Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040620 | RHN49092.1 | 96.134 | 388 | 9 | 2 | 1 | 388 | 51 | 432 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040620 | sp|Q9S6Z8|KCO5_ARATH | 68.000 | 325 | 98 | 1 | 66 | 384 | 80 | 404 | 7.11e-153 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040620 | A0A396H780 | 96.134 | 388 | 9 | 2 | 1 | 388 | 51 | 432 | 0.0 | 757 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1040620 | Msa1082910 | 0.800487 | 1.408205e-48 | -8.615850e-47 |
| Msa1040620 | Msa1160670 | 0.808173 | 3.527093e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040620 | MtrunA17_Chr7g0270761 | 96.134 | 388 | 9 | 2 | 1 | 388 | 51 | 432 | 0.0 | 757 |
| Msa1040620 | MtrunA17_Chr4g0051871 | 62.346 | 324 | 117 | 3 | 66 | 388 | 99 | 418 | 7.72e-144 | 417 |
| Msa1040620 | MtrunA17_Chr5g0443241 | 39.942 | 343 | 202 | 4 | 5 | 346 | 3 | 342 | 2.30e-69 | 224 |
| Msa1040620 | MtrunA17_Chr4g0076241 | 37.288 | 295 | 177 | 3 | 87 | 379 | 55 | 343 | 4.69e-65 | 213 |
| Msa1040620 | MtrunA17_Chr5g0446411 | 32.738 | 336 | 215 | 3 | 53 | 383 | 14 | 343 | 1.85e-58 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040620 | AT4G01840.1 | 68.000 | 325 | 98 | 1 | 66 | 384 | 80 | 404 | 7.23e-154 | 442 |
| Msa1040620 | AT4G18160.1 | 60.542 | 332 | 129 | 2 | 58 | 389 | 106 | 435 | 5.23e-133 | 390 |
| Msa1040620 | AT5G46370.1 | 57.975 | 326 | 130 | 2 | 72 | 392 | 115 | 438 | 1.44e-125 | 371 |
| Msa1040620 | AT1G02510.1 | 43.151 | 292 | 133 | 5 | 87 | 372 | 14 | 278 | 2.14e-67 | 216 |
| Msa1040620 | AT5G55630.2 | 38.214 | 280 | 169 | 3 | 100 | 379 | 73 | 348 | 3.14e-61 | 203 |
| Msa1040620 | AT5G55630.1 | 38.214 | 280 | 169 | 3 | 100 | 379 | 73 | 348 | 3.14e-61 | 203 |
| Msa1040620 | AT5G46360.1 | 50.920 | 163 | 77 | 1 | 226 | 388 | 100 | 259 | 6.55e-47 | 162 |
| Msa1040620 | AT5G46360.2 | 51.773 | 141 | 65 | 1 | 226 | 366 | 100 | 237 | 6.72e-40 | 144 |
Find 98 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGTCAAAATTGGAAATT+TGG | 0.159417 | 7_1:+78015041 | Msa1040620:CDS |
| CTGGGTTGATTCTATTTATT+TGG | 0.161088 | 7_1:+78012348 | Msa1040620:CDS |
| GTTGGTCATTGTTGGGTTTA+AGG | 0.175814 | 7_1:-78011841 | None:intergenic |
| GTGGTGGTGGTTGTTGTTGT+AGG | 0.206072 | 7_1:-78011676 | None:intergenic |
| CGCTAATAGCGTAGTTCTTC+GGG | 0.233925 | 7_1:-78015073 | None:intergenic |
| AGTTTAGTCATTGGTGTTAA+AGG | 0.245811 | 7_1:-78012058 | None:intergenic |
| ATCATGAAAATGTCTATTAA+TGG | 0.260600 | 7_1:+78014354 | Msa1040620:CDS |
| GGCTATGTCGTTGAAGGATT+TGG | 0.277283 | 7_1:-78011651 | None:intergenic |
| CCATTGACGAAAAGAAAATT+AGG | 0.287019 | 7_1:-78011571 | None:intergenic |
| ATGGAATTGGTTTGAGGTTT+GGG | 0.300185 | 7_1:-78011872 | None:intergenic |
| TGCAAATTTGTGATCAGTTC+AGG | 0.304949 | 7_1:+78013618 | Msa1040620:CDS |
| TCGCTAATAGCGTAGTTCTT+CGG | 0.319484 | 7_1:-78015074 | None:intergenic |
| CCATCATTCGACAAGGCATT+TGG | 0.327849 | 7_1:+78011891 | Msa1040620:CDS |
| TTGTCCTCTGACGCGTCTAA+TGG | 0.330115 | 7_1:-78014328 | None:intergenic |
| GGATCAAGTAGGATCAGTTT+TGG | 0.339808 | 7_1:+78015022 | Msa1040620:intron |
| CAAAAGGTAGGATGAGGATT+AGG | 0.342640 | 7_1:+78012242 | Msa1040620:CDS |
| GTGTATTGGTGTTGGGAGTT+TGG | 0.345263 | 7_1:+78012300 | Msa1040620:CDS |
| TAGGATGAGGATTAGGTTGA+AGG | 0.364579 | 7_1:+78012249 | Msa1040620:CDS |
| GACGATTGTTTGCCGCGATT+TGG | 0.369481 | 7_1:+78012428 | Msa1040620:CDS |
| AAAAGATAAATGATGAGATT+TGG | 0.371428 | 7_1:-78011526 | None:intergenic |
| AGTTGAGGTTGGTCATTGTT+GGG | 0.371622 | 7_1:-78011848 | None:intergenic |
| CACCGACAGAGAGGTATATA+AGG | 0.374305 | 7_1:-78011919 | None:intergenic |
| GATGGAATTGGTTTGAGGTT+TGG | 0.376622 | 7_1:-78011873 | None:intergenic |
| TTTCTACTTTGATGGTTGCT+AGG | 0.386044 | 7_1:+78012458 | Msa1040620:CDS |
| AAGTTGAGGTTGGTCATTGT+TGG | 0.391303 | 7_1:-78011849 | None:intergenic |
| ACCATGTGTACAATTGGTTA+TGG | 0.401239 | 7_1:+78012025 | Msa1040620:CDS |
| GCTGCTGATATCAACAATAC+TGG | 0.402274 | 7_1:+78012577 | Msa1040620:CDS |
| TTGACGGTTGATTAGAAGAA+AGG | 0.404260 | 7_1:-78011606 | None:intergenic |
| AAATAAAGAGCATCAACAAC+AGG | 0.414802 | 7_1:-78011992 | None:intergenic |
| TTCTACTTTGATGGTTGCTA+GGG | 0.415421 | 7_1:+78012459 | Msa1040620:CDS |
| CATTGTTGGGTTTAAGGTGT+GGG | 0.422331 | 7_1:-78011835 | None:intergenic |
| ATAGTTACCATGTGTACAAT+TGG | 0.422332 | 7_1:+78012019 | Msa1040620:CDS |
