AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040430 MtrunA17_Chr7g0271021 92.432 1295 7 3 1 1247 1 1252 0.0 2446
Msa1040430 MtrunA17_Chr1g0193511 78.797 1297 178 5 4 1247 3 1255 0.0 2073
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040430 AT3G62010.1 70.901 1299 276 8 4 1247 3 1254 0.0 1856
Msa1040430 AT3G62010.2 70.988 1296 277 8 4 1247 3 1251 0.0 1853

Find 310 sgRNAs with CRISPR-Local

Find 773 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCAAAACAGAACCGTTTC+TGG 0.135245 7_1:-77823287 None:intergenic
TCTCCGGCAAACTCGGATTT+TGG 0.181180 7_1:-77820630 None:intergenic
GCGTTCTGACTTTGACATTT+TGG 0.223308 7_1:+77822341 Msa1040430:CDS
TATCTTCATTTGTGAAATAT+TGG 0.234441 7_1:-77822712 None:intergenic
AGAACAAACAACAAGTTCTT+TGG 0.237948 7_1:+77816196 Msa1040430:CDS
TGCCAGAAACGGTTCTGTTT+TGG 0.239277 7_1:+77823285 Msa1040430:CDS
ACCATGTATTTGTATATTAT+TGG 0.244241 7_1:-77823356 None:intergenic
GTAAAACTTCGCGTGGATTT+TGG 0.246060 7_1:+77822588 Msa1040430:CDS
TACTCAATCAGGGAATTAAT+AGG 0.250230 7_1:+77816967 Msa1040430:intron
TGGGAGACCTGTTAGGTATT+AGG 0.253560 7_1:+77826762 Msa1040430:three_prime_UTR
CTTAAAATGTATTTCTTTCC+TGG 0.259203 7_1:+77823322 Msa1040430:CDS
AATCAGCTTGTGTACATTAA+TGG 0.261703 7_1:+77816319 Msa1040430:intron
GCTGACTCTTTGCATGTTCA+TGG 0.266496 7_1:+77816114 Msa1040430:CDS
GGGTACACGTGCATACTTAA+TGG 0.275449 7_1:-77822295 None:intergenic
AACCGCCATTTGATTCTTCT+TGG 0.284932 7_1:-77822644 None:intergenic
CTACCCATAGAATTGCTTCT+TGG 0.285979 7_1:-77818852 None:intergenic
GGGGCTTTGTGTACAAAATA+AGG 0.287579 7_1:-77826533 None:intergenic
CCAAACCTTGAATGTCATTC+TGG 0.287733 7_1:-77823048 None:intergenic
GTCAACATCTGATTTGCTTT+GGG 0.298755 7_1:-77825233 None:intergenic
AGTCTACTGTGGTTGGATAC+TGG 0.302142 7_1:+77824416 Msa1040430:CDS
ACCAAGTCTAATACAGATTA+TGG 0.305027 7_1:-77825047 None:intergenic
GAGTCAGCACGACGATAATT+AGG 0.307384 7_1:-77816099 None:intergenic
GATTCCAAGAAGCAATTCTA+TGG 0.317282 7_1:+77818848 Msa1040430:CDS
TGTTTCATGAATAACCATTA+TGG 0.319531 7_1:-77822175 None:intergenic
TCTATCAATAACAGCATCTA+AGG 0.323753 7_1:-77822829 None:intergenic
CCAGAATGACATTCAAGGTT+TGG 0.324243 7_1:+77823048 Msa1040430:CDS
TAAATGACATTCTCTTGTTA+TGG 0.325092 7_1:+77822763 Msa1040430:CDS
ACTTCTGATCACATACAGTA+TGG 0.326177 7_1:-77826627 None:intergenic
AAAGAACTTGTTGTTTGTTC+TGG 0.331372 7_1:-77816194 None:intergenic
TTGAGAAAAGGCGAAGTTCT+TGG 0.332173 7_1:+77820568 Msa1040430:CDS
TCAAGTGGAGATGAAGCTTT+AGG 0.332476 7_1:+77822669 Msa1040430:CDS
ATGGCAACTCCAACCATCTC+TGG 0.338223 7_1:+77824021 Msa1040430:CDS
TTTGTATCGCACACAGGTTT+TGG 0.338626 7_1:+77825004 Msa1040430:CDS
ATAACCACATTATTTGATAA+TGG 0.339953 7_1:+77822789 Msa1040430:CDS
GGCATCTCTCTCTCTTGTTA+AGG 0.346446 7_1:-77824530 None:intergenic
TGTCAACATCTGATTTGCTT+TGG 0.347410 7_1:-77825234 None:intergenic
CTCATATTATGCCAAAGTAT+TGG 0.354511 7_1:-77820775 None:intergenic
CTGTGAAAGAGTGGAGAAAA+TGG 0.356262 7_1:+77822101 Msa1040430:CDS
GAGCCTGTTATTTACATCAA+TGG 0.358162 7_1:+77820802 Msa1040430:CDS
TCATATTATGCCAAAGTATT+GGG 0.362611 7_1:-77820774 None:intergenic
CAGAATTTGCGTGAAGCAAT+TGG 0.375228 7_1:+77819282 Msa1040430:intron
CGCATTCTCATCACTTCCTC+TGG 0.378709 7_1:-77815982 None:intergenic
TTGGTCTACCTCAATCGAAT+TGG 0.381899 7_1:+77817905 Msa1040430:CDS
TCAGTCACTGCATATGTATC+AGG 0.387017 7_1:-77825115 None:intergenic
GTAGCGAGTTGTTACACTTA+GGG 0.390788 7_1:-77826553 None:intergenic
GTATTCGGTCCGTCATTCAT+AGG 0.394726 7_1:+77820728 Msa1040430:CDS
TCAGCTATCTTTGTTAAAGA+TGG 0.395535 7_1:-77820502 None:intergenic
CATAGGATTTGCAGTACTAA+TGG 0.396378 7_1:+77820745 Msa1040430:CDS
ACAATATAGCAGTGCCATAA+TGG 0.396726 7_1:+77822161 Msa1040430:CDS
TGGATACTGGGAAAACATTC+TGG 0.397535 7_1:+77824429 Msa1040430:CDS
TTGCTTTATTGTAGCTCTGC+AGG 0.397835 7_1:+77824971 Msa1040430:intron
ATTCTCCAACCTCGAGTATA+CGG 0.397990 7_1:+77816375 Msa1040430:CDS
ATCCAACCATTGATGGTATT+CGG 0.398831 7_1:+77820713 Msa1040430:CDS
TAGGGAAAGGGTTGAACAAA+TGG 0.398992 7_1:+77816986 Msa1040430:CDS
GGTACACGTGCATACTTAAT+GGG 0.401315 7_1:-77822294 None:intergenic
CAAGGAGATGCTAAACTATC+TGG 0.404951 7_1:+77824047 Msa1040430:CDS
ATATCAAAATCCAGCTCCTT+AGG 0.407648 7_1:-77817419 None:intergenic
GCATCTCTCTCTCTTGTTAA+GGG 0.409096 7_1:-77824529 None:intergenic
TTCCCATTGATGTAAATAAC+AGG 0.410137 7_1:-77820805 None:intergenic
TAGCTTGTAAAGGAAAATAT+TGG 0.411075 7_1:+77826723 Msa1040430:three_prime_UTR
TATTCATTGGGAGACCTGTT+AGG 0.412683 7_1:+77826755 Msa1040430:three_prime_UTR
TTCTGATTCCATCAACGGTT+GGG 0.413483 7_1:-77816146 None:intergenic
AGAAAAGAATAAACTTCTGC+TGG 0.414005 7_1:-77824469 None:intergenic
ACAGCCAGATGAGATGAAAA+AGG 0.417077 7_1:+77819329 Msa1040430:CDS
CAAAGTTGCGATAACCATTC+CGG 0.417239 7_1:-77817885 None:intergenic
TTGGTGGTCAAAGTATTCAT+TGG 0.418139 7_1:+77826742 Msa1040430:three_prime_UTR
AGCCTGTTATTTACATCAAT+GGG 0.419684 7_1:+77820803 Msa1040430:CDS
AAGCTTGGTTCGGGTGTTAG+AGG 0.421022 7_1:+77818959 Msa1040430:CDS
CTTGGAAGCGAAGCATTTGA+TGG 0.423096 7_1:+77823005 Msa1040430:CDS
GTCTACTGTGGTTGGATACT+GGG 0.425539 7_1:+77824417 Msa1040430:CDS
AAAGTACTGCAGCCATCATT+TGG 0.426440 7_1:+77825091 Msa1040430:CDS
GCATCAGAGGCCAGAGGTAC+AGG 0.426590 7_1:+77823073 Msa1040430:CDS
AGATCGTGGTGCTGAGTACT+TGG 0.427096 7_1:+77822947 Msa1040430:CDS
CTCAATCGAATTGGAGCCTC+TGG 0.428353 7_1:+77817914 Msa1040430:CDS
AGTTTCACACATACCTCTAA+TGG 0.428961 7_1:-77817246 None:intergenic
ACTCAATCAGGGAATTAATA+GGG 0.436892 7_1:+77816968 Msa1040430:intron
ATTCTTCAGGGTGGTGTTGA+CGG 0.437867 7_1:+77819051 Msa1040430:intron
CGGAATGGTTATCGCAACTT+TGG 0.438278 7_1:+77817886 Msa1040430:CDS
CATTTCATAGCCTGTACCTC+TGG 0.439109 7_1:-77823083 None:intergenic
GATTAGTCTTCGTGAAGAAC+CGG 0.439857 7_1:+77816218 Msa1040430:CDS
CAGTCATAAGAAGCTTGGTT+CGG 0.440083 7_1:+77818949 Msa1040430:CDS
TTACAAGCTAGATTTCAGTT+TGG 0.441494 7_1:-77826710 None:intergenic
TGTGCAACCTAATACCTAAC+AGG 0.441557 7_1:-77826769 None:intergenic
GGGCGTGGACGAACGACAAC+CGG 0.441720 7_1:+77817866 Msa1040430:CDS
ACCGCCATTTGATTCTTCTT+GGG 0.442587 7_1:-77822643 None:intergenic
TTCTGTGAAGACACCATTAG+AGG 0.445861 7_1:+77817233 Msa1040430:CDS
TGGCAACTCCAACCATCTCT+GGG 0.446991 7_1:+77824022 Msa1040430:CDS
CACTTAGGATGGGCGACTAT+CGG 0.449344 7_1:+77825173 Msa1040430:CDS
ATACGGGTAGAAGAGGTTAT+AGG 0.453049 7_1:-77826501 None:intergenic
TTGAGGGATCATATTCTTCA+CGG 0.453799 7_1:-77824387 None:intergenic
ATCTAAGGCCTCTCGGCATT+CGG 0.454485 7_1:-77822814 None:intergenic
GGAGTTGCCATGCAACATAC+AGG 0.455103 7_1:-77824009 None:intergenic
CTCAAACACGTCGGAATCAC+CGG 0.456878 7_1:+77824195 Msa1040430:CDS
AAATAAGGTATTGTGCAATA+CGG 0.460848 7_1:-77826518 None:intergenic
TGGTGGTCAAAGTATTCATT+GGG 0.461317 7_1:+77826743 Msa1040430:three_prime_UTR
TCAACATCACGCAGAACAAA+TGG 0.461347 7_1:-77816346 None:intergenic
CTTAAAAGCGATCACTGTCC+TGG 0.462074 7_1:+77820604 Msa1040430:CDS
ATGCCAAAATCCGAGTTTGC+CGG 0.464844 7_1:+77820627 Msa1040430:CDS
ACTTAGGATGGGCGACTATC+GGG 0.465233 7_1:+77825174 Msa1040430:CDS
GGTATTAGGTTGCACAGCTA+AGG 0.465565 7_1:+77826776 Msa1040430:three_prime_UTR
ATTGTGTTCCCTTTGTCCAC+AGG 0.466158 7_1:+77824148 Msa1040430:CDS
AAATGATGGCTGCAGTACTT+TGG 0.466499 7_1:-77825089 None:intergenic
ATGCGAGGAGGTTCAGTGCT+TGG 0.467187 7_1:+77816000 Msa1040430:CDS
CGAATTGCCTCCTCTGAGTT+AGG 0.468317 7_1:-77818912 None:intergenic
TGGTCATATATTTGATGCTT+GGG 0.468640 7_1:+77822203 Msa1040430:CDS
CCCGACGATACAGAATTTGC+TGG 0.469535 7_1:+77826350 Msa1040430:CDS
CTGGATGCTAAGTCTAAACC+TGG 0.470746 7_1:+77824066 Msa1040430:CDS
TGCTTTATTGTAGCTCTGCA+GGG 0.475432 7_1:+77824972 Msa1040430:intron
CATCTCCTTGGCCCCAGAGA+TGG 0.476947 7_1:-77824034 None:intergenic
TCCACTCTCTCCGGCAAACT+CGG 0.477207 7_1:-77820637 None:intergenic
TTTAACTCCCTGTGGACAAA+GGG 0.480119 7_1:-77824156 None:intergenic
TCCAACCATCTCTGGGGCCA+AGG 0.480871 7_1:+77824029 Msa1040430:CDS
TCAACTTCACGAAGAACAAA+TGG 0.481101 7_1:-77820829 None:intergenic
GTTGCTATCCCAACCGTTGA+TGG 0.481580 7_1:+77816138 Msa1040430:CDS
ATTAGCAGCTAGAAATGAAA+AGG 0.483050 7_1:-77822502 None:intergenic
TCCGAGTTTGCCGGAGAGAG+TGG 0.483938 7_1:+77820636 Msa1040430:CDS
CTTCATTTGTGAAATATTGG+AGG 0.484391 7_1:-77822709 None:intergenic
AGGCAAATGGTCAGCAGCAT+TGG 0.486939 7_1:-77818892 None:intergenic
TCAAGGTTTGGTTGCATCAG+AGG 0.488417 7_1:+77823060 Msa1040430:CDS
ATGGTGGATGCCCAATACTT+TGG 0.489737 7_1:+77820764 Msa1040430:CDS
CATGTACGAGGACTCTTGTA+AGG 0.490120 7_1:-77825207 None:intergenic
GAAATCCAGAATGACATTCA+AGG 0.491229 7_1:+77823043 Msa1040430:CDS
AGAGATCCAATGGGTGCACT+TGG 0.491762 7_1:+77820463 Msa1040430:CDS
TTGTGTTCCCTTTGTCCACA+GGG 0.493817 7_1:+77824149 Msa1040430:CDS
TACTCCAACATGTTCTTGTA+TGG 0.494690 7_1:-77820856 None:intergenic
TCCTTGGCCCCAGAGATGGT+TGG 0.495356 7_1:-77824030 None:intergenic
GATACGATCTGAATGTGATA+AGG 0.496685 7_1:-77826313 None:intergenic
TCAGGGAATTAATAGGGAAA+GGG 0.497998 7_1:+77816974 Msa1040430:intron
ACGTGTTTGAGTGTATCAAC+AGG 0.498289 7_1:-77824183 None:intergenic
TGGTCCACCATCTGACCATC+GGG 0.499302 7_1:-77817189 None:intergenic
TTATTGGAAGTTCTCTGTCC+AGG 0.500771 7_1:-77823340 None:intergenic
GATGGTGGACCAATGGGAAC+CGG 0.501910 7_1:+77817200 Msa1040430:CDS
CAGATAGTTTAGCATCTCCT+TGG 0.502332 7_1:-77824046 None:intergenic
ATGGTCATATATTTGATGCT+TGG 0.505208 7_1:+77822202 Msa1040430:CDS
TTTCTGATTCCATCAACGGT+TGG 0.505618 7_1:-77816147 None:intergenic
TATCTCATTGATATCACAGA+TGG 0.505728 7_1:+77822524 Msa1040430:CDS
AATAAGGTATTGTGCAATAC+GGG 0.507457 7_1:-77826517 None:intergenic
TTTAATAGATGTGCAGGCGC+AGG 0.507717 7_1:+77825626 Msa1040430:intron
AATGTCAAAGTCAGAACGCT+CGG 0.508936 7_1:-77822337 None:intergenic
TGATGGCCGGCCATCTGAGA+TGG 0.509119 7_1:+77820531 Msa1040430:CDS
CTAAACCTGGGTTCACTGCT+CGG 0.509134 7_1:+77824079 Msa1040430:CDS
GGAATGAGAATACAATCAGT+TGG 0.509466 7_1:-77826816 None:intergenic
TGGTCAGATGGTGGACCAAT+GGG 0.510071 7_1:+77817194 Msa1040430:CDS
AACTGCTTCTTCTCTTACAT+CGG 0.511566 7_1:-77824115 None:intergenic
ATGGTCAGATGGTGGACCAA+TGG 0.511766 7_1:+77817193 Msa1040430:CDS
AACTGAAATCTAGCTTGTAA+AGG 0.512004 7_1:+77826713 Msa1040430:three_prime_UTR
AATGTTGCTGCCTTGAGAAA+AGG 0.512806 7_1:+77820556 Msa1040430:CDS
CTCAGAGGAGGCAATTCGTA+GGG 0.513798 7_1:+77818917 Msa1040430:CDS
TAATATTGCTTCTGCTGCAA+AGG 0.513972 7_1:+77822368 Msa1040430:CDS
TTCAAAAGCTTGGAAGCTGA+AGG 0.514103 7_1:+77822267 Msa1040430:CDS
ATCAGGGAATTAATAGGGAA+AGG 0.514603 7_1:+77816973 Msa1040430:intron
AACATTTCTGATTCCATCAA+CGG 0.515870 7_1:-77816151 None:intergenic
CAGAAGTTGGCTCAGATACA+AGG 0.516737 7_1:+77826643 Msa1040430:three_prime_UTR
CAGAGGTACAGGCTATGAAA+TGG 0.518191 7_1:+77823084 Msa1040430:CDS
AGTACCTTTCAGCTTCCGAC+AGG 0.518329 7_1:-77817031 None:intergenic
AGTCATAAGAAGCTTGGTTC+GGG 0.520021 7_1:+77818950 Msa1040430:CDS
TCCAGCAAATTCTGTATCGT+CGG 0.520174 7_1:-77826351 None:intergenic
CCAGCAAATTCTGTATCGTC+GGG 0.520959 7_1:-77826350 None:intergenic
ATGGAGCATCAGATCAAGAC+CGG 0.523262 7_1:+77823103 Msa1040430:CDS
ACAAATCAGTCTACTGTGGT+TGG 0.524722 7_1:+77824409 Msa1040430:CDS
GAATGAGAATACAATCAGTT+GGG 0.527326 7_1:-77826815 None:intergenic
CTGGCTGAGATTAGACAGTC+TGG 0.527646 7_1:+77824346 Msa1040430:CDS
TCAACATCTGATTTGCTTTG+GGG 0.527680 7_1:-77825232 None:intergenic
TGCATCGACATCAGAGGCTA+AGG 0.529355 7_1:-77824551 None:intergenic
