AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040720 MtrunA17_Chr7g0270541 96.909 1003 25 4 1 999 1 1001 0.0 1998
Msa1040720 MtrunA17_Chr1g0194121 75.694 1008 223 11 2 999 8 1003 0.0 1475
Msa1040720 MtrunA17_Chr2g0302791 50.294 1020 450 18 18 998 23 1024 0.0 929
Msa1040720 MtrunA17_Chr1g0162871 33.993 606 344 17 412 998 434 1002 1.11e-89 308
Msa1040720 MtrunA17_Chr1g0162871 53.049 164 70 3 110 268 74 235 4.42e-41 164
Msa1040720 MtrunA17_Chr4g0046991 62.366 93 35 0 127 219 58 150 8.93e-34 127
Msa1040720 MtrunA17_Chr8g0360361 67.778 90 29 0 142 231 65 154 4.46e-33 126
Msa1040720 MtrunA17_Chr8g0334671 55.085 118 46 1 106 216 144 261 5.94e-33 130
Msa1040720 MtrunA17_Chr7g0231911 62.500 96 36 0 131 226 138 233 1.59e-32 129
Msa1040720 MtrunA17_Chr8g0386271 57.000 100 42 1 127 226 85 183 1.15e-31 128
Msa1040720 MtrunA17_Chr2g0308321 72.368 76 21 0 140 215 169 244 2.44e-31 130
Msa1040720 MtrunA17_Chr4g0061651 52.000 125 50 2 97 215 76 196 6.16e-31 127
Msa1040720 MtrunA17_Chr5g0420051 66.250 80 27 0 142 221 181 260 6.34e-30 124
Msa1040720 MtrunA17_Chr2g0282521 64.444 90 30 1 127 216 51 138 8.51e-30 115
Msa1040720 MtrunA17_Chr3g0132091 44.961 129 69 1 120 246 51 179 5.13e-29 119
Msa1040720 MtrunA17_Chr7g0258471 68.919 74 23 0 142 215 142 215 3.19e-28 118
Msa1040720 MtrunA17_Chr7g0224821 59.551 89 34 1 127 215 64 150 8.77e-28 116
Msa1040720 MtrunA17_Chr3g0122411 61.250 80 31 0 142 221 165 244 3.33e-26 112
Msa1040720 MtrunA17_Chr2g0286661 25.510 392 229 13 419 762 233 609 1.16e-25 114
Msa1040720 MtrunA17_Chr2g0286661 49.367 79 40 0 142 220 103 181 8.73e-20 95.1
Msa1040720 MtrunA17_Chr8g0377421 48.000 100 52 0 127 226 117 216 9.61e-23 100
Msa1040720 MtrunA17_Chr8g0377401 49.438 89 45 0 126 214 146 234 2.63e-20 91.7
Msa1040720 MtrunA17_Chr2g0317041 65.455 55 19 0 134 188 91 145 2.45e-18 83.2
Msa1040720 MtrunA17_Chr1g0175031 53.704 54 25 0 135 188 67 120 3.34e-13 67.8
Msa1040720 MtrunA17_Chr8g0377431 50.000 56 28 0 142 197 151 206 4.16e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040720 AT2G47070.1 53.181 1006 329 24 2 999 10 881 0.0 946
Msa1040720 AT3G60030.1 53.639 1003 367 23 10 999 10 927 0.0 944
Msa1040720 AT2G47070.2 56.176 842 271 18 166 999 1 752 0.0 865
Msa1040720 AT1G20980.1 31.390 1029 539 29 87 998 56 1034 5.62e-126 409
Msa1040720 AT1G76580.1 32.186 581 346 15 425 998 480 1019 3.15e-79 280
Msa1040720 AT1G76580.1 63.889 108 37 1 142 247 114 221 1.20e-36 150
Msa1040720 AT1G76580.2 63.889 108 37 1 142 247 114 221 2.74e-37 150
Msa1040720 AT1G76580.2 37.104 221 129 5 425 642 480 693 9.74e-32 133
Msa1040720 AT1G76580.3 63.889 108 37 1 142 247 114 221 2.87e-37 150
Msa1040720 AT1G76580.3 37.443 219 127 5 425 640 480 691 3.82e-31 131
Msa1040720 AT1G02065.1 51.449 138 55 3 91 220 133 266 7.44e-33 130
Msa1040720 AT2G33810.1 63.218 87 32 0 133 219 45 131 2.05e-32 122
Msa1040720 AT1G53160.3 66.667 81 27 0 141 221 53 133 2.59e-31 121
Msa1040720 AT1G53160.2 60.417 96 36 1 126 221 40 133 2.80e-31 121
Msa1040720 AT1G53160.1 60.417 96 36 1 126 221 40 133 2.80e-31 121
Msa1040720 AT3G15270.1 64.706 85 30 0 141 225 62 146 3.59e-31 121