| TGTCCTCTGACGCGTCTAAT+GGG | 0.431314 | 7_1:-78014327 | None:intergenic |
| GAGGTTTGGGAAGTTGAGGT+TGG | 0.431644 | 7_1:-78011859 | None:intergenic |
| TGGTGGTGGTTGTTGTTGTA+GGG | 0.435035 | 7_1:-78011675 | None:intergenic |
| GATGATTGTGGTGGTGGTGG+TGG | 0.448889 | 7_1:-78011698 | None:intergenic |
| TTGAAGGTTGGTTTAGCACT+TGG | 0.451400 | 7_1:+78012265 | Msa1040620:CDS |
| CCAAATGCCTTGTCGAATGA+TGG | 0.453277 | 7_1:-78011891 | None:intergenic |
| TTGTTGTGGAGTGAAGTTGA+TGG | 0.456292 | 7_1:-78011732 | None:intergenic |
| GATGAGAAAATGGTTGTTGT+TGG | 0.463757 | 7_1:-78011760 | None:intergenic |
| AAGCTTGATCCCTCGAACTG+TGG | 0.465412 | 7_1:+78013641 | Msa1040620:CDS |
| CGAATGATGGAATTGGTTTG+AGG | 0.466080 | 7_1:-78011878 | None:intergenic |
| TGTTGTTGGTGGTGTTGTTG+TGG | 0.469045 | 7_1:-78011746 | None:intergenic |
| ATGAGGATTAGGTTGAAGGT+TGG | 0.469655 | 7_1:+78012253 | Msa1040620:CDS |
| ACATAGGAGATTGGCTAAGA+AGG | 0.469957 | 7_1:+78012519 | Msa1040620:CDS |
| TAGGGTGGCTATGTCGTTGA+AGG | 0.470550 | 7_1:-78011657 | None:intergenic |
| GTCTATTAATGGCATAAGTC+AGG | 0.472749 | 7_1:+78014365 | Msa1040620:CDS |
| GATAACATTACCTCATCTCT+TGG | 0.475408 | 7_1:+78013667 | Msa1040620:CDS |
| CTTCAAATGGGTGCAAGGGA+AGG | 0.478060 | 7_1:+78012187 | Msa1040620:CDS |
| TCTGTTACAACGGTTGGTTA+TGG | 0.489001 | 7_1:+78012379 | Msa1040620:CDS |
| CAAGCAAAGAGTTTAGTCAT+TGG | 0.489008 | 7_1:-78012067 | None:intergenic |
| TGGTGGTTGTTGTTGTAGGG+TGG | 0.501302 | 7_1:-78011672 | None:intergenic |
| GTTATGTCTGTTACAACGGT+TGG | 0.504121 | 7_1:+78012373 | Msa1040620:CDS |
| CCTTGCACCCATTTGAAGCC+CGG | 0.506578 | 7_1:-78012182 | None:intergenic |
| ATCTCAGATGATTGTGGTGG+TGG | 0.509487 | 7_1:-78011704 | None:intergenic |
| GGCTGTTATGTCTGTTACAA+CGG | 0.510559 | 7_1:+78012369 | Msa1040620:CDS |
| TGATAGAAGACATAGGAGAT+TGG | 0.511668 | 7_1:+78012510 | Msa1040620:CDS |
| AGCTTGATCCCTCGAACTGT+GGG | 0.513842 | 7_1:+78013642 | Msa1040620:CDS |
| TATATAGTCGATGTTGCAAA+AGG | 0.514923 | 7_1:+78012226 | Msa1040620:CDS |
| TTCAAATGGGTGCAAGGGAA+GGG | 0.516600 | 7_1:+78012188 | Msa1040620:CDS |
| GAGAAATTACTATTGAAGAC+TGG | 0.520740 | 7_1:+78012551 | Msa1040620:CDS |
| AACATTACCTCATCTCTTGG+AGG | 0.522630 | 7_1:+78013670 | Msa1040620:CDS |
| TGACGGTTGATTAGAAGAAA+GGG | 0.523925 | 7_1:-78011605 | None:intergenic |
| GAAGGATTTGGAAGAAGTGA+AGG | 0.524120 | 7_1:-78011639 | None:intergenic |
| TGTTATCTTCCCACAGTTCG+AGG | 0.524286 | 7_1:-78013651 | None:intergenic |
| TCATTGTTGGGTTTAAGGTG+TGG | 0.524950 | 7_1:-78011836 | None:intergenic |
| CCGGGCTTCAAATGGGTGCA+AGG | 0.525963 | 7_1:+78012182 | Msa1040620:CDS |
| GAGAAAATGGTTGTTGTTGG+TGG | 0.528520 | 7_1:-78011757 | None:intergenic |
| TCAGATGATTGTGGTGGTGG+TGG | 0.528689 | 7_1:-78011701 | None:intergenic |
| GCCTTGTCGAATGATGGAAT+TGG | 0.531639 | 7_1:-78011885 | None:intergenic |
| GTTTGAGGTTTGGGAAGTTG+AGG | 0.533112 | 7_1:-78011863 | None:intergenic |
| TGGTTTAGCACTTGGTGTGG+TGG | 0.548065 | 7_1:+78012273 | Msa1040620:CDS |
| AGCGTAGTTCTTCGGGTCTG+TGG | 0.561359 | 7_1:-78015066 | None:intergenic |
| CTCCTTATATACCTCTCTGT+CGG | 0.565796 | 7_1:+78011917 | Msa1040620:CDS |
| GTTATCTTCCCACAGTTCGA+GGG | 0.572545 | 7_1:-78013650 | None:intergenic |
| TTCATAGATATACTTCTAAG+TGG | 0.573910 | 7_1:+78012115 | Msa1040620:CDS |
| ATCGCGGCAAACAATCGTCC+CGG | 0.582359 | 7_1:-78012424 | None:intergenic |
| AAGGATTTGGAAGAAGTGAA+GGG | 0.586932 | 7_1:-78011638 | None:intergenic |
| ATGTTGCAAAAGGTAGGATG+AGG | 0.593935 | 7_1:+78012236 | Msa1040620:CDS |
| TACCTCATCTCTTGGAGGGT+AGG | 0.595849 | 7_1:+78013675 | Msa1040620:CDS |
| CGGGCTTCAAATGGGTGCAA+GGG | 0.597451 | 7_1:+78012183 | Msa1040620:CDS |
| TCCATAACCAATTGTACACA+TGG | 0.601726 | 7_1:-78012026 | None:intergenic |
| CTAGAATTGATAGAAGACAT+AGG | 0.603969 | 7_1:+78012503 | Msa1040620:CDS |
| TGTGGGAGAATGAACATGGC+TGG | 0.615636 | 7_1:-78011818 | None:intergenic |
| GATTGTATCTCAGATGATTG+TGG | 0.626746 | 7_1:-78011710 | None:intergenic |
| GGTTGGTTTAGCACTTGGTG+TGG | 0.630070 | 7_1:+78012270 | Msa1040620:CDS |
| TAGTCGATGTTGCAAAAGGT+AGG | 0.630320 | 7_1:+78012230 | Msa1040620:CDS |
| ACATTACCTCATCTCTTGGA+GGG | 0.633541 | 7_1:+78013671 | Msa1040620:CDS |
| GGTGCATTGCAGGATCAAGT+AGG | 0.634578 | 7_1:+78015011 | Msa1040620:intron |
| TTACCCATTAGACGCGTCAG+AGG | 0.646681 | 7_1:+78014324 | Msa1040620:CDS |
| GACCTACCCTCCAAGAGATG+AGG | 0.650185 | 7_1:-78013677 | None:intergenic |
