22860.1 63.993 611 206 6 247 847 181 787 0.0 791

Find 287 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATGTTTGTTCTGATTTA+TGG 0.039660 7_1:+73431307 Msa1036940:three_prime_UTR
GAATCATCAACCTTTATATT+TGG 0.096189 7_1:-73428361 None:intergenic
CAAGAAGTTCAAAGAGATTC+TGG 0.204715 7_1:+73428117 Msa1036940:CDS
GCACCGTAAGCCAGAGATTT+TGG 0.211560 7_1:+73431433 Msa1036940:three_prime_UTR
GATTTCAGATGAAATTTCTT+TGG 0.216565 7_1:+73431247 Msa1036940:three_prime_UTR
TTTGCTTGTTATGAGAATTT+AGG 0.218743 7_1:-73427207 None:intergenic
GAAATCCAGAATCTAGATTA+AGG 0.224705 7_1:-73431230 None:intergenic
CGCTCAGGCTTCTGCTAATA+AGG 0.232003 7_1:+73427721 Msa1036940:CDS
ACATGATCCCTGACAGTTTC+AGG 0.235192 7_1:-73430397 None:intergenic
TGTTTGTCTGAACTTTATTC+TGG 0.235265 7_1:+73429075 Msa1036940:CDS
CAATAATGTCAAAGGCCTTC+TGG 0.238181 7_1:-73430456 None:intergenic
TGTAGAGATTAGGGATCTTT+TGG 0.247786 7_1:-73427667 None:intergenic
ACTATTGGTTGTATTGTTCT+TGG 0.247951 7_1:-73427429 None:intergenic
GCCACAAGGGTTCTTATTAA+TGG 0.250263 7_1:+73430427 Msa1036940:CDS
TTGCTTGTTATGAGAATTTA+GGG 0.261309 7_1:-73427206 None:intergenic
AAACAATGGCTTCGAAATTC+TGG 0.265074 7_1:+73427233 Msa1036940:exon
GGTTTCCGTGCAACAAGCTC+TGG 0.287399 7_1:-73428775 None:intergenic
TATGCCCTTAATCTAGATTC+TGG 0.321581 7_1:+73431225 Msa1036940:three_prime_UTR
AATCATCAACCTTTATATTT+GGG 0.328028 7_1:-73428360 None:intergenic
AGAGAATAGCAGGACCTTAA+TGG 0.328364 7_1:+73428807 Msa1036940:CDS
TTATGAAGCAACGAGAAAAT+TGG 0.328433 7_1:+73428675 Msa1036940:CDS
TCCAGTTCCCTTCCTTCCCC+TGG 0.347878 7_1:-73428143 None:intergenic
CAGACTTAACAACACGCTTT+TGG 0.353125 7_1:-73427502 None:intergenic
GACGAGGACTCTGACCAATA+TGG 0.353188 7_1:+73427887 Msa1036940:CDS
TCCACACATTTATGGGCATA+TGG 0.356236 7_1:-73428288 None:intergenic
GATTATGCCGCTGCAGCTGC+TGG 0.358805 7_1:+73430877 Msa1036940:CDS
TAGCAAGAAAGACAGGCTTT+TGG 0.359604 7_1:+73428045 Msa1036940:CDS
TACCCGCATGGTTAGCCTTA+GGG 0.360330 7_1:+73431128 Msa1036940:CDS
ACTCTCAAGGGTGCAGGCTT+TGG 0.361470 7_1:+73430741 Msa1036940:CDS
GCCGCTGCAGCTGCTGGCGG+TGG 0.361493 7_1:+73430883 Msa1036940:CDS
GGAGGCGGCTATCAGAATTC+AGG 0.361871 7_1:+73431057 Msa1036940:CDS
GGTGGTAGTGGAACGTCTTC+AGG 0.365584 7_1:+73430901 Msa1036940:CDS
ATTTCAGATGAAATTTCTTT+GGG 0.372007 7_1:+73431248 Msa1036940:three_prime_UTR
TTGGGATTGAGTACCTGTTC+TGG 0.372363 7_1:-73429159 None:intergenic
CTATTGGTTGTATTGTTCTT+GGG 0.377103 7_1:-73427428 None:intergenic
CTTCCAAGGTGGCCTTGAAA+AGG 0.377679 7_1:+73428620 Msa1036940:CDS
GAATTTCGAAGCCATTGTTT+TGG 0.378270 7_1:-73427230 None:intergenic
AGAGGACGGGGAACGGGTGG+AGG 0.378402 7_1:+73431039 Msa1036940:CDS
CTTCTTCCTCTTCTCTTCAT+CGG 0.379188 7_1:+73427156 Msa1036940:five_prime_UTR
AGCATAGTATCTGTTACTAT+TGG 0.379378 7_1:-73427444 None:intergenic
CAATGCTTTCAAGATATTCC+TGG 0.380146 7_1:-73428582 None:intergenic
GAGCCTTGATGTAGAGATTA+GGG 0.380490 7_1:-73427676 None:intergenic
CTTCATAGAGTTGAAGGCTT+TGG 0.380827 7_1:-73427774 None:intergenic
AGATTTATATGCATATGATA+TGG 0.383704 7_1:-73430223 None:intergenic
GGACGGGGAACGGGTGGAGG+CGG 0.385300 7_1:+73431042 Msa1036940:CDS
TTTCTGCTTCATAGAGTTGA+AGG 0.385948 7_1:-73427780 None:intergenic
TTGGCTGAGATGACGGTAGA+TGG 0.386051 7_1:+73428694 Msa1036940:CDS
TTAAGGGCATAATGATAAAC+TGG 0.386204 7_1:-73431213 None:intergenic
GCAAGCTGGGATCAGCCAAC+TGG 0.390557 7_1:+73430694 Msa1036940:CDS
GCCTTGCCTTGTTTGAGAAT+AGG 0.394600 7_1:-73430944 None:intergenic
CTACCCGCATGGTTAGCCTT+AGG 0.397357 7_1:+73431127 Msa1036940:CDS
GCTCAGTTTGATGTTAATCC+AGG 0.401276 7_1:+73428256 Msa1036940:CDS
GCAGCTGCTGGCGGTGGTAG+TGG 0.401446 7_1:+73430889 Msa1036940:CDS
TAGATAATTTCTCAGTCAAC+TGG 0.403286 7_1:-73430768 None:intergenic
TATTCTAGAGGACGGGGAAC+GGG 0.408345 7_1:+73431033 Msa1036940:CDS
TTCTTGGGTTGTTCATCAAC+GGG 0.410724 7_1:-73427413 None:intergenic
CCGGTCCTCCTGAAACTGTC+AGG 0.411793 7_1:+73430389 Msa1036940:CDS
AGAGCCTTGATGTAGAGATT+AGG 0.411814 7_1:-73427677 None:intergenic
ATGTAAGATGCACTGATTCC+AGG 0.412950 7_1:-73430252 None:intergenic
ATGACGGACCCATTCATGTC+TGG 0.416244 7_1:+73428425 Msa1036940:CDS
CGTGCAGCACCCAAATATAA+AGG 0.418306 7_1:+73428351 Msa1036940:CDS
ATTAAGGTCCTGCTATTCTC+TGG 0.418859 7_1:-73428805 None:intergenic
ATGACGGTAGATGGAGATAC+TGG 0.421583 7_1:+73428703 Msa1036940:CDS
TCCCGAGACTGAGGAGGAAA+AGG 0.422895 7_1:+73427856 Msa1036940:CDS
CATCATCATCGGACCCATAT+TGG 0.426281 7_1:-73427901 None:intergenic
AACTATCTTTCAGGAAAGGT+TGG 0.427122 7_1:+73430183 Msa1036940:intron
TGATACCAACACATCCATTA+AGG 0.427208 7_1:-73428821 None:intergenic
AACGGTTCTGTGAAACTCCT+TGG 0.433089 7_1:-73429122 None:intergenic
CTGCTATTCTCTGGGAAGGT+GGG 0.434694 7_1:-73428796 None:intergenic
AACAGGGCTATGTCACAGTT+AGG 0.435704 7_1:+73429009 Msa1036940:CDS
GAAACTTGTGCCAAAATCTC+TGG 0.436609 7_1:-73431443 None:intergenic
GCCAGGGGAAGGAAGGGAAC+TGG 0.439050 7_1:+73428142 Msa1036940:CDS
TCAAAGAGATTCTGGAAGCC+AGG 0.439840 7_1:+73428125 Msa1036940:CDS
AAATCAAGGAGGAGGGGCTT+AGG 0.443462 7_1:+73430542 Msa1036940:CDS
GCATATAAATCTTGAGCTCC+TGG 0.445116 7_1:+73430234 Msa1036940:CDS
AGCTCTGGGGTAACAACAAA+TGG 0.445121 7_1:-73428760 None:intergenic
GATTCTGAAACTTCTGAACT+TGG 0.445228 7_1:+73427971 Msa1036940:CDS
GGCATATGGCCACTGAGGCC+TGG 0.449256 7_1:-73428274 None:intergenic
ATGAAAATGAAACTAAGAAA+GGG 0.449516 7_1:+73428395 Msa1036940:CDS
TCCGGCTTCCTAAGCTGATC+AGG 0.451167 7_1:-73427938 None:intergenic
CCATCATCGTCGTCGCTGTC+AGG 0.452998 7_1:-73427479 None:intergenic
AGGACTTTATTATCAAATGC+AGG 0.455945 7_1:+73427828 Msa1036940:CDS
AAATCCAGAATCTAGATTAA+GGG 0.456924 7_1:-73431229 None:intergenic
ATGAGGAGCTTCATGCAAGC+TGG 0.457408 7_1:+73430680 Msa1036940:CDS
TACTGGAGAGGAGGTGAGTG+AGG 0.460289 7_1:+73428720 Msa1036940:CDS
TTCCAAGGTGGCCTTGAAAA+GGG 0.465123 7_1:+73428621 Msa1036940:CDS
GCTTGAAGATTTCCTCGCTC+AGG 0.465289 7_1:+73427706 Msa1036940:CDS
CAGAACAAACATTGGGAGCT+GGG 0.466974 7_1:-73431299 None:intergenic
TCCTGCCCATCTCTCCGTCT+TGG 0.469269 7_1:-73430856 None:intergenic
GTTCTTGGGTTGTTCATCAA+CGG 0.469807 7_1:-73427414 None:intergenic
TCAGAAATGTTGAACTCTCA+AGG 0.471342 7_1:+73430728 Msa1036940:CDS
CATTGGGAGCTGGGCGAGGA+GGG 0.473468 7_1:-73431290 None:intergenic
AACTGTCAGGGATCATGTTA+TGG 0.475362 7_1:+73430402 Msa1036940:CDS
TCAGAATCCGATACGGGCTC+CGG 0.476793 7_1:-73427956 None:intergenic
TCTTACATCTGCTATGCTGC+TGG 0.477105 7_1:+73430267 Msa1036940:CDS
GTTGAAGGCTTTGGCATTGG+TGG 0.478938 7_1:-73427765 None:intergenic
TGAACATTGGCTGCCATGTT+GGG 0.479489 7_1:-73430295 None:intergenic