Msa1040720 AT1G69170.1 64.444 90 31 1 126 215 109 197 3.95e-30 124
Msa1040720 AT3G57920.1 70.000 80 24 0 136 215 53 132 5.14e-29 120
Msa1040720 AT5G50570.1 53.933 89 41 0 133 221 92 180 4.66e-28 117
Msa1040720 AT5G50570.2 53.933 89 41 0 133 221 92 180 4.66e-28 117
Msa1040720 AT5G50670.1 53.933 89 41 0 133 221 92 180 4.66e-28 117
Msa1040720 AT5G50670.2 53.933 89 41 0 133 221 92 180 4.66e-28 117
Msa1040720 AT5G43270.3 56.701 97 42 0 142 238 169 265 4.74e-28 118
Msa1040720 AT5G43270.1 56.701 97 42 0 142 238 169 265 4.74e-28 118
Msa1040720 AT5G43270.2 56.701 97 42 0 142 238 169 265 4.74e-28 118
Msa1040720 AT2G42200.1 68.919 74 23 0 142 215 74 147 1.57e-26 113
Msa1040720 AT1G27370.6 62.162 74 28 0 142 215 176 249 4.36e-26 111
Msa1040720 AT1G27370.1 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT1G27370.5 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT1G27370.3 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT1G27370.2 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT1G27370.4 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT1G27370.7 62.162 74 28 0 142 215 176 249 6.15e-26 112
Msa1040720 AT5G18830.2 28.906 256 156 5 423 668 303 542 2.27e-25 113
Msa1040720 AT5G18830.2 51.613 93 43 1 127 219 125 215 1.34e-22 104
Msa1040720 AT5G18830.1 28.906 256 156 5 423 668 303 542 2.77e-25 113
Msa1040720 AT5G18830.1 51.613 93 43 1 127 219 125 215 1.32e-22 104
Msa1040720 AT5G18830.3 28.906 256 156 5 423 668 303 542 2.91e-25 113
Msa1040720 AT5G18830.3 51.613 93 43 1 127 219 125 215 1.55e-22 104
Msa1040720 AT1G27360.2 63.514 74 27 0 142 215 175 248 6.07e-25 108
Msa1040720 AT1G27360.1 63.514 74 27 0 142 215 175 248 6.07e-25 108
Msa1040720 AT1G27360.3 63.514 74 27 0 142 215 175 248 6.07e-25 108
Msa1040720 AT1G27360.4 63.514 74 27 0 142 215 175 248 6.07e-25 108
Msa1040720 AT1G02065.2 44.860 107 47 3 91 189 133 235 1.65e-17 83.6

Find 291 sgRNAs with CRISPR-Local

Find 696 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATACACCCCTTCCTTTC+AGG 0.153174 7_1:+78176785 Msa1040720:CDS
TGTATATATTCCGACCTTTC+AGG 0.184193 7_1:+78179924 Msa1040720:CDS
GTGAATGGATCGAGTGAAAT+TGG 0.209517 7_1:-78171331 None:intergenic
AGGTGGGAATCTTTGGATTA+TGG 0.220320 7_1:+78179944 Msa1040720:CDS
TTCTTTGCGTGACAAGAAAA+AGG 0.225603 7_1:-78171215 None:intergenic
TTAAAAGAAGGGTCTTTATC+TGG 0.228394 7_1:+78174105 Msa1040720:CDS
ACCTTTCAGGTGGGAATCTT+TGG 0.233849 7_1:+78179937 Msa1040720:CDS
ATGGTAATTCCTCTGATTTA+AGG 0.234114 7_1:+78171676 Msa1040720:CDS
CGTTCATATACTGGCTAAAC+TGG 0.234689 7_1:+78180032 Msa1040720:three_prime_UTR
TGCACAATTCATCTTTCTTC+TGG 0.235230 7_1:-78179712 None:intergenic
GATTCTCAGGTTCCCGTAAA+AGG 0.235694 7_1:-78174080 None:intergenic
TGAGTTGAGTTGAATTTAAA+AGG 0.240133 7_1:-78171367 None:intergenic
TGCTTTAGAAGGGAATTATT+TGG 0.245183 7_1:+78177065 Msa1040720:CDS
TGGAAATGCTGAAGTTAAAA+AGG 0.255582 7_1:+78179748 Msa1040720:CDS
TTCCAGTTTGAATAGGCTTC+TGG 0.255666 7_1:+78176330 Msa1040720:CDS
AATTTGACGGACAATTTAAT+AGG 0.265714 7_1:+78180006 Msa1040720:three_prime_UTR
CATCTTTCCCGGCTGCTATA+TGG 0.271343 7_1:-78179138 None:intergenic