| AATAAAGAGCATCAACAACA+GGG | 0.664300 | 7_1:-78011991 | None:intergenic |
| ACCAATTCCATCATTCGACA+AGG | 0.666542 | 7_1:+78011884 | Msa1040620:CDS |
| ACGAAAAGAAAATTAGGACA+TGG | 0.675064 | 7_1:-78011565 | None:intergenic |
| TGTATCTCAGATGATTGTGG+TGG | 0.681331 | 7_1:-78011707 | None:intergenic |
| AGAAAACAACAACCAAATCG+CGG | 0.707401 | 7_1:-78012440 | None:intergenic |
| AAGGTGTGGGAGAATGAACA+TGG | 0.713654 | 7_1:-78011822 | None:intergenic |
| ATATTATGACACCGACAGAG+AGG | 0.738363 | 7_1:-78011928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTCAATTATTTTATCATA+TGG | + | chr7_1:78013456-78013475 | Msa1040620:intron | 10.0% |
| !!! | TATCTACTTTTTTTTTTTAA+AGG | - | chr7_1:78014243-78014262 | None:intergenic | 10.0% |
| !! | TAATTAGAATATCATATTCA+TGG | - | chr7_1:78013117-78013136 | None:intergenic | 15.0% |
| !! | TAATTAACTAATGATCTTAA+GGG | - | chr7_1:78013150-78013169 | None:intergenic | 15.0% |
| !!! | TACTTTTTTTTTTTAAAGGA+GGG | - | chr7_1:78014239-78014258 | None:intergenic | 15.0% |
| !! | AATTTATCAAAAGTTCATTA+GGG | - | chr7_1:78014921-78014940 | None:intergenic | 15.0% |
| !! | ACATTTATAAACTTATTTCA+TGG | - | chr7_1:78014967-78014986 | None:intergenic | 15.0% |
| !! | AAAAGATAAATGATGAGATT+TGG | - | chr7_1:78011529-78011548 | None:intergenic | 20.0% |
| !!! | TTTACCCTCTTTTTAATTTT+AGG | + | chr7_1:78012624-78012643 | Msa1040620:intron | 20.0% |
| !! | TTGACCTAAAATTAAAAAGA+GGG | - | chr7_1:78012631-78012650 | None:intergenic | 20.0% |
| !! | TTTGACCTAAAATTAAAAAG+AGG | - | chr7_1:78012632-78012651 | None:intergenic | 20.0% |
| !!! | CATAATTTTTCATAATAGCA+GGG | - | chr7_1:78012834-78012853 | None:intergenic | 20.0% |
| !! | AATTAACTAATGATCTTAAG+GGG | - | chr7_1:78013149-78013168 | None:intergenic | 20.0% |
| !! | GTAATTAACTAATGATCTTA+AGG | - | chr7_1:78013151-78013170 | None:intergenic | 20.0% |
| !!! | ATATGGTGTAGTTATTTTAA+AGG | + | chr7_1:78013473-78013492 | Msa1040620:intron | 20.0% |
| !! | AGAAACTATGATGATTATTA+TGG | + | chr7_1:78014026-78014045 | Msa1040620:intron | 20.0% |
| !!! | CTACTTTTTTTTTTTAAAGG+AGG | - | chr7_1:78014240-78014259 | None:intergenic | 20.0% |
| !! | ATCATGAAAATGTCTATTAA+TGG | + | chr7_1:78014354-78014373 | Msa1040620:CDS | 20.0% |
| !! | TATAGATTTATGTTTATGAG+AGG | + | chr7_1:78014888-78014907 | Msa1040620:intron | 20.0% |
| !! | GAATTTATCAAAAGTTCATT+AGG | - | chr7_1:78014922-78014941 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTGATGAGAAAA+TGG | - | chr7_1:78011773-78011792 | None:intergenic | 25.0% |
| ! | TTCAACACAAAAAATTTCTC+TGG | + | chr7_1:78011956-78011975 | Msa1040620:CDS | 25.0% |
| ! | TTCATAGATATACTTCTAAG+TGG | + | chr7_1:78012115-78012134 | Msa1040620:CDS | 25.0% |
| !!! | TGGACTTGTTAATTTTGTTT+TGG | + | chr7_1:78012135-78012154 | Msa1040620:CDS | 25.0% |
| !!! | TCAACAATACTGGTTTTATT+AGG | + | chr7_1:78012587-78012606 | Msa1040620:CDS | 25.0% |
| !! | AACATTTTGTTGCAATATCA+AGG | + | chr7_1:78012751-78012770 | Msa1040620:intron | 25.0% |
| !! | CCATAATTTTTCATAATAGC+AGG | - | chr7_1:78012835-78012854 | None:intergenic | 25.0% |
| ! | CCTGCTATTATGAAAAATTA+TGG | + | chr7_1:78012832-78012851 | Msa1040620:intron | 25.0% |
| ! | GCTTATGACTAAGAATATAT+TGG | - | chr7_1:78013240-78013259 | None:intergenic | 25.0% |
| !! | TTAATTCACATTAGCTTAGA+TGG | + | chr7_1:78013279-78013298 | Msa1040620:intron | 25.0% |
| !! | TAATTCACATTAGCTTAGAT+GGG | + | chr7_1:78013280-78013299 | Msa1040620:intron | 25.0% |
| ! | CAAAATGTACATGTATTGTT+GGG | + | chr7_1:78013779-78013798 | Msa1040620:intron | 25.0% |
| ! | TGTACAGAAATTAGAATTGT+TGG | + | chr7_1:78013812-78013831 | Msa1040620:intron | 25.0% |
| !! | ATTTTATAATTCGCAACTAC+CGG | + | chr7_1:78013917-78013936 | Msa1040620:intron | 25.0% |
| !! | AAAATGATTTGTGACTTAAC+CGG | - | chr7_1:78013939-78013958 | None:intergenic | 25.0% |
| !! | CAAATCATTTTCTTATCCTT+TGG | + | chr7_1:78013948-78013967 | Msa1040620:intron | 25.0% |
| !! | GTATCTAACTCTTTCTTTTA+GGG | - | chr7_1:78014268-78014287 | None:intergenic | 25.0% |
| !! | TGTATCTAACTCTTTCTTTT+AGG | - | chr7_1:78014269-78014288 | None:intergenic | 25.0% |
| ! | TATTTCATGGCAATTTAACA+TGG | - | chr7_1:78014954-78014973 | None:intergenic | 25.0% |
| ! | TAAATGTATATACATGTTGC+TGG | + | chr7_1:78014980-78014999 | Msa1040620:intron | 25.0% |
| ACGAAAAGAAAATTAGGACA+TGG | - | chr7_1:78011568-78011587 | None:intergenic | 30.0% | |
| CCATTGACGAAAAGAAAATT+AGG | - | chr7_1:78011574-78011593 | None:intergenic | 30.0% | |