TGATAAACTGGTAAAAGAAA+AGG 0.479905 7_1:-73431201 None:intergenic
ATGATGAAGAGAAGGTGAAT+AGG 0.482404 7_1:-73430570 None:intergenic
TGCCCATCTCTCCGTCTTGG+AGG 0.483466 7_1:-73430853 None:intergenic
GGGAACTGGAAGGTTTGAAC+AGG 0.485450 7_1:+73428156 Msa1036940:CDS
AAGGGCCCACTGAATCGAAT+AGG 0.485728 7_1:+73427117 None:intergenic
TTCAGTCAAGCAGGTGGGAG+TGG 0.485975 7_1:+73431006 Msa1036940:CDS
TCATGAAAAGACTCCAGAAC+AGG 0.493182 7_1:+73429146 Msa1036940:CDS
GTGAATATGTTGAGAGACTC+AGG 0.493281 7_1:+73428524 Msa1036940:CDS
CAGAATTCAGGGAGGACTCA+AGG 0.493339 7_1:+73431069 Msa1036940:CDS
GAAGCAAGGTTAGGCGGCGG+TGG 0.493372 7_1:+73430820 Msa1036940:CDS
TCTGGAAGCCAGGGGAAGGA+AGG 0.494472 7_1:+73428135 Msa1036940:CDS
ATCATATGATTCTTTGAGTG+TGG 0.495522 7_1:+73430588 Msa1036940:CDS
CTATTCTAGAGGACGGGGAA+CGG 0.495672 7_1:+73431032 Msa1036940:CDS
AAGTTACCCCAGACATGAAT+GGG 0.495970 7_1:-73428433 None:intergenic
TGACATTATTGCATCTCTTG+AGG 0.496021 7_1:+73430468 Msa1036940:CDS
CCTGCTATTCTCTGGGAAGG+TGG 0.496225 7_1:-73428797 None:intergenic
TCAGAACAAACATTGGGAGC+TGG 0.496440 7_1:-73431300 None:intergenic
GTTTCCGTGCAACAAGCTCT+GGG 0.497219 7_1:-73428774 None:intergenic
TGACGGACCCATTCATGTCT+GGG 0.497542 7_1:+73428426 Msa1036940:CDS
CAGGAATATCTTGAAAGCAT+TGG 0.498525 7_1:+73428583 Msa1036940:CDS
AGAATTTGCAGCTTCTGAGC+AGG 0.498923 7_1:-73428217 None:intergenic
ACGGTTCTGTGAAACTCCTT+GGG 0.499322 7_1:-73429121 None:intergenic
CATAAATCAGAACAAACATT+GGG 0.500452 7_1:-73431306 None:intergenic
AGAGTTGAAGGCTTTGGCAT+TGG 0.500616 7_1:-73427768 None:intergenic
TAAGTTACCCCAGACATGAA+TGG 0.503527 7_1:-73428434 None:intergenic
ATGAACATTGGCTGCCATGT+TGG 0.505127 7_1:-73430296 None:intergenic
TTGAAGGCTTTGGCATTGGT+GGG 0.507103 7_1:-73427764 None:intergenic
ACCCGCATGGTTAGCCTTAG+GGG 0.508509 7_1:+73431129 Msa1036940:CDS
CAGAAATGTTGAACTCTCAA+GGG 0.508616 7_1:+73430729 Msa1036940:CDS
AGAATTCAGGGAGGACTCAA+GGG 0.510031 7_1:+73431070 Msa1036940:CDS
TCATTGAACCTGATCAGCTT+AGG 0.511697 7_1:+73427930 Msa1036940:CDS
GGCAGTGGACGTACAGGATA+CGG 0.514533 7_1:+73430964 Msa1036940:CDS
ACCTGATCAGCTTAGGAAGC+CGG 0.515737 7_1:+73427937 Msa1036940:CDS
TCCAAGACGGAGAGATGGGC+AGG 0.515839 7_1:+73430855 Msa1036940:CDS
AAGGTTAGGCGGCGGTGGGT+TGG 0.516660 7_1:+73430825 Msa1036940:CDS
ACGAGGACTCTGACCAATAT+GGG 0.517322 7_1:+73427888 Msa1036940:CDS
ACCACCGCCAGCAGCTGCAG+CGG 0.518050 7_1:-73430884 None:intergenic
GATGAAAATGAAACTAAGAA+AGG 0.519960 7_1:+73428394 Msa1036940:CDS
GTGCCAAAATCTCTGGCTTA+CGG 0.520379 7_1:-73431436 None:intergenic
TGGCGGCTATTCTAGAGGAC+GGG 0.522471 7_1:+73431026 Msa1036940:CDS
TGTTGAACTCTCAAGGGTGC+AGG 0.524552 7_1:+73430735 Msa1036940:CDS
CTGAACTTTATTCTGGTGGA+CGG 0.525465 7_1:+73429082 Msa1036940:CDS
CCACCTTCCCAGAGAATAGC+AGG 0.525702 7_1:+73428797 Msa1036940:CDS
CTCAACATATTCACGTGTGT+GGG 0.525787 7_1:-73428515 None:intergenic
TCCCCTAAGGCTAACCATGC+GGG 0.529790 7_1:-73431130 None:intergenic
TGTTCTTGCACAGAATGTCC+AGG 0.530188 7_1:+73428564 Msa1036940:CDS
AAAAGCTTAGCAAGAAAGAC+AGG 0.531266 7_1:+73428038 Msa1036940:CDS
GAGAAAATTGGCTGAGATGA+CGG 0.532072 7_1:+73428687 Msa1036940:CDS
TATGCCGCTGCAGCTGCTGG+CGG 0.533267 7_1:+73430880 Msa1036940:CDS
GAAGTTTCAGAATCCGATAC+GGG 0.535015 7_1:-73427962 None:intergenic
CAGGACCTTAATGGATGTGT+TGG 0.535493 7_1:+73428816 Msa1036940:CDS
GACTCATAAGCAACAGATCA+CGG 0.536368 7_1:-73428936 None:intergenic
ATGCTATCAAGATCAATGAC+TGG 0.537887 7_1:+73427576 Msa1036940:CDS
TGCCTCCAAGACGGAGAGAT+GGG 0.538731 7_1:+73430851 Msa1036940:CDS
TCTAGAGGACGGGGAACGGG+TGG 0.538825 7_1:+73431036 Msa1036940:CDS
CAAACATTGGGAGCTGGGCG+AGG 0.541139 7_1:-73431294 None:intergenic
TTGTCTGAACTTTATTCTGG+TGG 0.542410 7_1:+73429078 Msa1036940:CDS
AGGCAAGGCAGTGGACGTAC+AGG 0.542622 7_1:+73430958 Msa1036940:CDS
AGCGCTCCTATTCGATTCAG+TGG 0.543379 7_1:-73427123 None:intergenic
CAAGCTGGGATCAGCCAACT+GGG 0.543584 7_1:+73430695 Msa1036940:CDS
GTGGAACGTCTTCAGGTGGC+AGG 0.543676 7_1:+73430908 Msa1036940:CDS
TGAGGAGCTTCATGCAAGCT+GGG 0.544437 7_1:+73430681 Msa1036940:CDS
ATGATGATGGCGATGCTCCA+TGG 0.544655 7_1:+73428011 Msa1036940:CDS
CTCTTTCATTACTCTCTGCA+AGG 0.546235 7_1:-73430792 None:intergenic
TCCTATTCTCAAACAAGGCA+AGG 0.549766 7_1:+73430943 Msa1036940:CDS
GTATCACTAATATACAAATA+CGG 0.550143 7_1:+73428838 Msa1036940:CDS
AGAAGTTTCAGAATCCGATA+CGG 0.551991 7_1:-73427963 None:intergenic
CCATAAATCAGAACAAACAT+TGG 0.552425 7_1:-73431307 None:intergenic
CTGCCTCCAAGACGGAGAGA+TGG 0.552751 7_1:+73430850 Msa1036940:CDS
TGATGATGGCGATGCTCCAT+GGG 0.554683 7_1:+73428012 Msa1036940:CDS
GATCCCTAATCTCTACATCA+AGG 0.555343 7_1:+73427673 Msa1036940:CDS
TGAACTTTATTCTGGTGGAC+GGG 0.556639 7_1:+73429083 Msa1036940:CDS
TTAAGGTCCTGCTATTCTCT+GGG 0.558004 7_1:-73428804 None:intergenic
CAAAGAGATTCTGGAAGCCA+GGG 0.558224 7_1:+73428126 Msa1036940:CDS
GAATTTCCGCCGCTTACTTG+AGG 0.559029 7_1:+73430345 Msa1036940:CDS
CCTGACAGTTTCAGGAGGAC+CGG 0.559804 7_1:-73430389 None:intergenic
TAGGAAGCCGGAGCCCGTAT+CGG 0.561658 7_1:+73427949 Msa1036940:CDS
GAAGGACAAAATCAAGGAGG+AGG 0.562147 7_1:+73430534 Msa1036940:CDS
TATAAAGGTTGATGATTCTG+TGG 0.562279 7_1:+73428366 Msa1036940:CDS
GCATTATCGTTCAGTCAAGC+AGG 0.562994 7_1:+73430997 Msa1036940:CDS
TCTCAAACAAGGCAAGGCAG+TGG 0.563066 7_1:+73430949 Msa1036940:CDS
CAGGGAGAGTCCCGAGACTG+AGG 0.564075 7_1:+73427847 Msa1036940:CDS
CTGGAAGCCAGGGGAAGGAA+GGG 0.564616 7_1:+73428136 Msa1036940:CDS
CTTCTGAACTTGGTAATGAC+AGG 0.565325 7_1:+73427981 Msa1036940:CDS
AATGCTGAAGGACAAAATCA+AGG 0.565908 7_1:+73430528 Msa1036940:CDS
AGAATCATATGATGAAGAGA+AGG 0.566374 7_1:-73430578 None:intergenic
AAGAGATGCAATAATGTCAA+AGG 0.567228 7_1:-73430464 None:intergenic
GTTGCTTCATAAACCTCATG+TGG 0.568517 7_1:-73428664 None:intergenic
GTGTCCCATGTGATCTCACT+AGG 0.569429 7_1:-73428088 None:intergenic
TCAACGGGTTCAGTATCGCT+AGG 0.573297 7_1:-73427398 None:intergenic
CCTGACAGCGACGACGATGA+TGG 0.574250 7_1:+73427479 Msa1036940:CDS
ACGCTTAGCATCATGAACAT+TGG 0.575475 7_1:-73430308 None:intergenic
ACATTGGGAGCTGGGCGAGG+AGG 0.575573 7_1:-73431291 None:intergenic
ATCATGTTATGGCTGCCACA+AGG 0.575690 7_1:+73430413 Msa1036940:CDS
GAGGCGGCTATCAGAATTCA+GGG 0.577279 7_1:+73431058 Msa1036940:CDS
ACAGCTTGACAAAGTTATGC+GGG 0.578754 7_1:+73427634 Msa1036940:CDS
TTATTGCATCTCTTGAGGTG+TGG 0.579762 7_1:+73430473 Msa1036940:CDS
TCTCAACATATTCACGTGTG+TGG 0.579942 7_1:-73428516 None:intergenic
TGAAAATGAAACTAAGAAAG+GGG 0.580645 7_1:+73428396 Msa1036940:CDS
AGTGAGAAACAAACATTCAC+CGG 0.580815 7_1:+73430370 Msa1036940:CDS