TAGCGAGTTGTTACACTTAG+GGG 0.530087 7_1:-77826552 None:intergenic
ACATGGGTATCAAGGCTTTG+AGG 0.530490 7_1:+77825735 Msa1040430:CDS
CATTGATATCACAGATGGGT+AGG 0.531578 7_1:+77822529 Msa1040430:CDS
ATGTTGACATTGTCATTGAA+AGG 0.533510 7_1:+77825248 Msa1040430:CDS
AGTAGCGAGTTGTTACACTT+AGG 0.534129 7_1:-77826554 None:intergenic
CACAGTAGACTGATTTGTTG+AGG 0.534134 7_1:-77824404 None:intergenic
TACTGTATGTGATCAGAAGT+TGG 0.534377 7_1:+77826630 Msa1040430:three_prime_UTR
ACAGTAGACTGATTTGTTGA+GGG 0.534649 7_1:-77824403 None:intergenic
CTTCTAATGAAACAGCACTT+AGG 0.536542 7_1:+77825158 Msa1040430:CDS
GTTCATTATATGTTCATCAT+CGG 0.536899 7_1:+77822464 Msa1040430:CDS
ATAACCCAAGAAGAATCAAA+TGG 0.536962 7_1:+77822639 Msa1040430:CDS
TAATGAAACAGCACTTAGGA+TGG 0.538330 7_1:+77825162 Msa1040430:CDS
GACGGACCGAATACCATCAA+TGG 0.538883 7_1:-77820719 None:intergenic
CAAGAACATGTTGGAGTACA+CGG 0.540243 7_1:+77820861 Msa1040430:CDS
GTTGCAAATCCAACCATTGA+TGG 0.540686 7_1:+77820706 Msa1040430:CDS
ATCAACAGCATGTCGAGCCA+AGG 0.542430 7_1:+77822907 Msa1040430:CDS
CCTCCTCTGAGTTAGGCAAA+TGG 0.547110 7_1:-77818905 None:intergenic
TAACAGCATCTAAGGCCTCT+CGG 0.552645 7_1:-77822821 None:intergenic
TTGGTCCACCATCTGACCAT+CGG 0.553960 7_1:-77817190 None:intergenic
CAGAGGCTCCAATTCGATTG+AGG 0.554302 7_1:-77817913 None:intergenic
TGACAAATGTGCTTCAATGC+AGG 0.556907 7_1:+77819098 Msa1040430:CDS
CTTACAAGAGTCCTCGTACA+TGG 0.557650 7_1:+77825208 Msa1040430:CDS
GTTTAACTCCCTGTGGACAA+AGG 0.557856 7_1:-77824157 None:intergenic
TACAGAATTTGCTGGATGGA+TGG 0.558576 7_1:+77826358 Msa1040430:CDS
GTTACTCAGGAGAGATCCAA+TGG 0.559940 7_1:+77820453 Msa1040430:CDS
AGCATGTCGAGCCAAGGGTA+AGG 0.561652 7_1:+77822913 Msa1040430:CDS
TCCAATAATATACAAATACA+TGG 0.563105 7_1:+77823355 Msa1040430:CDS
ATATGCAGTCATAAGAAGCT+TGG 0.565769 7_1:+77818944 Msa1040430:CDS
TTTAATTGTCAAATGGGGCG+TGG 0.566188 7_1:+77817851 Msa1040430:CDS
GCCATAATCTGTATTAGACT+TGG 0.566330 7_1:+77825046 Msa1040430:CDS
TTACATAGATGACTAAGCTC+GGG 0.567064 7_1:-77826389 None:intergenic
AAAGCCACCCTCCTTACCCT+TGG 0.567084 7_1:-77822924 None:intergenic
CTTGTAAAGGAAAATATTGG+TGG 0.568165 7_1:+77826726 Msa1040430:three_prime_UTR
TGGTGCACCTCATGTTTACA+AGG 0.568766 7_1:+77823375 Msa1040430:CDS
GAATATCCAAGTGCACCCAT+TGG 0.568853 7_1:-77820469 None:intergenic
TCTACTGTCAATGCCAGAAA+CGG 0.568999 7_1:+77823274 Msa1040430:CDS
TAGCTGAATCATCTGATGGC+CGG 0.569483 7_1:+77820518 Msa1040430:CDS
TCAGCATGGAGATGCAGTGA+TGG 0.570445 7_1:+77823249 Msa1040430:CDS
ATATACCGTATACTCGAGGT+TGG 0.570551 7_1:-77816380 None:intergenic
TTGGAAGCGAAGCATTTGAT+GGG 0.570685 7_1:+77823006 Msa1040430:CDS
TATCACAGATGGGTAGGGGC+AGG 0.570952 7_1:+77822535 Msa1040430:CDS
GGAGCACCGTCCACTCTCTC+CGG 0.571138 7_1:-77820646 None:intergenic
GGTAGGGGCAGGACTACTAC+TGG 0.574467 7_1:+77822546 Msa1040430:CDS
CTGCCTTGTAAAACTTCGCG+TGG 0.575185 7_1:+77822581 Msa1040430:CDS
CACATGATACCGGTTCCCAT+TGG 0.575268 7_1:-77817209 None:intergenic
GATGGCCGGCCATCTGAGAT+GGG 0.575509 7_1:+77820532 Msa1040430:CDS
ATGTCAAAGTCAGAACGCTC+GGG 0.576686 7_1:-77822336 None:intergenic
ATCGGCACTGTAGGTTACTC+AGG 0.577341 7_1:+77820440 Msa1040430:intron
TCAAATGGCGGTTCTTCAAG+TGG 0.577667 7_1:+77822654 Msa1040430:CDS
GTTATTCATGAAACAGATGA+TGG 0.580771 7_1:+77822183 Msa1040430:CDS
ATTGATATCACAGATGGGTA+GGG 0.581515 7_1:+77822530 Msa1040430:CDS
GTTACATAGATGACTAAGCT+CGG 0.581853 7_1:-77826390 None:intergenic
CGGGCAGTTCATCCGTCACA+AGG 0.582085 7_1:-77817170 None:intergenic
CATTACCCATCTCAGATGGC+CGG 0.584057 7_1:-77820537 None:intergenic
TTCACAGAATCACATGATAC+CGG 0.585086 7_1:-77817219 None:intergenic
TGACCACAACTTACAAGCAT+CGG 0.585302 7_1:-77826438 None:intergenic
ATGGATATGATATTGTCTAT+CGG 0.585548 7_1:+77824500 Msa1040430:CDS
GTATACTCGAGGTTGGAGAA+TGG 0.585772 7_1:-77816373 None:intergenic
GTATTAGGTTGCACAGCTAA+GGG 0.586010 7_1:+77826777 Msa1040430:three_prime_UTR
ACATCCTGTCGGAAGCTGAA+AGG 0.586883 7_1:+77817027 Msa1040430:CDS
AAGATGGCTCACCACAGGAC+CGG 0.587589 7_1:-77824214 None:intergenic
GACCGAATACCATCAATGGT+TGG 0.587996 7_1:-77820715 None:intergenic
GGCACCATTATCAAATAATG+TGG 0.590420 7_1:-77822793 None:intergenic
GGGTATTGACTGTGAAAGAG+TGG 0.591042 7_1:+77822092 Msa1040430:intron
CTGTATTAGACTTGGTGCAG+AGG 0.591532 7_1:+77825054 Msa1040430:CDS
ATGCTGCAAAAGCAATTAGA+CGG 0.592763 7_1:-77822980 None:intergenic
TCAAAAGCTTGGAAGCTGAA+GGG 0.593674 7_1:+77822268 Msa1040430:CDS
AGCGATGGCAAGAGTAGTGA+AGG 0.595156 7_1:+77815957 Msa1040430:exon
CGTCTTTCTCCTCAGATCGA+AGG 0.595717 7_1:+77816072 Msa1040430:CDS
TTAGGAGCACCTTCGATCTG+AGG 0.596385 7_1:-77816081 None:intergenic
ATGTCGAGCCAAGGGTAAGG+AGG 0.596875 7_1:+77822916 Msa1040430:CDS
CAGGTTTGTTTAACTCCCTG+TGG 0.598057 7_1:-77824164 None:intergenic
TTGATATCACAGATGGGTAG+GGG 0.599729 7_1:+77822531 Msa1040430:CDS
TACGAGGAATTGCAAGTGGA+GGG 0.600685 7_1:+77817350 Msa1040430:CDS
CGTCGGAATCACCGGTCCTG+TGG 0.601954 7_1:+77824203 Msa1040430:CDS
TCGCAGAATGCTATTGCGAT+AGG 0.602573 7_1:-77819307 None:intergenic
CTTCTGATCACATACAGTAT+GGG 0.602766 7_1:-77826626 None:intergenic
TGTGAAGTTTACTTTAAACA+AGG 0.603020 7_1:-77815849 None:intergenic
TATGTATCAGGACCAAATGA+TGG 0.603767 7_1:-77825103 None:intergenic
ATTCCAAGAAGCAATTCTAT+GGG 0.603855 7_1:+77818849 Msa1040430:CDS
TGGAGCATCAGATCAAGACC+GGG 0.604952 7_1:+77823104 Msa1040430:CDS
AGGATTTGCAGTACTAATGG+TGG 0.606517 7_1:+77820748 Msa1040430:CDS
TCAACAGCATGTCGAGCCAA+GGG 0.607888 7_1:+77822908 Msa1040430:CDS
TTGTGCAATACGGGTAGAAG+AGG 0.608175 7_1:-77826508 None:intergenic
AGGAGGGTGGCTTTAGATCG+TGG 0.609612 7_1:+77822933 Msa1040430:CDS
GCAACATTACCCATCTCAGA+TGG 0.610023 7_1:-77820541 None:intergenic
TGCTTTGGGGACCATGTACG+AGG 0.611692 7_1:-77825219 None:intergenic
TGAACTGCCCGATGGTCAGA+TGG 0.612562 7_1:+77817182 Msa1040430:CDS
ACTCAGAGGAGGCAATTCGT+AGG 0.613872 7_1:+77818916 Msa1040430:CDS
TGGACGAACGACAACCGGAA+TGG 0.615255 7_1:+77817871 Msa1040430:CDS
AGGTTGAACACATGGAAGCA+CGG 0.616167 7_1:+77824308 Msa1040430:intron
ACTTTCCGAGCAGTGAACCC+AGG 0.617032 7_1:-77824084 None:intergenic
GAATCACAAGAGTCTCAGCA+TGG 0.617063 7_1:+77823235 Msa1040430:CDS
TACCTCTTTGTATCGCACAC+AGG 0.619205 7_1:+77824998 Msa1040430:CDS
GAGGAAGTGATGAGAATGCG+AGG 0.620138 7_1:+77815985 Msa1040430:CDS
ACGATACAGAATTTGCTGGA+TGG 0.622436 7_1:+77826354 Msa1040430:CDS
TGGTGGAGTTGCATATGCAA+TGG 0.623019 7_1:+77825024 Msa1040430:CDS
AAACATACCTTGTAAACATG+AGG 0.623618 7_1:-77823382 None:intergenic
CTACGAGGAATTGCAAGTGG+AGG 0.625746 7_1:+77817349 Msa1040430:CDS
AACCTGTGTGCGATACAAAG+AGG 0.625941 7_1:-77825000 None:intergenic
CTGTATTGCATCGACATCAG+AGG 0.626708 7_1:-77824557 None:intergenic
GCACGTGTACCCATCACCGA+TGG 0.627010 7_1:+77822306 Msa1040430:CDS
ATCTCATTGATATCACAGAT+GGG 0.627728 7_1:+77822525 Msa1040430:CDS
CGAGCCAAGGGTAAGGAGGG+TGG 0.629839 7_1:+77822920 Msa1040430:CDS
AATGAAACAGCACTTAGGAT+GGG 0.630394 7_1:+77825163 Msa1040430:CDS
AAGAGTAGTGAAGGAACCAG+AGG 0.632470 7_1:+77815966 Msa1040430:CDS
TGGTCATGCCGATGTACAGT+TGG 0.632914 7_1:+77826455 Msa1040430:three_prime_UTR
TGGATATAAGATCCTTGTGA+CGG 0.633173 7_1:+77817158 Msa1040430:CDS
GGTCTACGAGGAATTGCAAG+TGG 0.634386 7_1:+77817346 Msa1040430:intron
ACTGCAAATCCTATGAATGA+CGG 0.637076 7_1:-77820737 None:intergenic
TGTCGAGCCAAGGGTAAGGA+GGG 0.637558 7_1:+77822917 Msa1040430:CDS
TATAATTCAGGTTGAACACA+TGG 0.638070 7_1:+77824300 Msa1040430:intron
AAGATAGCTGAATCATCTGA+TGG 0.638341 7_1:+77820514 Msa1040430:CDS
AGTTTGCCGGAGAGAGTGGA+CGG 0.639259 7_1:+77820640 Msa1040430:CDS
CGGGTAGAAGAGGTTATAGG+TGG 0.642366 7_1:-77826498 None:intergenic
GAGTTGCCATGCAACATACA+GGG 0.643785 7_1:-77824008 None:intergenic
AGCAAATGCCAACTGTACAT+CGG 0.646304 7_1:-77826463 None:intergenic
CTGAGATTAGACAGTCTGGT+GGG 0.647806 7_1:+77824350 Msa1040430:CDS
TGGTGTTTGAATCAAATCAG+AGG 0.652464 7_1:-77822235 None:intergenic
TTACTCAGGAGAGATCCAAT+GGG 0.654480 7_1:+77820454 Msa1040430:CDS
ACTACGAGATGCTACTCTTG+CGG 0.654524 7_1:-77826593 None:intergenic
ATGCCGATGCTTGTAAGTTG+TGG 0.657001 7_1:+77826435 Msa1040430:three_prime_UTR
CCATTTGCCTAACTCAGAGG+AGG 0.664043 7_1:+77818905 Msa1040430:CDS
ACGACCATACAAGAACATGT+TGG 0.665121 7_1:+77820852 Msa1040430:CDS
GATATGATATTGTCTATCGG+AGG 0.666425 7_1:+77824503 Msa1040430:CDS
ACGGCTGAAAGAAGACACAC+TGG 0.666516 7_1:+77824327 Msa1040430:CDS
TGACCATTTGCCTAACTCAG+AGG 0.669314 7_1:+77818902 Msa1040430:CDS
TTGGTTGCATCAGAGGCCAG+AGG 0.671610 7_1:+77823067 Msa1040430:CDS
CTCAACAAATCAGTCTACTG+TGG 0.677504 7_1:+77824405 Msa1040430:CDS
TGGATACCCTGTATGTTGCA+TGG 0.682215 7_1:+77824002 Msa1040430:CDS
ACCCAAGAAGAATCAAATGG+CGG 0.682306 7_1:+77822642 Msa1040430:CDS
GTGACGGATGAACTGCCCGA+TGG 0.685590 7_1:+77817174 Msa1040430:CDS
GGCAACTCCAACCATCTCTG+GGG 0.686869 7_1:+77824023 Msa1040430:CDS
TCAGAGGAGGCAATTCGTAG+GGG 0.691941 7_1:+77818918 Msa1040430:CDS
GAAGTGATGAGAATGCGAGG+AGG 0.695531 7_1:+77815988 Msa1040430:CDS
ATATATATACCGTATACTCG+AGG 0.697554 7_1:-77816384 None:intergenic
TTTGAAAGAAGACATCCTGT+CGG 0.700983 7_1:+77817016 Msa1040430:CDS
ACTGCCCGATGGTCAGATGG+TGG 0.703611 7_1:+77817185 Msa1040430:CDS
TGGATGCTAAGTCTAAACCT+GGG 0.704882 7_1:+77824067 Msa1040430:CDS
GCTGAGATTAGACAGTCTGG+TGG 0.723709 7_1:+77824349 Msa1040430:CDS
GCATCAGATCAAGACCGGGG+AGG 0.730479 7_1:+77823108 Msa1040430:CDS
GGAGCATCAGATCAAGACCG+GGG 0.732456 7_1:+77823105 Msa1040430:CDS
TAATGGTGCCGAATGCCGAG+AGG 0.736013 7_1:+77822806 Msa1040430:CDS
GAACACGTTCATAATCAACA+AGG 0.742109 7_1:-77817376 None:intergenic
GTTGATACACTCAAACACGT+CGG 0.746502 7_1:+77824186 Msa1040430:CDS
GTGGTGCTGAGTACTTGGAG+CGG 0.751476 7_1:+77822952 Msa1040430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTATTTTTTT+TGG + chr7_1:77816442-77816461 Msa1040430:intron 0.0%
!!! TTTGCATAAATTATTTTTTT+AGG + chr7_1:77817454-77817473 Msa1040430:intron 10.0%
!!! ATAATTTTTAATTGTCAAAT+GGG + chr7_1:77817845-77817864 Msa1040430:CDS 10.0%
!!! ATTTTATATTAACAAAAAAC+TGG - chr7_1:77818153-77818172 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr7_1:77819739-77819758 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr7_1:77819740-77819759 None:intergenic 10.0%
!!! AATAAATTTGAAATTATGAA+AGG + chr7_1:77820911-77820930 Msa1040430:intron 10.0%
!!! ATAAATTTGAAATTATGAAA+GGG + chr7_1:77820912-77820931 Msa1040430:intron 10.0%
!!! TAATATTGTTTTATTATTGT+GGG + chr7_1:77821660-77821679 Msa1040430:intron 10.0%
!! CTTTAAATTTCATATTAATT+TGG + chr7_1:77822018-77822037 Msa1040430:intron 10.0%
!!! TTATTTTCAAAATTCAAATA+AGG + chr7_1:77823169-77823188 Msa1040430:intron 10.0%
!! AAAAAAGATAAAATATAAAC+TGG + chr7_1:77823876-77823895 Msa1040430:intron 10.0%
!!! TAATATAAAATGTATTTTGA+TGG + chr7_1:77825987-77826006 Msa1040430:intron 10.0%
!! TATATATATCAAAAAACTAT+AGG - chr7_1:77826840-77826859 None:intergenic 10.0%
!!! AAGGTTTTTTATTTGTTATA+GGG + chr7_1:77817687-77817706 Msa1040430:intron 15.0%
!! TTTCTAAGTTAATAAATACT+AGG - chr7_1:77817716-77817735 None:intergenic 15.0%
!!! GATAATTTTTAATTGTCAAA+TGG + chr7_1:77817844-77817863 Msa1040430:CDS 15.0%
!!! TAATTTTTAATTGTCAAATG+GGG + chr7_1:77817846-77817865 Msa1040430:CDS 15.0%
!! AAGAGAATAAACAATAAAAT+TGG - chr7_1:77817966-77817985 None:intergenic 15.0%
!!! TTTTGTTAATATAAAATGTG+TGG + chr7_1:77818156-77818175 Msa1040430:intron 15.0%
!! TGATTTAAACTTAATAACAA+AGG - chr7_1:77818766-77818785 None:intergenic 15.0%