| ! | CCTAATTTTCTTTTCGTCAA+TGG | + | chr7_1:78011571-78011590 | Msa1040620:exon | 30.0% |
| ! | TGAAGGGTTGTAAATTTTGA+CGG | - | chr7_1:78011625-78011644 | None:intergenic | 30.0% |
| !! | AATAAAGAGCATCAACAACA+GGG | - | chr7_1:78011994-78012013 | None:intergenic | 30.0% |
| !! | AAATAAAGAGCATCAACAAC+AGG | - | chr7_1:78011995-78012014 | None:intergenic | 30.0% |
| ATAGTTACCATGTGTACAAT+TGG | + | chr7_1:78012019-78012038 | Msa1040620:CDS | 30.0% | |
| !! | AGTTTAGTCATTGGTGTTAA+AGG | - | chr7_1:78012061-78012080 | None:intergenic | 30.0% |
| !!! | TGCTTGTGTTTTTGTTTTAG+TGG | + | chr7_1:78012084-78012103 | Msa1040620:CDS | 30.0% |
| !!! | GCTTGTGTTTTTGTTTTAGT+GGG | + | chr7_1:78012085-78012104 | Msa1040620:CDS | 30.0% |
| !!! | GTTTTTGTTTTAGTGGGTTT+TGG | + | chr7_1:78012091-78012110 | Msa1040620:CDS | 30.0% |
| !! | CAAGAGAATACGATTTTAAC+CGG | + | chr7_1:78012163-78012182 | Msa1040620:CDS | 30.0% |
| !! | AAGAGAATACGATTTTAACC+GGG | + | chr7_1:78012164-78012183 | Msa1040620:CDS | 30.0% |
| TATATAGTCGATGTTGCAAA+AGG | + | chr7_1:78012226-78012245 | Msa1040620:CDS | 30.0% | |
| !!! | TTTGGTTTTGTGTTTTGTTG+AGG | + | chr7_1:78012318-78012337 | Msa1040620:CDS | 30.0% |
| !!! | TTGGTTTTGTGTTTTGTTGA+GGG | + | chr7_1:78012319-78012338 | Msa1040620:CDS | 30.0% |
| !! | CTGGGTTGATTCTATTTATT+TGG | + | chr7_1:78012348-78012367 | Msa1040620:CDS | 30.0% |
| !!! | GTTGTTGTTTTCTACTTTGA+TGG | + | chr7_1:78012450-78012469 | Msa1040620:CDS | 30.0% |
| CTAGAATTGATAGAAGACAT+AGG | + | chr7_1:78012503-78012522 | Msa1040620:CDS | 30.0% | |
| GAGAAATTACTATTGAAGAC+TGG | + | chr7_1:78012551-78012570 | Msa1040620:CDS | 30.0% | |
| !! | AAATCCGTAGTTCTAAATTG+CGG | + | chr7_1:78012649-78012668 | Msa1040620:intron | 30.0% |
| ! | TATACCGCAATTTAGAACTA+CGG | - | chr7_1:78012656-78012675 | None:intergenic | 30.0% |
| GCGGTATATAATTGTAATTG+TGG | + | chr7_1:78012668-78012687 | Msa1040620:intron | 30.0% | |
| TAATTGTGGCTGTAATGTAA+AGG | + | chr7_1:78012682-78012701 | Msa1040620:intron | 30.0% | |
| ACATGAGTGGTTTATAATTG+TGG | + | chr7_1:78012779-78012798 | Msa1040620:intron | 30.0% | |
| GAATGTGAAATTACTACTTC+TGG | + | chr7_1:78013021-78013040 | Msa1040620:intron | 30.0% | |
| ! | ACTTCTGGTAAAGTGTTAAT+TGG | + | chr7_1:78013036-78013055 | Msa1040620:intron | 30.0% |
| ! | CTTCTGGTAAAGTGTTAATT+GGG | + | chr7_1:78013037-78013056 | Msa1040620:intron | 30.0% |
| ! | TTCTGGTAAAGTGTTAATTG+GGG | + | chr7_1:78013038-78013057 | Msa1040620:intron | 30.0% |
| ACCAAACAAGAATACAACAT+TGG | + | chr7_1:78013088-78013107 | Msa1040620:intron | 30.0% | |
| TCCAATGTTGTATTCTTGTT+TGG | - | chr7_1:78013092-78013111 | None:intergenic | 30.0% | |
| !! | TGATTGATAATGTCACTTTC+TGG | + | chr7_1:78013358-78013377 | Msa1040620:intron | 30.0% |
| !! | GATTGATAATGTCACTTTCT+GGG | + | chr7_1:78013359-78013378 | Msa1040620:intron | 30.0% |
| !! | ATTTTCAAGCTGAAAGAGAT+GGG | + | chr7_1:78013572-78013591 | Msa1040620:CDS | 30.0% |
| GCAAAATGTACATGTATTGT+TGG | + | chr7_1:78013778-78013797 | Msa1040620:intron | 30.0% | |
| GAAAGATGAAATAATGTTCC+TGG | - | chr7_1:78013891-78013910 | None:intergenic | 30.0% | |
| TTATAAAACCAAGTCACCAA+AGG | - | chr7_1:78013967-78013986 | None:intergenic | 30.0% | |
| ACGTTTGCCTATGTTATTAT+TGG | + | chr7_1:78014049-78014068 | Msa1040620:intron | 30.0% | |
| AGGGTGTATCTACTTATAAT+TGG | - | chr7_1:78014220-78014239 | None:intergenic | 30.0% | |
| AATATTCCGTTACTGTTAAG+CGG | - | chr7_1:78014306-78014325 | None:intergenic | 30.0% | |
| TATGAAATATCAGTCAAGCA+TGG | + | chr7_1:78014448-78014467 | Msa1040620:intron | 30.0% | |
| ATGAAATATCAGTCAAGCAT+GGG | + | chr7_1:78014449-78014468 | Msa1040620:intron | 30.0% | |
| AGAAGTTTGGATGATTATGA+TGG | - | chr7_1:78014652-78014671 | None:intergenic | 30.0% | |
| ! | ATCATGATTTGGAAGAAGTT+TGG | - | chr7_1:78014665-78014684 | None:intergenic | 30.0% |
| AAAGGAAGGTAAACTATCTA+TGG | - | chr7_1:78014843-78014862 | None:intergenic | 30.0% | |
| ATAGATAGTTTACCTTCCTT+TGG | + | chr7_1:78014842-78014861 | Msa1040620:intron | 30.0% | |
| TAGATAGTTTACCTTCCTTT+GGG | + | chr7_1:78014843-78014862 | Msa1040620:intron | 30.0% | |
| TTGGGTCAAAATTGGAAATT+TGG | + | chr7_1:78015041-78015060 | Msa1040620:CDS | 30.0% | |
| TGACGGTTGATTAGAAGAAA+GGG | - | chr7_1:78011608-78011627 | None:intergenic | 35.0% | |
| TTGACGGTTGATTAGAAGAA+AGG | - | chr7_1:78011609-78011628 | None:intergenic | 35.0% | |