AATGATCTCATCATCATCAT+CGG 0.581104 7_1:-73427912 None:intergenic
CTGAAAATAATGCACCCAGT+TGG 0.581929 7_1:-73430709 None:intergenic
GGACTTTATTATCAAATGCA+GGG 0.582026 7_1:+73427829 Msa1036940:CDS
CGGTCCTCCTGAAACTGTCA+GGG 0.584556 7_1:+73430390 Msa1036940:CDS
AAAAGCCTAGTGAGATCACA+TGG 0.585381 7_1:+73428083 Msa1036940:CDS
GCTACAGAAGCAAGGTTAGG+CGG 0.590150 7_1:+73430814 Msa1036940:CDS
GGTCCTGCTATTCTCTGGGA+AGG 0.590426 7_1:-73428800 None:intergenic
CATTTACTACAAACCACATG+AGG 0.590910 7_1:+73428651 Msa1036940:CDS
AGATTCTGGAAGCCAGGGGA+AGG 0.591193 7_1:+73428131 Msa1036940:CDS
CTAGGTTCATCATTATCAGT+GGG 0.591351 7_1:-73427380 None:intergenic
GACAGGCCTGGTGATGATGA+TGG 0.591922 7_1:+73427998 Msa1036940:CDS
GTCAAGCACGAACTCCCCTA+AGG 0.592556 7_1:-73431143 None:intergenic
AGAGCTACAGAAGCAAGGTT+AGG 0.594295 7_1:+73430811 Msa1036940:CDS
ACTCATAAGCAACAGATCAC+GGG 0.595404 7_1:-73428935 None:intergenic
AAGCAAGGTTAGGCGGCGGT+GGG 0.595912 7_1:+73430821 Msa1036940:CDS
TGCTATCAAGATCAATGACT+GGG 0.597590 7_1:+73427577 Msa1036940:CDS
AGGAAAGGTTGGAAAGAAGA+CGG 0.598493 7_1:+73430194 Msa1036940:intron
AGATTTCAAAGCTTCTTCCA+AGG 0.601457 7_1:+73428606 Msa1036940:CDS
GCTAGGTTCATCATTATCAG+TGG 0.602358 7_1:-73427381 None:intergenic
ATGAAAGAGCTACAGAAGCA+AGG 0.604351 7_1:+73430806 Msa1036940:CDS
GCATCGCCATCATCATCACC+AGG 0.604625 7_1:-73428004 None:intergenic
GGGCTGGTTTCTGAAGCACA+TGG 0.606401 7_1:+73429051 Msa1036940:CDS
GTGGCGGCTATTCTAGAGGA+CGG 0.606807 7_1:+73431025 Msa1036940:CDS
CGTATTCCGATGAAGAGAAG+AGG 0.606810 7_1:-73427162 None:intergenic
AGTCAAGCAGGTGGGAGTGG+CGG 0.608359 7_1:+73431009 Msa1036940:CDS
GGCTTCGAAATTCTGGACCC+AGG 0.610020 7_1:+73427240 Msa1036940:CDS
CGTAGATACTTCTACCCGCA+TGG 0.610484 7_1:+73431116 Msa1036940:CDS
GTAAAAGAACTGCTTGCCCA+AGG 0.614524 7_1:+73429105 Msa1036940:CDS
GAATTCAGGGAGGACTCAAG+GGG 0.615559 7_1:+73431071 Msa1036940:CDS
AAGGACAAAATCAAGGAGGA+GGG 0.615804 7_1:+73430535 Msa1036940:CDS
GGGAGTGGCGGCTATTCTAG+AGG 0.617938 7_1:+73431021 Msa1036940:CDS
GGCGGCTATTCTAGAGGACG+GGG 0.620265 7_1:+73431027 Msa1036940:CDS
ACTTGTCCTATTCTCAAACA+AGG 0.620485 7_1:+73430938 Msa1036940:CDS
GCGCTCCTATTCGATTCAGT+GGG 0.621753 7_1:-73427122 None:intergenic
CTTCGTGTTAGTTTGTTGTG+TGG 0.622006 7_1:+73431393 Msa1036940:three_prime_UTR
ACAGAAGCAAGGTTAGGCGG+CGG 0.622574 7_1:+73430817 Msa1036940:CDS
TCCATTAATAAGAACCCTTG+TGG 0.625098 7_1:-73430428 None:intergenic
TTACCCCAGAGCTTGTTGCA+CGG 0.625487 7_1:+73428770 Msa1036940:CDS
GGAGAGTCCCGAGACTGAGG+AGG 0.625679 7_1:+73427850 Msa1036940:CDS
TCATGTTATGGCTGCCACAA+GGG 0.627218 7_1:+73430414 Msa1036940:CDS
CACTGACCTCAAGTAAGCGG+CGG 0.627273 7_1:-73430351 None:intergenic
TAACAAGCAAACCAAAACAA+TGG 0.628807 7_1:+73427219 Msa1036940:exon
GGTTGGATCTGCCTCCAAGA+CGG 0.630650 7_1:+73430842 Msa1036940:CDS
GAACTTGGTAATGACAGGCC+TGG 0.632446 7_1:+73427986 Msa1036940:CDS
TTTCAAAGCTTCTTCCAAGG+TGG 0.634144 7_1:+73428609 Msa1036940:CDS
GGACGTACAGGATACGGTGG+AGG 0.637438 7_1:+73430970 Msa1036940:CDS
GAACGTCTTCAGGTGGCAGG+TGG 0.637601 7_1:+73430911 Msa1036940:CDS
AAGAAAGGGGATGACTATGA+CGG 0.642172 7_1:+73428409 Msa1036940:CDS
GTGTTCATAGTATTGTCAGT+AGG 0.642718 7_1:+73430647 Msa1036940:CDS
AACAGCTTGACAAAGTTATG+CGG 0.643934 7_1:+73427633 Msa1036940:CDS
TTATCGTTCAGTCAAGCAGG+TGG 0.645285 7_1:+73431000 Msa1036940:CDS
TCAACATATTCACGTGTGTG+GGG 0.645878 7_1:-73428514 None:intergenic
GGGGAAGGAAGGGAACTGGA+AGG 0.649425 7_1:+73428146 Msa1036940:CDS
AGATGGAGATACTGGAGAGG+AGG 0.649696 7_1:+73428711 Msa1036940:CDS
TATTAATGGAGATTTCCAGA+AGG 0.655339 7_1:+73430441 Msa1036940:CDS
GCGGGTAGAAGTATCTACGT+GGG 0.657328 7_1:-73431112 None:intergenic
GCAAGAAAATGTTCACCACA+TGG 0.657602 7_1:+73428963 Msa1036940:CDS
CAAACTCATCTAGAAGAGCA+TGG 0.657667 7_1:-73428906 None:intergenic
GGTAGTGGAACGTCTTCAGG+TGG 0.658306 7_1:+73430904 Msa1036940:CDS
TATCGTTCAGTCAAGCAGGT+GGG 0.659073 7_1:+73431001 Msa1036940:CDS
TCTCACTGACCTCAAGTAAG+CGG 0.659845 7_1:-73430354 None:intergenic
CTCCCCTAAGGCTAACCATG+CGG 0.664230 7_1:-73431131 None:intergenic
AAAGTGCGTGCAGAATATGC+TGG 0.667690 7_1:+73428312 Msa1036940:CDS
CAGTAGGATGATGATCAATG+AGG 0.670922 7_1:+73430663 Msa1036940:CDS
GCTGCTGGAAGTTCCCAACA+TGG 0.671778 7_1:+73430282 Msa1036940:CDS
TATTAGCAGAAGCCTGAGCG+AGG 0.672169 7_1:-73427718 None:intergenic
GCCATATGCCCATAAATGTG+TGG 0.678845 7_1:+73428287 Msa1036940:CDS
TGGGGTAACAACAAATGGAG+CGG 0.679470 7_1:-73428755 None:intergenic
GACGGACCCATTCATGTCTG+GGG 0.682471 7_1:+73428427 Msa1036940:CDS
TGAATATGTTGAGAGACTCA+GGG 0.682868 7_1:+73428525 Msa1036940:CDS
GATGTTAATCCAGGCCTCAG+TGG 0.685893 7_1:+73428265 Msa1036940:CDS
CTGACAATACTATGAACACG+AGG 0.689117 7_1:-73430643 None:intergenic
CGGGTAGAAGTATCTACGTG+GGG 0.693629 7_1:-73431111 None:intergenic
AGGACAAAATCAAGGAGGAG+GGG 0.693984 7_1:+73430536 Msa1036940:CDS
GGTAGATGGAGATACTGGAG+AGG 0.700973 7_1:+73428708 Msa1036940:CDS
ATTCTTGATCTGATCAACAG+TGG 0.701566 7_1:-73427555 None:intergenic
AAAGAGATTCTGGAAGCCAG+GGG 0.701656 7_1:+73428127 Msa1036940:CDS
TGTGCAAGAACAACAAACAG+AGG 0.705129 7_1:-73428553 None:intergenic
TTATGGGCATATGGCCACTG+AGG 0.707427 7_1:-73428279 None:intergenic
TGATCCCTGACAGTTTCAGG+AGG 0.717851 7_1:-73430394 None:intergenic
TTTCCGTGCAACAAGCTCTG+GGG 0.717924 7_1:-73428773 None:intergenic
AATTCAGGGAGGACTCAAGG+GGG 0.722566 7_1:+73431072 Msa1036940:CDS
TGCGGGTAGAAGTATCTACG+TGG 0.731485 7_1:-73431113 None:intergenic
GGAAAAGGATGAAGACGACG+AGG 0.738947 7_1:+73427871 Msa1036940:CDS
AAAGCCTAGTGAGATCACAT+GGG 0.747188 7_1:+73428084 Msa1036940:CDS
GCTGAAGGACAAAATCAAGG+AGG 0.756411 7_1:+73430531 Msa1036940:CDS
GAAGAACAATAAGCAATACG+AGG 0.757858 7_1:+73427808 Msa1036940:CDS
AGTGGACGTACAGGATACGG+TGG 0.758461 7_1:+73430967 Msa1036940:CDS
TCTGTGTTGAAATGTCCATG+TGG 0.797878 7_1:-73428978 None:intergenic
GCGGCTATCAGAATTCAGGG+AGG 0.799750 7_1:+73431061 Msa1036940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAATTTATTTATTATTGTT+AGG + chr7_1:73427331-73427350 Msa1036940:intron 10.0%
!! CAATTTATTTATTATTGTTA+GGG + chr7_1:73427332-73427351 Msa1036940:intron 10.0%
!!! ATTTTGAGGTATAATATTAT+CGG + chr7_1:73429435-73429454 Msa1036940:intron 15.0%
!!! TAGTTAATTTTTTTTCTTGA+GGG + chr7_1:73431367-73431386 Msa1036940:three_prime_UTR 15.0%
!! AATCATCAACCTTTATATTT+GGG - chr7_1:73428363-73428382 None:intergenic 20.0%
!! ATGAAAATGAAACTAAGAAA+GGG + chr7_1:73428395-73428414 Msa1036940:CDS 20.0%
!! GTATCACTAATATACAAATA+CGG + chr7_1:73428838-73428857 Msa1036940:CDS 20.0%