!! GTTATTAAGTTTAAATCATA+AGG + chr7_1:77818768-77818787 Msa1040430:intron 15.0%
!!! AATAATTAGATTTTTGTCAA+TGG - chr7_1:77818810-77818829 None:intergenic 15.0%
!! TTATTATGTTATTACATGAT+AGG + chr7_1:77818825-77818844 Msa1040430:intron 15.0%
!! TATTATGTTATTACATGATA+GGG + chr7_1:77818826-77818845 Msa1040430:intron 15.0%
!!! TTAAAATTTTAATAACTGTG+AGG + chr7_1:77819522-77819541 Msa1040430:intron 15.0%
!! TATTAATTAGAGTTATAAAG+GGG - chr7_1:77819678-77819697 None:intergenic 15.0%
!! GTATTAATTAGAGTTATAAA+GGG - chr7_1:77819679-77819698 None:intergenic 15.0%
!! AGTATTAATTAGAGTTATAA+AGG - chr7_1:77819680-77819699 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr7_1:77819738-77819757 None:intergenic 15.0%
!! GTTAAATAAACAAAGATATA+TGG - chr7_1:77820307-77820326 None:intergenic 15.0%
!!! TAAATTTGAAATTATGAAAG+GGG + chr7_1:77820913-77820932 Msa1040430:intron 15.0%
!!! ATTGCTAAGAATTTTTTTTT+TGG - chr7_1:77821065-77821084 None:intergenic 15.0%
!!! GTATTTTGATCTTATATAAA+GGG - chr7_1:77821626-77821645 None:intergenic 15.0%
!! CTTTATATAAGATCAAAATA+CGG + chr7_1:77821625-77821644 Msa1040430:intron 15.0%
!!! CTAATATTGTTTTATTATTG+TGG + chr7_1:77821659-77821678 Msa1040430:intron 15.0%
!!! ATTAAAAGAAGACATTTTAA+GGG + chr7_1:77822131-77822150 Msa1040430:CDS 15.0%
!!! AAAGAAATACATTTTAAGTA+TGG - chr7_1:77823320-77823339 None:intergenic 15.0%
!!! TTATCTTTTTTATTGTTTGA+TGG - chr7_1:77823867-77823886 None:intergenic 15.0%
!! AATTGATATATAATGTAATG+TGG + chr7_1:77823943-77823962 Msa1040430:intron 15.0%
!!! GAAAAAGTTATTATTTTGTA+AGG + chr7_1:77826077-77826096 Msa1040430:intron 15.0%
!!! AATGTAATACAATTTTTAGC+AGG - chr7_1:77817309-77817328 None:intergenic 20.0%
!!! CATTTTGTTTTCTTTTTTGT+AGG + chr7_1:77817325-77817344 Msa1040430:intron 20.0%
!!! GCATAAATTATTTTTTTAGG+TGG + chr7_1:77817457-77817476 Msa1040430:intron 20.0%
!!! ATATTCTTTTGTTACAGTTA+AGG + chr7_1:77817596-77817615 Msa1040430:intron 20.0%
!! ATAACAAATAAAAAACCTTG+AGG - chr7_1:77817686-77817705 None:intergenic 20.0%
!!! CAAGGTTTTTTATTTGTTAT+AGG + chr7_1:77817686-77817705 Msa1040430:intron 20.0%
!! AATCTTGTATTCAAATTTCT+TGG - chr7_1:77818009-77818028 None:intergenic 20.0%
!! TCATATTATTGCTAATTTAC+AGG + chr7_1:77818384-77818403 Msa1040430:intron 20.0%
!! TACAACTACAACTATAATTT+AGG - chr7_1:77818537-77818556 None:intergenic 20.0%
!! AAAAAATCATTAGAAAGAGA+TGG - chr7_1:77818722-77818741 None:intergenic 20.0%
!!! TAATTTGCTAAAATTCTTCA+GGG + chr7_1:77819039-77819058 Msa1040430:intron 20.0%
!! CTAAAAAATAACTTCTATGT+TGG + chr7_1:77819153-77819172 Msa1040430:intron 20.0%
!!! AGTAGTATTGAAAATTGAAA+TGG - chr7_1:77819621-77819640 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG - chr7_1:77819653-77819672 None:intergenic 20.0%
!! AAAAGTGGAATATATTGAAT+TGG - chr7_1:77819654-77819673 None:intergenic 20.0%
!!! ATCCAGATTCTTTTATAAAA+TGG + chr7_1:77820213-77820232 Msa1040430:intron 20.0%
!!! TTCCATTTTATAAAAGAATC+TGG - chr7_1:77820218-77820237 None:intergenic 20.0%
!!! AATAAATTTTCAAACCCAAT+CGG + chr7_1:77820236-77820255 Msa1040430:intron 20.0%
!!! AAATTTGAAATTATGAAAGG+GGG + chr7_1:77820914-77820933 Msa1040430:intron 20.0%
!! AAAAAAAATTCTTAGCAATG+TGG + chr7_1:77821066-77821085 Msa1040430:intron 20.0%
!! TGTTATGTCATTATAATAGT+GGG + chr7_1:77821262-77821281 Msa1040430:intron 20.0%
!!! CAAGGTTACATATTATATTT+TGG - chr7_1:77821441-77821460 None:intergenic 20.0%
!! CAAAATATAATATGTAACCT+TGG + chr7_1:77821439-77821458 Msa1040430:intron 20.0%
!!! CGTATTTTGATCTTATATAA+AGG - chr7_1:77821627-77821646 None:intergenic 20.0%
!! TAGTTAAACTCCATTAAAAT+AGG - chr7_1:77821713-77821732 None:intergenic 20.0%
!! GTTTAAATGAAGTGTAAAAA+TGG + chr7_1:77821780-77821799 Msa1040430:intron 20.0%
!!! GATTAAAAGAAGACATTTTA+AGG + chr7_1:77822130-77822149 Msa1040430:CDS 20.0%
!!! TCATCACTCAATATTTTAAT+TGG - chr7_1:77822618-77822637 None:intergenic 20.0%
!! TATCTTCATTTGTGAAATAT+TGG - chr7_1:77822715-77822734 None:intergenic 20.0%
!! ATAACCACATTATTTGATAA+TGG + chr7_1:77822789-77822808 Msa1040430:CDS 20.0%
!!! TGAATACTTTTCTATATTGT+AGG - chr7_1:77822887-77822906 None:intergenic 20.0%
!! ATAATGTCAGTTTAAATTGT+AGG + chr7_1:77823201-77823220 Msa1040430:intron 20.0%
!! TCCAATAATATACAAATACA+TGG + chr7_1:77823355-77823374 Msa1040430:CDS 20.0%
!! ACCATGTATTTGTATATTAT+TGG - chr7_1:77823359-77823378 None:intergenic 20.0%
!!! TATTCTTTTCTAAAAGATGA+TGG + chr7_1:77824481-77824500 Msa1040430:CDS 20.0%
!! TATTTACATACTGTCTAAAA+TGG - chr7_1:77824669-77824688 None:intergenic 20.0%
!!! AATGTATTTTGTTTGAAACA+TGG + chr7_1:77825358-77825377 Msa1040430:intron 20.0%
!! ATAATATAGTTGCAAAGAAA+AGG - chr7_1:77825482-77825501 None:intergenic 20.0%
!!! ATTTTTTTTAATAGATGTGC+AGG + chr7_1:77825620-77825639 Msa1040430:intron 20.0%
!!! TAATTCTTCTCATATTTTAG+AGG - chr7_1:77825831-77825850 None:intergenic 20.0%
!! ATCAATTTCAATAAACAATG+TGG - chr7_1:77825946-77825965 None:intergenic 20.0%
!!! ATTTGAAGTACACATATTTT+TGG + chr7_1:77826201-77826220 Msa1040430:intron 20.0%
! TGTGAAGTTTACTTTAAACA+AGG - chr7_1:77815852-77815871 None:intergenic 25.0%
!! GAAAAGAAAAGAAAGTATAC+CGG - chr7_1:77816240-77816259 None:intergenic 25.0%
!!! GATTTTAAATTGTGGTCTTA+TGG + chr7_1:77816515-77816534 Msa1040430:intron 25.0%
! TCAAATAAGTCAATACAAAC+AGG - chr7_1:77816541-77816560 None:intergenic 25.0%
!!! ATATAGATTTTGGTTCTGTT+TGG - chr7_1:77816784-77816803 None:intergenic 25.0%
! GAACCAAAATCTATATATTG+CGG + chr7_1:77816788-77816807 Msa1040430:intron 25.0%
! TGTGTGAAACTTGATTAAAA+TGG + chr7_1:77817258-77817277 Msa1040430:intron 25.0%
!!! TACAAGAAATCATTGGTTTA+AGG - chr7_1:77817760-77817779 None:intergenic 25.0%
!!! TACGCTTAATCTTTGATTTT+AGG + chr7_1:77817787-77817806 Msa1040430:intron 25.0%
!!! TAAGTAAATAAAAGTACCAG+AGG - chr7_1:77817933-77817952 None:intergenic 25.0%
! AATAGCTTTCAATAAGATAC+TGG - chr7_1:77818047-77818066 None:intergenic 25.0%
!!! TCAAAGTAGTACTTTTTTGA+AGG - chr7_1:77818098-77818117 None:intergenic 25.0%
! TGTTAATATAAAATGTGTGG+CGG + chr7_1:77818159-77818178 Msa1040430:intron 25.0%
! TTTCTTACCAATGTAATTTG+AGG + chr7_1:77818202-77818221 Msa1040430:intron 25.0%
!!! TTTTCAATTTTAATTCCCAG+CGG - chr7_1:77818682-77818701 None:intergenic 25.0%
! GAAATATCAAGTTTAATGTC+CGG - chr7_1:77818987-77819006 None:intergenic 25.0%
!!! CTAATTTGCTAAAATTCTTC+AGG + chr7_1:77819038-77819057 Msa1040430:intron 25.0%
! CAAGAAAGACAGATTAAATA+CGG - chr7_1:77819257-77819276 None:intergenic 25.0%
! TGTGTACATTAATTCAGAAA+GGG + chr7_1:77819413-77819432 Msa1040430:intron 25.0%
!! TTTTCTGATTTCTCTTCATT+AGG + chr7_1:77819816-77819835 Msa1040430:intron 25.0%
!!! ATTAGGTTGACATTAATTTC+TGG + chr7_1:77820104-77820123 Msa1040430:intron 25.0%
! TTTAAATTGCTATGATGCTT+AGG + chr7_1:77820141-77820160 Msa1040430:intron 25.0%
! ATTAAAATCAGAAACCCAAT+TGG - chr7_1:77820390-77820409 None:intergenic 25.0%
!! TTTTAATGTCTACCGTTATT+TGG + chr7_1:77820403-77820422 Msa1040430:intron 25.0%
!! TCATATTATGCCAAAGTATT+GGG - chr7_1:77820777-77820796 None:intergenic 25.0%
!!! AGAATTTTTTTTTTGGCCAA+TGG - chr7_1:77821058-77821077 None:intergenic 25.0%
!! TTTTCCATGAGATTATTCTT+TGG - chr7_1:77821114-77821133 None:intergenic 25.0%
! TGGAAAATTAGCATTCTAAT+TGG + chr7_1:77821127-77821146 Msa1040430:intron 25.0%
! GGAAAATTAGCATTCTAATT+GGG + chr7_1:77821128-77821147 Msa1040430:intron 25.0%
! CACTATTATAATGACATAAC+AGG - chr7_1:77821263-77821282 None:intergenic 25.0%
! CTGTTATGTCATTATAATAG+TGG + chr7_1:77821261-77821280 Msa1040430:intron 25.0%
! ATATACGATGAACGATAAAA+TGG + chr7_1:77821368-77821387 Msa1040430:intron 25.0%
! TGGTAAAAAATAATCAAGTG+AGG + chr7_1:77821388-77821407 Msa1040430:intron 25.0%
! GGTAAAAAATAATCAAGTGA+GGG + chr7_1:77821389-77821408 Msa1040430:intron 25.0%
! GTAAAAAATAATCAAGTGAG+GGG + chr7_1:77821390-77821409 Msa1040430:intron 25.0%
!!! ATGGATTGTTCCTATTTTAA+TGG + chr7_1:77821700-77821719 Msa1040430:intron 25.0%
! TATCTATACCAATGCATAAA+GGG - chr7_1:77821839-77821858 None:intergenic 25.0%
! TTATCTATACCAATGCATAA+AGG - chr7_1:77821840-77821859 None:intergenic 25.0%
! CTAATGCTTAATTGTCTAAT+AGG + chr7_1:77821969-77821988 Msa1040430:intron 25.0%
! TGTTTCATGAATAACCATTA+TGG - chr7_1:77822178-77822197 None:intergenic 25.0%
! GTTCATTATATGTTCATCAT+CGG + chr7_1:77822464-77822483 Msa1040430:CDS 25.0%
!! TGTCATTTATACCAAAAACA+CGG - chr7_1:77822752-77822771 None:intergenic 25.0%
! TAAATGACATTCTCTTGTTA+TGG + chr7_1:77822763-77822782 Msa1040430:CDS 25.0%
! TTGATTAGAAAACACTTACA+GGG - chr7_1:77823145-77823164 None:intergenic 25.0%
! TTTGATTAGAAAACACTTAC+AGG - chr7_1:77823146-77823165 None:intergenic 25.0%
! CTTAAAATGTATTTCTTTCC+TGG + chr7_1:77823322-77823341 Msa1040430:CDS 25.0%
! CATTTCAAATATTGAATGAG+TGG - chr7_1:77823659-77823678 None:intergenic 25.0%
!!! GAAAAAGTATTAACATGCTA+TGG + chr7_1:77823708-77823727 Msa1040430:intron 25.0%
! CTATGATACAATTACATAAG+AGG - chr7_1:77823777-77823796 None:intergenic 25.0%
!! TTGTACAATAGTTTGTCTAT+TGG + chr7_1:77824235-77824254 Msa1040430:intron 25.0%
! ATGGATATGATATTGTCTAT+CGG + chr7_1:77824500-77824519 Msa1040430:CDS 25.0%
!!! GCTTATGATTGTTGATAATT+TGG + chr7_1:77824732-77824751 Msa1040430:intron 25.0%
!! ATGTTGAATGCATTTTCATA+TGG - chr7_1:77825307-77825326 None:intergenic 25.0%
!!! ATATTATGTCATCACTTTTG+TGG + chr7_1:77825495-77825514 Msa1040430:intron 25.0%
! AGAAAACATTTATGTTAGCA+AGG - chr7_1:77825778-77825797 None:intergenic 25.0%
!! TGCTAACATAAATGTTTTCT+TGG + chr7_1:77825778-77825797 Msa1040430:intron 25.0%
!!! ACATATTTTTGGATTTGTGA+GGG + chr7_1:77826212-77826231 Msa1040430:intron 25.0%
!!! AAATAAGGTATTGTGCAATA+CGG - chr7_1:77826521-77826540 None:intergenic 25.0%
!! TAGCTTGTAAAGGAAAATAT+TGG + chr7_1:77826723-77826742 Msa1040430:three_prime_UTR 25.0%
AACATTTCTGATTCCATCAA+CGG - chr7_1:77816154-77816173 None:intergenic 30.0%
!! AAAGAACTTGTTGTTTGTTC+TGG - chr7_1:77816197-77816216 None:intergenic 30.0%
AGAACAAACAACAAGTTCTT+TGG + chr7_1:77816196-77816215 Msa1040430:CDS 30.0%
AATCAGCTTGTGTACATTAA+TGG + chr7_1:77816319-77816338 Msa1040430:intron 30.0%
ATATATATACCGTATACTCG+AGG - chr7_1:77816387-77816406 None:intergenic 30.0%
! CCACAATTTAAAATCTCATG+TGG - chr7_1:77816510-77816529 None:intergenic 30.0%
! CCACATGAGATTTTAAATTG+TGG + chr7_1:77816507-77816526 Msa1040430:intron 30.0%
CTAATTTCCATAATCACTTC+CGG + chr7_1:77816639-77816658 Msa1040430:intron 30.0%
!! AAGCTGTTTTCATAATCTTC+CGG - chr7_1:77816661-77816680 None:intergenic 30.0%
TACTCAATCAGGGAATTAAT+AGG + chr7_1:77816967-77816986 Msa1040430:intron 30.0%
ACTCAATCAGGGAATTAATA+GGG + chr7_1:77816968-77816987 Msa1040430:intron 30.0%
TAATGTTGACGTAACAGATA+TGG + chr7_1:77817138-77817157 Msa1040430:intron 30.0%
! GGTGATTTTTCATCAGTTAT+AGG - chr7_1:77817401-77817420 None:intergenic 30.0%
AACTGATGAAAAATCACCTA+AGG + chr7_1:77817403-77817422 Msa1040430:CDS 30.0%
! TTTTGTTACAGTTAAGGAGT+TGG + chr7_1:77817602-77817621 Msa1040430:intron 30.0%
TTTGTTACAGTTAAGGAGTT+GGG + chr7_1:77817603-77817622 Msa1040430:intron 30.0%
!!! TTTAATTTTTTGTCCTGTCG+TGG + chr7_1:77817640-77817659 Msa1040430:intron 30.0%
GCTAAGATACAAGAAATCAT+TGG - chr7_1:77817767-77817786 None:intergenic 30.0%
CAAATTTCTTGGACGAAAAT+TGG - chr7_1:77817998-77818017 None:intergenic 30.0%
TTGTTGTCAGTTGAGTTTAT+TGG + chr7_1:77818270-77818289 Msa1040430:intron 30.0%
ACAACTATAATTTAGGCCAT+TGG - chr7_1:77818530-77818549 None:intergenic 30.0%
