AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040530 MtrunA17_Chr7g0270891 95.442 373 11 1 1 373 1 367 0.0 736
Msa1040530 MtrunA17_Chr1g0193801 63.077 390 97 15 1 364 1 369 2.51e-154 439
Msa1040530 MtrunA17_Chr1g0193371 49.861 359 143 7 1 347 1 334 1.17e-101 305
Msa1040530 MtrunA17_Chr4g0058631 78.146 151 32 1 1 151 1 150 2.51e-84 260
Msa1040530 MtrunA17_Chr7g0271241 77.707 157 33 1 1 157 1 155 9.90e-78 244
Msa1040530 MtrunA17_Chr1g0211161 56.481 216 84 1 3 218 4 209 6.98e-77 236
Msa1040530 MtrunA17_Chr3g0117091 76.056 142 33 1 1 141 1 142 1.70e-76 239
Msa1040530 MtrunA17_Chr2g0330041 71.429 133 38 0 1 133 1 133 5.47e-68 219
Msa1040530 MtrunA17_Chr8g0342521 75.610 123 30 0 1 123 1 123 3.28e-67 216
Msa1040530 MtrunA17_Chr8g0342541 74.797 123 31 0 1 123 1 123 1.88e-66 214
Msa1040530 MtrunA17_Chr2g0309911 70.769 130 37 1 1 130 1 129 9.68e-66 211
Msa1040530 MtrunA17_Chr4g0037141 51.934 181 80 1 1 181 1 174 4.64e-63 203
Msa1040530 MtrunA17_Chr3g0115821 65.909 132 45 0 1 132 1 132 1.47e-62 204
Msa1040530 MtrunA17_Chr4g0039971 50.505 198 89 2 1 194 2 194 1.69e-62 204
Msa1040530 MtrunA17_Chr8g0387421 72.034 118 33 0 1 118 1 118 5.39e-62 201
Msa1040530 MtrunA17_Chr8g0385321 66.667 132 44 0 1 132 1 132 8.08e-62 201
Msa1040530 MtrunA17_Chr8g0342481 75.214 117 28 1 1 116 1 117 1.29e-60 200
Msa1040530 MtrunA17_Chr5g0410961 41.034 290 128 9 1 282 1 255 1.39e-60 198
Msa1040530 MtrunA17_Chr3g0131121 64.885 131 46 0 1 131 1 131 1.71e-60 197
Msa1040530 MtrunA17_Chr6g0453471 67.188 128 42 0 1 128 1 128 3.08e-60 198
Msa1040530 MtrunA17_Chr7g0217741 65.909 132 45 0 1 132 1 132 5.11e-60 196
Msa1040530 MtrunA17_Chr4g0042671 67.188 128 42 0 1 128 1 128 8.62e-60 198
Msa1040530 MtrunA17_Chr5g0395281 70.833 120 35 0 12 131 12 131 1.04e-59 195
Msa1040530 MtrunA17_Chr5g0434571 60.690 145 57 0 1 145 37 181 4.60e-59 195
Msa1040530 MtrunA17_Chr5g0397231 73.636 110 29 0 1 110 1 110 1.05e-58 193
Msa1040530 MtrunA17_Chr7g0228891 45.833 216 114 2 1 213 1 216 1.21e-58 191
Msa1040530 MtrunA17_Chr3g0110351 66.923 130 43 0 1 130 1 130 1.28e-58 192
Msa1040530 MtrunA17_Chr3g0103281 59.091 154 60 1 1 154 1 151 2.11e-58 192
Msa1040530 MtrunA17_Chr2g0281071 65.891 129 43 1 1 128 1 129 2.29e-58 193
Msa1040530 MtrunA17_Chr2g0323411 67.188 128 42 0 1 128 1 128 7.24e-58 191
Msa1040530 MtrunA17_Chr1g0203411 54.598 174 71 2 1 168 1 172 8.06e-58 190
Msa1040530 MtrunA17_Chr4g0048511 65.116 129 44 1 1 128 1 129 1.03e-57 191
Msa1040530 MtrunA17_Chr6g0452271 62.121 132 50 0 1 132 1 132 1.09e-57 191
Msa1040530 MtrunA17_Chr5g0435101 63.200 125 46 0 3 127 2 126 1.27e-57 186
Msa1040530 MtrunA17_Chr8g0349261 66.667 132 42 2 1 130 1 132 2.41e-57 189
Msa1040530 MtrunA17_Chr4g0032401 74.107 112 29 0 11 122 16 127 2.70e-57 189
Msa1040530 MtrunA17_Chr4g0057031 63.359 131 48 0 1 131 1 131 3.77e-57 187
Msa1040530 MtrunA17_Chr2g0328771 76.415 106 25 0 12 117 20 125 6.00e-57 188
Msa1040530 MtrunA17_Chr3g0088461 76.147 109 26 0 9 117 19 127 2.39e-56 187
Msa1040530 MtrunA17_Chr7g0274581 56.000 150 55 1 1 150 1 139 1.25e-55 181
Msa1040530 MtrunA17_Chr7g0261281 66.949 118 39 0 1 118 1 118 2.17e-54 180
Msa1040530 MtrunA17_Chr4g0044421 62.698 126 47 0 1 126 1 126 3.10e-54 177
Msa1040530 MtrunA17_Chr1g0203441 69.748 119 35 1 9 127 10 127 2.16e-53 177
Msa1040530 MtrunA17_Chr1g0187761 67.797 118 38 0 1 118 1 118 3.36e-53 177
Msa1040530 MtrunA17_Chr6g0470971 70.339 118 34 1 9 125 11 128 1.49e-52 176
Msa1040530 MtrunA17_Chr3g0121241 62.903 124 46 0 6 129 36 159 5.09e-52 175
Msa1040530 MtrunA17_Chr1g0167661 65.517 116 40 0 1 116 1 116 1.89e-51 172
Msa1040530 MtrunA17_Chr1g0167691 64.655 116 41 0 1 116 1 116 9.73e-51 170
Msa1040530 MtrunA17_Chr5g0417821 63.025 119 44 0 12 130 7 125 2.34e-50 170
Msa1040530 MtrunA17_Chr2g0311221 66.055 109 37 0 2 110 4 112 1.35e-49 169
Msa1040530 MtrunA17_Chr2g0323351 63.793 116 42 0 1 116 1 116 1.60e-49 167
Msa1040530 MtrunA17_Chr4g0022931 54.074 135 62 0 5 139 6 140 2.62e-49 167
Msa1040530 MtrunA17_Chr4g0070611 61.538 117 45 0 1 117 1 117 4.21e-49 167
Msa1040530 MtrunA17_Chr8g0342511 80.460 87 17 0 1 87 1 87 4.68e-49 160
Msa1040530 MtrunA17_Chr8g0346561 62.712 118 44 0 1 118 1 118 8.36e-49 166
Msa1040530 MtrunA17_Chr4g0070641 61.538 117 45 0 1 117 1 117 1.04e-48 162
Msa1040530 MtrunA17_Chr8g0342531 77.528 89 20 0 1 89 1 89 1.93e-48 161
Msa1040530 MtrunA17_Chr1g0151941 54.412 136 58 3 1 135 1 133 3.07e-48 164
Msa1040530 MtrunA17_Chr4g0022901 63.964 111 40 0 5 115 6 116 7.21e-48 163
Msa1040530 MtrunA17_Chr7g0275911 61.538 117 45 0 1 117 1 117 8.76e-48 162
Msa1040530 MtrunA17_Chr4g0068061 62.931 116 43 0 1 116 1 116 9.23e-48 165
Msa1040530 MtrunA17_Chr1g0152011 47.727 176 79 2 1 175 1 164 1.33e-47 164
Msa1040530 MtrunA17_Chr4g0028311 57.812 128 53 1 1 127 1 128 6.08e-46 160
Msa1040530 MtrunA17_Chr1g0194951 62.931 116 43 0 1 116 1 116 6.18e-46 161
Msa1040530 MtrunA17_Chr4g0022911 58.621 116 47 1 1 115 1 116 7.73e-46 158
Msa1040530 MtrunA17_Chr5g0400821 40.826 218 106 3 1 217 1 196 1.18e-45 159
Msa1040530 MtrunA17_Chr3g0135311 59.167 120 48 1 1 119 1 120 2.97e-45 159
Msa1040530 MtrunA17_Chr7g0217221 57.627 118 50 0 1 118 1 118 3.09e-45 156
Msa1040530 MtrunA17_Chr8g0342461 75.556 90 21 1 1 89 1 90 8.61e-45 151
Msa1040530 MtrunA17_Chr4g0060721 44.444 171 86 2 1 165 2 169 2.11e-44 156
Msa1040530 MtrunA17_Chr8g0342471 74.444 90 22 1 1 89 1 90 2.97e-44 149
Msa1040530 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 9.02e-44 154
Msa1040530 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 2.22e-43 152
Msa1040530 MtrunA17_Chr4g0022881 55.556 135 50 2 9 136 9 140 2.72e-43 150
Msa1040530 MtrunA17_Chr7g0254411 55.200 125 54 1 1 123 1 125 4.25e-43 152
Msa1040530 MtrunA17_Chr7g0264641 57.265 117 49 1 1 116 1 117 7.67e-43 150
Msa1040530 MtrunA17_Chr3g0092401 56.780 118 51 0 1 118 2 119 8.39e-43 151
Msa1040530 MtrunA17_Chr7g0269831 56.835 139 59 1 1 138 1 139 2.43e-42 151
Msa1040530 MtrunA17_Chr7g0247131 68.539 89 28 0 44 132 10 98 4.31e-42 148
Msa1040530 MtrunA17_Chr7g0228231 55.833 120 51 1 1 118 1 120 6.09e-42 145
Msa1040530 MtrunA17_Chr4g0022891 53.030 132 58 1 9 136 9 140 7.52e-42 146
Msa1040530 MtrunA17_Chr3g0099131 59.813 107 43 0 12 118 41 147 1.08e-41 153
Msa1040530 MtrunA17_Chr6g0487491 56.452 124 45 2 1 115 1 124 2.28e-41 146
Msa1040530 MtrunA17_Chr1g0209661 52.033 123 59 0 11 133 26 148 2.32e-41 147
Msa1040530 MtrunA17_Chr6g0450101 58.333 108 45 0 11 118 13 120 2.85e-41 144
Msa1040530 MtrunA17_Chr1g0154031 62.264 106 40 0 12 117 76 181 3.30e-41 149
Msa1040530 MtrunA17_Chr8g0354661 61.321 106 41 0 12 117 37 142 4.12e-41 152
Msa1040530 MtrunA17_Chr4g0055981 61.682 107 41 0 9 115 52 158 4.35e-41 144
Msa1040530 MtrunA17_Chr6g0453211 57.273 110 47 0 1 110 1 110 4.38e-41 147
Msa1040530 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 7.12e-41 147
Msa1040530 MtrunA17_Chr1g0186061 57.658 111 47 0 5 115 13 123 3.72e-40 142
Msa1040530 MtrunA17_Chr8g0343831 57.273 110 47 0 10 119 6 115 5.82e-40 142
Msa1040530 MtrunA17_Chr3g0080861 57.547 106 45 0 12 117 37 142 6.57e-40 148