| AAGGATTTGGAAGAAGTGAA+GGG | - | chr7_1:78011641-78011660 | None:intergenic | 35.0% | |
| GATTGTATCTCAGATGATTG+TGG | - | chr7_1:78011713-78011732 | None:intergenic | 35.0% | |
| GATGAGAAAATGGTTGTTGT+TGG | - | chr7_1:78011763-78011782 | None:intergenic | 35.0% | |
| !! | ATGGAATTGGTTTGAGGTTT+GGG | - | chr7_1:78011875-78011894 | None:intergenic | 35.0% |
| ACCATGTGTACAATTGGTTA+TGG | + | chr7_1:78012025-78012044 | Msa1040620:CDS | 35.0% | |
| TCCATAACCAATTGTACACA+TGG | - | chr7_1:78012029-78012048 | None:intergenic | 35.0% | |
| CAAGCAAAGAGTTTAGTCAT+TGG | - | chr7_1:78012070-78012089 | None:intergenic | 35.0% | |
| !! | ATTTTAACCGGGCTTCAAAT+GGG | + | chr7_1:78012175-78012194 | Msa1040620:CDS | 35.0% |
| !!! | TGGTTTTGTGTATTGGTGTT+GGG | + | chr7_1:78012293-78012312 | Msa1040620:CDS | 35.0% |
| ! | TTTTGTTGAGGGTTTAGACT+GGG | + | chr7_1:78012330-78012349 | Msa1040620:CDS | 35.0% |
| !!! | TAGAGCTTTTAAGACTCTTC+CGG | + | chr7_1:78012405-78012424 | Msa1040620:CDS | 35.0% |
| AGAAAACAACAACCAAATCG+CGG | - | chr7_1:78012443-78012462 | None:intergenic | 35.0% | |
| ! | TTTCTACTTTGATGGTTGCT+AGG | + | chr7_1:78012458-78012477 | Msa1040620:CDS | 35.0% |
| ! | TTCTACTTTGATGGTTGCTA+GGG | + | chr7_1:78012459-78012478 | Msa1040620:CDS | 35.0% |
| ! | TGCTAGGGCTTTTCTTTATT+TGG | + | chr7_1:78012474-78012493 | Msa1040620:CDS | 35.0% |
| TGATAGAAGACATAGGAGAT+TGG | + | chr7_1:78012510-78012529 | Msa1040620:CDS | 35.0% | |
| AAAGAGGGTAAAGAACTGTT+AGG | - | chr7_1:78012616-78012635 | None:intergenic | 35.0% | |
| TTGCAACAACATTGCAATTG+CGG | + | chr7_1:78012717-78012736 | Msa1040620:intron | 35.0% | |
| TATCAAGGTTTACACATGAG+TGG | + | chr7_1:78012766-78012785 | Msa1040620:intron | 35.0% | |
| CCACAATTATGGTTACATTG+CGG | + | chr7_1:78012874-78012893 | Msa1040620:intron | 35.0% | |
| !! | AAGACTAGTCTTATTGGTTC+TGG | - | chr7_1:78012996-78013015 | None:intergenic | 35.0% |
| !! | CTCACAAAGACTAGTCTTAT+TGG | - | chr7_1:78013002-78013021 | None:intergenic | 35.0% |
| ! | TCTGGTAAAGTGTTAATTGG+GGG | + | chr7_1:78013039-78013058 | Msa1040620:intron | 35.0% |
| CAAGTTGCTATAATCATCTG+TGG | + | chr7_1:78013170-78013189 | Msa1040620:intron | 35.0% | |
| ATGCATCATAGTACACAAGT+AGG | + | chr7_1:78013396-78013415 | Msa1040620:intron | 35.0% | |
| TGCATCATAGTACACAAGTA+GGG | + | chr7_1:78013397-78013416 | Msa1040620:intron | 35.0% | |
| GAAAACAAAGTGAAGAAGGA+TGG | - | chr7_1:78013534-78013553 | None:intergenic | 35.0% | |
| TGCTGAAAACAAAGTGAAGA+AGG | - | chr7_1:78013538-78013557 | None:intergenic | 35.0% | |
| !! | GATTTTCAAGCTGAAAGAGA+TGG | + | chr7_1:78013571-78013590 | Msa1040620:CDS | 35.0% |
| TGCAAATTTGTGATCAGTTC+AGG | + | chr7_1:78013618-78013637 | Msa1040620:CDS | 35.0% | |
| GATAACATTACCTCATCTCT+TGG | + | chr7_1:78013667-78013686 | Msa1040620:CDS | 35.0% | |
| !!! | TGTTTTAGTGCAAAAGCTAG+TGG | + | chr7_1:78013726-78013745 | Msa1040620:intron | 35.0% |
| AGAATGAAGTCACTAGAAGA+TGG | + | chr7_1:78013839-78013858 | Msa1040620:intron | 35.0% | |
| TCACTAGAAGATGGATAGAA+AGG | + | chr7_1:78013848-78013867 | Msa1040620:intron | 35.0% | |
| CACTAGAAGATGGATAGAAA+GGG | + | chr7_1:78013849-78013868 | Msa1040620:intron | 35.0% | |
| GTTCCTGGTATATTCATGAT+AGG | - | chr7_1:78013876-78013895 | None:intergenic | 35.0% | |
| ! | TTTCTTATCCTTTGGTGACT+TGG | + | chr7_1:78013956-78013975 | Msa1040620:intron | 35.0% |
| TGCCTATGTTATTATTGGCA+AGG | + | chr7_1:78014054-78014073 | Msa1040620:intron | 35.0% | |
| GTCCTTGCCAATAATAACAT+AGG | - | chr7_1:78014059-78014078 | None:intergenic | 35.0% | |
| TCTTTCTCTTCATGACTTTG+TGG | - | chr7_1:78014081-78014100 | None:intergenic | 35.0% | |
| AATATCCCGCTTAACAGTAA+CGG | + | chr7_1:78014297-78014316 | Msa1040620:intron | 35.0% | |
| ATATTCCGTTACTGTTAAGC+GGG | - | chr7_1:78014305-78014324 | None:intergenic | 35.0% | |
| GTCTATTAATGGCATAAGTC+AGG | + | chr7_1:78014365-78014384 | Msa1040620:CDS | 35.0% | |
| TTATAGAACGTCAAGTACGA+CGG | + | chr7_1:78014415-78014434 | Msa1040620:intron | 35.0% | |
| GAAAATGAAGTGGGAAATGA+GGG | - | chr7_1:78014567-78014586 | None:intergenic | 35.0% | |
| AGAAAATGAAGTGGGAAATG+AGG | - | chr7_1:78014568-78014587 | None:intergenic | 35.0% | |
| CTAGAGAGAGAAAATGAAGT+GGG | - | chr7_1:78014576-78014595 | None:intergenic | 35.0% | |
| ! | CATTTTCTCTCTCTAGGTTT+TGG | + | chr7_1:78014580-78014599 | Msa1040620:intron | 35.0% |