ATTCCAAGAAGCAATTCTAT+GGG + chr7_1:77818849-77818868 Msa1040430:CDS 30.0%
!!! ATTTTTTAGTACCACGAGAT+TGG - chr7_1:77819142-77819161 None:intergenic 30.0%
ATTTCCTTCTTTGTATCTTG+TGG + chr7_1:77819205-77819224 Msa1040430:intron 30.0%
TTTCCTTCTTTGTATCTTGT+GGG + chr7_1:77819206-77819225 Msa1040430:intron 30.0%
CTGTGTACATTAATTCAGAA+AGG + chr7_1:77819412-77819431 Msa1040430:intron 30.0%
! GTCAAAGTAGTTTTTCCAAT+TGG + chr7_1:77819460-77819479 Msa1040430:intron 30.0%
!!! GGGACACTTTTTTTAGTAAA+TGG - chr7_1:77819586-77819605 None:intergenic 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG - chr7_1:77819606-77819625 None:intergenic 30.0%
! TTGAAATGGCTCAGTTATTT+TGG - chr7_1:77819607-77819626 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr7_1:77819731-77819750 None:intergenic 30.0%
ATACTGGAACCAAGTTATAT+GGG - chr7_1:77819981-77820000 None:intergenic 30.0%
AATACTGGAACCAAGTTATA+TGG - chr7_1:77819982-77820001 None:intergenic 30.0%
TCCAGTATTAATGAAATCCT+TGG + chr7_1:77819993-77820012 Msa1040430:intron 30.0%
CCAGTATTAATGAAATCCTT+GGG + chr7_1:77819994-77820013 Msa1040430:intron 30.0%
!! TTGACATTAATTTCTGGTAG+TGG + chr7_1:77820110-77820129 Msa1040430:intron 30.0%
! TGACATGAGAAAGTATATCA+CGG - chr7_1:77820336-77820355 None:intergenic 30.0%
TTGCACAATCTTTACCAATT+GGG + chr7_1:77820373-77820392 Msa1040430:intron 30.0%
TCAGCTATCTTTGTTAAAGA+TGG - chr7_1:77820505-77820524 None:intergenic 30.0%
CTCATATTATGCCAAAGTAT+TGG - chr7_1:77820778-77820797 None:intergenic 30.0%
TAAGTAGATGTCAGAAAAAC+TGG + chr7_1:77820942-77820961 Msa1040430:intron 30.0%
ATTATAGACATCTTACTGAG+AGG - chr7_1:77820999-77821018 None:intergenic 30.0%
!! TTTAAGTTGTACTAGTTAGC+AGG + chr7_1:77821030-77821049 Msa1040430:intron 30.0%
CATGAGATTATTCTTTGGTT+GGG - chr7_1:77821109-77821128 None:intergenic 30.0%
! AACGAAAATAACAGGTTTTG+TGG - chr7_1:77821228-77821247 None:intergenic 30.0%
! TAATGACATAACAGGTTTTG+TGG - chr7_1:77821255-77821274 None:intergenic 30.0%
TCGTTCATCGTATATAAAAG+CGG - chr7_1:77821363-77821382 None:intergenic 30.0%
AACCTCTTGTGTAAAAAACA+GGG + chr7_1:77821521-77821540 Msa1040430:intron 30.0%
! GGTTGTTAATCCTTTTGTTA+TGG + chr7_1:77821681-77821700 Msa1040430:intron 30.0%
TAGGAACAATCCATAACAAA+AGG - chr7_1:77821694-77821713 None:intergenic 30.0%
GAAATGACACAAACTCATAA+TGG + chr7_1:77821869-77821888 Msa1040430:intron 30.0%
GCATTCTTTCCTCTTATTAT+TGG + chr7_1:77822040-77822059 Msa1040430:intron 30.0%
TCCTCTTATTATTGGTGAAT+TGG + chr7_1:77822048-77822067 Msa1040430:intron 30.0%
TCCAATTCACCAATAATAAG+AGG - chr7_1:77822052-77822071 None:intergenic 30.0%
!! AAGCTGTAATTTGTTCTTTC+AGG + chr7_1:77822071-77822090 Msa1040430:intron 30.0%
!! AGCTGTAATTTGTTCTTTCA+GGG + chr7_1:77822072-77822091 Msa1040430:intron 30.0%
GTTATTCATGAAACAGATGA+TGG + chr7_1:77822183-77822202 Msa1040430:CDS 30.0%
ATGGTCATATATTTGATGCT+TGG + chr7_1:77822202-77822221 Msa1040430:CDS 30.0%
TGGTCATATATTTGATGCTT+GGG + chr7_1:77822203-77822222 Msa1040430:CDS 30.0%
!! AAGCTTTTGAAAACTTCAAG+TGG - chr7_1:77822258-77822277 None:intergenic 30.0%
! ACTTGAAGTTTTCAAAAGCT+TGG + chr7_1:77822257-77822276 Msa1040430:CDS 30.0%
!!! TGCTTTTGTTTTCAATTGTC+AGG + chr7_1:77822395-77822414 Msa1040430:CDS 30.0%
ATTAGCAGCTAGAAATGAAA+AGG - chr7_1:77822505-77822524 None:intergenic 30.0%
TATCTCATTGATATCACAGA+TGG + chr7_1:77822524-77822543 Msa1040430:CDS 30.0%
ATCTCATTGATATCACAGAT+GGG + chr7_1:77822525-77822544 Msa1040430:CDS 30.0%
ATAACCCAAGAAGAATCAAA+TGG + chr7_1:77822639-77822658 Msa1040430:CDS 30.0%
CTTCATTTGTGAAATATTGG+AGG - chr7_1:77822712-77822731 None:intergenic 30.0%
TCTATCAATAACAGCATCTA+AGG - chr7_1:77822832-77822851 None:intergenic 30.0%
ATGTCAGTTTAAATTGTAGG+AGG + chr7_1:77823204-77823223 Msa1040430:intron 30.0%
AAACATACCTTGTAAACATG+AGG - chr7_1:77823385-77823404 None:intergenic 30.0%
GTGCTAATTCTACGTATATT+TGG - chr7_1:77823483-77823502 None:intergenic 30.0%
TACACCATCGAACATATTAA+AGG - chr7_1:77823505-77823524 None:intergenic 30.0%
TATTTCGAAAAAATGCTGTC+TGG + chr7_1:77823529-77823548 Msa1040430:intron 30.0%
AGACAAACTATTGTACAAGA+TGG - chr7_1:77824233-77824252 None:intergenic 30.0%
ACTCATGGTAACTATAATTC+AGG + chr7_1:77824288-77824307 Msa1040430:intron 30.0%
!! TATAATTCAGGTTGAACACA+TGG + chr7_1:77824300-77824319 Msa1040430:intron 30.0%
AGAAAAGAATAAACTTCTGC+TGG - chr7_1:77824472-77824491 None:intergenic 30.0%
GTTTGTCTTGTAGAACTATA+TGG + chr7_1:77824795-77824814 Msa1040430:intron 30.0%
ACCAAGTCTAATACAGATTA+TGG - chr7_1:77825050-77825069 None:intergenic 30.0%
ATGTTGACATTGTCATTGAA+AGG + chr7_1:77825248-77825267 Msa1040430:CDS 30.0%
! TGAATGCATTTTCATATGGA+TGG - chr7_1:77825303-77825322 None:intergenic 30.0%
ACAAAAAGGGAAAAAAGACA+AGG - chr7_1:77825390-77825409 None:intergenic 30.0%
TAGCTTAAGATGCTAGTTAT+TGG + chr7_1:77825572-77825591 Msa1040430:intron 30.0%
TTGACGAACTTTCAATCAAA+TGG + chr7_1:77826029-77826048 Msa1040430:intron 30.0%
AAATCACAACCACCTTAAAA+TGG + chr7_1:77826137-77826156 Msa1040430:intron 30.0%
AATCACAACCACCTTAAAAT+GGG + chr7_1:77826138-77826157 Msa1040430:intron 30.0%
!!! CACATATTTTTGGATTTGTG+AGG + chr7_1:77826211-77826230 Msa1040430:intron 30.0%
ACAAAAGCAAATAGTCCTTA+TGG - chr7_1:77826259-77826278 None:intergenic 30.0%
!! AATCATATTTGTTTTCCTCC+AGG + chr7_1:77826279-77826298 Msa1040430:intron 30.0%
!! AATAAGGTATTGTGCAATAC+GGG - chr7_1:77826520-77826539 None:intergenic 30.0%
TTACAAGCTAGATTTCAGTT+TGG - chr7_1:77826713-77826732 None:intergenic 30.0%
! AACTGAAATCTAGCTTGTAA+AGG + chr7_1:77826713-77826732 Msa1040430:three_prime_UTR 30.0%
CTTGTAAAGGAAAATATTGG+TGG + chr7_1:77826726-77826745 Msa1040430:three_prime_UTR 30.0%
GAATGAGAATACAATCAGTT+GGG - chr7_1:77826818-77826837 None:intergenic 30.0%
!!! TGTTTTGACAACCAGGAAAA+TGG - chr7_1:77816050-77816069 None:intergenic 35.0%
CAGTACTTGTGACATTGTTT+GGG + chr7_1:77816580-77816599 Msa1040430:intron 35.0%
TAATCTTCCGGAAGTGATTA+TGG - chr7_1:77816649-77816668 None:intergenic 35.0%
! CAGCCGCAATATATAGATTT+TGG - chr7_1:77816794-77816813 None:intergenic 35.0%
! CCGCAATATATAGATTTTGG+CGG - chr7_1:77816791-77816810 None:intergenic 35.0%
CCGCCAAAATCTATATATTG+CGG + chr7_1:77816843-77816862 Msa1040430:intron 35.0%
! CAGCCGCAATATATAGATTT+TGG - chr7_1:77816794-77816813 None:intergenic 35.0%
AATTGCGGATACACGAAATT+TGG + chr7_1:77816870-77816889 Msa1040430:intron 35.0%
ATTGCGGATACACGAAATTT+GGG + chr7_1:77816871-77816890 Msa1040430:intron 35.0%
! AAACTGTTTTGTCGTAACGT+TGG + chr7_1:77816938-77816957 Msa1040430:intron 35.0%
! AACTGTTTTGTCGTAACGTT+GGG + chr7_1:77816939-77816958 Msa1040430:intron 35.0%
ATCAGGGAATTAATAGGGAA+AGG + chr7_1:77816973-77816992 Msa1040430:intron 35.0%
TCAGGGAATTAATAGGGAAA+GGG + chr7_1:77816974-77816993 Msa1040430:intron 35.0%
TTTGAAAGAAGACATCCTGT+CGG + chr7_1:77817016-77817035 Msa1040430:CDS 35.0%
!!! AGCTGAAAGGTACTTTTCTA+CGG + chr7_1:77817040-77817059 Msa1040430:intron 35.0%
TGGATATAAGATCCTTGTGA+CGG + chr7_1:77817158-77817177 Msa1040430:CDS 35.0%
TTCACAGAATCACATGATAC+CGG - chr7_1:77817222-77817241 None:intergenic 35.0%
AGTTTCACACATACCTCTAA+TGG - chr7_1:77817249-77817268 None:intergenic 35.0%
!!! TTCTTTTTTGTAGGTCTACG+AGG + chr7_1:77817334-77817353 Msa1040430:intron 35.0%
GAACACGTTCATAATCAACA+AGG - chr7_1:77817379-77817398 None:intergenic 35.0%
ATATCAAAATCCAGCTCCTT+AGG - chr7_1:77817422-77817441 None:intergenic 35.0%
!! GGAGCTGGATTTTGATATTT+TGG + chr7_1:77817424-77817443 Msa1040430:CDS 35.0%
GGTAGCATAAAACAAAAGAG+TGG - chr7_1:77817551-77817570 None:intergenic 35.0%
TCAGTTGAGTTTATTGGAAG+AGG + chr7_1:77818276-77818295 Msa1040430:intron 35.0%
! CTCTTTAGTTTATCTCCCAA+GGG + chr7_1:77818350-77818369 Msa1040430:intron 35.0%
!! ATGAACAAAAAAGCACCCTT+GGG - chr7_1:77818368-77818387 None:intergenic 35.0%
!! TATGAACAAAAAAGCACCCT+TGG - chr7_1:77818369-77818388 None:intergenic 35.0%
GTGCTCTCAAGTTATATGTT+TGG - chr7_1:77818457-77818476 None:intergenic 35.0%
! ACTTTTCTCACACTCATTAC+AGG - chr7_1:77818483-77818502 None:intergenic 35.0%
GCAATGCAACAATTGAATTG+AGG + chr7_1:77818503-77818522 Msa1040430:intron 35.0%
ACAATTGAATTGAGGACCAA+TGG + chr7_1:77818511-77818530 Msa1040430:intron 35.0%
AGTTGTAGTTGTACATTCCT+CGG + chr7_1:77818544-77818563 Msa1040430:intron 35.0%
TCCATTCTTTAACTGTGATG+AGG + chr7_1:77818569-77818588 Msa1040430:intron 35.0%
TTTGTCAATGGAAAATCCAC+TGG - chr7_1:77818798-77818817 None:intergenic 35.0%
GATTCCAAGAAGCAATTCTA+TGG + chr7_1:77818848-77818867 Msa1040430:CDS 35.0%
ATATGCAGTCATAAGAAGCT+TGG + chr7_1:77818944-77818963 Msa1040430:CDS 35.0%
TTTGCTAAAATTCTTCAGGG+TGG + chr7_1:77819042-77819061 Msa1040430:intron 35.0%
! TTTTAACGATTCCAATCTCG+TGG + chr7_1:77819128-77819147 Msa1040430:intron 35.0%
!!! TTCCTTTTTTGTGGAGTACT+TGG + chr7_1:77819362-77819381 Msa1040430:intron 35.0%
CGAATAATGCTGTAAAGTTC+AGG - chr7_1:77819498-77819517 None:intergenic 35.0%
AACTTTACAGCATTATTCGC+AGG + chr7_1:77819499-77819518 Msa1040430:intron 35.0%
AGTAAATGGCTCAGTTAATC+CGG - chr7_1:77819572-77819591 None:intergenic 35.0%
GAGTTATAAAGGGGAAAAAG+TGG - chr7_1:77819669-77819688 None:intergenic 35.0%
AATAAGTGTGAAATGAGCCA+AGG + chr7_1:77819759-77819778 Msa1040430:intron 35.0%
ATAAGTGTGAAATGAGCCAA+GGG + chr7_1:77819760-77819779 Msa1040430:intron 35.0%
CTCAATAGATATACATCCAC+AGG - chr7_1:77819842-77819861 None:intergenic 35.0%
AATCTTTCATATGTAGTCCG+AGG + chr7_1:77819946-77819965 Msa1040430:intron 35.0%
CCCAAGGATTTCATTAATAC+TGG - chr7_1:77819997-77820016 None:intergenic 35.0%
!! TCCTTGGGTTTATTGCTTTT+AGG + chr7_1:77820009-77820028 Msa1040430:intron 35.0%
ACCTAAAAGCAATAAACCCA+AGG - chr7_1:77820013-77820032 None:intergenic 35.0%
CATGTGCTAGTACACATATT+AGG + chr7_1:77820087-77820106 Msa1040430:intron 35.0%
GTTGCTAGATAGATTCTTCA+AGG + chr7_1:77820189-77820208 Msa1040430:intron 35.0%
! TTGGACAATCTTTACCGATT+GGG - chr7_1:77820253-77820272 None:intergenic 35.0%
CAAAGATATATGGAAGCTTC+TGG - chr7_1:77820297-77820316 None:intergenic 35.0%
GTTGCACAATCTTTACCAAT+TGG + chr7_1:77820372-77820391 Msa1040430:intron 35.0%
TTGTGAGTCATGCCAAATAA+CGG - chr7_1:77820418-77820437 None:intergenic 35.0%
AAGATAGCTGAATCATCTGA+TGG + chr7_1:77820514-77820533 Msa1040430:CDS 35.0%
! CCAGGAACTTTTCGAAAATT+AGG - chr7_1:77820670-77820689 None:intergenic 35.0%
! CCTAATTTTCGAAAAGTTCC+TGG + chr7_1:77820667-77820686 Msa1040430:CDS 35.0%
! ATCCAACCATTGATGGTATT+CGG + chr7_1:77820713-77820732 Msa1040430:CDS 35.0%
ACTGCAAATCCTATGAATGA+CGG - chr7_1:77820740-77820759 None:intergenic 35.0%
CATAGGATTTGCAGTACTAA+TGG + chr7_1:77820745-77820764 Msa1040430:CDS 35.0%
TCAACTTCACGAAGAACAAA+TGG - chr7_1:77820832-77820851 None:intergenic 35.0%
TACTCCAACATGTTCTTGTA+TGG - chr7_1:77820859-77820878 None:intergenic 35.0%
TTGAAATTATGAAAGGGGGA+TGG + chr7_1:77820918-77820937 Msa1040430:intron 35.0%
AGATTATTCTTTGGTTGGGA+GGG - chr7_1:77821105-77821124 None:intergenic 35.0%
CCATGAGATTATTCTTTGGT+TGG - chr7_1:77821110-77821129 None:intergenic 35.0%
CCAACCAAAGAATAATCTCA+TGG + chr7_1:77821107-77821126 Msa1040430:intron 35.0%
TTAGCATTCTAATTGGGAAG+TGG + chr7_1:77821134-77821153 Msa1040430:intron 35.0%
GTGGAATGAACGAAAATAAC+AGG - chr7_1:77821209-77821228 None:intergenic 35.0%
GGATCATCAAATGTTACGAA+GGG + chr7_1:77821283-77821302 Msa1040430:intron 35.0%
GATCATCAAATGTTACGAAG+GGG + chr7_1:77821284-77821303 Msa1040430:intron 35.0%