Msa1040530 MtrunA17_Chr1g0168661 55.263 114 51 0 4 117 13 126 9.54e-40 141
Msa1040530 MtrunA17_Chr1g0180391 54.400 125 50 2 12 135 19 137 3.34e-39 139
Msa1040530 MtrunA17_Chr1g0194301 54.955 111 50 0 12 122 33 143 1.18e-38 139
Msa1040530 MtrunA17_Chr5g0434831 59.048 105 43 0 12 116 7 111 1.47e-38 136
Msa1040530 MtrunA17_Chr1g0194291 53.719 121 55 1 12 132 21 140 3.81e-38 137
Msa1040530 MtrunA17_Chr5g0434931 53.636 110 51 0 12 121 35 144 7.22e-38 137
Msa1040530 MtrunA17_Chr5g0434911 54.545 110 50 0 7 116 16 125 9.78e-38 137
Msa1040530 MtrunA17_Chr7g0240821 60.000 100 40 0 17 116 6 105 1.46e-37 135
Msa1040530 MtrunA17_Chr4g0042611 62.500 88 33 0 1 88 1 88 1.93e-37 130
Msa1040530 MtrunA17_Chr2g0322521 59.434 106 43 0 12 117 29 134 1.48e-36 137
Msa1040530 MtrunA17_Chr2g0327821 52.252 111 53 0 9 119 3 113 4.68e-36 131
Msa1040530 MtrunA17_Chr7g0220341 54.545 110 48 1 12 119 25 134 5.05e-36 132
Msa1040530 MtrunA17_Chr5g0434841 55.140 107 48 0 10 116 18 124 5.46e-36 133
Msa1040530 MtrunA17_Chr8g0360111 57.426 101 43 0 12 112 25 125 1.07e-35 131
Msa1040530 MtrunA17_Chr7g0228991 54.206 107 49 0 10 116 27 133 2.19e-35 130
Msa1040530 MtrunA17_Chr1g0192411 43.333 180 94 5 11 186 11 186 2.74e-35 133
Msa1040530 MtrunA17_Chr5g0440781 44.595 148 71 4 13 159 13 150 5.17e-35 127
Msa1040530 MtrunA17_Chr8g0334881 54.545 110 49 1 9 117 7 116 5.72e-35 130
Msa1040530 MtrunA17_Chr4g0030881 52.632 114 47 1 13 119 8 121 1.35e-34 128
Msa1040530 MtrunA17_Chr5g0440761 44.595 148 71 4 13 159 13 150 2.02e-34 127
Msa1040530 MtrunA17_Chr5g0441141 44.595 148 71 4 13 159 13 150 2.05e-34 128
Msa1040530 MtrunA17_Chr2g0294811 60.227 88 35 0 1 88 1 88 2.31e-34 123
Msa1040530 MtrunA17_Chr2g0293911 55.856 111 49 0 12 122 24 134 6.27e-34 128
Msa1040530 MtrunA17_Chr4g0068921 54.955 111 50 0 12 122 24 134 1.48e-33 123
Msa1040530 MtrunA17_Chr4g0013361 55.140 107 47 1 12 117 10 116 3.84e-33 125
Msa1040530 MtrunA17_Chr5g0395221 67.500 80 26 0 9 88 9 88 5.22e-33 118
Msa1040530 MtrunA17_Chr2g0323321 60.465 86 34 0 7 92 6 91 6.34e-32 116
Msa1040530 MtrunA17_Chr5g0441131 49.558 113 55 2 13 124 10 121 1.62e-31 117
Msa1040530 MtrunA17_Chr3g0099141 56.627 83 36 0 12 94 40 122 9.22e-31 114
Msa1040530 MtrunA17_Chr3g0093811 58.427 89 37 0 44 132 14 102 1.75e-30 117
Msa1040530 MtrunA17_Chr4g0053431 53.922 102 46 1 14 115 5 105 1.38e-28 112
Msa1040530 MtrunA17_Chr4g0008551 48.673 113 53 2 14 126 38 145 2.55e-28 113
Msa1040530 MtrunA17_Chr7g0238631 40.000 190 102 5 12 196 111 293 2.96e-28 115
Msa1040530 MtrunA17_Chr5g0401731 49.138 116 58 1 14 129 15 129 2.39e-27 110
Msa1040530 MtrunA17_Chr5g0429661 44.231 104 57 1 12 115 120 222 7.77e-27 109
Msa1040530 MtrunA17_Chr6g0454921 39.053 169 102 1 14 182 15 182 1.59e-26 105
Msa1040530 MtrunA17_Chr3g0139671 48.113 106 54 1 11 116 82 186 1.05e-25 108
Msa1040530 MtrunA17_Chr7g0229101 60.000 70 28 0 44 113 4 73 7.46e-25 100
Msa1040530 MtrunA17_Chr6g0480581 43.396 106 59 1 14 119 4 108 8.66e-25 101
Msa1040530 MtrunA17_Chr6g0453751 53.763 93 34 2 12 95 20 112 1.50e-24 97.4
Msa1040530 MtrunA17_Chr5g0434901 60.294 68 27 0 46 113 7 74 2.46e-24 96.7
Msa1040530 MtrunA17_Chr1g0157731 47.170 106 55 1 11 116 88 192 2.87e-24 104
Msa1040530 MtrunA17_Chr7g0229131 56.164 73 32 0 44 116 4 76 3.38e-24 97.8
Msa1040530 MtrunA17_Chr4g0058991 41.964 112 62 2 9 119 204 313 6.10e-24 102
Msa1040530 MtrunA17_Chr4g0042501 42.453 106 60 1 14 119 105 209 8.71e-24 102
Msa1040530 MtrunA17_Chr3g0117511 42.593 108 60 2 14 120 183 289 8.73e-24 102
Msa1040530 MtrunA17_Chr5g0417621 41.284 109 63 1 11 119 131 238 9.95e-24 102
Msa1040530 MtrunA17_Chr3g0133601 48.039 102 52 1 14 115 37 137 1.18e-23 97.8
Msa1040530 MtrunA17_Chr6g0460661 41.509 106 59 2 14 118 16 119 6.08e-23 94.0
Msa1040530 MtrunA17_Chr7g0228401 30.435 184 116 4 25 200 290 469 1.13e-22 99.4
Msa1040530 MtrunA17_Chr5g0437321 48.485 99 50 1 14 112 19 116 1.26e-22 96.7
Msa1040530 MtrunA17_Chr3g0125801 44.860 107 56 2 14 119 16 120 1.71e-22 96.3
Msa1040530 MtrunA17_Chr7g0228531 42.991 107 56 3 14 120 220 321 3.60e-22 97.4
Msa1040530 MtrunA17_Chr1g0177901 32.065 184 106 5 33 208 13 185 4.57e-22 93.2
Msa1040530 MtrunA17_Chr5g0425591 48.810 84 42 1 13 95 10 93 4.76e-22 89.4
Msa1040530 MtrunA17_Chr6g0460671 41.905 105 60 1 14 118 99 202 4.81e-22 95.9
Msa1040530 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 1.97e-21 95.5
Msa1040530 MtrunA17_Chr7g0254261 34.437 151 97 2 8 158 83 231 1.31e-20 92.0
Msa1040530 MtrunA17_Chr7g0228481 39.091 110 62 3 14 120 220 327 3.55e-20 91.7
Msa1040530 MtrunA17_Chr7g0238651 37.069 116 65 2 17 124 10 125 2.07e-19 88.6
Msa1040530 MtrunA17_Chr7g0233061 39.623 106 60 4 14 119 180 281 1.59e-17 83.2
Msa1040530 MtrunA17_Chr5g0416341 35.238 105 67 1 17 121 29 132 6.37e-17 82.0
Msa1040530 MtrunA17_Chr5g0395231 44.118 102 52 2 78 179 5 101 3.37e-16 77.4
Msa1040530 MtrunA17_Chr1g0193901 50.562 89 42 2 10 96 9 97 9.13e-16 72.8
Msa1040530 MtrunA17_Chr1g0193891 50.562 89 42 2 10 96 9 97 9.13e-16 72.8
Msa1040530 MtrunA17_Chr1g0193871 50.562 89 42 2 10 96 9 97 9.13e-16 72.8
Msa1040530 MtrunA17_Chr1g0193881 50.562 89 42 2 10 96 9 97 9.13e-16 72.8
Msa1040530 MtrunA17_Chr8g0362231 34.211 114 73 2 17 130 25 136 2.11e-15 77.4
Msa1040530 MtrunA17_Chr4g0042621 69.565 46 13 1 84 128 9 54 1.13e-12 68.2
Msa1040530 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 2.05e-12 62.0
Msa1040530 MtrunA17_Chr3g0104491 37.931 87 47 3 53 132 1 87 3.26e-12 66.6
Msa1040530 MtrunA17_Chr3g0145551 65.000 40 14 0 92 131 2 41 7.34e-12 60.8
Msa1040530 MtrunA17_Chr7g0233151 27.673 159 92 6 65 207 1 152 6.34e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040530 AT4G01680.3 81.290 155 29 0 1 155 1 155 1.04e-91 275
Msa1040530 AT4G01680.1 81.290 155 29 0 1 155 1 155 4.68e-91 277
Msa1040530 AT1G09540.1 44.086 372 131 9 1 343 1 324 9.05e-89 272
Msa1040530 AT4G01680.2 75.449 167 29 1 1 155 1 167 1.20e-87 269
Msa1040530 AT1G57560.1 88.636 132 15 0 1 132 1 132 1.27e-86 265
Msa1040530 AT1G57560.2 87.970 133 16 0 1 133 1 133 6.34e-86 261
Msa1040530 AT5G26660.1 79.730 148 28 1 1 146 1 148 3.34e-85 263
Msa1040530 AT3G13890.2 80.172 116 23 0 1 116 1 116 2.62e-67 217
Msa1040530 AT3G12720.1 71.429 126 35 1 1 126 12 136 7.95e-66 211
Msa1040530 AT3G02940.2 67.407 135 44 0 1 135 1 135 4.35e-65 209
Msa1040530 AT3G02940.1 67.407 135 44 0 1 135 1 135 7.91e-65 209
Msa1040530 AT3G02940.3 67.407 135 44 0 1 135 1 135 7.91e-65 209
Msa1040530 AT3G13890.1 74.400 125 23 1 1 116 1 125 3.95e-64 209
Msa1040530 AT5G16770.4 66.667 135 45 0 1 135 1 135 4.16e-64 207
Msa1040530 AT5G16770.3 66.667 135 45 0 1 135 1 135 4.16e-64 207
Msa1040530 AT5G16770.1 66.667 135 45 0 1 135 1 135 1.00e-63 207
Msa1040530 AT5G16770.2 66.667 135 45 0 1 135 1 135 1.00e-63 207
Msa1040530 AT4G34990.1 58.278 151 63 0 1 151 1 151 1.23e-62 202
Msa1040530 AT3G61250.1 68.217 129 41 0 1 129 1 129 1.80e-62 202
Msa1040530 AT1G63910.1 68.750 128 40 0 1 128 1 128 2.05e-62 204
Msa1040530 AT1G66230.1 67.391 138 45 0 1 138 1 138 9.77e-62 200
Msa1040530 AT2G16720.1 56.410 156 68 0 1 156 1 156 2.86e-61 198