| ! | TTGGATGATTATGATGGAGA+GGG | - | chr7_1:78014646-78014665 | None:intergenic | 35.0% |
| ! | TTTGGATGATTATGATGGAG+AGG | - | chr7_1:78014647-78014666 | None:intergenic | 35.0% |
| TTCCAAATCATGATCAAGCA+TGG | + | chr7_1:78014671-78014690 | Msa1040620:intron | 35.0% | |
| ATCCATGCTTGATCATGATT+TGG | - | chr7_1:78014676-78014695 | None:intergenic | 35.0% | |
| ! | TCATGATCAAGCATGGATTA+AGG | + | chr7_1:78014678-78014697 | Msa1040620:intron | 35.0% |
| GAAGAGATTAAAGCAGGATT+TGG | + | chr7_1:78014729-78014748 | Msa1040620:intron | 35.0% | |
| GCTAAAGATCAAGAATGAAG+AGG | + | chr7_1:78014760-78014779 | Msa1040620:intron | 35.0% | |
| AAATTACTCAACCCAAAGGA+AGG | - | chr7_1:78014857-78014876 | None:intergenic | 35.0% | |
| CATGAAATTACTCAACCCAA+AGG | - | chr7_1:78014861-78014880 | None:intergenic | 35.0% | |
| TACATGTTGCTGGATGAATA+TGG | + | chr7_1:78014990-78015009 | Msa1040620:intron | 35.0% | |
| ! | GATCAAGTAGGATCAGTTTT+GGG | + | chr7_1:78015023-78015042 | Msa1040620:CDS | 35.0% |
| !!! | GATCAGTTTTGGGTCAAAAT+TGG | + | chr7_1:78015033-78015052 | Msa1040620:CDS | 35.0% |
| GAAGGATTTGGAAGAAGTGA+AGG | - | chr7_1:78011642-78011661 | None:intergenic | 40.0% | |
| TGTATCTCAGATGATTGTGG+TGG | - | chr7_1:78011710-78011729 | None:intergenic | 40.0% | |
| TTGTTGTGGAGTGAAGTTGA+TGG | - | chr7_1:78011735-78011754 | None:intergenic | 40.0% | |
| ! | GAGAAAATGGTTGTTGTTGG+TGG | - | chr7_1:78011760-78011779 | None:intergenic | 40.0% |
| ! | CATTGTTGGGTTTAAGGTGT+GGG | - | chr7_1:78011838-78011857 | None:intergenic | 40.0% |
| ! | TCATTGTTGGGTTTAAGGTG+TGG | - | chr7_1:78011839-78011858 | None:intergenic | 40.0% |
| GTTGGTCATTGTTGGGTTTA+AGG | - | chr7_1:78011844-78011863 | None:intergenic | 40.0% | |
| ! | AGTTGAGGTTGGTCATTGTT+GGG | - | chr7_1:78011851-78011870 | None:intergenic | 40.0% |
| ! | AAGTTGAGGTTGGTCATTGT+TGG | - | chr7_1:78011852-78011871 | None:intergenic | 40.0% |
| !! | GATGGAATTGGTTTGAGGTT+TGG | - | chr7_1:78011876-78011895 | None:intergenic | 40.0% |
| !! | CGAATGATGGAATTGGTTTG+AGG | - | chr7_1:78011881-78011900 | None:intergenic | 40.0% |
| ACCAATTCCATCATTCGACA+AGG | + | chr7_1:78011884-78011903 | Msa1040620:CDS | 40.0% | |
| CTCCTTATATACCTCTCTGT+CGG | + | chr7_1:78011917-78011936 | Msa1040620:CDS | 40.0% | |
| ATATTATGACACCGACAGAG+AGG | - | chr7_1:78011931-78011950 | None:intergenic | 40.0% | |
| !! | GATTTTAACCGGGCTTCAAA+TGG | + | chr7_1:78012174-78012193 | Msa1040620:CDS | 40.0% |
| TAGTCGATGTTGCAAAAGGT+AGG | + | chr7_1:78012230-78012249 | Msa1040620:CDS | 40.0% | |
| ATGTTGCAAAAGGTAGGATG+AGG | + | chr7_1:78012236-78012255 | Msa1040620:CDS | 40.0% | |
| CAAAAGGTAGGATGAGGATT+AGG | + | chr7_1:78012242-78012261 | Msa1040620:CDS | 40.0% | |
| !! | TAGGATGAGGATTAGGTTGA+AGG | + | chr7_1:78012249-78012268 | Msa1040620:CDS | 40.0% |
| !! | ATGAGGATTAGGTTGAAGGT+TGG | + | chr7_1:78012253-78012272 | Msa1040620:CDS | 40.0% |
| !! | TTGAAGGTTGGTTTAGCACT+TGG | + | chr7_1:78012265-78012284 | Msa1040620:CDS | 40.0% |
| !!! | GTGGTTTTGTGTATTGGTGT+TGG | + | chr7_1:78012292-78012311 | Msa1040620:CDS | 40.0% |
| !! | GTTTTGTTGAGGGTTTAGAC+TGG | + | chr7_1:78012329-78012348 | Msa1040620:CDS | 40.0% |
| GGCTGTTATGTCTGTTACAA+CGG | + | chr7_1:78012369-78012388 | Msa1040620:CDS | 40.0% | |
| GTTATGTCTGTTACAACGGT+TGG | + | chr7_1:78012373-78012392 | Msa1040620:CDS | 40.0% | |
| ! | TCTGTTACAACGGTTGGTTA+TGG | + | chr7_1:78012379-78012398 | Msa1040620:CDS | 40.0% |
| !!! | AGAGCTTTTAAGACTCTTCC+GGG | + | chr7_1:78012406-78012425 | Msa1040620:CDS | 40.0% |
| !! | GGCTTTTCTTTATTTGGCTG+AGG | + | chr7_1:78012480-78012499 | Msa1040620:CDS | 40.0% |
| ! | ACATAGGAGATTGGCTAAGA+AGG | + | chr7_1:78012519-78012538 | Msa1040620:CDS | 40.0% |
| GCTGCTGATATCAACAATAC+TGG | + | chr7_1:78012577-78012596 | Msa1040620:CDS | 40.0% | |
| CCGCAATGTAACCATAATTG+TGG | - | chr7_1:78012877-78012896 | None:intergenic | 40.0% | |
| TCTATCCACAATTGCAACTG+CGG | - | chr7_1:78012932-78012951 | None:intergenic | 40.0% | |
| ! | CTGGTAAAGTGTTAATTGGG+GGG | + | chr7_1:78013040-78013059 | Msa1040620:intron | 40.0% |
| ! | TGGTAAAGTGTTAATTGGGG+GGG | + | chr7_1:78013041-78013060 | Msa1040620:intron | 40.0% |
| TGACGACCAAAATTGCTATC+AGG | - | chr7_1:78013067-78013086 | None:intergenic | 40.0% | |
| GCATCATAGTACACAAGTAG+GGG | + | chr7_1:78013398-78013417 | Msa1040620:intron | 40.0% | |
| AACATTACCTCATCTCTTGG+AGG | + | chr7_1:78013670-78013689 | Msa1040620:CDS | 40.0% | |