GTATATAAAAGCGGAAAGAC+GGG - chr7_1:77821354-77821373 None:intergenic 35.0%
CGTATATAAAAGCGGAAAGA+CGG - chr7_1:77821355-77821374 None:intergenic 35.0%
AATCAAGTGAGGGGTAATAT+TGG + chr7_1:77821399-77821418 Msa1040430:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr7_1:77821471-77821490 Msa1040430:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG + chr7_1:77821520-77821539 Msa1040430:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr7_1:77821526-77821545 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr7_1:77821526-77821545 Msa1040430:intron 35.0%
ATCTTATATAAAGGGCAACC+CGG - chr7_1:77821618-77821637 None:intergenic 35.0%
!!! AGGGAGTCAACTCTTTTTTT+GGG - chr7_1:77821820-77821839 None:intergenic 35.0%
!!! AAGGGAGTCAACTCTTTTTT+TGG - chr7_1:77821821-77821840 None:intergenic 35.0%
ACAATATAGCAGTGCCATAA+TGG + chr7_1:77822161-77822180 Msa1040430:CDS 35.0%
TGGTGTTTGAATCAAATCAG+AGG - chr7_1:77822238-77822257 None:intergenic 35.0%
TAATATTGCTTCTGCTGCAA+AGG + chr7_1:77822368-77822387 Msa1040430:CDS 35.0%
ATTGATATCACAGATGGGTA+GGG + chr7_1:77822530-77822549 Msa1040430:CDS 35.0%
! GAGAAACAAAACCGTGTTTT+TGG + chr7_1:77822738-77822757 Msa1040430:CDS 35.0%
GGCACCATTATCAAATAATG+TGG - chr7_1:77822796-77822815 None:intergenic 35.0%
ATGCTGCAAAAGCAATTAGA+CGG - chr7_1:77822983-77823002 None:intergenic 35.0%
!! ATTGCTTTTGCAGCATATCT+TGG + chr7_1:77822987-77823006 Msa1040430:CDS 35.0%
GAAATCCAGAATGACATTCA+AGG + chr7_1:77823043-77823062 Msa1040430:CDS 35.0%
AGCACCTTTAATATGTTCGA+TGG + chr7_1:77823498-77823517 Msa1040430:intron 35.0%
!!! TGTGAGAGTGTCATTTTTTC+AGG + chr7_1:77823975-77823994 Msa1040430:intron 35.0%
!!! GTGTCATTTTTTCAGGTTGA+TGG + chr7_1:77823982-77824001 Msa1040430:intron 35.0%
AACTGCTTCTTCTCTTACAT+CGG - chr7_1:77824118-77824137 None:intergenic 35.0%
TAATTGTGTTGCACAACTCA+TGG + chr7_1:77824273-77824292 Msa1040430:intron 35.0%
TTGAGGGATCATATTCTTCA+CGG - chr7_1:77824390-77824409 None:intergenic 35.0%
!! ACAGTAGACTGATTTGTTGA+GGG - chr7_1:77824406-77824425 None:intergenic 35.0%
GATATGATATTGTCTATCGG+AGG + chr7_1:77824503-77824522 Msa1040430:CDS 35.0%
AAACCATGACAAGAATCCAA+TGG - chr7_1:77824779-77824798 None:intergenic 35.0%
AATTGCAGTGAATGCAATAG+TGG + chr7_1:77824834-77824853 Msa1040430:intron 35.0%
GCCATAATCTGTATTAGACT+TGG + chr7_1:77825046-77825065 Msa1040430:CDS 35.0%
TATGTATCAGGACCAAATGA+TGG - chr7_1:77825106-77825125 None:intergenic 35.0%
CTTCTAATGAAACAGCACTT+AGG + chr7_1:77825158-77825177 Msa1040430:CDS 35.0%
TAATGAAACAGCACTTAGGA+TGG + chr7_1:77825162-77825181 Msa1040430:CDS 35.0%
AATGAAACAGCACTTAGGAT+GGG + chr7_1:77825163-77825182 Msa1040430:CDS 35.0%
!! TCAACATCTGATTTGCTTTG+GGG - chr7_1:77825235-77825254 None:intergenic 35.0%
!! GTCAACATCTGATTTGCTTT+GGG - chr7_1:77825236-77825255 None:intergenic 35.0%
!! TGTCAACATCTGATTTGCTT+TGG - chr7_1:77825237-77825256 None:intergenic 35.0%
GAAAATGCATTCAACATCAG+TGG + chr7_1:77825310-77825329 Msa1040430:intron 35.0%
!!! GTCTTTTTTCCCTTTTTGTG+TGG + chr7_1:77825391-77825410 Msa1040430:intron 35.0%
! TTTTTCCCTTTTTGTGTGGA+AGG + chr7_1:77825395-77825414 Msa1040430:intron 35.0%
! CTTTTGCACCATTTATTCAC+CGG + chr7_1:77825529-77825548 Msa1040430:intron 35.0%
! TTTTGCACCATTTATTCACC+GGG + chr7_1:77825530-77825549 Msa1040430:intron 35.0%
! CGTGCATATCTTTTTGACAT+GGG + chr7_1:77825719-77825738 Msa1040430:CDS 35.0%
! TCTTTTTGACATGGGTATCA+AGG + chr7_1:77825727-77825746 Msa1040430:CDS 35.0%
TATGCTGCTGTGCTTATATA+TGG + chr7_1:77825865-77825884 Msa1040430:intron 35.0%
AAGTTTAAGTGTGCACCATA+AGG + chr7_1:77826241-77826260 Msa1040430:intron 35.0%
GATACGATCTGAATGTGATA+AGG - chr7_1:77826316-77826335 None:intergenic 35.0%
TTACATAGATGACTAAGCTC+GGG - chr7_1:77826392-77826411 None:intergenic 35.0%
GTTACATAGATGACTAAGCT+CGG - chr7_1:77826393-77826412 None:intergenic 35.0%
CTTCTGATCACATACAGTAT+GGG - chr7_1:77826629-77826648 None:intergenic 35.0%
ACTTCTGATCACATACAGTA+TGG - chr7_1:77826630-77826649 None:intergenic 35.0%
TACTGTATGTGATCAGAAGT+TGG + chr7_1:77826630-77826649 Msa1040430:three_prime_UTR 35.0%
! TTGGTGGTCAAAGTATTCAT+TGG + chr7_1:77826742-77826761 Msa1040430:three_prime_UTR 35.0%
! TGGTGGTCAAAGTATTCATT+GGG + chr7_1:77826743-77826762 Msa1040430:three_prime_UTR 35.0%
GGAATGAGAATACAATCAGT+TGG - chr7_1:77826819-77826838 None:intergenic 35.0%
!!! AGACGTTTGTTTTGACAACC+AGG - chr7_1:77816057-77816076 None:intergenic 40.0%
TTCTGATTCCATCAACGGTT+GGG - chr7_1:77816149-77816168 None:intergenic 40.0%
TTTCTGATTCCATCAACGGT+TGG - chr7_1:77816150-77816169 None:intergenic 40.0%
!! GATTAGTCTTCGTGAAGAAC+CGG + chr7_1:77816218-77816237 Msa1040430:CDS 40.0%
TCAACATCACGCAGAACAAA+TGG - chr7_1:77816349-77816368 None:intergenic 40.0%
ATTCTCCAACCTCGAGTATA+CGG + chr7_1:77816375-77816394 Msa1040430:CDS 40.0%
ATATACCGTATACTCGAGGT+TGG - chr7_1:77816383-77816402 None:intergenic 40.0%
GCAGTACTTGTGACATTGTT+TGG + chr7_1:77816579-77816598 Msa1040430:intron 40.0%
ATATATTGCGGCTGCAATTG+CGG + chr7_1:77816800-77816819 Msa1040430:intron 40.0%
TTGCGGATACACGAAATTTG+GGG + chr7_1:77816872-77816891 Msa1040430:intron 40.0%
TTGGGACTTGTACTCAATCA+GGG + chr7_1:77816957-77816976 Msa1040430:intron 40.0%
TAGGGAAAGGGTTGAACAAA+TGG + chr7_1:77816986-77817005 Msa1040430:CDS 40.0%
TTCTGTGAAGACACCATTAG+AGG + chr7_1:77817233-77817252 Msa1040430:CDS 40.0%
TGAAAAATCACCTAAGGAGC+TGG + chr7_1:77817409-77817428 Msa1040430:CDS 40.0%
TCAGATTGTGATGCTTACGA+TGG - chr7_1:77817572-77817591 None:intergenic 40.0%
!!! AATTTTTTGTCCTGTCGTGG+TGG + chr7_1:77817643-77817662 Msa1040430:intron 40.0%
!!! ATTTTTTGTCCTGTCGTGGT+GGG + chr7_1:77817644-77817663 Msa1040430:intron 40.0%
TTTAATTGTCAAATGGGGCG+TGG + chr7_1:77817851-77817870 Msa1040430:CDS 40.0%
CAAAGTTGCGATAACCATTC+CGG - chr7_1:77817888-77817907 None:intergenic 40.0%
TTGGTCTACCTCAATCGAAT+TGG + chr7_1:77817905-77817924 Msa1040430:CDS 40.0%
CCATGTGCCTCAAATTACAT+TGG - chr7_1:77818212-77818231 None:intergenic 40.0%
! CCAATGTAATTTGAGGCACA+TGG + chr7_1:77818209-77818228 Msa1040430:intron 40.0%
CTCAACTGACAACAACATCA+TGG - chr7_1:77818265-77818284 None:intergenic 40.0%
! GCTCTTTAGTTTATCTCCCA+AGG + chr7_1:77818349-77818368 Msa1040430:intron 40.0%
ATTTGTCCAACTAGTGCTCT+AGG + chr7_1:77818409-77818428 Msa1040430:intron 40.0%
TTTGTCCAACTAGTGCTCTA+GGG + chr7_1:77818410-77818429 Msa1040430:intron 40.0%
GCCTCATCACAGTTAAAGAA+TGG - chr7_1:77818573-77818592 None:intergenic 40.0%
!!! CAATTTTAATTCCCAGCGGT+GGG - chr7_1:77818678-77818697 None:intergenic 40.0%
!!! TCAATTTTAATTCCCAGCGG+TGG - chr7_1:77818679-77818698 None:intergenic 40.0%
GAAAGAGATGGCATAATGCT+AGG - chr7_1:77818710-77818729 None:intergenic 40.0%
TAAATCATAAGGCGTACCAG+TGG + chr7_1:77818779-77818798 Msa1040430:intron 40.0%
CTACCCATAGAATTGCTTCT+TGG - chr7_1:77818855-77818874 None:intergenic 40.0%
CAGTCATAAGAAGCTTGGTT+CGG + chr7_1:77818949-77818968 Msa1040430:CDS 40.0%
AGTCATAAGAAGCTTGGTTC+GGG + chr7_1:77818950-77818969 Msa1040430:CDS 40.0%
TGACAAATGTGCTTCAATGC+AGG + chr7_1:77819098-77819117 Msa1040430:CDS 40.0%
CAGAATTTGCGTGAAGCAAT+TGG + chr7_1:77819282-77819301 Msa1040430:intron 40.0%
ACAGCCAGATGAGATGAAAA+AGG + chr7_1:77819329-77819348 Msa1040430:CDS 40.0%
!!! GGCATCACTTTCCTTTTTTG+TGG + chr7_1:77819353-77819372 Msa1040430:CDS 40.0%
CTCCAAGTACTCCACAAAAA+AGG - chr7_1:77819367-77819386 None:intergenic 40.0%
GGAAAAACTACTTTGACCAG+CGG - chr7_1:77819457-77819476 None:intergenic 40.0%
TTTCCAATTGGATGAGAGCA+AGG + chr7_1:77819472-77819491 Msa1040430:intron 40.0%
GTAAATGGCTCAGTTAATCC+GGG - chr7_1:77819571-77819590 None:intergenic 40.0%
AGCCAAGGGCTCAATTAATT+CGG + chr7_1:77819774-77819793 Msa1040430:intron 40.0%
ATTTCTCTTCATTAGGCCTG+TGG + chr7_1:77819823-77819842 Msa1040430:intron 40.0%
TCCTGATCACCCATATAACT+TGG + chr7_1:77819969-77819988 Msa1040430:intron 40.0%
ACCAAGTTATATGGGTGATC+AGG - chr7_1:77819973-77819992 None:intergenic 40.0%
GCTATGATGCTTAGGTATGT+AGG + chr7_1:77820149-77820168 Msa1040430:intron 40.0%
TGATGCTTAGGTATGTAGGA+AGG + chr7_1:77820153-77820172 Msa1040430:intron 40.0%
GTTGGACAATCTTTACCGAT+TGG - chr7_1:77820254-77820273 None:intergenic 40.0%
TCACACACAAGGTACATTGT+TGG - chr7_1:77820272-77820291 None:intergenic 40.0%
TTGGCATGACTCACAACAAT+CGG + chr7_1:77820422-77820441 Msa1040430:intron 40.0%
TTACTCAGGAGAGATCCAAT+GGG + chr7_1:77820454-77820473 Msa1040430:CDS 40.0%
AATGTTGCTGCCTTGAGAAA+AGG + chr7_1:77820556-77820575 Msa1040430:CDS 40.0%
! AAGAACTTCGCCTTTTCTCA+AGG - chr7_1:77820569-77820588 None:intergenic 40.0%
TTGAGAAAAGGCGAAGTTCT+TGG + chr7_1:77820568-77820587 Msa1040430:CDS 40.0%
! GTTCCTGGATTTCCAGTTTT+TGG + chr7_1:77820682-77820701 Msa1040430:CDS 40.0%
ACACCAAAAACTGGAAATCC+AGG - chr7_1:77820688-77820707 None:intergenic 40.0%
GGATTTGCAACACCAAAAAC+TGG - chr7_1:77820697-77820716 None:intergenic 40.0%
GTTGCAAATCCAACCATTGA+TGG + chr7_1:77820706-77820725 Msa1040430:CDS 40.0%
AGGATTTGCAGTACTAATGG+TGG + chr7_1:77820748-77820767 Msa1040430:CDS 40.0%
ACGACCATACAAGAACATGT+TGG + chr7_1:77820852-77820871 Msa1040430:CDS 40.0%
CAAGAACATGTTGGAGTACA+CGG + chr7_1:77820861-77820880 Msa1040430:CDS 40.0%
TACTAGTTAGCAGGAACCAT+TGG + chr7_1:77821039-77821058 Msa1040430:intron 40.0%
GAGATTATTCTTTGGTTGGG+AGG - chr7_1:77821106-77821125 None:intergenic 40.0%
CTAGTTAAGACGTGTGAGAA+AGG + chr7_1:77821162-77821181 Msa1040430:intron 40.0%
TTAAGACGTGTGAGAAAGGA+AGG + chr7_1:77821166-77821185 Msa1040430:intron 40.0%
TAAGACGTGTGAGAAAGGAA+GGG + chr7_1:77821167-77821186 Msa1040430:intron 40.0%
GGGATCATCAAATGTTACGA+AGG + chr7_1:77821282-77821301 Msa1040430:intron 40.0%
!! GAAGGGGTATCTACTTTATG+AGG + chr7_1:77821300-77821319 Msa1040430:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG - chr7_1:77821515-77821534 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr7_1:77821552-77821571 Msa1040430:intron 40.0%
! AGTTGACTCCCTTTATGCAT+TGG + chr7_1:77821828-77821847 Msa1040430:intron 40.0%
TAACTATGAGTTGTGCAGCT+TGG + chr7_1:77821920-77821939 Msa1040430:intron 40.0%
CTGTGAAAGAGTGGAGAAAA+TGG + chr7_1:77822101-77822120 Msa1040430:CDS 40.0%
TTCAAAAGCTTGGAAGCTGA+AGG + chr7_1:77822267-77822286 Msa1040430:CDS 40.0%
TCAAAAGCTTGGAAGCTGAA+GGG + chr7_1:77822268-77822287 Msa1040430:CDS 40.0%
GGTACACGTGCATACTTAAT+GGG - chr7_1:77822297-77822316 None:intergenic 40.0%
AATGTCAAAGTCAGAACGCT+CGG - chr7_1:77822340-77822359 None:intergenic 40.0%
! GCGTTCTGACTTTGACATTT+TGG + chr7_1:77822341-77822360 Msa1040430:CDS 40.0%
CATTGATATCACAGATGGGT+AGG + chr7_1:77822529-77822548 Msa1040430:CDS 40.0%
TTGATATCACAGATGGGTAG+GGG + chr7_1:77822531-77822550 Msa1040430:CDS 40.0%
! AATCCACGCGAAGTTTTACA+AGG - chr7_1:77822587-77822606 None:intergenic 40.0%
! GTAAAACTTCGCGTGGATTT+TGG + chr7_1:77822588-77822607 Msa1040430:CDS 40.0%
ACCCAAGAAGAATCAAATGG+CGG + chr7_1:77822642-77822661 Msa1040430:CDS 40.0%
ACCGCCATTTGATTCTTCTT+GGG - chr7_1:77822646-77822665 None:intergenic 40.0%
AACCGCCATTTGATTCTTCT+TGG - chr7_1:77822647-77822666 None:intergenic 40.0%
TCAAGTGGAGATGAAGCTTT+AGG + chr7_1:77822669-77822688 Msa1040430:CDS 40.0%
! TTGGAAGCGAAGCATTTGAT+GGG + chr7_1:77823006-77823025 Msa1040430:CDS 40.0%
!!! GAAGCATTTGATGGGTTTTG+TGG + chr7_1:77823014-77823033 Msa1040430:CDS 40.0%
!!! TTTGATGGGTTTTGTGGACA+AGG + chr7_1:77823020-77823039 Msa1040430:CDS 40.0%
!!! TTGATGGGTTTTGTGGACAA+GGG + chr7_1:77823021-77823040 Msa1040430:CDS 40.0%