Msa1040530 AT4G21440.1 38.941 321 144 8 1 290 1 300 8.07e-61 199
Msa1040530 AT4G12350.1 52.632 171 81 0 1 171 1 171 2.78e-60 196
Msa1040530 AT5G15310.1 65.909 132 45 0 1 132 1 132 3.05e-60 197
Msa1040530 AT5G16600.1 63.194 144 53 0 1 144 1 144 3.13e-60 197
Msa1040530 AT1G34670.1 65.152 132 46 0 1 132 1 132 3.36e-60 198
Msa1040530 AT5G15310.2 65.909 132 45 0 1 132 1 132 3.82e-60 197
Msa1040530 AT4G38620.1 64.122 131 47 0 1 131 1 131 6.09e-60 195
Msa1040530 AT5G15310.4 65.909 132 45 0 1 132 1 132 6.28e-60 194
Msa1040530 AT4G05100.1 65.891 129 43 1 1 128 1 129 1.43e-59 196
Msa1040530 AT3G01140.2 65.909 132 45 0 1 132 1 132 1.95e-59 196
Msa1040530 AT5G10280.1 63.636 132 48 0 1 132 1 132 2.22e-59 195
Msa1040530 AT1G22640.1 63.359 131 48 0 1 131 1 131 4.78e-59 192
Msa1040530 AT4G22680.1 63.504 137 49 1 1 136 1 137 6.05e-59 192
Msa1040530 AT5G56110.1 65.152 132 46 0 1 132 1 132 6.25e-59 194
Msa1040530 AT4G28110.1 64.844 128 45 0 1 128 1 128 6.65e-59 192
Msa1040530 AT4G09460.1 60.145 138 55 0 1 138 1 138 7.49e-59 191
Msa1040530 AT5G65230.1 64.885 131 46 0 1 131 1 131 1.63e-58 192
Msa1040530 AT5G07690.1 60.000 140 56 0 1 140 1 140 3.43e-57 190
Msa1040530 AT5G60890.1 59.690 129 52 0 1 129 1 129 1.11e-56 187
Msa1040530 AT3G01140.1 66.142 127 43 0 6 132 49 175 1.26e-56 190
Msa1040530 AT5G61420.2 59.712 139 54 1 1 137 1 139 2.09e-56 189
Msa1040530 AT5G14340.1 51.412 177 79 3 1 176 13 183 9.28e-56 184
Msa1040530 AT4G17785.2 63.566 129 46 1 1 128 1 129 1.04e-55 186
Msa1040530 AT4G17785.1 63.566 129 46 1 1 128 1 129 1.14e-55 186
Msa1040530 AT5G12870.1 73.394 109 29 0 10 118 16 124 1.48e-55 184
Msa1040530 AT1G35515.1 60.305 131 52 0 1 131 1 131 1.51e-55 181
Msa1040530 AT2G31180.1 45.685 197 107 0 1 197 1 197 5.73e-55 181
Msa1040530 AT3G13540.1 57.746 142 59 1 6 147 17 157 1.60e-54 180
Msa1040530 AT1G74430.1 62.500 128 48 0 1 128 1 128 2.48e-54 180
Msa1040530 AT3G08500.1 70.085 117 32 1 4 117 19 135 2.64e-54 182
Msa1040530 AT1G18570.1 51.829 164 66 2 1 163 1 152 3.63e-54 182
Msa1040530 AT3G23250.1 46.829 205 83 4 1 192 1 192 7.40e-54 179
Msa1040530 AT5G54230.1 63.281 128 47 0 1 128 1 128 8.65e-54 181
Msa1040530 AT3G28470.1 62.879 132 49 0 1 132 1 132 1.35e-53 180
Msa1040530 AT1G74080.1 51.266 158 75 1 1 158 1 156 3.44e-53 179
Msa1040530 AT5G07700.1 59.231 130 53 0 1 130 1 130 3.53e-53 179
Msa1040530 AT5G07700.2 59.231 130 53 0 1 130 1 130 3.53e-53 179
Msa1040530 AT1G79180.1 67.521 117 38 0 2 118 4 120 8.29e-53 177
Msa1040530 AT5G26660.2 73.394 109 27 1 40 146 9 117 4.48e-52 176
Msa1040530 AT5G62320.1 57.241 145 54 2 2 139 3 146 6.13e-52 173
Msa1040530 AT1G06180.1 65.254 118 41 0 1 118 1 118 1.33e-51 172
Msa1040530 AT3G48920.1 68.468 111 35 0 9 119 15 125 1.63e-51 172
Msa1040530 AT1G16490.1 66.087 115 39 0 2 116 4 118 1.11e-50 171
Msa1040530 AT1G18710.1 57.364 129 55 0 1 129 1 129 6.43e-50 169
Msa1040530 AT1G56160.1 65.217 115 40 0 2 116 4 118 8.38e-50 169
Msa1040530 AT4G25560.1 70.370 108 32 0 8 115 6 113 3.17e-48 165
Msa1040530 AT2G47460.1 59.091 132 54 0 1 132 1 132 7.24e-48 166
Msa1040530 AT5G23000.1 62.393 117 43 1 1 116 1 117 1.39e-47 164
Msa1040530 AT5G57620.1 60.800 125 46 2 1 122 1 125 3.98e-47 163
Msa1040530 AT3G62610.1 62.931 116 43 0 1 116 1 116 5.03e-47 163
Msa1040530 AT5G49330.1 63.793 116 42 0 1 116 1 116 5.23e-47 163
Msa1040530 AT5G52260.1 71.028 107 31 0 9 115 9 115 1.40e-46 160
Msa1040530 AT3G12820.1 61.538 117 45 0 3 119 5 121 2.53e-46 159
Msa1040530 AT1G79180.2 52.667 150 38 1 2 118 4 153 5.93e-46 160
Msa1040530 AT3G49690.1 61.667 120 45 1 1 119 1 120 6.44e-46 159
Msa1040530 AT5G65790.1 60.833 120 46 1 1 119 1 120 6.66e-46 161
Msa1040530 AT3G47600.1 57.627 118 50 0 1 118 1 118 7.73e-45 157
Msa1040530 AT1G74650.1 60.345 116 46 0 1 116 1 116 8.88e-45 157
Msa1040530 AT5G06100.1 46.951 164 84 2 10 173 30 190 2.86e-44 159
Msa1040530 AT5G62470.2 57.627 118 50 0 1 118 1 118 3.31e-44 156
Msa1040530 AT1G08810.1 45.349 172 77 1 1 172 1 155 5.55e-44 154
Msa1040530 AT2G36890.1 55.906 127 55 1 1 126 1 127 5.60e-44 154
Msa1040530 AT5G35550.1 40.083 242 126 7 9 241 11 242 5.89e-44 153
Msa1040530 AT2G36890.2 55.906 127 55 1 1 126 42 168 9.09e-44 155
Msa1040530 AT5G06100.5 46.951 164 84 2 10 173 30 190 1.32e-43 158
Msa1040530 AT5G06100.2 46.951 164 84 2 10 173 30 190 1.32e-43 158
Msa1040530 AT5G06100.3 46.951 164 84 2 10 173 30 190 1.32e-43 158
Msa1040530 AT5G06100.4 46.951 164 84 2 10 173 30 190 1.32e-43 158
Msa1040530 AT4G37780.1 58.333 120 49 1 1 119 1 120 2.68e-43 152
Msa1040530 AT5G14750.1 58.654 104 43 0 13 116 17 120 3.98e-43 149
Msa1040530 AT5G62470.1 57.627 118 49 1 1 118 1 117 2.42e-42 151
Msa1040530 AT3G01530.1 54.310 116 53 0 12 127 25 140 2.78e-42 147
Msa1040530 AT3G27810.1 55.856 111 49 0 11 121 19 129 3.39e-42 147
Msa1040530 AT5G40330.1 57.692 104 44 0 13 116 13 116 4.03e-42 147
Msa1040530 AT3G28910.1 56.897 116 50 0 1 116 1 116 9.79e-42 149
Msa1040530 AT3G27920.1 55.140 107 48 0 10 116 12 118 1.66e-41 145
Msa1040530 AT4G26930.1 61.682 107 41 0 12 118 19 125 2.81e-41 149
Msa1040530 AT2G26960.1 42.775 173 85 3 9 168 17 188 2.98e-41 150
Msa1040530 AT5G40350.1 56.364 110 48 0 11 120 16 125 5.60e-41 144
Msa1040530 AT5G52600.1 49.254 134 59 1 9 133 9 142 5.78e-41 143
Msa1040530 AT3G11440.2 51.880 133 61 2 12 144 41 170 7.94e-41 150
Msa1040530 AT5G55020.1 60.748 107 42 0 12 118 26 132 9.11e-41 150
Msa1040530 AT3G11440.3 50.735 136 64 2 9 144 38 170 2.49e-40 150
Msa1040530 AT3G11440.4 50.735 136 64 2 9 144 38 170 2.49e-40 150
Msa1040530 AT3G11440.1 50.735 136 64 2 9 144 38 170 2.49e-40 150
Msa1040530 AT1G25340.1 54.167 120 55 0 13 132 19 138 1.31e-39 142
Msa1040530 AT2G32460.1 49.618 131 65 1 10 140 16 145 1.91e-39 146
Msa1040530 AT2G32460.2 49.618 131 65 1 10 140 4 133 2.04e-39 146
Msa1040530 AT1G68320.1 52.381 126 60 0 10 135 17 142 4.33e-39 141
Msa1040530 AT3G30210.1 47.651 149 76 2 13 159 28 176 4.49e-39 140
Msa1040530 AT4G13480.1 60.952 105 41 0 13 117 7 111 5.19e-39 140
Msa1040530 AT3G24310.1 60.000 105 42 0 13 117 19 123 7.52e-39 140
Msa1040530 AT1G48000.1 57.692 104 44 0 11 114 31 134 4.13e-38 137
Msa1040530 AT1G66370.1 48.921 139 65 2 12 144 8 146 2.89e-37 135
Msa1040530 AT2G47190.1 51.351 111 54 0 12 122 20 130 9.33e-37 134
Msa1040530 AT5G59780.3 53.153 111 52 0 9 119 5 115 3.18e-36 132
Msa1040530 AT3G53200.1 56.075 107 47 0 9 115 6 112 9.81e-36 130
Msa1040530 AT3G60460.1 52.101 119 50 2 9 126 8 120 1.44e-35 132
Msa1040530 AT3G46130.1 54.206 107 49 0 13 119 10 116 1.47e-35 131
Msa1040530 AT2G26950.1 48.696 115 56 1 6 120 10 121 1.95e-35 134
Msa1040530 AT1G25340.2 51.667 120 53 1 13 132 19 133 9.69e-35 129
Msa1040530 AT3G06490.1 58.559 111 46 0 12 122 19 129 1.34e-34 130
Msa1040530 AT1G25340.3 51.667 120 53 1 13 132 19 133 2.34e-34 129
Msa1040530 AT1G66380.1 60.577 104 41 0 12 115 8 111 2.98e-34 124
Msa1040530 AT1G56650.1 52.000 125 52 1 12 128 8 132 3.12e-34 127
Msa1040530 AT1G66390.1 58.491 106 44 0 10 115 6 111 2.05e-32 122
Msa1040530 AT5G49620.1 54.955 111 50 0 12 122 26 136 2.66e-32 123
Msa1040530 AT5G35550.2 39.806 206 105 7 45 241 50 245 2.63e-31 119