!! TTTCTATGAAAAATCAAACA+GGG - chr7_1:73429335-73429354 None:intergenic 20.0%
!! ATTTCTATGAAAAATCAAAC+AGG - chr7_1:73429336-73429355 None:intergenic 20.0%
!! TTAAACTGATAAAGTATGAA+AGG + chr7_1:73429682-73429701 Msa1036940:intron 20.0%
!! AGATTTATATGCATATGATA+TGG - chr7_1:73430226-73430245 None:intergenic 20.0%
!! ATTTCAGATGAAATTTCTTT+GGG + chr7_1:73431248-73431267 Msa1036940:three_prime_UTR 20.0%
!!! CTAGTTAATTTTTTTTCTTG+AGG + chr7_1:73431366-73431385 Msa1036940:three_prime_UTR 20.0%
!!! AGTTAATTTTTTTTCTTGAG+GGG + chr7_1:73431368-73431387 Msa1036940:three_prime_UTR 20.0%
!!! TTGCTTGTTATGAGAATTTA+GGG - chr7_1:73427209-73427228 None:intergenic 25.0%
!!! TTTGCTTGTTATGAGAATTT+AGG - chr7_1:73427210-73427229 None:intergenic 25.0%
! GAATCATCAACCTTTATATT+TGG - chr7_1:73428364-73428383 None:intergenic 25.0%
! GATGAAAATGAAACTAAGAA+AGG + chr7_1:73428394-73428413 Msa1036940:CDS 25.0%
! TGAAAATGAAACTAAGAAAG+GGG + chr7_1:73428396-73428415 Msa1036940:CDS 25.0%
!!! AACACAGATACTTTTTAACA+GGG + chr7_1:73428993-73429012 Msa1036940:CDS 25.0%
! ACATCCATTTGAAAAAAGTT+GGG - chr7_1:73429180-73429199 None:intergenic 25.0%
! AACATCCATTTGAAAAAAGT+TGG - chr7_1:73429181-73429200 None:intergenic 25.0%
! CTTTATTACTGTACTTATTG+TGG + chr7_1:73429212-73429231 Msa1036940:intron 25.0%
! ATCTTTACATTCATATTGAC+TGG + chr7_1:73429403-73429422 Msa1036940:intron 25.0%
!! TCTTTACATTCATATTGACT+GGG + chr7_1:73429404-73429423 Msa1036940:intron 25.0%
! TTGAAAATCTTGAGTTAAGA+GGG - chr7_1:73429726-73429745 None:intergenic 25.0%
! TTTGAAAATCTTGAGTTAAG+AGG - chr7_1:73429727-73429746 None:intergenic 25.0%
!! CAAGATTTTCAAATTACCTT+TGG + chr7_1:73429734-73429753 Msa1036940:intron 25.0%
! TTTCAGTTACTATCAAATTC+AGG - chr7_1:73429790-73429809 None:intergenic 25.0%
! GAAAGTGATATCTAATAGAA+TGG - chr7_1:73429906-73429925 None:intergenic 25.0%
!! TAACTGAAAGTTTTCTATCT+CGG + chr7_1:73429948-73429967 Msa1036940:intron 25.0%
! TGAAGACTCATACTTTATAT+TGG + chr7_1:73430031-73430050 Msa1036940:intron 25.0%
!!! GGAATGCATTTTTTTGTTTT+TGG + chr7_1:73430052-73430071 Msa1036940:intron 25.0%
!!! TTGTTTTTGGAAATCCTAAT+TGG + chr7_1:73430065-73430084 Msa1036940:intron 25.0%
!!! CTCTTTTTTAACTATCTTTC+AGG + chr7_1:73430174-73430193 Msa1036940:intron 25.0%
!!! TTTTAACTATCTTTCAGGAA+AGG + chr7_1:73430179-73430198 Msa1036940:intron 25.0%
! TGATAAACTGGTAAAAGAAA+AGG - chr7_1:73431204-73431223 None:intergenic 25.0%
! AAATCCAGAATCTAGATTAA+GGG - chr7_1:73431232-73431251 None:intergenic 25.0%
! GATTTCAGATGAAATTTCTT+TGG + chr7_1:73431247-73431266 Msa1036940:three_prime_UTR 25.0%
! CATAAATCAGAACAAACATT+GGG - chr7_1:73431309-73431328 None:intergenic 25.0%
TAACAAGCAAACCAAAACAA+TGG + chr7_1:73427219-73427238 Msa1036940:exon 30.0%
! CTATTGGTTGTATTGTTCTT+GGG - chr7_1:73427431-73427450 None:intergenic 30.0%
! ACTATTGGTTGTATTGTTCT+TGG - chr7_1:73427432-73427451 None:intergenic 30.0%
AGCATAGTATCTGTTACTAT+TGG - chr7_1:73427447-73427466 None:intergenic 30.0%
AGGACTTTATTATCAAATGC+AGG + chr7_1:73427828-73427847 Msa1036940:CDS 30.0%
GGACTTTATTATCAAATGCA+GGG + chr7_1:73427829-73427848 Msa1036940:CDS 30.0%
AATGATCTCATCATCATCAT+CGG - chr7_1:73427915-73427934 None:intergenic 30.0%
! TTTAGCAACTTTTGTTAGGA+AGG - chr7_1:73428194-73428213 None:intergenic 30.0%
!!! GTGTTTTAGCAACTTTTGTT+AGG - chr7_1:73428198-73428217 None:intergenic 30.0%
!!! CACTTTTTCCACACATTTAT+GGG - chr7_1:73428298-73428317 None:intergenic 30.0%
!! TATAAAGGTTGATGATTCTG+TGG + chr7_1:73428366-73428385 Msa1036940:CDS 30.0%
TTATGAAGCAACGAGAAAAT+TGG + chr7_1:73428675-73428694 Msa1036940:CDS 30.0%
!! CAACACAGATACTTTTTAAC+AGG + chr7_1:73428992-73429011 Msa1036940:CDS 30.0%
TGTTTGTCTGAACTTTATTC+TGG + chr7_1:73429075-73429094 Msa1036940:CDS 30.0%
!!! CAATCCCAACTTTTTTCAAA+TGG + chr7_1:73429173-73429192 Msa1036940:intron 30.0%
TATTGTGGTCAAGTTCATAT+AGG + chr7_1:73429227-73429246 Msa1036940:intron 30.0%
! ATTTAAAATCAACTGTGCTC+TGG + chr7_1:73429357-73429376 Msa1036940:intron 30.0%
! ACTGGGATTAATCAATTTTG+AGG + chr7_1:73429421-73429440 Msa1036940:intron 30.0%
TTGAGGTATAATATTATCGG+CGG + chr7_1:73429438-73429457 Msa1036940:intron 30.0%
TACAGAAGTTGCAAATTTCT+TGG + chr7_1:73429578-73429597 Msa1036940:intron 30.0%
TTATACAACGGTTGTACATA+TGG + chr7_1:73429627-73429646 Msa1036940:intron 30.0%
ATGGAAAACATAGTAAGCAA+AGG + chr7_1:73429646-73429665 Msa1036940:intron 30.0%
ACATAGTAAGCAAAGGAAAA+AGG + chr7_1:73429653-73429672 Msa1036940:intron 30.0%
TGAAAATCTTGAGTTAAGAG+GGG - chr7_1:73429725-73429744 None:intergenic 30.0%
GATAGTAACTGAAATAGATG+AGG + chr7_1:73429796-73429815 Msa1036940:intron 30.0%
AAATCCTAGTCCAAAAACTT+GGG - chr7_1:73429985-73430004 None:intergenic 30.0%
AAAATCCTAGTCCAAAAACT+TGG - chr7_1:73429986-73430005 None:intergenic 30.0%
ATAAATCTCTCACATTTCCA+AGG - chr7_1:73430137-73430156 None:intergenic 30.0%
TATTAATGGAGATTTCCAGA+AGG + chr7_1:73430441-73430460 Msa1036940:CDS 30.0%
AAGAGATGCAATAATGTCAA+AGG - chr7_1:73430467-73430486 None:intergenic 30.0%
AGAATCATATGATGAAGAGA+AGG - chr7_1:73430581-73430600 None:intergenic 30.0%
ATCATATGATTCTTTGAGTG+TGG + chr7_1:73430588-73430607 Msa1036940:CDS 30.0%
TAGATAATTTCTCAGTCAAC+TGG - chr7_1:73430771-73430790 None:intergenic 30.0%
! TTAAGGGCATAATGATAAAC+TGG - chr7_1:73431216-73431235 None:intergenic 30.0%
GAAATCCAGAATCTAGATTA+AGG - chr7_1:73431233-73431252 None:intergenic 30.0%
CCATAAATCAGAACAAACAT+TGG - chr7_1:73431310-73431329 None:intergenic 30.0%
CCAATGTTTGTTCTGATTTA+TGG + chr7_1:73431307-73431326 Msa1036940:three_prime_UTR 30.0%
! GAATTTCGAAGCCATTGTTT+TGG - chr7_1:73427233-73427252 None:intergenic 35.0%
AAACAATGGCTTCGAAATTC+TGG + chr7_1:73427233-73427252 Msa1036940:exon 35.0%
GTTAGCATAGCATAATACCT+GGG - chr7_1:73427260-73427279 None:intergenic 35.0%
AGTTAGCATAGCATAATACC+TGG - chr7_1:73427261-73427280 None:intergenic 35.0%
AATAAACACAGAGAGAGAGA+CGG - chr7_1:73427312-73427331 None:intergenic 35.0%
CTAGGTTCATCATTATCAGT+GGG - chr7_1:73427383-73427402 None:intergenic 35.0%
!! AGATAAGCGTTTTGATGAGA+TGG + chr7_1:73427529-73427548 Msa1036940:CDS 35.0%
ATTCTTGATCTGATCAACAG+TGG - chr7_1:73427558-73427577 None:intergenic 35.0%
ATGCTATCAAGATCAATGAC+TGG + chr7_1:73427576-73427595 Msa1036940:CDS 35.0%
TGCTATCAAGATCAATGACT+GGG + chr7_1:73427577-73427596 Msa1036940:CDS 35.0%
AACAGCTTGACAAAGTTATG+CGG + chr7_1:73427633-73427652 Msa1036940:CDS 35.0%
! GTAGAGATTAGGGATCTTTT+GGG - chr7_1:73427669-73427688 None:intergenic 35.0%
! TGTAGAGATTAGGGATCTTT+TGG - chr7_1:73427670-73427689 None:intergenic 35.0%