| ACATTACCTCATCTCTTGGA+GGG | + | chr7_1:78013671-78013690 | Msa1040620:CDS | 40.0% | |
| GGACCTATCATGAATATACC+AGG | + | chr7_1:78013870-78013889 | Msa1040620:intron | 40.0% | |
| ACGTCGCAAGTGACTATATA+AGG | + | chr7_1:78014525-78014544 | Msa1040620:intron | 40.0% | |
| AGTGACTATATAAGGCCACA+AGG | + | chr7_1:78014533-78014552 | Msa1040620:intron | 40.0% | |
| GTGACTATATAAGGCCACAA+GGG | + | chr7_1:78014534-78014553 | Msa1040620:intron | 40.0% | |
| AAGTGGGAAATGAGGGAAAA+TGG | - | chr7_1:78014560-78014579 | None:intergenic | 40.0% | |
| CCTAGAGAGAGAAAATGAAG+TGG | - | chr7_1:78014577-78014596 | None:intergenic | 40.0% | |
| ! | CCACTTCATTTTCTCTCTCT+AGG | + | chr7_1:78014574-78014593 | Msa1040620:intron | 40.0% |
| ! | TGGATGATTATGATGGAGAG+GGG | - | chr7_1:78014645-78014664 | None:intergenic | 40.0% |
| CTTAGCAAGCAAGAAACAAG+TGG | + | chr7_1:78014704-78014723 | Msa1040620:intron | 40.0% | |
| GAGATTAAAGCAGGATTTGG+AGG | + | chr7_1:78014732-78014751 | Msa1040620:intron | 40.0% | |
| TAAAGCAGGATTTGGAGGAA+AGG | + | chr7_1:78014737-78014756 | Msa1040620:intron | 40.0% | |
| AAAGCAGGATTTGGAGGAAA+GGG | + | chr7_1:78014738-78014757 | Msa1040620:intron | 40.0% | |
| TCAAGAATGAAGAGGAAGCT+AGG | + | chr7_1:78014768-78014787 | Msa1040620:intron | 40.0% | |
| CAAGAATGAAGAGGAAGCTA+GGG | + | chr7_1:78014769-78014788 | Msa1040620:intron | 40.0% | |
| TAGATGCTTGAGAAGTTGCA+AGG | + | chr7_1:78014800-78014819 | Msa1040620:intron | 40.0% | |
| GAAGTTGCAAGGAACATGTT+AGG | + | chr7_1:78014811-78014830 | Msa1040620:intron | 40.0% | |
| ! | GGATCAAGTAGGATCAGTTT+TGG | + | chr7_1:78015022-78015041 | Msa1040620:intron | 40.0% |
| TCGCTAATAGCGTAGTTCTT+CGG | - | chr7_1:78015077-78015096 | None:intergenic | 40.0% | |
| GGCTATGTCGTTGAAGGATT+TGG | - | chr7_1:78011654-78011673 | None:intergenic | 45.0% | |
| !! | TGGTGGTGGTTGTTGTTGTA+GGG | - | chr7_1:78011678-78011697 | None:intergenic | 45.0% |
| ATCTCAGATGATTGTGGTGG+TGG | - | chr7_1:78011707-78011726 | None:intergenic | 45.0% | |
| !! | TGTTGTTGGTGGTGTTGTTG+TGG | - | chr7_1:78011749-78011768 | None:intergenic | 45.0% |
| AAGGTGTGGGAGAATGAACA+TGG | - | chr7_1:78011825-78011844 | None:intergenic | 45.0% | |
| ! | GTTTGAGGTTTGGGAAGTTG+AGG | - | chr7_1:78011866-78011885 | None:intergenic | 45.0% |
| ! | GCCTTGTCGAATGATGGAAT+TGG | - | chr7_1:78011888-78011907 | None:intergenic | 45.0% |
| CCAAATGCCTTGTCGAATGA+TGG | - | chr7_1:78011894-78011913 | None:intergenic | 45.0% | |
| ! | CCATCATTCGACAAGGCATT+TGG | + | chr7_1:78011891-78011910 | Msa1040620:CDS | 45.0% |
| ! | CACCGACAGAGAGGTATATA+AGG | - | chr7_1:78011922-78011941 | None:intergenic | 45.0% |
| TTCAAATGGGTGCAAGGGAA+GGG | + | chr7_1:78012188-78012207 | Msa1040620:CDS | 45.0% | |
| ! | AAGGGAAGGGTTTTCTGCTA+GGG | + | chr7_1:78012201-78012220 | Msa1040620:CDS | 45.0% |
| !!! | GGTGTGGTGGTTTTGTGTAT+TGG | + | chr7_1:78012286-78012305 | Msa1040620:CDS | 45.0% |
| !! | GTGTATTGGTGTTGGGAGTT+TGG | + | chr7_1:78012300-78012319 | Msa1040620:CDS | 45.0% |
| AGCTGATGCGACCACAATTA+TGG | + | chr7_1:78012863-78012882 | Msa1040620:intron | 45.0% | |
| GTTATCTTCCCACAGTTCGA+GGG | - | chr7_1:78013653-78013672 | None:intergenic | 45.0% | |
| TGTTATCTTCCCACAGTTCG+AGG | - | chr7_1:78013654-78013673 | None:intergenic | 45.0% | |
| GTGTCAGGTAAACACGACTA+AGG | + | chr7_1:78014483-78014502 | Msa1040620:intron | 45.0% | |
| GTAAACACGACTAAGGCGAA+GGG | + | chr7_1:78014490-78014509 | Msa1040620:intron | 45.0% | |
| AAGTCTAGAGAGAAGGAGGA+GGG | - | chr7_1:78014616-78014635 | None:intergenic | 45.0% | |
| ! | ATGATTATGATGGAGAGGGG+AGG | - | chr7_1:78014642-78014661 | None:intergenic | 45.0% |
| AGCAAGCAAGAAACAAGTGG+AGG | + | chr7_1:78014707-78014726 | Msa1040620:intron | 45.0% | |
| GTGGAGGAAGAGATTAAAGC+AGG | + | chr7_1:78014723-78014742 | Msa1040620:intron | 45.0% | |
| GGATGAATATGGTGCATTGC+AGG | + | chr7_1:78015001-78015020 | Msa1040620:intron | 45.0% | |
| CGCTAATAGCGTAGTTCTTC+GGG | - | chr7_1:78015076-78015095 | None:intergenic | 45.0% | |
| TAGGGTGGCTATGTCGTTGA+AGG | - | chr7_1:78011660-78011679 | None:intergenic | 50.0% | |
| ! | TGGTGGTTGTTGTTGTAGGG+TGG | - | chr7_1:78011675-78011694 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTTGTTGTTGT+AGG | - | chr7_1:78011679-78011698 | None:intergenic | 50.0% |
| !! | TCAGATGATTGTGGTGGTGG+TGG | - | chr7_1:78011704-78011723 | None:intergenic | 50.0% |