Msa1040530 AT3G12820.2 69.444 72 22 0 48 119 2 73 8.99e-31 116
Msa1040530 AT3G27810.2 59.740 77 31 0 45 121 4 80 8.30e-30 113
Msa1040530 AT5G14750.3 63.636 77 25 1 40 116 13 86 8.47e-30 113
Msa1040530 AT5G49620.2 48.800 125 50 1 12 122 26 150 8.96e-29 114
Msa1040530 AT1G22640.3 64.865 74 26 0 58 131 1 74 1.00e-28 111
Msa1040530 AT5G40350.2 60.526 76 30 0 45 120 5 80 2.50e-28 109
Msa1040530 AT3G46130.3 61.842 76 29 0 44 119 9 84 3.40e-28 110
Msa1040530 AT3G47600.2 53.125 96 41 1 23 118 21 112 3.61e-28 112
Msa1040530 AT3G46130.4 61.039 77 30 0 43 119 18 94 7.66e-28 109
Msa1040530 AT1G18960.1 45.455 121 59 4 14 132 10 125 7.72e-28 111
Msa1040530 AT3G53200.2 63.158 76 28 0 40 115 4 79 7.77e-28 108
Msa1040530 AT5G59780.2 61.039 77 30 0 43 119 18 94 7.82e-28 109
Msa1040530 AT4G18770.1 45.946 111 59 1 9 119 212 321 1.91e-27 112
Msa1040530 AT3G27785.1 44.167 120 62 3 9 125 184 301 4.92e-26 108
Msa1040530 AT5G67300.1 50.980 102 49 1 14 115 6 106 7.15e-26 106
Msa1040530 AT5G02320.1 48.571 105 53 1 12 116 125 228 1.59e-25 108
Msa1040530 AT5G02320.2 48.571 105 53 1 12 116 125 228 1.59e-25 108
Msa1040530 AT5G02320.3 48.571 105 53 1 12 116 65 168 1.73e-25 107
Msa1040530 AT4G37260.1 50.467 107 52 1 14 120 13 118 2.00e-25 105
Msa1040530 AT1G71030.2 55.844 77 34 0 51 127 5 81 2.04e-25 101
Msa1040530 AT3G09370.2 50.000 104 51 1 12 115 133 235 2.06e-25 107
Msa1040530 AT3G09370.1 50.000 104 51 1 12 115 128 230 2.24e-25 107
Msa1040530 AT5G40360.1 42.453 106 60 1 9 114 153 257 2.51e-25 105
Msa1040530 AT1G71030.1 55.844 77 34 0 51 127 19 95 2.70e-25 102
Msa1040530 AT3G50060.1 40.127 157 89 3 14 170 6 157 3.46e-25 104
Msa1040530 AT3G09370.3 50.000 104 51 1 12 115 141 243 3.50e-25 107
Msa1040530 AT2G39880.1 53.398 103 45 2 14 115 50 150 4.45e-25 105
Msa1040530 AT3G55730.1 53.398 103 45 2 14 115 56 156 7.55e-25 105
Msa1040530 AT5G58850.1 38.760 129 73 2 10 138 101 223 9.03e-25 105
Msa1040530 AT3G09230.1 47.573 103 53 1 14 116 55 156 1.82e-24 103
Msa1040530 AT1G17950.1 42.453 106 60 1 14 119 5 109 1.86e-24 100
Msa1040530 AT1G69560.1 41.964 112 62 2 9 119 102 211 1.96e-24 102
Msa1040530 AT1G69560.2 41.964 112 62 2 9 119 118 227 2.58e-24 102
Msa1040530 AT5G11510.3 47.170 106 55 1 11 116 78 182 2.67e-24 105
Msa1040530 AT5G11510.1 47.170 106 55 1 11 116 78 182 2.67e-24 105
Msa1040530 AT5G11510.4 47.170 106 55 1 11 116 78 182 2.67e-24 105
Msa1040530 AT2G23290.1 50.980 102 49 1 14 115 13 113 2.79e-24 102
Msa1040530 AT3G23250.2 41.892 148 60 4 58 192 1 135 2.83e-24 100
Msa1040530 AT5G11050.1 42.157 102 58 1 14 115 105 205 3.16e-24 103
Msa1040530 AT5G11510.2 47.170 106 55 1 11 116 78 182 4.40e-24 104
Msa1040530 AT5G11510.5 47.170 106 55 1 11 116 78 182 4.57e-24 104
Msa1040530 AT4G32730.5 46.226 106 56 1 11 116 84 188 1.15e-23 103
Msa1040530 AT4G32730.4 46.226 106 56 1 11 116 84 188 1.15e-23 103
Msa1040530 AT4G32730.3 46.226 106 56 1 11 116 84 188 1.15e-23 103
Msa1040530 AT4G32730.2 46.226 106 56 1 11 116 84 188 1.15e-23 103
Msa1040530 AT4G32730.1 46.226 106 56 1 11 116 84 188 1.34e-23 103
Msa1040530 AT1G26780.1 43.519 108 58 2 12 118 96 201 1.68e-23 99.0
Msa1040530 AT1G26780.2 43.519 108 58 2 12 118 96 201 2.08e-23 100
Msa1040530 AT1G73410.1 46.226 106 54 2 14 118 6 109 2.09e-23 97.8
Msa1040530 AT1G73410.2 46.226 106 54 2 14 118 6 109 5.83e-23 95.9
Msa1040530 AT1G66380.3 63.380 71 26 0 45 115 8 78 1.32e-22 91.7
Msa1040530 AT2G25230.1 39.837 123 71 2 9 129 21 142 2.52e-22 94.7
Msa1040530 AT1G66380.2 55.422 83 37 0 10 92 6 88 7.63e-22 89.7
Msa1040530 AT4G33450.1 37.190 121 72 2 1 118 3 122 8.39e-22 93.6
Msa1040530 AT3G29020.2 39.623 106 63 1 14 119 67 171 1.62e-21 94.0
Msa1040530 AT3G29020.1 39.623 106 63 1 14 119 65 169 1.97e-21 92.4
Msa1040530 AT5G17800.1 39.048 105 63 1 14 118 93 196 2.36e-21 94.0
Msa1040530 AT5G14750.4 62.712 59 22 0 58 116 1 59 5.64e-21 88.6
Msa1040530 AT5G14750.2 62.712 59 22 0 58 116 1 59 5.64e-21 88.6
Msa1040530 AT2G02820.3 37.815 119 72 2 4 121 19 136 3.21e-19 88.2
Msa1040530 AT2G02820.1 37.815 119 72 2 4 121 19 136 3.58e-19 89.0
Msa1040530 AT2G02820.2 37.815 119 72 2 4 121 19 136 4.63e-19 89.0
Msa1040530 AT4G00540.2 41.818 110 60 2 12 118 101 209 1.37e-18 87.0
Msa1040530 AT5G40430.1 38.393 112 67 2 9 120 49 158 1.78e-18 84.7
Msa1040530 AT4G00540.1 41.818 110 60 2 12 118 99 207 2.40e-18 86.7
Msa1040530 AT1G14350.2 39.048 105 63 1 17 121 28 131 5.61e-18 85.5
Msa1040530 AT1G14350.1 39.048 105 63 1 17 121 28 131 5.61e-18 85.5
Msa1040530 AT5G61420.1 64.407 59 19 1 81 137 2 60 1.96e-17 82.0
Msa1040530 AT2G37630.1 36.522 115 66 2 17 124 7 121 3.11e-17 82.8
Msa1040530 AT5G39700.1 33.621 116 76 1 9 124 51 165 4.30e-16 76.3
Msa1040530 AT1G74430.2 59.615 52 21 0 77 128 8 59 3.81e-15 73.9
Msa1040530 AT4G28110.2 70.732 41 12 0 88 128 4 44 2.33e-14 71.6
Msa1040530 AT5G15310.3 68.889 45 14 0 88 132 9 53 1.08e-13 70.9
Msa1040530 AT5G59780.1 59.574 47 19 0 73 119 4 50 2.92e-13 67.8
Msa1040530 AT3G46130.2 59.574 47 19 0 73 119 4 50 3.82e-13 68.2
Msa1040530 AT4G25560.2 71.111 45 13 0 71 115 3 47 4.14e-13 68.6
Msa1040530 AT5G14340.2 39.535 86 45 3 88 172 10 89 6.93e-13 67.0
Msa1040530 AT1G14350.3 43.939 66 37 0 56 121 23 88 3.08e-12 67.8
Msa1040530 AT1G14350.4 43.939 66 37 0 56 121 23 88 3.08e-12 67.8
Msa1040530 AT1G22640.2 61.364 44 17 0 88 131 16 59 4.77e-12 64.7
Msa1040530 AT3G18100.1 36.458 96 60 1 13 108 545 639 1.83e-11 66.2
Msa1040530 AT3G18100.4 36.458 96 60 1 13 108 384 478 2.17e-11 65.9
Msa1040530 AT3G18100.3 36.458 96 60 1 13 108 497 591 2.58e-11 65.9
Msa1040530 AT3G18100.2 36.458 96 60 1 13 108 332 426 2.68e-11 65.5

Find 104 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAAGAGTTTGGATTATT+TGG 0.116986 7_1:+77915455 None:intergenic
TGACATAAAGAATGACTTTA+AGG 0.129670 7_1:-77914970 Msa1040530:three_prime_UTR
GATTTAGGCCCTGATGGTTT+AGG 0.252849 7_1:-77915074 Msa1040530:CDS
TTTCCCTTTATTAATTTCTA+AGG 0.253974 7_1:-77914835 Msa1040530:three_prime_UTR
TCTTATAATATAGCAGCTTT+TGG 0.280061 7_1:-77915011 Msa1040530:CDS
AACTACTAACAAACTACAAA+TGG 0.300202 7_1:-77916460 Msa1040530:exon
GATAAGATACTATTCTTCAT+AGG 0.304611 7_1:+77915254 None:intergenic
TTTGTAGTTTGTTAGTAGTT+TGG 0.311975 7_1:+77916463 None:intergenic
ATTTAGGCCCTGATGGTTTA+GGG 0.313997 7_1:-77915073 Msa1040530:CDS
AGAATAGTATCTTATCTTCT+TGG 0.317415 7_1:-77915247 Msa1040530:CDS
AGTGAAACTAGTTATGGATA+TGG 0.320341 7_1:+77914719 None:intergenic
ATAAAGCCTGCCACAGATTT+AGG 0.320366 7_1:-77915089 Msa1040530:CDS
ATAATGAAATAAAGAATCTT+TGG 0.322110 7_1:-77915799 Msa1040530:CDS
AAAGGTGTGGTAAGAGTTGC+AGG 0.322879 7_1:-77916178 Msa1040530:CDS
ATATACAGAAACAAAATATT+TGG 0.325432 7_1:+77914910 None:intergenic
GAATAGTATCTTATCTTCTT+GGG 0.325673 7_1:-77915246 Msa1040530:CDS
CAGAAAGATTGTTGGATTTG+TGG 0.335677 7_1:+77916532 None:intergenic
TGAAGATTGTTTAGGCTCAT+AGG 0.335997 7_1:+77915586 None:intergenic
CACACCTTAGAAATTAATAA+AGG 0.340536 7_1:+77914831 None:intergenic
GTGGGTAGAATTGCAAAATA+AGG 0.343670 7_1:-77914811 Msa1040530:three_prime_UTR
TTGAACCAATGAGAAGAGTT+TGG 0.356074 7_1:+77915446 None:intergenic