TTTCTGCTTCATAGAGTTGA+AGG - chr7_1:73427783-73427802 None:intergenic 35.0%
GAAGAACAATAAGCAATACG+AGG + chr7_1:73427808-73427827 Msa1036940:CDS 35.0%
AGAAGTTTCAGAATCCGATA+CGG - chr7_1:73427966-73427985 None:intergenic 35.0%
!! GATTCTGAAACTTCTGAACT+TGG + chr7_1:73427971-73427990 Msa1036940:CDS 35.0%
AAAAGCTTAGCAAGAAAGAC+AGG + chr7_1:73428038-73428057 Msa1036940:CDS 35.0%
CAAGAAGTTCAAAGAGATTC+TGG + chr7_1:73428117-73428136 Msa1036940:CDS 35.0%
!!! GCACTTTTTCCACACATTTA+TGG - chr7_1:73428299-73428318 None:intergenic 35.0%
TGAATATGTTGAGAGACTCA+GGG + chr7_1:73428525-73428544 Msa1036940:CDS 35.0%
CAATGCTTTCAAGATATTCC+TGG - chr7_1:73428585-73428604 None:intergenic 35.0%
! CAGGAATATCTTGAAAGCAT+TGG + chr7_1:73428583-73428602 Msa1036940:CDS 35.0%
AGATTTCAAAGCTTCTTCCA+AGG + chr7_1:73428606-73428625 Msa1036940:CDS 35.0%
! AATGAGTTCAACCCTTTTCA+AGG - chr7_1:73428635-73428654 None:intergenic 35.0%
CATTTACTACAAACCACATG+AGG + chr7_1:73428651-73428670 Msa1036940:CDS 35.0%
TGATACCAACACATCCATTA+AGG - chr7_1:73428824-73428843 None:intergenic 35.0%
TTGTCTGAACTTTATTCTGG+TGG + chr7_1:73429078-73429097 Msa1036940:CDS 35.0%
! CTGGAGTCTTTTCATGATAA+CGG - chr7_1:73429143-73429162 None:intergenic 35.0%
CAAATGGATGTTCAATAGCA+TGG + chr7_1:73429189-73429208 Msa1036940:intron 35.0%
!! TTTCTTTAGAGCAGTCACTT+TGG - chr7_1:73429311-73429330 None:intergenic 35.0%
! TTACCTTTGGTAGTTCAGTT+TGG + chr7_1:73429747-73429766 Msa1036940:intron 35.0%
CATAGTCTGATTTCACTTCA+AGG - chr7_1:73429847-73429866 None:intergenic 35.0%
TTCAGTTATGCTCAAACAAG+TGG - chr7_1:73429936-73429955 None:intergenic 35.0%
! TGAAAGTTTTCTATCTCGGT+AGG + chr7_1:73429952-73429971 Msa1036940:intron 35.0%
AATCCTAGTCCAAAAACTTG+GGG - chr7_1:73429984-73430003 None:intergenic 35.0%
GATGACAAAAGTTGCCAATT+AGG - chr7_1:73430082-73430101 None:intergenic 35.0%
AACTATCTTTCAGGAAAGGT+TGG + chr7_1:73430183-73430202 Msa1036940:intron 35.0%
AGTGAGAAACAAACATTCAC+CGG + chr7_1:73430370-73430389 Msa1036940:CDS 35.0%
TCCATTAATAAGAACCCTTG+TGG - chr7_1:73430431-73430450 None:intergenic 35.0%
TGACATTATTGCATCTCTTG+AGG + chr7_1:73430468-73430487 Msa1036940:CDS 35.0%
!! GTCCTTCAGCATTTTTAGAA+CGG - chr7_1:73430521-73430540 None:intergenic 35.0%
AATGCTGAAGGACAAAATCA+AGG + chr7_1:73430528-73430547 Msa1036940:CDS 35.0%
ATGATGAAGAGAAGGTGAAT+AGG - chr7_1:73430573-73430592 None:intergenic 35.0%
GTGTTCATAGTATTGTCAGT+AGG + chr7_1:73430647-73430666 Msa1036940:CDS 35.0%
TCAGAAATGTTGAACTCTCA+AGG + chr7_1:73430728-73430747 Msa1036940:CDS 35.0%
CAGAAATGTTGAACTCTCAA+GGG + chr7_1:73430729-73430748 Msa1036940:CDS 35.0%
ACTTGTCCTATTCTCAAACA+AGG + chr7_1:73430938-73430957 Msa1036940:CDS 35.0%
TATGCCCTTAATCTAGATTC+TGG + chr7_1:73431225-73431244 Msa1036940:three_prime_UTR 35.0%
CTTCTTCCTCTTCTCTTCAT+CGG + chr7_1:73427156-73427175 Msa1036940:five_prime_UTR 40.0%
GCTAGGTTCATCATTATCAG+TGG - chr7_1:73427384-73427403 None:intergenic 40.0%
! TTCTTGGGTTGTTCATCAAC+GGG - chr7_1:73427416-73427435 None:intergenic 40.0%
! GTTCTTGGGTTGTTCATCAA+CGG - chr7_1:73427417-73427436 None:intergenic 40.0%
! CAGACTTAACAACACGCTTT+TGG - chr7_1:73427505-73427524 None:intergenic 40.0%
ACAGCTTGACAAAGTTATGC+GGG + chr7_1:73427634-73427653 Msa1036940:CDS 40.0%
GATCCCTAATCTCTACATCA+AGG + chr7_1:73427673-73427692 Msa1036940:CDS 40.0%
GAGCCTTGATGTAGAGATTA+GGG - chr7_1:73427679-73427698 None:intergenic 40.0%
AGAGCCTTGATGTAGAGATT+AGG - chr7_1:73427680-73427699 None:intergenic 40.0%
CTTCATAGAGTTGAAGGCTT+TGG - chr7_1:73427777-73427796 None:intergenic 40.0%
TCATTGAACCTGATCAGCTT+AGG + chr7_1:73427930-73427949 Msa1036940:CDS 40.0%
GAAGTTTCAGAATCCGATAC+GGG - chr7_1:73427965-73427984 None:intergenic 40.0%
!! CTTCTGAACTTGGTAATGAC+AGG + chr7_1:73427981-73428000 Msa1036940:CDS 40.0%
! TTGCTAAGCTTTTGATCCCA+TGG - chr7_1:73428031-73428050 None:intergenic 40.0%
! TAGCAAGAAAGACAGGCTTT+TGG + chr7_1:73428045-73428064 Msa1036940:CDS 40.0%
AAAAGCCTAGTGAGATCACA+TGG + chr7_1:73428083-73428102 Msa1036940:CDS 40.0%
AAAGCCTAGTGAGATCACAT+GGG + chr7_1:73428084-73428103 Msa1036940:CDS 40.0%
GCTCAGTTTGATGTTAATCC+AGG + chr7_1:73428256-73428275 Msa1036940:CDS 40.0%
TCCACACATTTATGGGCATA+TGG - chr7_1:73428291-73428310 None:intergenic 40.0%
AAGAAAGGGGATGACTATGA+CGG + chr7_1:73428409-73428428 Msa1036940:CDS 40.0%
AAGTTACCCCAGACATGAAT+GGG - chr7_1:73428436-73428455 None:intergenic 40.0%
TAAGTTACCCCAGACATGAA+TGG - chr7_1:73428437-73428456 None:intergenic 40.0%
CTGCAAGCTCTTGAAAAACT+CGG - chr7_1:73428485-73428504 None:intergenic 40.0%
TCAACATATTCACGTGTGTG+GGG - chr7_1:73428517-73428536 None:intergenic 40.0%
CTCAACATATTCACGTGTGT+GGG - chr7_1:73428518-73428537 None:intergenic 40.0%
TCTCAACATATTCACGTGTG+TGG - chr7_1:73428519-73428538 None:intergenic 40.0%
GTGAATATGTTGAGAGACTC+AGG + chr7_1:73428524-73428543 Msa1036940:CDS 40.0%
TGTGCAAGAACAACAAACAG+AGG - chr7_1:73428556-73428575 None:intergenic 40.0%
TTTCAAAGCTTCTTCCAAGG+TGG + chr7_1:73428609-73428628 Msa1036940:CDS 40.0%
GTTGCTTCATAAACCTCATG+TGG - chr7_1:73428667-73428686 None:intergenic 40.0%
GAGAAAATTGGCTGAGATGA+CGG + chr7_1:73428687-73428706 Msa1036940:CDS 40.0%
TTAAGGTCCTGCTATTCTCT+GGG - chr7_1:73428807-73428826 None:intergenic 40.0%
ATTAAGGTCCTGCTATTCTC+TGG - chr7_1:73428808-73428827 None:intergenic 40.0%
AGAGAATAGCAGGACCTTAA+TGG + chr7_1:73428807-73428826 Msa1036940:CDS 40.0%
CAAACTCATCTAGAAGAGCA+TGG - chr7_1:73428909-73428928 None:intergenic 40.0%
ACTCATAAGCAACAGATCAC+GGG - chr7_1:73428938-73428957 None:intergenic 40.0%
GACTCATAAGCAACAGATCA+CGG - chr7_1:73428939-73428958 None:intergenic 40.0%
GCAAGAAAATGTTCACCACA+TGG + chr7_1:73428963-73428982 Msa1036940:CDS 40.0%
TCTGTGTTGAAATGTCCATG+TGG - chr7_1:73428981-73429000 None:intergenic 40.0%
! GTCTATGTGCTTTTCGTGTT+GGG + chr7_1:73429031-73429050 Msa1036940:CDS 40.0%
CTGAACTTTATTCTGGTGGA+CGG + chr7_1:73429082-73429101 Msa1036940:CDS 40.0%
! TGAACTTTATTCTGGTGGAC+GGG + chr7_1:73429083-73429102 Msa1036940:CDS 40.0%
TCATGAAAAGACTCCAGAAC+AGG + chr7_1:73429146-73429165 Msa1036940:CDS 40.0%
TAGCCAAACTGAACTACCAA+AGG - chr7_1:73429753-73429772 None:intergenic 40.0%
AGGAAAGGTTGGAAAGAAGA+CGG + chr7_1:73430194-73430213 Msa1036940:intron 40.0%
GCATATAAATCTTGAGCTCC+TGG + chr7_1:73430234-73430253 Msa1036940:CDS 40.0%
!! ATGTAAGATGCACTGATTCC+AGG - chr7_1:73430255-73430274 None:intergenic 40.0%
ACGCTTAGCATCATGAACAT+TGG - chr7_1:73430311-73430330 None:intergenic 40.0%
AACTGTCAGGGATCATGTTA+TGG + chr7_1:73430402-73430421 Msa1036940:CDS 40.0%