CCAAACCTTGAATGTCATTC+TGG - chr7_1:77823051-77823070 None:intergenic 40.0%
CCAGAATGACATTCAAGGTT+TGG + chr7_1:77823048-77823067 Msa1040430:CDS 40.0%
TCTACTGTCAATGCCAGAAA+CGG + chr7_1:77823274-77823293 Msa1040430:CDS 40.0%
TTATTGGAAGTTCTCTGTCC+AGG - chr7_1:77823343-77823362 None:intergenic 40.0%
ATCATCATCTGTGATACCAG+AGG + chr7_1:77823436-77823455 Msa1040430:intron 40.0%
TCATCATCTGTGATACCAGA+GGG + chr7_1:77823437-77823456 Msa1040430:intron 40.0%
CAGATAGTTTAGCATCTCCT+TGG - chr7_1:77824049-77824068 None:intergenic 40.0%
CAAGGAGATGCTAAACTATC+TGG + chr7_1:77824047-77824066 Msa1040430:CDS 40.0%
TGGATGCTAAGTCTAAACCT+GGG + chr7_1:77824067-77824086 Msa1040430:CDS 40.0%
TTTAACTCCCTGTGGACAAA+GGG - chr7_1:77824159-77824178 None:intergenic 40.0%
ACGTGTTTGAGTGTATCAAC+AGG - chr7_1:77824186-77824205 None:intergenic 40.0%
GTTGATACACTCAAACACGT+CGG + chr7_1:77824186-77824205 Msa1040430:CDS 40.0%
!! CACAGTAGACTGATTTGTTG+AGG - chr7_1:77824407-77824426 None:intergenic 40.0%
CTCAACAAATCAGTCTACTG+TGG + chr7_1:77824405-77824424 Msa1040430:CDS 40.0%
ACAAATCAGTCTACTGTGGT+TGG + chr7_1:77824409-77824428 Msa1040430:CDS 40.0%
TGGATACTGGGAAAACATTC+TGG + chr7_1:77824429-77824448 Msa1040430:CDS 40.0%
GCATCTCTCTCTCTTGTTAA+GGG - chr7_1:77824532-77824551 None:intergenic 40.0%
! TCTCCCTACTTGGTAGTATA+TGG + chr7_1:77824599-77824618 Msa1040430:intron 40.0%
! CTCCCTACTTGGTAGTATAT+GGG + chr7_1:77824600-77824619 Msa1040430:intron 40.0%
GACCCATATACTACCAAGTA+GGG - chr7_1:77824605-77824624 None:intergenic 40.0%
AGACCCATATACTACCAAGT+AGG - chr7_1:77824606-77824625 None:intergenic 40.0%
CAGTGACGCAACAAAAATGT+TGG - chr7_1:77824640-77824659 None:intergenic 40.0%
! CAACATTTTTGTTGCGTCAC+TGG + chr7_1:77824638-77824657 Msa1040430:intron 40.0%
! AGAATCCAATGGCTGCATTT+TGG - chr7_1:77824768-77824787 None:intergenic 40.0%
! TTGAGTCTGCAGTTTCTAGA+TGG - chr7_1:77824897-77824916 None:intergenic 40.0%
! TTGCTTTATTGTAGCTCTGC+AGG + chr7_1:77824971-77824990 Msa1040430:intron 40.0%
! TGCTTTATTGTAGCTCTGCA+GGG + chr7_1:77824972-77824991 Msa1040430:intron 40.0%
! TTTGTATCGCACACAGGTTT+TGG + chr7_1:77825004-77825023 Msa1040430:CDS 40.0%
AAATGATGGCTGCAGTACTT+TGG - chr7_1:77825092-77825111 None:intergenic 40.0%
!! AAAGTACTGCAGCCATCATT+TGG + chr7_1:77825091-77825110 Msa1040430:CDS 40.0%
TCAGTCACTGCATATGTATC+AGG - chr7_1:77825118-77825137 None:intergenic 40.0%
TGAAGCCTTCCACACAAAAA+GGG - chr7_1:77825403-77825422 None:intergenic 40.0%
TTGAAGCCTTCCACACAAAA+AGG - chr7_1:77825404-77825423 None:intergenic 40.0%
TTTGCACCATTTATTCACCG+GGG + chr7_1:77825531-77825550 Msa1040430:intron 40.0%
AAACTTCCCCGGTGAATAAA+TGG - chr7_1:77825540-77825559 None:intergenic 40.0%
! GCGTGCATATCTTTTTGACA+TGG + chr7_1:77825718-77825737 Msa1040430:CDS 40.0%
! TGCTTATATATGGTAGCGTG+TGG + chr7_1:77825875-77825894 Msa1040430:intron 40.0%
! GCTTATATATGGTAGCGTGT+GGG + chr7_1:77825876-77825895 Msa1040430:intron 40.0%
!! CAAGATCACCCATTTTAAGG+TGG - chr7_1:77826149-77826168 None:intergenic 40.0%
! GTGCAAGATCACCCATTTTA+AGG - chr7_1:77826152-77826171 None:intergenic 40.0%
!! CATATTTGTTTTCCTCCAGG+CGG + chr7_1:77826282-77826301 Msa1040430:intron 40.0%
TCCAGCAAATTCTGTATCGT+CGG - chr7_1:77826354-77826373 None:intergenic 40.0%
!! ACGATACAGAATTTGCTGGA+TGG + chr7_1:77826354-77826373 Msa1040430:CDS 40.0%
!! TACAGAATTTGCTGGATGGA+TGG + chr7_1:77826358-77826377 Msa1040430:CDS 40.0%
TGACCACAACTTACAAGCAT+CGG - chr7_1:77826441-77826460 None:intergenic 40.0%
AGCAAATGCCAACTGTACAT+CGG - chr7_1:77826466-77826485 None:intergenic 40.0%
ATACGGGTAGAAGAGGTTAT+AGG - chr7_1:77826504-77826523 None:intergenic 40.0%
! GGGGCTTTGTGTACAAAATA+AGG - chr7_1:77826536-77826555 None:intergenic 40.0%
TAGCGAGTTGTTACACTTAG+GGG - chr7_1:77826555-77826574 None:intergenic 40.0%
GTAGCGAGTTGTTACACTTA+GGG - chr7_1:77826556-77826575 None:intergenic 40.0%
AGTAGCGAGTTGTTACACTT+AGG - chr7_1:77826557-77826576 None:intergenic 40.0%
TATTCATTGGGAGACCTGTT+AGG + chr7_1:77826755-77826774 Msa1040430:three_prime_UTR 40.0%
TGTGCAACCTAATACCTAAC+AGG - chr7_1:77826772-77826791 None:intergenic 40.0%
! GTATTAGGTTGCACAGCTAA+GGG + chr7_1:77826777-77826796 Msa1040430:three_prime_UTR 40.0%
! GTTCTCCGCATTTTCTGCAT+TGG + chr7_1:77815918-77815937 Msa1040430:intron 45.0%
AAGAGTAGTGAAGGAACCAG+AGG + chr7_1:77815966-77815985 Msa1040430:CDS 45.0%
! CTGAAGAGTGACCATTTTCC+TGG + chr7_1:77816036-77816055 Msa1040430:CDS 45.0%
GAGTCAGCACGACGATAATT+AGG - chr7_1:77816102-77816121 None:intergenic 45.0%
! GCTGACTCTTTGCATGTTCA+TGG + chr7_1:77816114-77816133 Msa1040430:CDS 45.0%
GTATACTCGAGGTTGGAGAA+TGG - chr7_1:77816376-77816395 None:intergenic 45.0%
AAAGATCCTCTCAAGCTCTC+AGG - chr7_1:77816475-77816494 None:intergenic 45.0%
GTTGGGACTTGTACTCAATC+AGG + chr7_1:77816956-77816975 Msa1040430:intron 45.0%
TTTGTCGCTACCTTGTCTTG+CGG + chr7_1:77817075-77817094 Msa1040430:intron 45.0%
ACCTTGTCTTGCGGAATTCA+TGG + chr7_1:77817084-77817103 Msa1040430:intron 45.0%
ACCATGAATTCCGCAAGACA+AGG - chr7_1:77817088-77817107 None:intergenic 45.0%
TACGAGGAATTGCAAGTGGA+GGG + chr7_1:77817350-77817369 Msa1040430:CDS 45.0%
CTGCTGATAGACAATCCTCA+AGG + chr7_1:77817668-77817687 Msa1040430:intron 45.0%
CGGAATGGTTATCGCAACTT+TGG + chr7_1:77817886-77817905 Msa1040430:CDS 45.0%
GAGTTTATTGGAAGAGGAGC+AGG + chr7_1:77818282-77818301 Msa1040430:intron 45.0%
TTGTCCAACTAGTGCTCTAG+GGG + chr7_1:77818411-77818430 Msa1040430:intron 45.0%
CAGTTAAAGAATGGATGCCG+AGG - chr7_1:77818564-77818583 None:intergenic 45.0%
TATACTGTAAATCCCACCGC+TGG + chr7_1:77818663-77818682 Msa1040430:intron 45.0%
ATACTGTAAATCCCACCGCT+GGG + chr7_1:77818664-77818683 Msa1040430:intron 45.0%
TGACCATTTGCCTAACTCAG+AGG + chr7_1:77818902-77818921 Msa1040430:CDS 45.0%
! ATTCTTCAGGGTGGTGTTGA+CGG + chr7_1:77819051-77819070 Msa1040430:intron 45.0%
CCACCCACAAGATACAAAGA+AGG - chr7_1:77819212-77819231 None:intergenic 45.0%
CCTTCTTTGTATCTTGTGGG+TGG + chr7_1:77819209-77819228 Msa1040430:intron 45.0%
TCGCAGAATGCTATTGCGAT+AGG - chr7_1:77819310-77819329 None:intergenic 45.0%
GCCAGATGAGATGAAAAAGG+AGG + chr7_1:77819332-77819351 Msa1040430:CDS 45.0%
!! GCCTCCTTTTTCATCTCATC+TGG - chr7_1:77819336-77819355 None:intergenic 45.0%
! ATACTCCTTTCTAGTACCGC+TGG + chr7_1:77819438-77819457 Msa1040430:intron 45.0%
TTTGACCAGCGGTACTAGAA+AGG - chr7_1:77819446-77819465 None:intergenic 45.0%
GCCAAGGGCTCAATTAATTC+GGG + chr7_1:77819775-77819794 Msa1040430:intron 45.0%
TCCCGAATTAATTGAGCCCT+TGG - chr7_1:77819779-77819798 None:intergenic 45.0%
AGGGCTCAATTAATTCGGGA+CGG + chr7_1:77819779-77819798 Msa1040430:intron 45.0%
CTCAATTAATTCGGGACGGA+GGG + chr7_1:77819783-77819802 Msa1040430:intron 45.0%
TATATGGGTGATCAGGACCT+CGG - chr7_1:77819966-77819985 None:intergenic 45.0%
GTTACTCAGGAGAGATCCAA+TGG + chr7_1:77820453-77820472 Msa1040430:CDS 45.0%
GAATATCCAAGTGCACCCAT+TGG - chr7_1:77820472-77820491 None:intergenic 45.0%
TAGCTGAATCATCTGATGGC+CGG + chr7_1:77820518-77820537 Msa1040430:CDS 45.0%
GCAACATTACCCATCTCAGA+TGG - chr7_1:77820544-77820563 None:intergenic 45.0%
CTTAAAAGCGATCACTGTCC+TGG + chr7_1:77820604-77820623 Msa1040430:CDS 45.0%
!! AAACTCGGATTTTGGCATCC+AGG - chr7_1:77820625-77820644 None:intergenic 45.0%
ATGCCAAAATCCGAGTTTGC+CGG + chr7_1:77820627-77820646 Msa1040430:CDS 45.0%
GACCGAATACCATCAATGGT+TGG - chr7_1:77820718-77820737 None:intergenic 45.0%
GTATTCGGTCCGTCATTCAT+AGG + chr7_1:77820728-77820747 Msa1040430:CDS 45.0%
!! ATGGTGGATGCCCAATACTT+TGG + chr7_1:77820764-77820783 Msa1040430:CDS 45.0%
ATATGTAACCTTGGCGCAAC+TGG + chr7_1:77821448-77821467 Msa1040430:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr7_1:77821475-77821494 Msa1040430:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr7_1:77821548-77821567 Msa1040430:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr7_1:77821551-77821570 Msa1040430:intron 45.0%
GCTGCACAACTCATAGTTAG+AGG - chr7_1:77821919-77821938 None:intergenic 45.0%
!! GGGTATTGACTGTGAAAGAG+TGG + chr7_1:77822092-77822111 Msa1040430:intron 45.0%
GGGTACACGTGCATACTTAA+TGG - chr7_1:77822298-77822317 None:intergenic 45.0%
ATGTCAAAGTCAGAACGCTC+GGG - chr7_1:77822339-77822358 None:intergenic 45.0%
!! AACTTCGCGTGGATTTTGGT+AGG + chr7_1:77822592-77822611 Msa1040430:CDS 45.0%
TCAAATGGCGGTTCTTCAAG+TGG + chr7_1:77822654-77822673 Msa1040430:CDS 45.0%
! TAACAGCATCTAAGGCCTCT+CGG - chr7_1:77822824-77822843 None:intergenic 45.0%
! CTTGGAAGCGAAGCATTTGA+TGG + chr7_1:77823005-77823024 Msa1040430:CDS 45.0%
! TCAAGGTTTGGTTGCATCAG+AGG + chr7_1:77823060-77823079 Msa1040430:CDS 45.0%
CATTTCATAGCCTGTACCTC+TGG - chr7_1:77823086-77823105 None:intergenic 45.0%
! CAGAGGTACAGGCTATGAAA+TGG + chr7_1:77823084-77823103 Msa1040430:CDS 45.0%
! ATGGAGCATCAGATCAAGAC+CGG + chr7_1:77823103-77823122 Msa1040430:CDS 45.0%
GAATCACAAGAGTCTCAGCA+TGG + chr7_1:77823235-77823254 Msa1040430:CDS 45.0%
! TGCCAGAAACGGTTCTGTTT+TGG + chr7_1:77823285-77823304 Msa1040430:CDS 45.0%
! GCCAGAAACGGTTCTGTTTT+GGG + chr7_1:77823286-77823305 Msa1040430:CDS 45.0%
! CCAGAAACGGTTCTGTTTTG+GGG + chr7_1:77823287-77823306 Msa1040430:CDS 45.0%
!!! AAACGGTTCTGTTTTGGGGA+AGG + chr7_1:77823291-77823310 Msa1040430:CDS 45.0%
!!! AACGGTTCTGTTTTGGGGAA+GGG + chr7_1:77823292-77823311 Msa1040430:CDS 45.0%
TGGTGCACCTCATGTTTACA+AGG + chr7_1:77823375-77823394 Msa1040430:CDS 45.0%
ATCTGTGATACCAGAGGGTA+AGG + chr7_1:77823442-77823461 Msa1040430:intron 45.0%
CGAAAAAATGCTGTCTGGTG+TGG + chr7_1:77823534-77823553 Msa1040430:intron 45.0%
TGGATACCCTGTATGTTGCA+TGG + chr7_1:77824002-77824021 Msa1040430:CDS 45.0%
GAGTTGCCATGCAACATACA+GGG - chr7_1:77824011-77824030 None:intergenic 45.0%
CTGGATGCTAAGTCTAAACC+TGG + chr7_1:77824066-77824085 Msa1040430:CDS 45.0%
ATTGTGTTCCCTTTGTCCAC+AGG + chr7_1:77824148-77824167 Msa1040430:CDS 45.0%
TTGTGTTCCCTTTGTCCACA+GGG + chr7_1:77824149-77824168 Msa1040430:CDS 45.0%
GTTTAACTCCCTGTGGACAA+AGG - chr7_1:77824160-77824179 None:intergenic 45.0%
! CAGGTTTGTTTAACTCCCTG+TGG - chr7_1:77824167-77824186 None:intergenic 45.0%
AGGTTGAACACATGGAAGCA+CGG + chr7_1:77824308-77824327 Msa1040430:intron 45.0%
CTGAGATTAGACAGTCTGGT+GGG + chr7_1:77824350-77824369 Msa1040430:CDS 45.0%
AGTCTACTGTGGTTGGATAC+TGG + chr7_1:77824416-77824435 Msa1040430:CDS 45.0%
GTCTACTGTGGTTGGATACT+GGG + chr7_1:77824417-77824436 Msa1040430:CDS 45.0%
GGCATCTCTCTCTCTTGTTA+AGG - chr7_1:77824533-77824552 None:intergenic 45.0%
! CTGTATTGCATCGACATCAG+AGG - chr7_1:77824560-77824579 None:intergenic 45.0%
GATGAGTAAGTCTCCCTACT+TGG + chr7_1:77824589-77824608 Msa1040430:intron 45.0%
TTGCTCCAAAATGCAGCCAT+TGG + chr7_1:77824760-77824779 Msa1040430:intron 45.0%
CAGCCATTGGATTCTTGTCA+TGG + chr7_1:77824773-77824792 Msa1040430:intron 45.0%
ATGGTATGCACAGACATGTG+GGG - chr7_1:77824878-77824897 None:intergenic 45.0%
GATGGTATGCACAGACATGT+GGG - chr7_1:77824879-77824898 None:intergenic 45.0%
AGATGGTATGCACAGACATG+TGG - chr7_1:77824880-77824899 None:intergenic 45.0%
TACCTCTTTGTATCGCACAC+AGG + chr7_1:77824998-77825017 Msa1040430:CDS 45.0%
AACCTGTGTGCGATACAAAG+AGG - chr7_1:77825003-77825022 None:intergenic 45.0%
TGGTGGAGTTGCATATGCAA+TGG + chr7_1:77825024-77825043 Msa1040430:CDS 45.0%
!! CTGTATTAGACTTGGTGCAG+AGG + chr7_1:77825054-77825073 Msa1040430:CDS 45.0%
CATGTACGAGGACTCTTGTA+AGG - chr7_1:77825210-77825229 None:intergenic 45.0%