CTGATAAACAGAAAGATTGT+TGG 0.356491 7_1:+77916524 None:intergenic
ATAGGAAACAGCATCTGATT+TGG 0.364879 7_1:+77915604 None:intergenic
GGAAGAAATGAGGTATTAGT+TGG 0.366998 7_1:+77915350 None:intergenic
CAAAGGTTATTCAACTGAAA+TGG 0.369898 7_1:-77915555 Msa1040530:CDS
AGGACAATTGAAGATTGTTT+AGG 0.372326 7_1:+77915578 None:intergenic
ATATTTCTGCTGCTTTCTCT+TGG 0.373195 7_1:+77915669 None:intergenic
TTGAATCATATTACTAAATA+CGG 0.383125 7_1:-77916366 Msa1040530:CDS
TTCTTGTTCCAACTATTTGA+TGG 0.388346 7_1:-77915522 Msa1040530:CDS
ATTGAACTTCATTCAGTACT+AGG 0.389828 7_1:-77916083 Msa1040530:CDS
TCTCATTGGTTCAACCAAAC+AGG 0.390750 7_1:-77915437 Msa1040530:CDS
GATGTGTAATTCATCTGAAT+AGG 0.392658 7_1:+77915491 None:intergenic
GAGATTAGTCATTGCGATAA+TGG 0.397964 7_1:+77914638 None:intergenic
ATAATCCAAACTCTTCTCAT+TGG 0.399767 7_1:-77915451 Msa1040530:CDS
GTAATTTCCCATCAAATAGT+TGG 0.401184 7_1:+77915514 None:intergenic
GACATAAAGAATGACTTTAA+GGG 0.409119 7_1:-77914969 Msa1040530:three_prime_UTR
TTGAGAAGATTCTTGTTGCT+TGG 0.413002 7_1:+77915034 None:intergenic
AAGTACTTTCTGATCTCATA+AGG 0.429540 7_1:+77915627 None:intergenic
CAAATTGCTGCACAATTGCC+AGG 0.435074 7_1:-77915830 Msa1040530:CDS
AAAGAAGAAACTGAGACAAA+AGG 0.438499 7_1:-77915765 Msa1040530:CDS
AATTCAGAGTTCATGTCAAA+AGG 0.443007 7_1:+77915407 None:intergenic
ATTATGTCCCCTAAACCATC+AGG 0.449694 7_1:+77915065 None:intergenic
ACACCTTAGAAATTAATAAA+GGG 0.458066 7_1:+77914832 None:intergenic
TTCATTCAGTACTAGGGAAT+AGG 0.458093 7_1:-77916076 Msa1040530:intron
GAAGAAATGAGGTATTAGTT+GGG 0.458948 7_1:+77915351 None:intergenic
CTTTATTAATTTCTAAGGTG+TGG 0.460445 7_1:-77914830 Msa1040530:three_prime_UTR
CATTGTATTTGTAAGTTTGA+GGG 0.460795 7_1:-77916487 Msa1040530:five_prime_UTR
TTTCAGTTGAATAACCTTTG+AGG 0.461827 7_1:+77915558 None:intergenic
GAAAGTGGCTTATGAGTGAC+AGG 0.463023 7_1:+77915734 None:intergenic
GTGGTAAGAGTTGCAGGCTT+AGG 0.466298 7_1:-77916172 Msa1040530:CDS
TGTTTGATTCTCTTTAATAG+AGG 0.466549 7_1:+77915205 None:intergenic
TCATTGTATTTGTAAGTTTG+AGG 0.467013 7_1:-77916488 Msa1040530:five_prime_UTR
AAGAAGAAACTGAGACAAAA+GGG 0.474216 7_1:-77915764 Msa1040530:CDS
ATATATATACCTGCTTGCTT+AGG 0.475599 7_1:+77916321 None:intergenic
GTTGCTACAAGCAGAAGCTT+AGG 0.481348 7_1:-77916425 Msa1040530:CDS
GCCACAGATTTAGGCCCTGA+TGG 0.492844 7_1:-77915080 Msa1040530:CDS
ACTACTAACAAACTACAAAT+GGG 0.496487 7_1:-77916459 Msa1040530:exon
TCTTGTTCCAACTATTTGAT+GGG 0.507060 7_1:-77915521 Msa1040530:CDS
ATAAGATACTATTCTTCATA+GGG 0.510246 7_1:+77915255 None:intergenic
ATGTGTAATTCATCTGAATA+GGG 0.511653 7_1:+77915492 None:intergenic
TCTGTTTCAGTGATGCACTT+AGG 0.512660 7_1:-77914762 Msa1040530:three_prime_UTR
TTTATTAATTTCTAAGGTGT+GGG 0.516023 7_1:-77914829 Msa1040530:three_prime_UTR
GGTAGAAAATGTTGATGAAG+AGG 0.516385 7_1:-77915708 Msa1040530:CDS
AGAAGCTTAGGAAAGGTCTA+TGG 0.519654 7_1:-77916413 Msa1040530:CDS
AAGAGACTGACATAAATGTT+TGG 0.520011 7_1:+77914878 None:intergenic
CTAAATACGGTCATGGATGT+TGG 0.521077 7_1:-77916353 Msa1040530:CDS
GTAAGAGTTGCAGGCTTAGG+TGG 0.530842 7_1:-77916169 Msa1040530:CDS
ACATAAAGAATGACTTTAAG+GGG 0.532819 7_1:-77914968 Msa1040530:three_prime_UTR
AAAAGTATTGGGAAGAAATG+AGG 0.537696 7_1:+77915340 None:intergenic
CAATCTTCAATTGTCCTCAA+AGG 0.538889 7_1:-77915572 Msa1040530:CDS
ATTTCATTATCAGTCCTCCC+TGG 0.548205 7_1:+77915812 None:intergenic
TTGAACTTCATTCAGTACTA+GGG 0.552884 7_1:-77916082 Msa1040530:CDS
CATATTACTAAATACGGTCA+TGG 0.556180 7_1:-77916360 Msa1040530:CDS
AGGTCTATGGTCACCTGAGG+AGG 0.556622 7_1:-77916400 Msa1040530:CDS
TTAGGTGGATTAATTACTTG+AGG 0.558206 7_1:-77916154 Msa1040530:CDS
CACTCATAAGCCACTTTCTG+AGG 0.558601 7_1:-77915729 Msa1040530:CDS
TTATTCAACTGAAATGGAAG+TGG 0.560042 7_1:-77915549 Msa1040530:CDS
AATAGTATCTTATCTTCTTG+GGG 0.560835 7_1:-77915245 Msa1040530:CDS
TTATTGGCACAGGTCTTCAA+AGG 0.561994 7_1:-77916196 Msa1040530:intron
ACACACAATCTGAAATCCCT+TGG 0.563897 7_1:+77914943 None:intergenic
TCAGGGCCTAAATCTGTGGC+AGG 0.565813 7_1:+77915083 None:intergenic
TCAACTGAAATGGAAGTGGA+AGG 0.579991 7_1:-77915545 Msa1040530:CDS
GTGAAGATACTCATTCCACT+TGG 0.581545 7_1:+77915163 None:intergenic
AGTTCAGTTCCTAAGCAAGC+AGG 0.581863 7_1:-77916330 Msa1040530:intron
TTTAGGCCCTGATGGTTTAG+GGG 0.584861 7_1:-77915072 Msa1040530:CDS
GACATAGAAACATCTTGTGA+AGG 0.586534 7_1:+77915290 None:intergenic
ATTATTTGGAATATTATCAG+TGG 0.586790 7_1:+77915469 None:intergenic
AAGAAATGAGGTATTAGTTG+GGG 0.597506 7_1:+77915352 None:intergenic
ATGACTTTAAGGGGCACCAA+GGG 0.597525 7_1:-77914959 Msa1040530:three_prime_UTR
GAAGGAACATCAGCAAGTGA+TGG 0.610340 7_1:+77915308 None:intergenic
ACCATCAGGGCCTAAATCTG+TGG 0.616487 7_1:+77915079 None:intergenic
GGCACAGGTCTTCAAAGGTG+TGG 0.623503 7_1:-77916191 Msa1040530:intron
AATGACTTTAAGGGGCACCA+AGG 0.627989 7_1:-77914960 Msa1040530:three_prime_UTR
TCAGTCTCTTCATATTTGTG+AGG 0.638414 7_1:-77914865 Msa1040530:three_prime_UTR
GATTCTTGTTGCTTGGAATG+TGG 0.641176 7_1:+77915041 None:intergenic
AAATTGCTGCACAATTGCCA+GGG 0.642018 7_1:-77915829 Msa1040530:CDS
TTGCTGCACAATTGCCAGGG+AGG 0.646864 7_1:-77915826 Msa1040530:CDS
TACAAGCAGAAGCTTAGGAA+AGG 0.647918 7_1:-77916420 Msa1040530:CDS
GAAAGGTCTATGGTCACCTG+AGG 0.676025 7_1:-77916403 Msa1040530:CDS
ATGCACTTAGGAAATTACAA+TGG 0.678705 7_1:-77914750 Msa1040530:three_prime_UTR
TTATGTCCCCTAAACCATCA+GGG 0.688532 7_1:+77915066 None:intergenic
AGAAATGAGGTATTAGTTGG+GGG 0.699843 7_1:+77915353 None:intergenic
GATACATAGAATATATGACA+TGG 0.715563 7_1:+77914664 None:intergenic
AAAGTGGCTTATGAGTGACA+GGG 0.769750 7_1:+77915735 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAATCATATTACTAAATA+CGG - chr7_1:77914834-77914853 Msa1040530:three_prime_UTR 15.0%
!! GAGATTGAATTATTAAAATT+TGG + chr7_1:77914916-77914935 None:intergenic 15.0%
!!! TATTTGTCAATGTATTTTAT+TGG - chr7_1:77914988-77915007 Msa1040530:exon 15.0%
!! AAAACATTATCATAATAAGA+AGG + chr7_1:77915164-77915183 None:intergenic 15.0%
!!! TGTATTTTTTAATTGTTATG+TGG - chr7_1:77915272-77915291 Msa1040530:CDS 15.0%
!! ATAATGAAATAAAGAATCTT+TGG - chr7_1:77915401-77915420 Msa1040530:CDS 15.0%
!! ATATACAGAAACAAAATATT+TGG + chr7_1:77916293-77916312 None:intergenic 15.0%
!! TTGAATCATATTACTAAATA+CGG - chr7_1:77914834-77914853 Msa1040530:three_prime_UTR 15.0%
!! GAGATTGAATTATTAAAATT+TGG + chr7_1:77914916-77914935 None:intergenic 15.0%
!!! TATTTGTCAATGTATTTTAT+TGG - chr7_1:77914988-77915007 Msa1040530:exon 15.0%
!! AAAACATTATCATAATAAGA+AGG + chr7_1:77915164-77915183 None:intergenic 15.0%
!!! TGTATTTTTTAATTGTTATG+TGG - chr7_1:77915272-77915291 Msa1040530:CDS 15.0%
!! ATAATGAAATAAAGAATCTT+TGG - chr7_1:77915401-77915420 Msa1040530:CDS 15.0%
!! ATATACAGAAACAAAATATT+TGG + chr7_1:77916293-77916312 None:intergenic 15.0%
!! ATTATCATAATAAGAAGGAT+TGG + chr7_1:77915159-77915178 None:intergenic 20.0%
!!! ATTATTTGGAATATTATCAG+TGG + chr7_1:77915734-77915753 None:intergenic 20.0%
!! ATAAGATACTATTCTTCATA+GGG + chr7_1:77915948-77915967 None:intergenic 20.0%
!! TTTCCCTTTATTAATTTCTA+AGG - chr7_1:77916365-77916384 Msa1040530:CDS 20.0%
!! ACACCTTAGAAATTAATAAA+GGG + chr7_1:77916371-77916390 None:intergenic 20.0%
!!! TTTATTAATTTCTAAGGTGT+GGG - chr7_1:77916371-77916390 Msa1040530:CDS 20.0%