GCCACAAGGGTTCTTATTAA+TGG + chr7_1:73430427-73430446 Msa1036940:CDS 40.0%
CAATAATGTCAAAGGCCTTC+TGG - chr7_1:73430459-73430478 None:intergenic 40.0%
TTATTGCATCTCTTGAGGTG+TGG + chr7_1:73430473-73430492 Msa1036940:CDS 40.0%
!! CACCGTTCTAAAAATGCTGA+AGG + chr7_1:73430516-73430535 Msa1036940:CDS 40.0%
AAGGACAAAATCAAGGAGGA+GGG + chr7_1:73430535-73430554 Msa1036940:CDS 40.0%
CTGACAATACTATGAACACG+AGG - chr7_1:73430646-73430665 None:intergenic 40.0%
CAGTAGGATGATGATCAATG+AGG + chr7_1:73430663-73430682 Msa1036940:CDS 40.0%
CTGAAAATAATGCACCCAGT+TGG - chr7_1:73430712-73430731 None:intergenic 40.0%
CTCTTTCATTACTCTCTGCA+AGG - chr7_1:73430795-73430814 None:intergenic 40.0%
ATGAAAGAGCTACAGAAGCA+AGG + chr7_1:73430806-73430825 Msa1036940:CDS 40.0%
TCCTATTCTCAAACAAGGCA+AGG + chr7_1:73430943-73430962 Msa1036940:CDS 40.0%
!! CTTCGTGTTAGTTTGTTGTG+TGG + chr7_1:73431393-73431412 Msa1036940:three_prime_UTR 40.0%
CGTATTCCGATGAAGAGAAG+AGG - chr7_1:73427165-73427184 None:intergenic 45.0%
! GGTGGGACTCATCTTCTTTT+TGG - chr7_1:73427750-73427769 None:intergenic 45.0%
!! TTGAAGGCTTTGGCATTGGT+GGG - chr7_1:73427767-73427786 None:intergenic 45.0%
! AGAGTTGAAGGCTTTGGCAT+TGG - chr7_1:73427771-73427790 None:intergenic 45.0%
! ATCCTTTTCCTCCTCAGTCT+CGG - chr7_1:73427861-73427880 None:intergenic 45.0%
ACGAGGACTCTGACCAATAT+GGG + chr7_1:73427888-73427907 Msa1036940:CDS 45.0%
CATCATCATCGGACCCATAT+TGG - chr7_1:73427904-73427923 None:intergenic 45.0%
! TCAAAGAGATTCTGGAAGCC+AGG + chr7_1:73428125-73428144 Msa1036940:CDS 45.0%
! CAAAGAGATTCTGGAAGCCA+GGG + chr7_1:73428126-73428145 Msa1036940:CDS 45.0%
! AAAGAGATTCTGGAAGCCAG+GGG + chr7_1:73428127-73428146 Msa1036940:CDS 45.0%
AGAATTTGCAGCTTCTGAGC+AGG - chr7_1:73428220-73428239 None:intergenic 45.0%
! GCTGCAAATTCTTTTCAGCG+TGG + chr7_1:73428228-73428247 Msa1036940:CDS 45.0%
GCCATATGCCCATAAATGTG+TGG + chr7_1:73428287-73428306 Msa1036940:CDS 45.0%
AAAGTGCGTGCAGAATATGC+TGG + chr7_1:73428312-73428331 Msa1036940:CDS 45.0%
CGTGCAGCACCCAAATATAA+AGG + chr7_1:73428351-73428370 Msa1036940:CDS 45.0%
TGTTCTTGCACAGAATGTCC+AGG + chr7_1:73428564-73428583 Msa1036940:CDS 45.0%
! TTCCAAGGTGGCCTTGAAAA+GGG + chr7_1:73428621-73428640 Msa1036940:CDS 45.0%
ATGACGGTAGATGGAGATAC+TGG + chr7_1:73428703-73428722 Msa1036940:CDS 45.0%
TGGGGTAACAACAAATGGAG+CGG - chr7_1:73428758-73428777 None:intergenic 45.0%
!! AGCTCTGGGGTAACAACAAA+TGG - chr7_1:73428763-73428782 None:intergenic 45.0%
! CAGGACCTTAATGGATGTGT+TGG + chr7_1:73428816-73428835 Msa1036940:CDS 45.0%
AACAGGGCTATGTCACAGTT+AGG + chr7_1:73429009-73429028 Msa1036940:CDS 45.0%
! GGTCTATGTGCTTTTCGTGT+TGG + chr7_1:73429030-73429049 Msa1036940:CDS 45.0%
GTAAAAGAACTGCTTGCCCA+AGG + chr7_1:73429105-73429124 Msa1036940:CDS 45.0%
ACGGTTCTGTGAAACTCCTT+GGG - chr7_1:73429124-73429143 None:intergenic 45.0%
AACGGTTCTGTGAAACTCCT+TGG - chr7_1:73429125-73429144 None:intergenic 45.0%
TTGGGATTGAGTACCTGTTC+TGG - chr7_1:73429162-73429181 None:intergenic 45.0%
! TGTGCTCTGGATTGCAGTTT+AGG + chr7_1:73429370-73429389 Msa1036940:intron 45.0%
! AGGTTCGAACCCCAAGTTTT+TGG + chr7_1:73429972-73429991 Msa1036940:intron 45.0%
!! GAACCCCAAGTTTTTGGACT+AGG + chr7_1:73429978-73429997 Msa1036940:intron 45.0%
! CAAGAAACTGACTCAGTGGA+TGG - chr7_1:73430108-73430127 None:intergenic 45.0%
! GCTACAAGAAACTGACTCAG+TGG - chr7_1:73430112-73430131 None:intergenic 45.0%
TCAGTTTCTTGTAGCTGCCT+TGG + chr7_1:73430117-73430136 Msa1036940:intron 45.0%
TCTTACATCTGCTATGCTGC+TGG + chr7_1:73430267-73430286 Msa1036940:CDS 45.0%
! TGAACATTGGCTGCCATGTT+GGG - chr7_1:73430298-73430317 None:intergenic 45.0%
! ATGAACATTGGCTGCCATGT+TGG - chr7_1:73430299-73430318 None:intergenic 45.0%
TCTCACTGACCTCAAGTAAG+CGG - chr7_1:73430357-73430376 None:intergenic 45.0%
ACATGATCCCTGACAGTTTC+AGG - chr7_1:73430400-73430419 None:intergenic 45.0%
ATCATGTTATGGCTGCCACA+AGG + chr7_1:73430413-73430432 Msa1036940:CDS 45.0%
TCATGTTATGGCTGCCACAA+GGG + chr7_1:73430414-73430433 Msa1036940:CDS 45.0%
GCTGAAGGACAAAATCAAGG+AGG + chr7_1:73430531-73430550 Msa1036940:CDS 45.0%
GAAGGACAAAATCAAGGAGG+AGG + chr7_1:73430534-73430553 Msa1036940:CDS 45.0%
AGGACAAAATCAAGGAGGAG+GGG + chr7_1:73430536-73430555 Msa1036940:CDS 45.0%
AGAGCTACAGAAGCAAGGTT+AGG + chr7_1:73430811-73430830 Msa1036940:CDS 45.0%
!! GCCTTGCCTTGTTTGAGAAT+AGG - chr7_1:73430947-73430966 None:intergenic 45.0%
GCATTATCGTTCAGTCAAGC+AGG + chr7_1:73430997-73431016 Msa1036940:CDS 45.0%
TTATCGTTCAGTCAAGCAGG+TGG + chr7_1:73431000-73431019 Msa1036940:CDS 45.0%
TATCGTTCAGTCAAGCAGGT+GGG + chr7_1:73431001-73431020 Msa1036940:CDS 45.0%
AGAATTCAGGGAGGACTCAA+GGG + chr7_1:73431070-73431089 Msa1036940:CDS 45.0%
TCAAGGGGGTTCAACATTGA+GGG + chr7_1:73431086-73431105 Msa1036940:CDS 45.0%
CAGAACAAACATTGGGAGCT+GGG - chr7_1:73431302-73431321 None:intergenic 45.0%
TCAGAACAAACATTGGGAGC+TGG - chr7_1:73431303-73431322 None:intergenic 45.0%
!!! TTTTTAAAATTATTATACAA+CGG + chr7_1:73429615-73429634 Msa1036940:intron 5.0%
!! AAGAAATTAAAAAAAAAAAA+CGG - chr7_1:73429870-73429889 None:intergenic 5.0%
GCGCTCCTATTCGATTCAGT+GGG - chr7_1:73427125-73427144 None:intergenic 50.0%
AGCGCTCCTATTCGATTCAG+TGG - chr7_1:73427126-73427145 None:intergenic 50.0%
! TCAACGGGTTCAGTATCGCT+AGG - chr7_1:73427401-73427420 None:intergenic 50.0%
GCTTGAAGATTTCCTCGCTC+AGG + chr7_1:73427706-73427725 Msa1036940:CDS 50.0%
TATTAGCAGAAGCCTGAGCG+AGG - chr7_1:73427721-73427740 None:intergenic 50.0%
CGCTCAGGCTTCTGCTAATA+AGG + chr7_1:73427721-73427740 Msa1036940:CDS 50.0%
! GTTGAAGGCTTTGGCATTGG+TGG - chr7_1:73427768-73427787 None:intergenic 50.0%
! TCCTTTTCCTCCTCAGTCTC+GGG - chr7_1:73427860-73427879 None:intergenic 50.0%
GGAAAAGGATGAAGACGACG+AGG + chr7_1:73427871-73427890 Msa1036940:CDS 50.0%
GACGAGGACTCTGACCAATA+TGG + chr7_1:73427887-73427906 Msa1036940:CDS 50.0%
ACCTGATCAGCTTAGGAAGC+CGG + chr7_1:73427937-73427956 Msa1036940:CDS 50.0%
!! GAACTTGGTAATGACAGGCC+TGG + chr7_1:73427986-73428005 Msa1036940:CDS 50.0%
!! ATGATGATGGCGATGCTCCA+TGG + chr7_1:73428011-73428030 Msa1036940:CDS 50.0%
!! TGATGATGGCGATGCTCCAT+GGG + chr7_1:73428012-73428031 Msa1036940:CDS 50.0%
GTGTCCCATGTGATCTCACT+AGG - chr7_1:73428091-73428110 None:intergenic 50.0%
GGGAACTGGAAGGTTTGAAC+AGG + chr7_1:73428156-73428175 Msa1036940:CDS 50.0%
GATGTTAATCCAGGCCTCAG+TGG + chr7_1:73428265-73428284 Msa1036940:CDS 50.0%
TTATGGGCATATGGCCACTG+AGG - chr7_1:73428282-73428301 None:intergenic 50.0%
!! ATGACGGACCCATTCATGTC+TGG + chr7_1:73428425-73428444 Msa1036940:CDS 50.0%