CTTACAAGAGTCCTCGTACA+TGG + chr7_1:77825208-77825227 Msa1040430:CDS 45.0%
TGGAAGGCTTCAACCCAAAA+AGG + chr7_1:77825411-77825430 Msa1040430:intron 45.0%
GGAAGGCTTCAACCCAAAAA+GGG + chr7_1:77825412-77825431 Msa1040430:intron 45.0%
GCTTCAACCCAAAAAGGGAA+AGG + chr7_1:77825417-77825436 Msa1040430:intron 45.0%
CAACCCAAAAAGGGAAAGGA+CGG + chr7_1:77825421-77825440 Msa1040430:intron 45.0%
AACCCAAAAAGGGAAAGGAC+GGG + chr7_1:77825422-77825441 Msa1040430:intron 45.0%
TTTAATAGATGTGCAGGCGC+AGG + chr7_1:77825626-77825645 Msa1040430:intron 45.0%
ACATGGGTATCAAGGCTTTG+AGG + chr7_1:77825735-77825754 Msa1040430:CDS 45.0%
AAGCACAGCAGCATATGCAA+GGG - chr7_1:77825860-77825879 None:intergenic 45.0%
TAAGCACAGCAGCATATGCA+AGG - chr7_1:77825861-77825880 None:intergenic 45.0%
!! GATAAGGAAAAAGTACCGCC+TGG - chr7_1:77826300-77826319 None:intergenic 45.0%
CCAGCAAATTCTGTATCGTC+GGG - chr7_1:77826353-77826372 None:intergenic 45.0%
ATGCCGATGCTTGTAAGTTG+TGG + chr7_1:77826435-77826454 Msa1040430:three_prime_UTR 45.0%
TTGTGCAATACGGGTAGAAG+AGG - chr7_1:77826511-77826530 None:intergenic 45.0%
ACTACGAGATGCTACTCTTG+CGG - chr7_1:77826596-77826615 None:intergenic 45.0%
! CAGAAGTTGGCTCAGATACA+AGG + chr7_1:77826643-77826662 Msa1040430:three_prime_UTR 45.0%
TGGGAGACCTGTTAGGTATT+AGG + chr7_1:77826762-77826781 Msa1040430:three_prime_UTR 45.0%
! GGTATTAGGTTGCACAGCTA+AGG + chr7_1:77826776-77826795 Msa1040430:three_prime_UTR 45.0%
! CTCCGCATTTTCTGCATTGG+TGG + chr7_1:77815921-77815940 Msa1040430:intron 50.0%
CGCCACCAATGCAGAAAATG+CGG - chr7_1:77815926-77815945 None:intergenic 50.0%
AGCGATGGCAAGAGTAGTGA+AGG + chr7_1:77815957-77815976 Msa1040430:exon 50.0%
CGCATTCTCATCACTTCCTC+TGG - chr7_1:77815985-77816004 None:intergenic 50.0%
GAGGAAGTGATGAGAATGCG+AGG + chr7_1:77815985-77816004 Msa1040430:CDS 50.0%
GAAGTGATGAGAATGCGAGG+AGG + chr7_1:77815988-77816007 Msa1040430:CDS 50.0%
CGTCTTTCTCCTCAGATCGA+AGG + chr7_1:77816072-77816091 Msa1040430:CDS 50.0%
!! TTAGGAGCACCTTCGATCTG+AGG - chr7_1:77816084-77816103 None:intergenic 50.0%
GTTGCTATCCCAACCGTTGA+TGG + chr7_1:77816138-77816157 Msa1040430:CDS 50.0%
TTCAAGCCTGAGAGCTTGAG+AGG + chr7_1:77816466-77816485 Msa1040430:intron 50.0%
CTGCAATTGCAGTTGCCATC+TGG + chr7_1:77816811-77816830 Msa1040430:intron 50.0%
ACATCCTGTCGGAAGCTGAA+AGG + chr7_1:77817027-77817046 Msa1040430:CDS 50.0%
AGTACCTTTCAGCTTCCGAC+AGG - chr7_1:77817034-77817053 None:intergenic 50.0%
TTGGTCCACCATCTGACCAT+CGG - chr7_1:77817193-77817212 None:intergenic 50.0%
!! ATGGTCAGATGGTGGACCAA+TGG + chr7_1:77817193-77817212 Msa1040430:CDS 50.0%
!! TGGTCAGATGGTGGACCAAT+GGG + chr7_1:77817194-77817213 Msa1040430:CDS 50.0%
!! CACATGATACCGGTTCCCAT+TGG - chr7_1:77817212-77817231 None:intergenic 50.0%
GGTCTACGAGGAATTGCAAG+TGG + chr7_1:77817346-77817365 Msa1040430:intron 50.0%
CTACGAGGAATTGCAAGTGG+AGG + chr7_1:77817349-77817368 Msa1040430:CDS 50.0%
CAGAGGCTCCAATTCGATTG+AGG - chr7_1:77817916-77817935 None:intergenic 50.0%
CTCAATCGAATTGGAGCCTC+TGG + chr7_1:77817914-77817933 Msa1040430:CDS 50.0%
! TGTGGCGGTTTTCATAAGCG+TGG + chr7_1:77818174-77818193 Msa1040430:intron 50.0%
AGGCAAATGGTCAGCAGCAT+TGG - chr7_1:77818895-77818914 None:intergenic 50.0%
CCTCCTCTGAGTTAGGCAAA+TGG - chr7_1:77818908-77818927 None:intergenic 50.0%
CCATTTGCCTAACTCAGAGG+AGG + chr7_1:77818905-77818924 Msa1040430:CDS 50.0%
CGAATTGCCTCCTCTGAGTT+AGG - chr7_1:77818915-77818934 None:intergenic 50.0%
ACTCAGAGGAGGCAATTCGT+AGG + chr7_1:77818916-77818935 Msa1040430:CDS 50.0%
CTCAGAGGAGGCAATTCGTA+GGG + chr7_1:77818917-77818936 Msa1040430:CDS 50.0%
TCAGAGGAGGCAATTCGTAG+GGG + chr7_1:77818918-77818937 Msa1040430:CDS 50.0%
!! AAGCTTGGTTCGGGTGTTAG+AGG + chr7_1:77818959-77818978 Msa1040430:CDS 50.0%
AGGCCTTGCTCTCATCCAAT+TGG - chr7_1:77819478-77819497 None:intergenic 50.0%
GTTTATTACTCCCTCCGTCC+CGG + chr7_1:77819550-77819569 Msa1040430:intron 50.0%
ATGGCTCAGTTAATCCGGGA+CGG - chr7_1:77819567-77819586 None:intergenic 50.0%
GCTCAATTAATTCGGGACGG+AGG + chr7_1:77819782-77819801 Msa1040430:intron 50.0%
GTAGGAAGGCTTCTTGTGTG+TGG + chr7_1:77820167-77820186 Msa1040430:intron 50.0%
!! AGCTTCTGGAGTCACACACA+AGG - chr7_1:77820283-77820302 None:intergenic 50.0%
CTCACAACAATCGGCACTGT+AGG + chr7_1:77820431-77820450 Msa1040430:intron 50.0%
ATCGGCACTGTAGGTTACTC+AGG + chr7_1:77820440-77820459 Msa1040430:intron 50.0%
AGAGATCCAATGGGTGCACT+TGG + chr7_1:77820463-77820482 Msa1040430:CDS 50.0%
CATTACCCATCTCAGATGGC+CGG - chr7_1:77820540-77820559 None:intergenic 50.0%
! TCTCCGGCAAACTCGGATTT+TGG - chr7_1:77820633-77820652 None:intergenic 50.0%
GACGGACCGAATACCATCAA+TGG - chr7_1:77820722-77820741 None:intergenic 50.0%
! ATGAGGTACTAGCGCCAAGA+AGG + chr7_1:77821317-77821336 Msa1040430:intron 50.0%
! TGAGGTACTAGCGCCAAGAA+GGG + chr7_1:77821318-77821337 Msa1040430:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr7_1:77821459-77821478 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr7_1:77821481-77821500 Msa1040430:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr7_1:77821482-77821501 Msa1040430:intron 50.0%
! GGAGCTTTTCCATCGGTGAT+GGG - chr7_1:77822318-77822337 None:intergenic 50.0%
! CACGCGAAGTTTTACAAGGC+AGG - chr7_1:77822583-77822602 None:intergenic 50.0%
CTGCCTTGTAAAACTTCGCG+TGG + chr7_1:77822581-77822600 Msa1040430:CDS 50.0%
! ATCTAAGGCCTCTCGGCATT+CGG - chr7_1:77822817-77822836 None:intergenic 50.0%
ATCAACAGCATGTCGAGCCA+AGG + chr7_1:77822907-77822926 Msa1040430:CDS 50.0%
TCAACAGCATGTCGAGCCAA+GGG + chr7_1:77822908-77822927 Msa1040430:CDS 50.0%
! AGATCGTGGTGCTGAGTACT+TGG + chr7_1:77822947-77822966 Msa1040430:CDS 50.0%
! TGGAGCATCAGATCAAGACC+GGG + chr7_1:77823104-77823123 Msa1040430:CDS 50.0%
TCAGCATGGAGATGCAGTGA+TGG + chr7_1:77823249-77823268 Msa1040430:CDS 50.0%
CCCCAAAACAGAACCGTTTC+TGG - chr7_1:77823290-77823309 None:intergenic 50.0%
GGAGTTGCCATGCAACATAC+AGG - chr7_1:77824012-77824031 None:intergenic 50.0%
ATGGCAACTCCAACCATCTC+TGG + chr7_1:77824021-77824040 Msa1040430:CDS 50.0%
TGGCAACTCCAACCATCTCT+GGG + chr7_1:77824022-77824041 Msa1040430:CDS 50.0%
CTAAACCTGGGTTCACTGCT+CGG + chr7_1:77824079-77824098 Msa1040430:CDS 50.0%
CTCAAACACGTCGGAATCAC+CGG + chr7_1:77824195-77824214 Msa1040430:CDS 50.0%
TGTACAAGATGGCTCACCAC+AGG - chr7_1:77824222-77824241 None:intergenic 50.0%
ACGGCTGAAAGAAGACACAC+TGG + chr7_1:77824327-77824346 Msa1040430:CDS 50.0%
CTGGCTGAGATTAGACAGTC+TGG + chr7_1:77824346-77824365 Msa1040430:CDS 50.0%
GCTGAGATTAGACAGTCTGG+TGG + chr7_1:77824349-77824368 Msa1040430:CDS 50.0%
! TGCATCGACATCAGAGGCTA+AGG - chr7_1:77824554-77824573 None:intergenic 50.0%
!! GTATCGCACACAGGTTTTGG+TGG + chr7_1:77825007-77825026 Msa1040430:CDS 50.0%
CACTTAGGATGGGCGACTAT+CGG + chr7_1:77825173-77825192 Msa1040430:CDS 50.0%
ACTTAGGATGGGCGACTATC+GGG + chr7_1:77825174-77825193 Msa1040430:CDS 50.0%
ACCCAAAAAGGGAAAGGACG+GGG + chr7_1:77825423-77825442 Msa1040430:intron 50.0%
! TCCCCGTCCTTTCCCTTTTT+GGG - chr7_1:77825427-77825446 None:intergenic 50.0%
!! CTTGAAGGGGGTACTTTCAG+CGG + chr7_1:77825447-77825466 Msa1040430:intron 50.0%
TTCACCGGGGAAGTTTGATG+TGG + chr7_1:77825544-77825563 Msa1040430:intron 50.0%
GTTGCCACATCAAACTTCCC+CGG - chr7_1:77825551-77825570 None:intergenic 50.0%
! ATATGGTAGCGTGTGGGAGT+TGG + chr7_1:77825882-77825901 Msa1040430:intron 50.0%
!! AAGGAAAAAGTACCGCCTGG+AGG - chr7_1:77826297-77826316 None:intergenic 50.0%
CCCGACGATACAGAATTTGC+TGG + chr7_1:77826350-77826369 Msa1040430:CDS 50.0%
TGGTCATGCCGATGTACAGT+TGG + chr7_1:77826455-77826474 Msa1040430:three_prime_UTR 50.0%
CGGGTAGAAGAGGTTATAGG+TGG - chr7_1:77826501-77826520 None:intergenic 50.0%
!!! TTTTCTGCATTGGTGGCGCG+TGG + chr7_1:77815928-77815947 Msa1040430:intron 55.0%
ATGCGAGGAGGTTCAGTGCT+TGG + chr7_1:77816000-77816019 Msa1040430:CDS 55.0%
TGAACTGCCCGATGGTCAGA+TGG + chr7_1:77817182-77817201 Msa1040430:CDS 55.0%
TGGTCCACCATCTGACCATC+GGG - chr7_1:77817192-77817211 None:intergenic 55.0%
!! GATGGTGGACCAATGGGAAC+CGG + chr7_1:77817200-77817219 Msa1040430:CDS 55.0%
TGGACGAACGACAACCGGAA+TGG + chr7_1:77817871-77817890 Msa1040430:CDS 55.0%
!! TCCAACTAGTGCTCTAGGGG+AGG + chr7_1:77818414-77818433 Msa1040430:intron 55.0%
! TCCTCCCCTAGAGCACTAGT+TGG - chr7_1:77818418-77818437 None:intergenic 55.0%
! GGTTCGGGTGTTAGAGGTAC+CGG + chr7_1:77818965-77818984 Msa1040430:intron 55.0%
CTCAGTTAATCCGGGACGGA+GGG - chr7_1:77819563-77819582 None:intergenic 55.0%
TCCACTCTCTCCGGCAAACT+CGG - chr7_1:77820640-77820659 None:intergenic 55.0%
AGTTTGCCGGAGAGAGTGGA+CGG + chr7_1:77820640-77820659 Msa1040430:CDS 55.0%
TCTTTGGTTGGGAGGGAGTC+TGG - chr7_1:77821098-77821117 None:intergenic 55.0%
GGGCATGTTAGTGCCCTTCT+TGG - chr7_1:77821334-77821353 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr7_1:77821494-77821513 Msa1040430:intron 55.0%
ACCAAAGCTCCCGCATATGC+GGG - chr7_1:77821592-77821611 None:intergenic 55.0%
CACCAAAGCTCCCGCATATG+CGG - chr7_1:77821593-77821612 None:intergenic 55.0%
! GGGAGCTTTTCCATCGGTGA+TGG - chr7_1:77822319-77822338 None:intergenic 55.0%
! ACGCTCGGGAGCTTTTCCAT+CGG - chr7_1:77822325-77822344 None:intergenic 55.0%
TATCACAGATGGGTAGGGGC+AGG + chr7_1:77822535-77822554 Msa1040430:CDS 55.0%
! TAATGGTGCCGAATGCCGAG+AGG + chr7_1:77822806-77822825 Msa1040430:CDS 55.0%
AGCATGTCGAGCCAAGGGTA+AGG + chr7_1:77822913-77822932 Msa1040430:CDS 55.0%
ATGTCGAGCCAAGGGTAAGG+AGG + chr7_1:77822916-77822935 Msa1040430:CDS 55.0%
TGTCGAGCCAAGGGTAAGGA+GGG + chr7_1:77822917-77822936 Msa1040430:CDS 55.0%
AAAGCCACCCTCCTTACCCT+TGG - chr7_1:77822927-77822946 None:intergenic 55.0%
!! AGGAGGGTGGCTTTAGATCG+TGG + chr7_1:77822933-77822952 Msa1040430:CDS 55.0%
! GTGGTGCTGAGTACTTGGAG+CGG + chr7_1:77822952-77822971 Msa1040430:CDS 55.0%
TTGGTTGCATCAGAGGCCAG+AGG + chr7_1:77823067-77823086 Msa1040430:CDS 55.0%
! GGAGCATCAGATCAAGACCG+GGG + chr7_1:77823105-77823124 Msa1040430:CDS 55.0%
GGGACAGTGAAAAACCTCCC+CGG - chr7_1:77823125-77823144 None:intergenic 55.0%
! TGACGTGTAGCCTTACCCTC+TGG - chr7_1:77823455-77823474 None:intergenic 55.0%
GGCAACTCCAACCATCTCTG+GGG + chr7_1:77824023-77824042 Msa1040430:CDS 55.0%
ACTTTCCGAGCAGTGAACCC+AGG - chr7_1:77824087-77824106 None:intergenic 55.0%
AAGATGGCTCACCACAGGAC+CGG - chr7_1:77824217-77824236 None:intergenic 55.0%
!! TGCTTTGGGGACCATGTACG+AGG - chr7_1:77825222-77825241 None:intergenic 55.0%
! GTCCCCGTCCTTTCCCTTTT+TGG - chr7_1:77825428-77825447 None:intergenic 55.0%
GGAAAGGACGGGGACTTGAA+GGG + chr7_1:77825433-77825452 Msa1040430:intron 55.0%
GAAAGGACGGGGACTTGAAG+GGG + chr7_1:77825434-77825453 Msa1040430:intron 55.0%
AAAGGACGGGGACTTGAAGG+GGG + chr7_1:77825435-77825454 Msa1040430:intron 55.0%
!! GGCGCGTGGTTTTCAAGCGA+TGG + chr7_1:77815942-77815961 Msa1040430:intron 60.0%
TGGCGGCTCATGCATCCAGA+TGG - chr7_1:77816829-77816848 None:intergenic 60.0%
CGGGCAGTTCATCCGTCACA+AGG - chr7_1:77817173-77817192 None:intergenic 60.0%
!! GTGACGGATGAACTGCCCGA+TGG + chr7_1:77817174-77817193 Msa1040430:CDS 60.0%
ACTGCCCGATGGTCAGATGG+TGG + chr7_1:77817185-77817204 Msa1040430:CDS 60.0%
ATCAGCAGTCCCACCACGAC+AGG - chr7_1:77817656-77817675 None:intergenic 60.0%
GCTCAGTTAATCCGGGACGG+AGG - chr7_1:77819564-77819583 None:intergenic 60.0%
TGATGGCCGGCCATCTGAGA+TGG + chr7_1:77820531-77820550 Msa1040430:CDS 60.0%
! GATGGCCGGCCATCTGAGAT+GGG + chr7_1:77820532-77820551 Msa1040430:CDS 60.0%