!! ATTATCATAATAAGAAGGAT+TGG + chr7_1:77915159-77915178 None:intergenic 20.0%
!!! ATTATTTGGAATATTATCAG+TGG + chr7_1:77915734-77915753 None:intergenic 20.0%
!! ATAAGATACTATTCTTCATA+GGG + chr7_1:77915948-77915967 None:intergenic 20.0%
!! TTTCCCTTTATTAATTTCTA+AGG - chr7_1:77916365-77916384 Msa1040530:CDS 20.0%
!! ACACCTTAGAAATTAATAAA+GGG + chr7_1:77916371-77916390 None:intergenic 20.0%
!!! TTTATTAATTTCTAAGGTGT+GGG - chr7_1:77916371-77916390 Msa1040530:CDS 20.0%
! TCATTGTATTTGTAAGTTTG+AGG - chr7_1:77914712-77914731 Msa1040530:three_prime_UTR 25.0%
! CATTGTATTTGTAAGTTTGA+GGG - chr7_1:77914713-77914732 Msa1040530:three_prime_UTR 25.0%
!!! TTTGTAGTTTGTTAGTAGTT+TGG + chr7_1:77914740-77914759 None:intergenic 25.0%
! AACTACTAACAAACTACAAA+TGG - chr7_1:77914740-77914759 Msa1040530:three_prime_UTR 25.0%
! ACTACTAACAAACTACAAAT+GGG - chr7_1:77914741-77914760 Msa1040530:three_prime_UTR 25.0%
! TCTCTTGATTATATGCTAAA+AGG + chr7_1:77914938-77914957 None:intergenic 25.0%
!! AATGTACCTCTTTTTAAATC+AGG + chr7_1:77915072-77915091 None:intergenic 25.0%
! TTTAATTGTTATGTGGTTGT+TGG - chr7_1:77915279-77915298 Msa1040530:CDS 25.0%
!! ATATGATGTGTTTTCTTAGA+TGG - chr7_1:77915344-77915363 Msa1040530:CDS 25.0%
! ATGTGTAATTCATCTGAATA+GGG + chr7_1:77915711-77915730 None:intergenic 25.0%
! GATAAGATACTATTCTTCAT+AGG + chr7_1:77915949-77915968 None:intergenic 25.0%
! AGAATAGTATCTTATCTTCT+TGG - chr7_1:77915953-77915972 Msa1040530:intron 25.0%
! GAATAGTATCTTATCTTCTT+GGG - chr7_1:77915954-77915973 Msa1040530:intron 25.0%
! AATAGTATCTTATCTTCTTG+GGG - chr7_1:77915955-77915974 Msa1040530:intron 25.0%
! TGTTTGATTCTCTTTAATAG+AGG + chr7_1:77915998-77916017 None:intergenic 25.0%
!! TGATTTTGTAGCATTAACAT+TGG + chr7_1:77916066-77916085 None:intergenic 25.0%
!! TCTTATAATATAGCAGCTTT+TGG - chr7_1:77916189-77916208 Msa1040530:intron 25.0%
! TGACATAAAGAATGACTTTA+AGG - chr7_1:77916230-77916249 Msa1040530:intron 25.0%
! GACATAAAGAATGACTTTAA+GGG - chr7_1:77916231-77916250 Msa1040530:intron 25.0%
! ACATAAAGAATGACTTTAAG+GGG - chr7_1:77916232-77916251 Msa1040530:intron 25.0%
! CACACCTTAGAAATTAATAA+AGG + chr7_1:77916372-77916391 None:intergenic 25.0%
!!! CTTTATTAATTTCTAAGGTG+TGG - chr7_1:77916370-77916389 Msa1040530:CDS 25.0%
! TGAAAAAGTGAAACTAGTTA+TGG + chr7_1:77916490-77916509 None:intergenic 25.0%
!!! ACTAGTTTCACTTTTTCAAT+TGG - chr7_1:77916492-77916511 Msa1040530:five_prime_UTR 25.0%
!!! CTAGTTTCACTTTTTCAATT+GGG - chr7_1:77916493-77916512 Msa1040530:five_prime_UTR 25.0%
! GATACATAGAATATATGACA+TGG + chr7_1:77916539-77916558 None:intergenic 25.0%
! TCATTGTATTTGTAAGTTTG+AGG - chr7_1:77914712-77914731 Msa1040530:three_prime_UTR 25.0%
! CATTGTATTTGTAAGTTTGA+GGG - chr7_1:77914713-77914732 Msa1040530:three_prime_UTR 25.0%
!!! TTTGTAGTTTGTTAGTAGTT+TGG + chr7_1:77914740-77914759 None:intergenic 25.0%
! AACTACTAACAAACTACAAA+TGG - chr7_1:77914740-77914759 Msa1040530:three_prime_UTR 25.0%
! ACTACTAACAAACTACAAAT+GGG - chr7_1:77914741-77914760 Msa1040530:three_prime_UTR 25.0%
! TCTCTTGATTATATGCTAAA+AGG + chr7_1:77914938-77914957 None:intergenic 25.0%
!! AATGTACCTCTTTTTAAATC+AGG + chr7_1:77915072-77915091 None:intergenic 25.0%
! TTTAATTGTTATGTGGTTGT+TGG - chr7_1:77915279-77915298 Msa1040530:CDS 25.0%
!! ATATGATGTGTTTTCTTAGA+TGG - chr7_1:77915344-77915363 Msa1040530:CDS 25.0%
! ATGTGTAATTCATCTGAATA+GGG + chr7_1:77915711-77915730 None:intergenic 25.0%
! GATAAGATACTATTCTTCAT+AGG + chr7_1:77915949-77915968 None:intergenic 25.0%
! AGAATAGTATCTTATCTTCT+TGG - chr7_1:77915953-77915972 Msa1040530:intron 25.0%
! GAATAGTATCTTATCTTCTT+GGG - chr7_1:77915954-77915973 Msa1040530:intron 25.0%
! AATAGTATCTTATCTTCTTG+GGG - chr7_1:77915955-77915974 Msa1040530:intron 25.0%
! TGTTTGATTCTCTTTAATAG+AGG + chr7_1:77915998-77916017 None:intergenic 25.0%
!! TGATTTTGTAGCATTAACAT+TGG + chr7_1:77916066-77916085 None:intergenic 25.0%
!! TCTTATAATATAGCAGCTTT+TGG - chr7_1:77916189-77916208 Msa1040530:intron 25.0%
! TGACATAAAGAATGACTTTA+AGG - chr7_1:77916230-77916249 Msa1040530:intron 25.0%
! GACATAAAGAATGACTTTAA+GGG - chr7_1:77916231-77916250 Msa1040530:intron 25.0%
! ACATAAAGAATGACTTTAAG+GGG - chr7_1:77916232-77916251 Msa1040530:intron 25.0%
! CACACCTTAGAAATTAATAA+AGG + chr7_1:77916372-77916391 None:intergenic 25.0%
!!! CTTTATTAATTTCTAAGGTG+TGG - chr7_1:77916370-77916389 Msa1040530:CDS 25.0%
! TGAAAAAGTGAAACTAGTTA+TGG + chr7_1:77916490-77916509 None:intergenic 25.0%
!!! ACTAGTTTCACTTTTTCAAT+TGG - chr7_1:77916492-77916511 Msa1040530:five_prime_UTR 25.0%
!!! CTAGTTTCACTTTTTCAATT+GGG - chr7_1:77916493-77916512 Msa1040530:five_prime_UTR 25.0%
! GATACATAGAATATATGACA+TGG + chr7_1:77916539-77916558 None:intergenic 25.0%
CTGATAAACAGAAAGATTGT+TGG + chr7_1:77914679-77914698 None:intergenic 30.0%
CATATTACTAAATACGGTCA+TGG - chr7_1:77914840-77914859 Msa1040530:three_prime_UTR 30.0%
ATATATATACCTGCTTGCTT+AGG + chr7_1:77914882-77914901 None:intergenic 30.0%
! TCAATGTATTTTATTGGCAC+AGG - chr7_1:77914994-77915013 Msa1040530:exon 30.0%
!! TTAGGTGGATTAATTACTTG+AGG - chr7_1:77915046-77915065 Msa1040530:CDS 30.0%
ATTGAACTTCATTCAGTACT+AGG - chr7_1:77915117-77915136 Msa1040530:CDS 30.0%
TTGAACTTCATTCAGTACTA+GGG - chr7_1:77915118-77915137 Msa1040530:CDS 30.0%
ATATCATATGCATGTCAACA+AGG + chr7_1:77915328-77915347 None:intergenic 30.0%
AAAGAAGAAACTGAGACAAA+AGG - chr7_1:77915435-77915454 Msa1040530:CDS 30.0%
AAGAAGAAACTGAGACAAAA+GGG - chr7_1:77915436-77915455 Msa1040530:CDS 30.0%
AAGTACTTTCTGATCTCATA+AGG + chr7_1:77915576-77915595 None:intergenic 30.0%
AGGACAATTGAAGATTGTTT+AGG + chr7_1:77915625-77915644 None:intergenic 30.0%
TTTCAGTTGAATAACCTTTG+AGG + chr7_1:77915645-77915664 None:intergenic 30.0%
CAAAGGTTATTCAACTGAAA+TGG - chr7_1:77915645-77915664 Msa1040530:CDS 30.0%
TTATTCAACTGAAATGGAAG+TGG - chr7_1:77915651-77915670 Msa1040530:CDS 30.0%
TTCTTGTTCCAACTATTTGA+TGG - chr7_1:77915678-77915697 Msa1040530:CDS 30.0%
TCTTGTTCCAACTATTTGAT+GGG - chr7_1:77915679-77915698 Msa1040530:CDS 30.0%
GTAATTTCCCATCAAATAGT+TGG + chr7_1:77915689-77915708 None:intergenic 30.0%
GATGTGTAATTCATCTGAAT+AGG + chr7_1:77915712-77915731 None:intergenic 30.0%
TGAGAAGAGTTTGGATTATT+TGG + chr7_1:77915748-77915767 None:intergenic 30.0%
ATAATCCAAACTCTTCTCAT+TGG - chr7_1:77915749-77915768 Msa1040530:CDS 30.0%
!! CAAAAGGTTTTAATCCTGTT+TGG + chr7_1:77915780-77915799 None:intergenic 30.0%
AATTCAGAGTTCATGTCAAA+AGG + chr7_1:77915796-77915815 None:intergenic 30.0%
! AAGAAATGAGGTATTAGTTG+GGG + chr7_1:77915851-77915870 None:intergenic 30.0%
! GAAGAAATGAGGTATTAGTT+GGG + chr7_1:77915852-77915871 None:intergenic 30.0%
!! AAAAGTATTGGGAAGAAATG+AGG + chr7_1:77915863-77915882 None:intergenic 30.0%
!! GGTTTGTAGCAAAAAGTATT+GGG + chr7_1:77915874-77915893 None:intergenic 30.0%
! TGGTTTGTAGCAAAAAGTAT+TGG + chr7_1:77915875-77915894 None:intergenic 30.0%
AAGAGACTGACATAAATGTT+TGG + chr7_1:77916325-77916344 None:intergenic 30.0%
ATGCACTTAGGAAATTACAA+TGG - chr7_1:77916450-77916469 Msa1040530:exon 30.0%
AGTGAAACTAGTTATGGATA+TGG + chr7_1:77916484-77916503 None:intergenic 30.0%
CTGATAAACAGAAAGATTGT+TGG + chr7_1:77914679-77914698 None:intergenic 30.0%