! TGACGGACCCATTCATGTCT+GGG + chr7_1:73428426-73428445 Msa1036940:CDS 50.0%
! CTTCCAAGGTGGCCTTGAAA+AGG + chr7_1:73428620-73428639 Msa1036940:CDS 50.0%
!! AACCCTTTTCAAGGCCACCT+TGG - chr7_1:73428626-73428645 None:intergenic 50.0%
! TTGGCTGAGATGACGGTAGA+TGG + chr7_1:73428694-73428713 Msa1036940:CDS 50.0%
GGTAGATGGAGATACTGGAG+AGG + chr7_1:73428708-73428727 Msa1036940:CDS 50.0%
AGATGGAGATACTGGAGAGG+AGG + chr7_1:73428711-73428730 Msa1036940:CDS 50.0%
!! TTACCCCAGAGCTTGTTGCA+CGG + chr7_1:73428770-73428789 Msa1036940:CDS 50.0%
TTTCCGTGCAACAAGCTCTG+GGG - chr7_1:73428776-73428795 None:intergenic 50.0%
GTTTCCGTGCAACAAGCTCT+GGG - chr7_1:73428777-73428796 None:intergenic 50.0%
! CTGCTATTCTCTGGGAAGGT+GGG - chr7_1:73428799-73428818 None:intergenic 50.0%
! ATGTGCTTTTCGTGTTGGGC+TGG + chr7_1:73429035-73429054 Msa1036940:CDS 50.0%
GAATTTCCGCCGCTTACTTG+AGG + chr7_1:73430345-73430364 Msa1036940:CDS 50.0%
TGATCCCTGACAGTTTCAGG+AGG - chr7_1:73430397-73430416 None:intergenic 50.0%
AAATCAAGGAGGAGGGGCTT+AGG + chr7_1:73430542-73430561 Msa1036940:CDS 50.0%
ATGAGGAGCTTCATGCAAGC+TGG + chr7_1:73430680-73430699 Msa1036940:CDS 50.0%
TGAGGAGCTTCATGCAAGCT+GGG + chr7_1:73430681-73430700 Msa1036940:CDS 50.0%
! TGTTGAACTCTCAAGGGTGC+AGG + chr7_1:73430735-73430754 Msa1036940:CDS 50.0%
GCTACAGAAGCAAGGTTAGG+CGG + chr7_1:73430814-73430833 Msa1036940:CDS 50.0%
TCTCAAACAAGGCAAGGCAG+TGG + chr7_1:73430949-73430968 Msa1036940:CDS 50.0%
! CTATTCTAGAGGACGGGGAA+CGG + chr7_1:73431032-73431051 Msa1036940:CDS 50.0%
! TATTCTAGAGGACGGGGAAC+GGG + chr7_1:73431033-73431052 Msa1036940:CDS 50.0%
GAGGCGGCTATCAGAATTCA+GGG + chr7_1:73431058-73431077 Msa1036940:CDS 50.0%
CAGAATTCAGGGAGGACTCA+AGG + chr7_1:73431069-73431088 Msa1036940:CDS 50.0%
GAATTCAGGGAGGACTCAAG+GGG + chr7_1:73431071-73431090 Msa1036940:CDS 50.0%
AATTCAGGGAGGACTCAAGG+GGG + chr7_1:73431072-73431091 Msa1036940:CDS 50.0%
CTCAAGGGGGTTCAACATTG+AGG + chr7_1:73431085-73431104 Msa1036940:CDS 50.0%
CAAGGGGGTTCAACATTGAG+GGG + chr7_1:73431087-73431106 Msa1036940:CDS 50.0%
!! CGGGTAGAAGTATCTACGTG+GGG - chr7_1:73431114-73431133 None:intergenic 50.0%
!! GCGGGTAGAAGTATCTACGT+GGG - chr7_1:73431115-73431134 None:intergenic 50.0%
!! TGCGGGTAGAAGTATCTACG+TGG - chr7_1:73431116-73431135 None:intergenic 50.0%
CGTAGATACTTCTACCCGCA+TGG + chr7_1:73431116-73431135 Msa1036940:CDS 50.0%
!! TACCCGCATGGTTAGCCTTA+GGG + chr7_1:73431128-73431147 Msa1036940:CDS 50.0%
GGCTTCGAAATTCTGGACCC+AGG + chr7_1:73427240-73427259 Msa1036940:CDS 55.0%
TCCCGAGACTGAGGAGGAAA+AGG + chr7_1:73427856-73427875 Msa1036940:CDS 55.0%
TCCGGCTTCCTAAGCTGATC+AGG - chr7_1:73427941-73427960 None:intergenic 55.0%
TCAGAATCCGATACGGGCTC+CGG - chr7_1:73427959-73427978 None:intergenic 55.0%
! GACAGGCCTGGTGATGATGA+TGG + chr7_1:73427998-73428017 Msa1036940:CDS 55.0%
GCATCGCCATCATCATCACC+AGG - chr7_1:73428007-73428026 None:intergenic 55.0%
! AGATTCTGGAAGCCAGGGGA+AGG + chr7_1:73428131-73428150 Msa1036940:CDS 55.0%
GACGGACCCATTCATGTCTG+GGG + chr7_1:73428427-73428446 Msa1036940:CDS 55.0%
TACTGGAGAGGAGGTGAGTG+AGG + chr7_1:73428720-73428739 Msa1036940:CDS 55.0%
GGTTTCCGTGCAACAAGCTC+TGG - chr7_1:73428778-73428797 None:intergenic 55.0%
! CCTGCTATTCTCTGGGAAGG+TGG - chr7_1:73428800-73428819 None:intergenic 55.0%
CCACCTTCCCAGAGAATAGC+AGG + chr7_1:73428797-73428816 Msa1036940:CDS 55.0%
! GGTCCTGCTATTCTCTGGGA+AGG - chr7_1:73428803-73428822 None:intergenic 55.0%
!! GGGCTGGTTTCTGAAGCACA+TGG + chr7_1:73429051-73429070 Msa1036940:CDS 55.0%
GCTGCTGGAAGTTCCCAACA+TGG + chr7_1:73430282-73430301 Msa1036940:CDS 55.0%
CACTGACCTCAAGTAAGCGG+CGG - chr7_1:73430354-73430373 None:intergenic 55.0%
CCTGACAGTTTCAGGAGGAC+CGG - chr7_1:73430392-73430411 None:intergenic 55.0%
CGGTCCTCCTGAAACTGTCA+GGG + chr7_1:73430390-73430409 Msa1036940:CDS 55.0%
CAAGCTGGGATCAGCCAACT+GGG + chr7_1:73430695-73430714 Msa1036940:CDS 55.0%
! ACTCTCAAGGGTGCAGGCTT+TGG + chr7_1:73430741-73430760 Msa1036940:CDS 55.0%
ACAGAAGCAAGGTTAGGCGG+CGG + chr7_1:73430817-73430836 Msa1036940:CDS 55.0%
GGTTGGATCTGCCTCCAAGA+CGG + chr7_1:73430842-73430861 Msa1036940:CDS 55.0%
TGCCTCCAAGACGGAGAGAT+GGG + chr7_1:73430851-73430870 Msa1036940:CDS 55.0%
!! GGTGGTAGTGGAACGTCTTC+AGG + chr7_1:73430901-73430920 Msa1036940:CDS 55.0%
!! GGTAGTGGAACGTCTTCAGG+TGG + chr7_1:73430904-73430923 Msa1036940:CDS 55.0%
GGCAGTGGACGTACAGGATA+CGG + chr7_1:73430964-73430983 Msa1036940:CDS 55.0%
AGTGGACGTACAGGATACGG+TGG + chr7_1:73430967-73430986 Msa1036940:CDS 55.0%
TTCAGTCAAGCAGGTGGGAG+TGG + chr7_1:73431006-73431025 Msa1036940:CDS 55.0%
! GTGGCGGCTATTCTAGAGGA+CGG + chr7_1:73431025-73431044 Msa1036940:CDS 55.0%
! TGGCGGCTATTCTAGAGGAC+GGG + chr7_1:73431026-73431045 Msa1036940:CDS 55.0%
GGAGGCGGCTATCAGAATTC+AGG + chr7_1:73431057-73431076 Msa1036940:CDS 55.0%
GCGGCTATCAGAATTCAGGG+AGG + chr7_1:73431061-73431080 Msa1036940:CDS 55.0%
!! CTACCCGCATGGTTAGCCTT+AGG + chr7_1:73431127-73431146 Msa1036940:CDS 55.0%
!! ACCCGCATGGTTAGCCTTAG+GGG + chr7_1:73431129-73431148 Msa1036940:CDS 55.0%
TCCCCTAAGGCTAACCATGC+GGG - chr7_1:73431133-73431152 None:intergenic 55.0%
CTCCCCTAAGGCTAACCATG+CGG - chr7_1:73431134-73431153 None:intergenic 55.0%
GTCAAGCACGAACTCCCCTA+AGG - chr7_1:73431146-73431165 None:intergenic 55.0%
CCATCATCGTCGTCGCTGTC+AGG - chr7_1:73427482-73427501 None:intergenic 60.0%
CCTGACAGCGACGACGATGA+TGG + chr7_1:73427479-73427498 Msa1036940:CDS 60.0%
TAGGAAGCCGGAGCCCGTAT+CGG + chr7_1:73427949-73427968 Msa1036940:CDS 60.0%
TCTGGAAGCCAGGGGAAGGA+AGG + chr7_1:73428135-73428154 Msa1036940:CDS 60.0%
CTGGAAGCCAGGGGAAGGAA+GGG + chr7_1:73428136-73428155 Msa1036940:CDS 60.0%
TCCAGTTCCCTTCCTTCCCC+TGG - chr7_1:73428146-73428165 None:intergenic 60.0%
GGGGAAGGAAGGGAACTGGA+AGG + chr7_1:73428146-73428165 Msa1036940:CDS 60.0%
CCGGTCCTCCTGAAACTGTC+AGG + chr7_1:73430389-73430408 Msa1036940:CDS 60.0%
GCAAGCTGGGATCAGCCAAC+TGG + chr7_1:73430694-73430713 Msa1036940:CDS 60.0%
AAGCAAGGTTAGGCGGCGGT+GGG + chr7_1:73430821-73430840 Msa1036940:CDS 60.0%
CTGCCTCCAAGACGGAGAGA+TGG + chr7_1:73430850-73430869 Msa1036940:CDS 60.0%
TGCCCATCTCTCCGTCTTGG+AGG - chr7_1:73430856-73430875 None:intergenic 60.0%
TCCAAGACGGAGAGATGGGC+AGG + chr7_1:73430855-73430874 Msa1036940:CDS 60.0%
TCCTGCCCATCTCTCCGTCT+TGG - chr7_1:73430859-73430878 None:intergenic 60.0%
GATTATGCCGCTGCAGCTGC+TGG + chr7_1:73430877-73430896 Msa1036940:CDS 60.0%
GTGGAACGTCTTCAGGTGGC+AGG + chr7_1:73430908-73430927 Msa1036940:CDS 60.0%