| TGTGGGAGAATGAACATGGC+TGG | - | chr7_1:78011821-78011840 | None:intergenic | 50.0% | |
| GAGGTTTGGGAAGTTGAGGT+TGG | - | chr7_1:78011862-78011881 | None:intergenic | 50.0% | |
| CTTCAAATGGGTGCAAGGGA+AGG | + | chr7_1:78012187-78012206 | Msa1040620:CDS | 50.0% | |
| ! | CAAGGGAAGGGTTTTCTGCT+AGG | + | chr7_1:78012200-78012219 | Msa1040620:CDS | 50.0% |
| !! | GGTTGGTTTAGCACTTGGTG+TGG | + | chr7_1:78012270-78012289 | Msa1040620:CDS | 50.0% |
| !! | TGGTTTAGCACTTGGTGTGG+TGG | + | chr7_1:78012273-78012292 | Msa1040620:CDS | 50.0% |
| GACGATTGTTTGCCGCGATT+TGG | + | chr7_1:78012428-78012447 | Msa1040620:CDS | 50.0% | |
| AAGCTTGATCCCTCGAACTG+TGG | + | chr7_1:78013641-78013660 | Msa1040620:CDS | 50.0% | |
| AGCTTGATCCCTCGAACTGT+GGG | + | chr7_1:78013642-78013661 | Msa1040620:CDS | 50.0% | |
| TACCTCATCTCTTGGAGGGT+AGG | + | chr7_1:78013675-78013694 | Msa1040620:CDS | 50.0% | |
| TTACCCATTAGACGCGTCAG+AGG | + | chr7_1:78014324-78014343 | Msa1040620:CDS | 50.0% | |
| TGTCCTCTGACGCGTCTAAT+GGG | - | chr7_1:78014330-78014349 | None:intergenic | 50.0% | |
| TTGTCCTCTGACGCGTCTAA+TGG | - | chr7_1:78014331-78014350 | None:intergenic | 50.0% | |
| TGGGCTTATGTGTCAGTGTC+AGG | + | chr7_1:78014468-78014487 | Msa1040620:intron | 50.0% | |
| GGTAAACACGACTAAGGCGA+AGG | + | chr7_1:78014489-78014508 | Msa1040620:intron | 50.0% | |
| ATGAGGGAAAATGGCCCTTG+TGG | - | chr7_1:78014551-78014570 | None:intergenic | 50.0% | |
| CAAGTCTAGAGAGAAGGAGG+AGG | - | chr7_1:78014617-78014636 | None:intergenic | 50.0% | |
| GGTGCATTGCAGGATCAAGT+AGG | + | chr7_1:78015011-78015030 | Msa1040620:intron | 50.0% | |
| !! | GATGATTGTGGTGGTGGTGG+TGG | - | chr7_1:78011701-78011720 | None:intergenic | 55.0% |
| !!! | TGGCTGGTGCTGTTTTGCAG+CGG | - | chr7_1:78011805-78011824 | None:intergenic | 55.0% |
| ! | CCTTGCACCCATTTGAAGCC+CGG | - | chr7_1:78012185-78012204 | None:intergenic | 55.0% |
| CGGGCTTCAAATGGGTGCAA+GGG | + | chr7_1:78012183-78012202 | Msa1040620:CDS | 55.0% | |
| ATCGCGGCAAACAATCGTCC+CGG | - | chr7_1:78012427-78012446 | None:intergenic | 55.0% | |
| TTGCAACTGCGGACGCATCA+AGG | - | chr7_1:78012921-78012940 | None:intergenic | 55.0% | |
| TGCGTCCGCAGTTGCAATTG+TGG | + | chr7_1:78012924-78012943 | Msa1040620:intron | 55.0% | |
| ! | GGGGGGCCTGATAGCAATTT+TGG | + | chr7_1:78013058-78013077 | Msa1040620:intron | 55.0% |
| GACCTACCCTCCAAGAGATG+AGG | - | chr7_1:78013680-78013699 | None:intergenic | 55.0% | |
| GACTAAGGCGAAGGGCAAAG+TGG | + | chr7_1:78014498-78014517 | Msa1040620:intron | 55.0% | |
| GCGCAAGTCTAGAGAGAAGG+AGG | - | chr7_1:78014620-78014639 | None:intergenic | 55.0% | |
| GAGGCGCAAGTCTAGAGAGA+AGG | - | chr7_1:78014623-78014642 | None:intergenic | 55.0% | |
| AGCGTAGTTCTTCGGGTCTG+TGG | - | chr7_1:78015069-78015088 | None:intergenic | 55.0% | |
| !! | GATTGTGGTGGTGGTGGTGG+TGG | - | chr7_1:78011698-78011717 | None:intergenic | 60.0% |
| CCGGGCTTCAAATGGGTGCA+AGG | + | chr7_1:78012182-78012201 | Msa1040620:CDS | 60.0% | |
| !! | TGTGGTGGTGGTGGTGGTGG+TGG | - | chr7_1:78011695-78011714 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr7_1:78011689-78011708 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 78011505 | 78015109 | 78011505 | ID=Msa1040620;Name=Msa1040620 |
| chr7_1 | mRNA | 78011505 | 78015109 | 78011505 | ID=Msa1040620-mRNA-1;Parent=Msa1040620;Name=Msa1040620-mRNA-1;_AED=0.14;_eAED=0.14;_QI=85|0.33|0.25|0.5|1|1|4|0|439 |
| chr7_1 | exon | 78011505 | 78012608 | 78011505 | ID=Msa1040620-mRNA-1:exon:20733;Parent=Msa1040620-mRNA-1 |
| chr7_1 | exon | 78013556 | 78013696 | 78013556 | ID=Msa1040620-mRNA-1:exon:20734;Parent=Msa1040620-mRNA-1 |
| chr7_1 | exon | 78014314 | 78014386 | 78014314 | ID=Msa1040620-mRNA-1:exon:20735;Parent=Msa1040620-mRNA-1 |
| chr7_1 | exon | 78015023 | 78015109 | 78015023 | ID=Msa1040620-mRNA-1:exon:20736;Parent=Msa1040620-mRNA-1 |
| chr7_1 | five_prime_UTR | 78011505 | 78011589 | 78011505 | ID=Msa1040620-mRNA-1:five_prime_utr;Parent=Msa1040620-mRNA-1 |
| chr7_1 | CDS | 78011590 | 78012608 | 78011590 | ID=Msa1040620-mRNA-1:cds;Parent=Msa1040620-mRNA-1 |
| chr7_1 | CDS | 78013556 | 78013696 | 78013556 | ID=Msa1040620-mRNA-1:cds;Parent=Msa1040620-mRNA-1 |
| chr7_1 | CDS | 78014314 | 78014386 | 78014314 | ID=Msa1040620-mRNA-1:cds;Parent=Msa1040620-mRNA-1 |
| chr7_1 | CDS | 78015023 | 78015109 | 78015023 | ID=Msa1040620-mRNA-1:cds;Parent=Msa1040620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