CATATTACTAAATACGGTCA+TGG - chr7_1:77914840-77914859 Msa1040530:three_prime_UTR 30.0%
ATATATATACCTGCTTGCTT+AGG + chr7_1:77914882-77914901 None:intergenic 30.0%
! TCAATGTATTTTATTGGCAC+AGG - chr7_1:77914994-77915013 Msa1040530:exon 30.0%
!! TTAGGTGGATTAATTACTTG+AGG - chr7_1:77915046-77915065 Msa1040530:CDS 30.0%
ATTGAACTTCATTCAGTACT+AGG - chr7_1:77915117-77915136 Msa1040530:CDS 30.0%
TTGAACTTCATTCAGTACTA+GGG - chr7_1:77915118-77915137 Msa1040530:CDS 30.0%
ATATCATATGCATGTCAACA+AGG + chr7_1:77915328-77915347 None:intergenic 30.0%
AAAGAAGAAACTGAGACAAA+AGG - chr7_1:77915435-77915454 Msa1040530:CDS 30.0%
AAGAAGAAACTGAGACAAAA+GGG - chr7_1:77915436-77915455 Msa1040530:CDS 30.0%
AAGTACTTTCTGATCTCATA+AGG + chr7_1:77915576-77915595 None:intergenic 30.0%
AGGACAATTGAAGATTGTTT+AGG + chr7_1:77915625-77915644 None:intergenic 30.0%
TTTCAGTTGAATAACCTTTG+AGG + chr7_1:77915645-77915664 None:intergenic 30.0%
CAAAGGTTATTCAACTGAAA+TGG - chr7_1:77915645-77915664 Msa1040530:CDS 30.0%
TTATTCAACTGAAATGGAAG+TGG - chr7_1:77915651-77915670 Msa1040530:CDS 30.0%
TTCTTGTTCCAACTATTTGA+TGG - chr7_1:77915678-77915697 Msa1040530:CDS 30.0%
TCTTGTTCCAACTATTTGAT+GGG - chr7_1:77915679-77915698 Msa1040530:CDS 30.0%
GTAATTTCCCATCAAATAGT+TGG + chr7_1:77915689-77915708 None:intergenic 30.0%
GATGTGTAATTCATCTGAAT+AGG + chr7_1:77915712-77915731 None:intergenic 30.0%
TGAGAAGAGTTTGGATTATT+TGG + chr7_1:77915748-77915767 None:intergenic 30.0%
ATAATCCAAACTCTTCTCAT+TGG - chr7_1:77915749-77915768 Msa1040530:CDS 30.0%
!! CAAAAGGTTTTAATCCTGTT+TGG + chr7_1:77915780-77915799 None:intergenic 30.0%
AATTCAGAGTTCATGTCAAA+AGG + chr7_1:77915796-77915815 None:intergenic 30.0%
! AAGAAATGAGGTATTAGTTG+GGG + chr7_1:77915851-77915870 None:intergenic 30.0%
! GAAGAAATGAGGTATTAGTT+GGG + chr7_1:77915852-77915871 None:intergenic 30.0%
!! AAAAGTATTGGGAAGAAATG+AGG + chr7_1:77915863-77915882 None:intergenic 30.0%
!! GGTTTGTAGCAAAAAGTATT+GGG + chr7_1:77915874-77915893 None:intergenic 30.0%
! TGGTTTGTAGCAAAAAGTAT+TGG + chr7_1:77915875-77915894 None:intergenic 30.0%
AAGAGACTGACATAAATGTT+TGG + chr7_1:77916325-77916344 None:intergenic 30.0%
ATGCACTTAGGAAATTACAA+TGG - chr7_1:77916450-77916469 Msa1040530:exon 30.0%
AGTGAAACTAGTTATGGATA+TGG + chr7_1:77916484-77916503 None:intergenic 30.0%
CAGAAAGATTGTTGGATTTG+TGG + chr7_1:77914671-77914690 None:intergenic 35.0%
! AAAAGTTTTTCATCCTCCTC+AGG + chr7_1:77914816-77914835 None:intergenic 35.0%
TTGAGGCCTGATTTAAAAAG+AGG - chr7_1:77915063-77915082 Msa1040530:CDS 35.0%
TTCATTCAGTACTAGGGAAT+AGG - chr7_1:77915124-77915143 Msa1040530:CDS 35.0%
! ACATTTTCTACCTCAGAAAG+TGG + chr7_1:77915484-77915503 None:intergenic 35.0%
! GGTAGAAAATGTTGATGAAG+AGG - chr7_1:77915492-77915511 Msa1040530:CDS 35.0%
!! ATATTTCTGCTGCTTTCTCT+TGG + chr7_1:77915534-77915553 None:intergenic 35.0%
ATAGGAAACAGCATCTGATT+TGG + chr7_1:77915599-77915618 None:intergenic 35.0%
TGAAGATTGTTTAGGCTCAT+AGG + chr7_1:77915617-77915636 None:intergenic 35.0%
CAATCTTCAATTGTCCTCAA+AGG - chr7_1:77915628-77915647 Msa1040530:CDS 35.0%
TTGAACCAATGAGAAGAGTT+TGG + chr7_1:77915757-77915776 None:intergenic 35.0%
! AGAAATGAGGTATTAGTTGG+GGG + chr7_1:77915850-77915869 None:intergenic 35.0%
! GGAAGAAATGAGGTATTAGT+TGG + chr7_1:77915853-77915872 None:intergenic 35.0%
GACATAGAAACATCTTGTGA+AGG + chr7_1:77915913-77915932 None:intergenic 35.0%
TTGAGAAGATTCTTGTTGCT+TGG + chr7_1:77916169-77916188 None:intergenic 35.0%
TCAGTCTCTTCATATTTGTG+AGG - chr7_1:77916335-77916354 Msa1040530:CDS 35.0%
GTGGGTAGAATTGCAAAATA+AGG - chr7_1:77916389-77916408 Msa1040530:CDS 35.0%
CAGAAAGATTGTTGGATTTG+TGG + chr7_1:77914671-77914690 None:intergenic 35.0%
! AAAAGTTTTTCATCCTCCTC+AGG + chr7_1:77914816-77914835 None:intergenic 35.0%
TTGAGGCCTGATTTAAAAAG+AGG - chr7_1:77915063-77915082 Msa1040530:CDS 35.0%
TTCATTCAGTACTAGGGAAT+AGG - chr7_1:77915124-77915143 Msa1040530:CDS 35.0%
! ACATTTTCTACCTCAGAAAG+TGG + chr7_1:77915484-77915503 None:intergenic 35.0%
! GGTAGAAAATGTTGATGAAG+AGG - chr7_1:77915492-77915511 Msa1040530:CDS 35.0%
!! ATATTTCTGCTGCTTTCTCT+TGG + chr7_1:77915534-77915553 None:intergenic 35.0%
ATAGGAAACAGCATCTGATT+TGG + chr7_1:77915599-77915618 None:intergenic 35.0%
TGAAGATTGTTTAGGCTCAT+AGG + chr7_1:77915617-77915636 None:intergenic 35.0%
CAATCTTCAATTGTCCTCAA+AGG - chr7_1:77915628-77915647 Msa1040530:CDS 35.0%
TTGAACCAATGAGAAGAGTT+TGG + chr7_1:77915757-77915776 None:intergenic 35.0%
! AGAAATGAGGTATTAGTTGG+GGG + chr7_1:77915850-77915869 None:intergenic 35.0%
! GGAAGAAATGAGGTATTAGT+TGG + chr7_1:77915853-77915872 None:intergenic 35.0%
GACATAGAAACATCTTGTGA+AGG + chr7_1:77915913-77915932 None:intergenic 35.0%
TTGAGAAGATTCTTGTTGCT+TGG + chr7_1:77916169-77916188 None:intergenic 35.0%
TCAGTCTCTTCATATTTGTG+AGG - chr7_1:77916335-77916354 Msa1040530:CDS 35.0%
GTGGGTAGAATTGCAAAATA+AGG - chr7_1:77916389-77916408 Msa1040530:CDS 35.0%
TACAAGCAGAAGCTTAGGAA+AGG - chr7_1:77914780-77914799 Msa1040530:three_prime_UTR 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG - chr7_1:77914787-77914806 Msa1040530:three_prime_UTR 40.0%
CTAAATACGGTCATGGATGT+TGG - chr7_1:77914847-77914866 Msa1040530:three_prime_UTR 40.0%
TTATTGGCACAGGTCTTCAA+AGG - chr7_1:77915004-77915023 Msa1040530:CDS 40.0%
! TGTGTGAGTGTTGTAAACTC+TGG + chr7_1:77915219-77915238 None:intergenic 40.0%
AAATTGCTGCACAATTGCCA+GGG - chr7_1:77915371-77915390 Msa1040530:CDS 40.0%
ATTTCATTATCAGTCCTCCC+TGG + chr7_1:77915391-77915410 None:intergenic 40.0%
AAAGTGGCTTATGAGTGACA+GGG + chr7_1:77915468-77915487 None:intergenic 40.0%
TCAACTGAAATGGAAGTGGA+AGG - chr7_1:77915655-77915674 Msa1040530:CDS 40.0%
!! TCTCATTGGTTCAACCAAAC+AGG - chr7_1:77915763-77915782 Msa1040530:CDS 40.0%
AAGAAGAAGAAGAAGCCAAG+TGG - chr7_1:77916022-77916041 Msa1040530:intron 40.0%
GTGAAGATACTCATTCCACT+TGG + chr7_1:77916040-77916059 None:intergenic 40.0%
ATAAAGCCTGCCACAGATTT+AGG - chr7_1:77916111-77916130 Msa1040530:CDS 40.0%
ATTTAGGCCCTGATGGTTTA+GGG - chr7_1:77916127-77916146 Msa1040530:CDS 40.0%
TTATGTCCCCTAAACCATCA+GGG + chr7_1:77916137-77916156 None:intergenic 40.0%
ATTATGTCCCCTAAACCATC+AGG + chr7_1:77916138-77916157 None:intergenic 40.0%
! GATTCTTGTTGCTTGGAATG+TGG + chr7_1:77916162-77916181 None:intergenic 40.0%
! ACACACAATCTGAAATCCCT+TGG + chr7_1:77916260-77916279 None:intergenic 40.0%
TCTGTTTCAGTGATGCACTT+AGG - chr7_1:77916438-77916457 Msa1040530:CDS 40.0%
TACAAGCAGAAGCTTAGGAA+AGG - chr7_1:77914780-77914799 Msa1040530:three_prime_UTR 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG - chr7_1:77914787-77914806 Msa1040530:three_prime_UTR 40.0%
CTAAATACGGTCATGGATGT+TGG - chr7_1:77914847-77914866 Msa1040530:three_prime_UTR 40.0%
TTATTGGCACAGGTCTTCAA+AGG - chr7_1:77915004-77915023 Msa1040530:CDS 40.0%
! TGTGTGAGTGTTGTAAACTC+TGG + chr7_1:77915219-77915238 None:intergenic 40.0%
AAATTGCTGCACAATTGCCA+GGG - chr7_1:77915371-77915390 Msa1040530:CDS 40.0%
ATTTCATTATCAGTCCTCCC+TGG + chr7_1:77915391-77915410 None:intergenic 40.0%
AAAGTGGCTTATGAGTGACA+GGG + chr7_1:77915468-77915487 None:intergenic 40.0%
TCAACTGAAATGGAAGTGGA+AGG - chr7_1:77915655-77915674 Msa1040530:CDS 40.0%