TCCGAGTTTGCCGGAGAGAG+TGG + chr7_1:77820636-77820655 Msa1040430:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr7_1:77821564-77821583 Msa1040430:intron 60.0%
CCAAAGCTCCCGCATATGCG+GGG - chr7_1:77821591-77821610 None:intergenic 60.0%
! ATGCGGGAGCTTTGGTGCAC+CGG + chr7_1:77821596-77821615 Msa1040430:intron 60.0%
GCACGTGTACCCATCACCGA+TGG + chr7_1:77822306-77822325 Msa1040430:CDS 60.0%
GGTAGGGGCAGGACTACTAC+TGG + chr7_1:77822546-77822565 Msa1040430:CDS 60.0%
! GCATCAGAGGCCAGAGGTAC+AGG + chr7_1:77823073-77823092 Msa1040430:CDS 60.0%
GCATCAGATCAAGACCGGGG+AGG + chr7_1:77823108-77823127 Msa1040430:CDS 60.0%
!! TCCAACCATCTCTGGGGCCA+AGG + chr7_1:77824029-77824048 Msa1040430:CDS 60.0%
TCCTTGGCCCCAGAGATGGT+TGG - chr7_1:77824033-77824052 None:intergenic 60.0%
CATCTCCTTGGCCCCAGAGA+TGG - chr7_1:77824037-77824056 None:intergenic 60.0%
GGGAAAGGACGGGGACTTGA+AGG + chr7_1:77825432-77825451 Msa1040430:intron 60.0%
GGGCGTGGACGAACGACAAC+CGG + chr7_1:77817866-77817885 Msa1040430:CDS 65.0%
!! GGAGCACCGTCCACTCTCTC+CGG - chr7_1:77820649-77820668 None:intergenic 65.0%
GGTTGGGAGGGAGTCTGGCT+TGG - chr7_1:77821093-77821112 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr7_1:77821566-77821585 None:intergenic 65.0%
CATATGCGGGGTCCGGGAAG+GGG - chr7_1:77821579-77821598 None:intergenic 65.0%
GCATATGCGGGGTCCGGGAA+GGG - chr7_1:77821580-77821599 None:intergenic 65.0%
CTTCCCGGACCCCGCATATG+CGG + chr7_1:77821579-77821598 Msa1040430:intron 65.0%
TTCCCGGACCCCGCATATGC+GGG + chr7_1:77821580-77821599 Msa1040430:intron 65.0%
CCCCGCATATGCGGGAGCTT+TGG + chr7_1:77821588-77821607 Msa1040430:intron 65.0%
! TGCGGGAGCTTTGGTGCACC+GGG + chr7_1:77821597-77821616 Msa1040430:intron 65.0%
CGAGCCAAGGGTAAGGAGGG+TGG + chr7_1:77822920-77822939 Msa1040430:CDS 65.0%
CGTCGGAATCACCGGTCCTG+TGG + chr7_1:77824203-77824222 Msa1040430:CDS 65.0%
CGCATATGCGGGGTCCGGGA+AGG - chr7_1:77821581-77821600 None:intergenic 70.0%
CTCCCGCATATGCGGGGTCC+GGG - chr7_1:77821585-77821604 None:intergenic 70.0%
GCTCCCGCATATGCGGGGTC+CGG - chr7_1:77821586-77821605 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77815820 77826896 77815820 ID=Msa1040430;Name=Msa1040430
chr7_1 mRNA 77815820 77826896 77815820 ID=Msa1040430-mRNA-1;Parent=Msa1040430;Name=Msa1040430-mRNA-1;_AED=0.13;_eAED=0.13;_QI=116|0.94|0.88|1|0.94|0.88|18|463|1247
chr7_1 exon 77815820 77815917 77815820 ID=Msa1040430-mRNA-1:exon:20587;Parent=Msa1040430-mRNA-1
chr7_1 exon 77815943 77816239 77815943 ID=Msa1040430-mRNA-1:exon:20588;Parent=Msa1040430-mRNA-1
chr7_1 exon 77816325 77816396 77816325 ID=Msa1040430-mRNA-1:exon:20589;Parent=Msa1040430-mRNA-1
chr7_1 exon 77816978 77817048 77816978 ID=Msa1040430-mRNA-1:exon:20590;Parent=Msa1040430-mRNA-1
chr7_1 exon 77817155 77817254 77817155 ID=Msa1040430-mRNA-1:exon:20591;Parent=Msa1040430-mRNA-1
chr7_1 exon 77817347 77817445 77817347 ID=Msa1040430-mRNA-1:exon:20592;Parent=Msa1040430-mRNA-1
chr7_1 exon 77817809 77817935 77817809 ID=Msa1040430-mRNA-1:exon:20593;Parent=Msa1040430-mRNA-1
chr7_1 exon 77818847 77818980 77818847 ID=Msa1040430-mRNA-1:exon:20594;Parent=Msa1040430-mRNA-1
chr7_1 exon 77819060 77819119 77819060 ID=Msa1040430-mRNA-1:exon:20595;Parent=Msa1040430-mRNA-1
chr7_1 exon 77819285 77819376 77819285 ID=Msa1040430-mRNA-1:exon:20596;Parent=Msa1040430-mRNA-1
chr7_1 exon 77820453 77820882 77820453 ID=Msa1040430-mRNA-1:exon:20597;Parent=Msa1040430-mRNA-1
chr7_1 exon 77822093 77823145 77822093 ID=Msa1040430-mRNA-1:exon:20598;Parent=Msa1040430-mRNA-1
chr7_1 exon 77823223 77823396 77823223 ID=Msa1040430-mRNA-1:exon:20599;Parent=Msa1040430-mRNA-1
chr7_1 exon 77823997 77824224 77823997 ID=Msa1040430-mRNA-1:exon:20600;Parent=Msa1040430-mRNA-1
chr7_1 exon 77824310 77824593 77824310 ID=Msa1040430-mRNA-1:exon:20601;Parent=Msa1040430-mRNA-1
chr7_1 exon 77824985 77825269 77824985 ID=Msa1040430-mRNA-1:exon:20602;Parent=Msa1040430-mRNA-1
chr7_1 exon 77825634 77825756 77825634 ID=Msa1040430-mRNA-1:exon:20603;Parent=Msa1040430-mRNA-1
chr7_1 exon 77826301 77826896 77826301 ID=Msa1040430-mRNA-1:exon:20604;Parent=Msa1040430-mRNA-1
chr7_1 five_prime_UTR 77815820 77815917 77815820 ID=Msa1040430-mRNA-1:five_prime_utr;Parent=Msa1040430-mRNA-1
chr7_1 five_prime_UTR 77815943 77815960 77815943 ID=Msa1040430-mRNA-1:five_prime_utr;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77815961 77816239 77815961 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77816325 77816396 77816325 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77816978 77817048 77816978 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77817155 77817254 77817155 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77817347 77817445 77817347 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77817809 77817935 77817809 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77818847 77818980 77818847 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77819060 77819119 77819060 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77819285 77819376 77819285 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77820453 77820882 77820453 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77822093 77823145 77822093 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77823223 77823396 77823223 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77823997 77824224 77823997 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77824310 77824593 77824310 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77824985 77825269 77824985 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77825634 77825756 77825634 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 CDS 77826301 77826433 77826301 ID=Msa1040430-mRNA-1:cds;Parent=Msa1040430-mRNA-1
chr7_1 three_prime_UTR 77826434 77826896 77826434 ID=Msa1040430-mRNA-1:three_prime_utr;Parent=Msa1040430-mRNA-1
Gene Sequence

>Msa1040430

ATGGCAAGAGTAGTGAAGGAACCAGAGGAAGTGATGAGAATGCGAGGAGGTTCAGTGCTTGGAAAGAAGACAATTCTGAAGAGTGACCATTTTCCTGGTTGTCAAAACAAACGTCTTTCTCCTCAGATCGAAGGTGCTCCTAATTATCGTCGTGCTGACTCTTTGCATGTTCATGGTGTTGCTATCCCAACCGTTGATGGAATCAGAAATGTTCTTAATCACATTCGTAATCGCCAGAACAAACAACAAGTTCTTTGGATTAGTCTTCGTGAAGAACCGCTTGTGTACATTAATGGTCGTCCATTTGTTCTGCGTGATGTTGAGAGACCATTCTCCAACCTCGAGTATACGGGAATTAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATCCTGTCGGAAGCTGAAAGATATGGATATAAGATCCTTGTGACGGATGAACTGCCCGATGGTCAGATGGTGGACCAATGGGAACCGGTATCATGTGATTCTGTGAAGACACCATTAGAGGTCTACGAGGAATTGCAAGTGGAGGGATACCTTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAATCACCTAAGGAGCTGGATTTTGATATTTTGGTACATAAAATTTCTCAAGCTGATGTAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACCGGAATGGTTATCGCAACTTTGGTCTACCTCAATCGAATTGGAGCCTCTGGGATTCCAAGAAGCAATTCTATGGGTAGAATTTTTCAATCTATGACCAATGCTGCTGACCATTTGCCTAACTCAGAGGAGGCAATTCGTAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGTGGTGTTGACGGAAAAAGACAAGTCGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATTTGCGTGAAGCAATTGGTACCTATCGCAATAGCATTCTGCGACAGCCAGATGAGATGAAAAAGGAGGCATCACTTTCCTTTTTTGTGGAGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGAAACCATCTTTAACAAAGATAGCTGAATCATCTGATGGCCGGCCATCTGAGATGGGTAATGTTGCTGCCTTGAGAAAAGGCGAAGTTCTTGGAAGTCAAACTGTTCTTAAAAGCGATCACTGTCCTGGATGCCAAAATCCGAGTTTGCCGGAGAGAGTGGACGGTGCTCCTAATTTTCGAAAAGTTCCTGGATTTCCAGTTTTTGGTGTTGCAAATCCAACCATTGATGGTATTCGGTCCGTCATTCATAGGATTTGCAGTACTAATGGTGGATGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAACGACCATACAAGAACATGTTGGAGTACACGGGTATTGACTGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGACATTTTAAGGGAAGCTAAACAATATAGCAGTGCCATAATGGTTATTCATGAAACAGATGATGGTCATATATTTGATGCTTGGGAGCATGTTACCTCTGATTTGATTCAAACACCACTTGAAGTTTTCAAAAGCTTGGAAGCTGAAGGGTTTCCCATTAAGTATGCACGTGTACCCATCACCGATGGAAAAGCTCCCGAGCGTTCTGACTTTGACATTTTGGCAAATAATATTGCTTCTGCTGCAAAGGACACTGCTTTTGTTTTCAATTGTCAGGTCATTTCTTATTCTTTTATCTCTTATGCTTTATCAGTTATGAATGCGTTCATTATATGTTCATCATCGGTTCTTGTCTTTTTGTCCTTTTCATTTCTAGCTGCTAATATCTCATTGATATCACAGATGGGTAGGGGCAGGACTACTACTGGCACAGTGATAGCCTGCCTTGTAAAACTTCGCGTGGATTTTGGTAGGCCAATTAAAATATTGAGTGATGATATAACCCAAGAAGAATCAAATGGCGGTTCTTCAAGTGGAGATGAAGCTTTAGGTCGTGTCACTGCACTGACCTCCAATATTTCACAAATGAAGATAGACGAGAAACAAAACCGTGTTTTTGGTATAAATGACATTCTCTTGTTATGGAAGATAACCACATTATTTGATAATGGTGCCGAATGCCGAGAGGCCTTAGATGCTGTTATTGATAGATGTTCTGCACTTCAAAACATTCGTCAAGCTGTCCTACAATATAGAAAAGTATTCAATCAACAGCATGTCGAGCCAAGGGTAAGGAGGGTGGCTTTAGATCGTGGTGCTGAGTACTTGGAGCGGTACTTCCGTCTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTTGATGGGTTTTGTGGACAAGGGAAATCCAGAATGACATTCAAGGTTTGGTTGCATCAGAGGCCAGAGGTACAGGCTATGAAATGGAGCATCAGATCAAGACCGGGGAGGTTTTTCACTGTCCCTGAGGAATTGAGAGAATCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGTCTACTGTCAATGCCAGAAACGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAATAATATACAAATACATGGTGCACCTCATGTTTACAAGGTTGATGGATACCCTGTATGTTGCATGGCAACTCCAACCATCTCTGGGGCCAAGGAGATGCTAAACTATCTGGATGCTAAGTCTAAACCTGGGTTCACTGCTCGGAAAGTTATATTGACCGATGTAAGAGAAGAAGCAGTTGTTTATATCAATTGTGTTCCCTTTGTCCACAGGGAGTTAAACAAACCTGTTGATACACTCAAACACGTCGGAATCACCGGTCCTGTGGTTGAACACATGGAAGCACGGCTGAAAGAAGACACACTGGCTGAGATTAGACAGTCTGGTGGGCGAATGCTACTACACCGTGAAGAATATGATCCCTCAACAAATCAGTCTACTGTGGTTGGATACTGGGAAAACATTCTGGCAGATGATGTGAAGACACCAGCAGAAGTTTATTCTTTTCTAAAAGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAGAGAGATGCCTTAGCCTCTGATGTCGATGCAATACAGTATTGTCAAGATGACTCTGCAGGGAGTTACCTCTTTGTATCGCACACAGGTTTTGGTGGAGTTGCATATGCAATGGCCATAATCTGTATTAGACTTGGTGCAGAGGCAAACTTTGCATCCAAAGTACTGCAGCCATCATTTGGTCCTGATACATATGCAGTGACTGAAGATAATTCACTTTCTCGAGCTTCTAATGAAACAGCACTTAGGATGGGCGACTATCGGGACATTTTGAACCTTACAAGAGTCCTCGTACATGGTCCCCAAAGCAAATCAGATGTTGACATTGTCATTGAAAGATGTGCAGGCGCAGGACATATTCGAGATGATATTCTTTATTACATTAGAGAATTTGAGAAGTTTACTGATGATGATGATGAAGAGCGTGCATATCTTTTTGACATGGGTATCAAGGCTTTGAGGCGGTACTTTTTCCTTATCACATTCAGATCGTATCTCTACTGCAACTCTCCCGACGATACAGAATTTGCTGGATGGATGGATGCAAGACCCGAGCTTAGTCATCTATGTAACAATCTAAGAATAGATAAATAG
Protein sequence

>Msa1040430

MARVVKEPEEVMRMRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRRADSLHVHGVAIPTVDGIRNVLNHIRNRQNKQQVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILSEAERYGYKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKELDFDILVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSMGRIFQSMTNAADHLPNSEEAIRRGEYAVIRSLVRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKKEASLSFFVELLRRDPMGALGYSSLKPSLTKIAESSDGRPSEMGNVAALRKGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFRKVPGFPVFGVANPTIDGIRSVIHRICSTNGGCPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDCERVEKMEARLKEDILREAKQYSSAIMVIHETDDGHIFDAWEHVTSDLIQTPLEVFKSLEAEGFPIKYARVPITDGKAPERSDFDILANNIASAAKDTAFVFNCQVISYSFISYALSVMNAFIICSSSVLVFLSFSFLAANISLISQMGRGRTTTGTVIACLVKLRVDFGRPIKILSDDITQEESNGGSSSGDEALGRVTALTSNISQMKIDEKQNRVFGINDILLLWKITTLFDNGAECREALDAVIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALDRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGKSRMTFKVWLHQRPEVQAMKWSIRSRPGRFFTVPEELRESQESQHGDAVMESTVNARNGSVLGKGSILKMYFFPGQRTSNNIQIHGAPHVYKVDGYPVCCMATPTISGAKEMLNYLDAKSKPGFTARKVILTDVREEAVVYINCVPFVHRELNKPVDTLKHVGITGPVVEHMEARLKEDTLAEIRQSGGRMLLHREEYDPSTNQSTVVGYWENILADDVKTPAEVYSFLKDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLGAEANFASKVLQPSFGPDTYAVTEDNSLSRASNETALRMGDYRDILNLTRVLVHGPQSKSDVDIVIERCAGAGHIRDDILYYIREFEKFTDDDDEERAYLFDMGIKALRRYFFLITFRSYLYCNSPDDTEFAGWMDARPELSHLCNNLRIDK*