GAACGTCTTCAGGTGGCAGG+TGG + chr7_1:73430911-73430930 Msa1036940:CDS 60.0%
AGGCAAGGCAGTGGACGTAC+AGG + chr7_1:73430958-73430977 Msa1036940:CDS 60.0%
GGACGTACAGGATACGGTGG+AGG + chr7_1:73430970-73430989 Msa1036940:CDS 60.0%
AGTCAAGCAGGTGGGAGTGG+CGG + chr7_1:73431009-73431028 Msa1036940:CDS 60.0%
GGGAGTGGCGGCTATTCTAG+AGG + chr7_1:73431021-73431040 Msa1036940:CDS 60.0%
! GGCGGCTATTCTAGAGGACG+GGG + chr7_1:73431027-73431046 Msa1036940:CDS 60.0%
CAAACATTGGGAGCTGGGCG+AGG - chr7_1:73431297-73431316 None:intergenic 60.0%
CAGGGAGAGTCCCGAGACTG+AGG + chr7_1:73427847-73427866 Msa1036940:CDS 65.0%
GGAGAGTCCCGAGACTGAGG+AGG + chr7_1:73427850-73427869 Msa1036940:CDS 65.0%
GCCAGGGGAAGGAAGGGAAC+TGG + chr7_1:73428142-73428161 Msa1036940:CDS 65.0%
GGCATATGGCCACTGAGGCC+TGG - chr7_1:73428277-73428296 None:intergenic 65.0%
GAAGCAAGGTTAGGCGGCGG+TGG + chr7_1:73430820-73430839 Msa1036940:CDS 65.0%
AAGGTTAGGCGGCGGTGGGT+TGG + chr7_1:73430825-73430844 Msa1036940:CDS 65.0%
TATGCCGCTGCAGCTGCTGG+CGG + chr7_1:73430880-73430899 Msa1036940:CDS 65.0%
TCTAGAGGACGGGGAACGGG+TGG + chr7_1:73431036-73431055 Msa1036940:CDS 65.0%
CATTGGGAGCTGGGCGAGGA+GGG - chr7_1:73431293-73431312 None:intergenic 65.0%
ACATTGGGAGCTGGGCGAGG+AGG - chr7_1:73431294-73431313 None:intergenic 65.0%
ACCACCGCCAGCAGCTGCAG+CGG - chr7_1:73430887-73430906 None:intergenic 70.0%
GCAGCTGCTGGCGGTGGTAG+TGG + chr7_1:73430889-73430908 Msa1036940:CDS 70.0%
AGAGGACGGGGAACGGGTGG+AGG + chr7_1:73431039-73431058 Msa1036940:CDS 70.0%
GGACGGGGAACGGGTGGAGG+CGG + chr7_1:73431042-73431061 Msa1036940:CDS 75.0%
! GCCGCTGCAGCTGCTGGCGG+TGG + chr7_1:73430883-73430902 Msa1036940:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 73427122 73431455 73427122 ID=Msa1036940;Name=Msa1036940
chr7_1 mRNA 73427122 73431455 73427122 ID=Msa1036940-mRNA-1;Parent=Msa1036940;Name=Msa1036940-mRNA-1;_AED=0.27;_eAED=0.27;_QI=116|1|1|1|1|1|3|291|935
chr7_1 exon 73427122 73427261 73427122 ID=Msa1036940-mRNA-1:exon:18065;Parent=Msa1036940-mRNA-1
chr7_1 exon 73427353 73429167 73427353 ID=Msa1036940-mRNA-1:exon:18066;Parent=Msa1036940-mRNA-1
chr7_1 exon 73430196 73431455 73430196 ID=Msa1036940-mRNA-1:exon:18067;Parent=Msa1036940-mRNA-1
chr7_1 five_prime_UTR 73427122 73427237 73427122 ID=Msa1036940-mRNA-1:five_prime_utr;Parent=Msa1036940-mRNA-1
chr7_1 CDS 73427238 73427261 73427238 ID=Msa1036940-mRNA-1:cds;Parent=Msa1036940-mRNA-1
chr7_1 CDS 73427353 73429167 73427353 ID=Msa1036940-mRNA-1:cds;Parent=Msa1036940-mRNA-1
chr7_1 CDS 73430196 73431164 73430196 ID=Msa1036940-mRNA-1:cds;Parent=Msa1036940-mRNA-1
chr7_1 three_prime_UTR 73431165 73431455 73431165 ID=Msa1036940-mRNA-1:three_prime_utr;Parent=Msa1036940-mRNA-1
Gene Sequence

>Msa1036940

ATGGCTTCGAAATTCTGGACCCAGGGTAATAGCGATACTGACGATGACGAACCCACTGATAATGATGAACCTAGCGATACTGAACCCGTTGATGAACAACCCAAGAACAATACAACCAATAGTAACAGATACTATGCTTATGTCACTACACCTGACAGCGACGACGATGATGGCCAAAAGCGTGTTGTTAAGTCTGCTAAAGATAAGCGTTTTGATGAGATGGCTTCCACTGTTGATCAGATCAAGAATGCTATCAAGATCAATGACTGGGTCAGCTTGCAAGAGAGCTTCGACAAGATCAACAAACAGCTTGACAAAGTTATGCGGGTTATCGAGTCCCAAAAGATCCCTAATCTCTACATCAAGGCTCTTGTAATGCTTGAAGATTTCCTCGCTCAGGCTTCTGCTAATAAGGATGCCAAAAAGAAGATGAGTCCCACCAATGCCAAAGCCTTCAACTCTATGAAGCAGAAATTGAAGAAGAACAATAAGCAATACGAGGACTTTATTATCAAATGCAGGGAGAGTCCCGAGACTGAGGAGGAAAAGGATGAAGACGACGAGGACTCTGACCAATATGGGTCCGATGATGATGATGAGATCATTGAACCTGATCAGCTTAGGAAGCCGGAGCCCGTATCGGATTCTGAAACTTCTGAACTTGGTAATGACAGGCCTGGTGATGATGATGGCGATGCTCCATGGGATCAAAAGCTTAGCAAGAAAGACAGGCTTTTGGAGAAAATGTTCATGAAAAAGCCTAGTGAGATCACATGGGACACTGTTAACAAGAAGTTCAAAGAGATTCTGGAAGCCAGGGGAAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAGCTTACCTTCCTAACAAAAGTTGCTAAAACACCTGCTCAGAAGCTGCAAATTCTTTTCAGCGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAGTGGCCATATGCCCATAAATGTGTGGAAAAAGTGCGTGCAGAATATGCTGGTCATTCTTGATATTCTCGTGCAGCACCCAAATATAAAGGTTGATGATTCTGTGGAACTAGATGAAAATGAAACTAAGAAAGGGGATGACTATGACGGACCCATTCATGTCTGGGGTAACTTAGTTGCTTTCTTAGAAAAAATAGATGCCGAGTTTTTCAAGAGCTTGCAGTGCATTGATCCCCACACACGTGAATATGTTGAGAGACTCAGGGATGAGCCTCTGTTTGTTGTTCTTGCACAGAATGTCCAGGAATATCTTGAAAGCATTGGAGATTTCAAAGCTTCTTCCAAGGTGGCCTTGAAAAGGGTTGAACTCATTTACTACAAACCACATGAGGTTTATGAAGCAACGAGAAAATTGGCTGAGATGACGGTAGATGGAGATACTGGAGAGGAGGTGAGTGAGGATACAAGATTCACCGCTCCATTTGTTGTTACCCCAGAGCTTGTTGCACGGAAACCCACCTTCCCAGAGAATAGCAGGACCTTAATGGATGTGTTGGTATCACTAATATACAAATACGGAGATGAGCGCACTAAAGCACGCGCAATGCTTTGTGATATATATCACCATGCTCTTCTAGATGAGTTTGCAGTTGCCCGTGATCTGTTGCTTATGAGTCATTTGCAAGAAAATGTTCACCACATGGACATTTCAACACAGATACTTTTTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGTGTTGGGCTGGTTTCTGAAGCACATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTAAAAGAACTGCTTGCCCAAGGAGTTTCACAGAACCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAAGTTCCCAACATGGCAGCCAATGTTCATGATGCTAAGCGTAAGATCATCAGTAAGAATTTCCGCCGCTTACTTGAGGTCAGTGAGAAACAAACATTCACCGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGAGATTTCCAGAAGGCCTTTGACATTATTGCATCTCTTGAGGTGTGGAAATTTGTGAAAAATCGTGACACCGTTCTAAAAATGCTGAAGGACAAAATCAAGGAGGAGGGGCTTAGGACATACCTATTCACCTTCTCTTCATCATATGATTCTTTGAGTGTGGATCAGCTCACAAATTTTTTCGATCTCTCTCTTCCTCGTGTTCATAGTATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGATCAGCCAACTGGGTGCATTATTTTCAGAAATGTTGAACTCTCAAGGGTGCAGGCTTTGGCATTCCAGTTGACTGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGCGGTGGGTTGGATCTGCCTCCAAGACGGAGAGATGGGCAGGATTATGCCGCTGCAGCTGCTGGCGGTGGTAGTGGAACGTCTTCAGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGGCAAGGCAGTGGACGTACAGGATACGGTGGAGGAAGAGCATTATCGTTCAGTCAAGCAGGTGGGAGTGGCGGCTATTCTAGAGGACGGGGAACGGGTGGAGGCGGCTATCAGAATTCAGGGAGGACTCAAGGGGGTTCAACATTGAGGGGACCCCACGTAGATACTTCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTGA
Protein sequence

>Msa1036940

MASKFWTQGNSDTDDDEPTDNDEPSDTEPVDEQPKNNTTNSNRYYAYVTTPDSDDDDGQKRVVKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLDKVMRVIESQKIPNLYIKALVMLEDFLAQASANKDAKKKMSPTNAKAFNSMKQKLKKNNKQYEDFIIKCRESPETEEEKDEDDEDSDQYGSDDDDEIIEPDQLRKPEPVSDSETSELGNDRPGDDDGDAPWDQKLSKKDRLLEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDDYDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPLFVVLAQNVQEYLESIGDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVDGDTGEEVSEDTRFTAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQNRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLEVWKFVKNRDTVLKMLKDKIKEEGLRTYLFTFSSSYDSLSVDQLTNFFDLSLPRVHSIVSRMMINEELHASWDQPTGCIIFRNVELSRVQALAFQLTEKLSILAESNERATEARLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFSQAGGSGGYSRGRGTGGGGYQNSGRTQGGSTLRGPHVDTSTRMVSLRGVRA*