!! TCTCATTGGTTCAACCAAAC+AGG - chr7_1:77915763-77915782 Msa1040530:CDS 40.0%
AAGAAGAAGAAGAAGCCAAG+TGG - chr7_1:77916022-77916041 Msa1040530:intron 40.0%
GTGAAGATACTCATTCCACT+TGG + chr7_1:77916040-77916059 None:intergenic 40.0%
ATAAAGCCTGCCACAGATTT+AGG - chr7_1:77916111-77916130 Msa1040530:CDS 40.0%
ATTTAGGCCCTGATGGTTTA+GGG - chr7_1:77916127-77916146 Msa1040530:CDS 40.0%
TTATGTCCCCTAAACCATCA+GGG + chr7_1:77916137-77916156 None:intergenic 40.0%
ATTATGTCCCCTAAACCATC+AGG + chr7_1:77916138-77916157 None:intergenic 40.0%
! GATTCTTGTTGCTTGGAATG+TGG + chr7_1:77916162-77916181 None:intergenic 40.0%
! ACACACAATCTGAAATCCCT+TGG + chr7_1:77916260-77916279 None:intergenic 40.0%
TCTGTTTCAGTGATGCACTT+AGG - chr7_1:77916438-77916457 Msa1040530:CDS 40.0%
GTTGCTACAAGCAGAAGCTT+AGG - chr7_1:77914775-77914794 Msa1040530:three_prime_UTR 45.0%
AGTTCAGTTCCTAAGCAAGC+AGG - chr7_1:77914870-77914889 Msa1040530:three_prime_UTR 45.0%
! AAAGGTGTGGTAAGAGTTGC+AGG - chr7_1:77915022-77915041 Msa1040530:CDS 45.0%
CAAATTGCTGCACAATTGCC+AGG - chr7_1:77915370-77915389 Msa1040530:CDS 45.0%
GAAAGTGGCTTATGAGTGAC+AGG + chr7_1:77915469-77915488 None:intergenic 45.0%
! CACTCATAAGCCACTTTCTG+AGG - chr7_1:77915471-77915490 Msa1040530:CDS 45.0%
GAAGGAACATCAGCAAGTGA+TGG + chr7_1:77915895-77915914 None:intergenic 45.0%
GATTTAGGCCCTGATGGTTT+AGG - chr7_1:77916126-77916145 Msa1040530:CDS 45.0%
TTTAGGCCCTGATGGTTTAG+GGG - chr7_1:77916128-77916147 Msa1040530:CDS 45.0%
! AGCTTTTGGACAAGTGTAGC+AGG - chr7_1:77916203-77916222 Msa1040530:intron 45.0%
!! AATGACTTTAAGGGGCACCA+AGG - chr7_1:77916240-77916259 Msa1040530:intron 45.0%
!! ATGACTTTAAGGGGCACCAA+GGG - chr7_1:77916241-77916260 Msa1040530:intron 45.0%
GTTGCTACAAGCAGAAGCTT+AGG - chr7_1:77914775-77914794 Msa1040530:three_prime_UTR 45.0%
AGTTCAGTTCCTAAGCAAGC+AGG - chr7_1:77914870-77914889 Msa1040530:three_prime_UTR 45.0%
! AAAGGTGTGGTAAGAGTTGC+AGG - chr7_1:77915022-77915041 Msa1040530:CDS 45.0%
CAAATTGCTGCACAATTGCC+AGG - chr7_1:77915370-77915389 Msa1040530:CDS 45.0%
GAAAGTGGCTTATGAGTGAC+AGG + chr7_1:77915469-77915488 None:intergenic 45.0%
! CACTCATAAGCCACTTTCTG+AGG - chr7_1:77915471-77915490 Msa1040530:CDS 45.0%
GAAGGAACATCAGCAAGTGA+TGG + chr7_1:77915895-77915914 None:intergenic 45.0%
GATTTAGGCCCTGATGGTTT+AGG - chr7_1:77916126-77916145 Msa1040530:CDS 45.0%
TTTAGGCCCTGATGGTTTAG+GGG - chr7_1:77916128-77916147 Msa1040530:CDS 45.0%
! AGCTTTTGGACAAGTGTAGC+AGG - chr7_1:77916203-77916222 Msa1040530:intron 45.0%
!! AATGACTTTAAGGGGCACCA+AGG - chr7_1:77916240-77916259 Msa1040530:intron 45.0%
!! ATGACTTTAAGGGGCACCAA+GGG - chr7_1:77916241-77916260 Msa1040530:intron 45.0%
GAAAGGTCTATGGTCACCTG+AGG - chr7_1:77914797-77914816 Msa1040530:three_prime_UTR 50.0%
GTGGTAAGAGTTGCAGGCTT+AGG - chr7_1:77915028-77915047 Msa1040530:CDS 50.0%
GTAAGAGTTGCAGGCTTAGG+TGG - chr7_1:77915031-77915050 Msa1040530:CDS 50.0%
CAGAGTCTAACGCAAGTGGT+TGG + chr7_1:77915251-77915270 None:intergenic 50.0%
CAACCACTTGCGTTAGACTC+TGG - chr7_1:77915249-77915268 Msa1040530:CDS 50.0%
ACACCAGAGTCTAACGCAAG+TGG + chr7_1:77915255-77915274 None:intergenic 50.0%
ACCATCAGGGCCTAAATCTG+TGG + chr7_1:77916124-77916143 None:intergenic 50.0%
GAAAGGTCTATGGTCACCTG+AGG - chr7_1:77914797-77914816 Msa1040530:three_prime_UTR 50.0%
GTGGTAAGAGTTGCAGGCTT+AGG - chr7_1:77915028-77915047 Msa1040530:CDS 50.0%
GTAAGAGTTGCAGGCTTAGG+TGG - chr7_1:77915031-77915050 Msa1040530:CDS 50.0%
CAGAGTCTAACGCAAGTGGT+TGG + chr7_1:77915251-77915270 None:intergenic 50.0%
CAACCACTTGCGTTAGACTC+TGG - chr7_1:77915249-77915268 Msa1040530:CDS 50.0%
ACACCAGAGTCTAACGCAAG+TGG + chr7_1:77915255-77915274 None:intergenic 50.0%
ACCATCAGGGCCTAAATCTG+TGG + chr7_1:77916124-77916143 None:intergenic 50.0%
AGGTCTATGGTCACCTGAGG+AGG - chr7_1:77914800-77914819 Msa1040530:three_prime_UTR 55.0%
GGCACAGGTCTTCAAAGGTG+TGG - chr7_1:77915009-77915028 Msa1040530:CDS 55.0%
TTGCTGCACAATTGCCAGGG+AGG - chr7_1:77915374-77915393 Msa1040530:CDS 55.0%
TCAGGGCCTAAATCTGTGGC+AGG + chr7_1:77916120-77916139 None:intergenic 55.0%
GCCACAGATTTAGGCCCTGA+TGG - chr7_1:77916120-77916139 Msa1040530:CDS 55.0%
AGGTCTATGGTCACCTGAGG+AGG - chr7_1:77914800-77914819 Msa1040530:three_prime_UTR 55.0%
GGCACAGGTCTTCAAAGGTG+TGG - chr7_1:77915009-77915028 Msa1040530:CDS 55.0%
TTGCTGCACAATTGCCAGGG+AGG - chr7_1:77915374-77915393 Msa1040530:CDS 55.0%
TCAGGGCCTAAATCTGTGGC+AGG + chr7_1:77916120-77916139 None:intergenic 55.0%
GCCACAGATTTAGGCCCTGA+TGG - chr7_1:77916120-77916139 Msa1040530:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77914652 77916570 77914652 ID=Msa1040530;Name=Msa1040530
chr7_1 mRNA 77914652 77916570 77914652 ID=Msa1040530-mRNA-1;Parent=Msa1040530;Name=Msa1040530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=107|1|1|1|1|1|3|349|373
chr7_1 exon 77914652 77915859 77914652 ID=Msa1040530-mRNA-1:exon:20701;Parent=Msa1040530-mRNA-1
chr7_1 exon 77916077 77916206 77916077 ID=Msa1040530-mRNA-1:exon:20700;Parent=Msa1040530-mRNA-1
chr7_1 exon 77916331 77916570 77916331 ID=Msa1040530-mRNA-1:exon:20699;Parent=Msa1040530-mRNA-1
chr7_1 five_prime_UTR 77916464 77916570 77916464 ID=Msa1040530-mRNA-1:five_prime_utr;Parent=Msa1040530-mRNA-1
chr7_1 CDS 77916331 77916463 77916331 ID=Msa1040530-mRNA-1:cds;Parent=Msa1040530-mRNA-1
chr7_1 CDS 77916077 77916206 77916077 ID=Msa1040530-mRNA-1:cds;Parent=Msa1040530-mRNA-1
chr7_1 CDS 77915001 77915859 77915001 ID=Msa1040530-mRNA-1:cds;Parent=Msa1040530-mRNA-1
chr7_1 three_prime_UTR 77914652 77915000 77914652 ID=Msa1040530-mRNA-1:three_prime_utr;Parent=Msa1040530-mRNA-1
Gene Sequence

>Msa1040530

ATGGGAAGACACTCTTGTTGCTACAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCTGAGGAGGATGAAAAACTTTTGAATCATATTACTAAATACGGTCATGGATGTTGGAGTTCAGTTCCTAAGCAAGCAGGTCTTCAAAGGTGTGGTAAGAGTTGCAGGCTTAGGTGGATTAATTACTTGAGGCCTGATTTAAAAAGAGGTACATTTTCACAAGAAGAAGAAAATCTCATCATTGAACTTCATTCAGTACTAGGGAATAGATGGTCACAAATTGCTGCACAATTGCCAGGGAGGACTGATAATGAAATAAAGAATCTTTGGAATTCTTGCTTAAAGAAGAAACTGAGACAAAAGGGTATAGACCCTGTCACTCATAAGCCACTTTCTGAGGTAGAAAATGTTGATGAAGAGGAAGAAAAAACAAGAAGCCAAGAGAAAGCAGCAGAAATATCAGAATCAGATGAATTGAACCTTATGAGATCAGAAAGTACTTCCAAATCAGATGCTGTTTCCTATGAGCCTAAACAATCTTCAATTGTCCTCAAAGGTTATTCAACTGAAATGGAAGTGGAAGGTTCTTGTTCCAACTATTTGATGGGAAATTACCCTATTCAGATGAATTACACATCCACTGATAATATTCCAAATAATCCAAACTCTTCTCATTGGTTCAACCAAACAGGATTAAAACCTTTTGACATGAACTCTGAATTTACTTCAACTTCTAACATCATGTCAATTCTTCCCCCAACTAATACCTCATTTCTTCCCAATACTTTTTGCTACAAACCATCACTTGCTGATGTTCCTTCACAAGATGTTTCTATGTCTTCATCTTCTTTCCCTATGAAGAATAGTATCTTATCTTCTTGGGGAATTACAGATTGTGACACCTCTATTAAAGAGAATCAAACAGAAGAAGAAGAAGAAGAAGCCAAGTGGAATGAGTATCTTCACAATCCAATGTTAATGCTACAAAATCAAGCATCTGAATCTTTATGCAATGAAATAAAGCCTGCCACAGATTTAGGCCCTGATGGTTTAGGGGACATAATGCCACATTCCAAGCAACAAGAATCTTCTCAATCTTATAATATAGCAGCTTTTGGACAAGTGTAG
Protein sequence

>Msa1040530

MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVENVDEEEEKTRSQEKAAEISESDELNLMRSESTSKSDAVSYEPKQSSIVLKGYSTEMEVEGSCSNYLMGNYPIQMNYTSTDNIPNNPNSSHWFNQTGLKPFDMNSEFTSTSNIMSILPPTNTSFLPNTFCYKPSLADVPSQDVSMSSSSFPMKNSILSSWGITDCDTSIKENQTEEEEEEAKWNEYLHNPMLMLQNQASESLCNEIKPATDLGPDGLGDIMPHSKQQESSQSYNIAAFGQV*