TTAACCAGTGCCTTGTCTTC+AGG 0.277941 7_1:-78179052 None:intergenic
CATGGATTTCATTCATGAAA+TGG 0.280274 7_1:+78178724 Msa1040720:CDS
GAAGACAAGGCACTGGTTAA+TGG 0.284075 7_1:+78179055 Msa1040720:CDS
AATAGGATGCGTTCATATAC+TGG 0.297183 7_1:+78180023 Msa1040720:three_prime_UTR
AATTTATGTTGTAGCCTTGT+AGG 0.301983 7_1:-78179987 None:intergenic
GTTTGTGAATTCTGTGATTA+TGG 0.303401 7_1:+78171629 Msa1040720:exon
CCTTTCAGGAGTAATAATTA+TGG 0.304697 7_1:+78176799 Msa1040720:CDS
ACTAGGTTTAGGTTTGAATA+AGG 0.311923 7_1:+78171938 Msa1040720:CDS
GGTTCGTTTGAATTCTAGTA+TGG 0.313368 7_1:+78178784 Msa1040720:CDS
TGAAGATACTCATGAGCTTA+TGG 0.315985 7_1:+78177092 Msa1040720:CDS
GTGGAAGATGAACTAGGTTT+AGG 0.325951 7_1:+78171927 Msa1040720:CDS
AGGTTATTGTGTGCTTTAGA+AGG 0.329096 7_1:+78177054 Msa1040720:intron
ACAGAAAGCAAATAAAATCT+AGG 0.329856 7_1:+78178759 Msa1040720:CDS
CAGGGACAGAACATGAAAAT+TGG 0.330494 7_1:-78177152 None:intergenic
GTTTGGCAGGCCATAATAAA+AGG 0.331564 7_1:+78172383 Msa1040720:CDS
TGCTCAGAACAGTTAGATCT+TGG 0.332790 7_1:+78171861 Msa1040720:CDS
GGGATTTGAATAGTTGGAAA+TGG 0.337890 7_1:+78171724 Msa1040720:CDS
GCTACATGGGAAGGAAATAA+TGG 0.338198 7_1:+78172002 Msa1040720:CDS
TGAAGGAAGGTGAGAGGAAG+AGG 0.356291 7_1:+78171895 Msa1040720:CDS
TATCTTGCACTTTCAGAGTT+GGG 0.367463 7_1:+78178938 Msa1040720:CDS
TGGTAATTCCTCTGATTTAA+GGG 0.374391 7_1:+78171677 Msa1040720:CDS
CTATTGAACCTCATGCTTGA+TGG 0.376008 7_1:+78178884 Msa1040720:CDS
GCCACCATTGACAGCATTGC+AGG 0.376137 7_1:-78179845 None:intergenic
TTTCCAGCCCCTTCAACATC+TGG 0.378764 7_1:-78178680 None:intergenic
GCTTCGCCAGTGGAACTAGA+AGG 0.378856 7_1:-78174540 None:intergenic
TCATTATACTTACATTCATT+TGG 0.379587 7_1:+78179607 Msa1040720:CDS
TTCCTCTGATTTAAGGGCTA+TGG 0.385188 7_1:+78171683 Msa1040720:CDS
AATCAAGATGCTGTTCCTAA+TGG 0.389375 7_1:+78172418 Msa1040720:CDS
ATCTGACTTCCAGTTTGAAT+AGG 0.389914 7_1:+78176323 Msa1040720:CDS
GTGGTGGTGTTGGTGCTACA+TGG 0.398169 7_1:+78171988 Msa1040720:CDS
TTGGTCTCCAGATTCTTGAT+TGG 0.398756 7_1:+78176092 Msa1040720:intron
CTGATATTGAAGGATATATA+CGG 0.402032 7_1:+78176131 Msa1040720:CDS
GAACTAACCTACTACATTGT+TGG 0.402517 7_1:-78172196 None:intergenic
CTACTTTGGATCACTCGTAT+TGG 0.403181 7_1:+78180264 Msa1040720:three_prime_UTR
AGCCACTTGAATCGATCTAA+TGG 0.406206 7_1:-78178815 None:intergenic
GAACTGGATGGGTTCACATC+AGG 0.406435 7_1:+78176377 Msa1040720:CDS
TGGCTTGTGTCGAACTTTGT+CGG 0.407195 7_1:-78179692 None:intergenic
TTTGACTATTTATCTGCGTC+AGG 0.409326 7_1:+78176168 Msa1040720:CDS
AAGAATGGGATTTGAATAGT+TGG 0.409761 7_1:+78171718 Msa1040720:CDS
GGATTTGAATAGTTGGAAAT+GGG 0.410489 7_1:+78171725 Msa1040720:CDS
ATGGATTTCATTCATGAAAT+GGG 0.410942 7_1:+78178725 Msa1040720:CDS
CTGTGTGCTTGAGCCTCTAC+TGG 0.413919 7_1:+78178640 Msa1040720:CDS
TGTACTCTTACTTGATCTAT+AGG 0.416568 7_1:+78171559 Msa1040720:five_prime_UTR
CCACCACCACCAACCGGAAT+AGG 0.416724 7_1:-78171810 None:intergenic
TCGTTCGGTGAACTTCCATT+AGG 0.417682 7_1:-78172433 None:intergenic
ACTCTGAAAGTGCAAGATAC+AGG 0.418841 7_1:-78178934 None:intergenic
GAGGAAGAGGGTTCTTATTG+TGG 0.419784 7_1:+78171908 Msa1040720:CDS
TCCTCTGATTTAAGGGCTAT+GGG 0.419815 7_1:+78171684 Msa1040720:CDS
ATCCAGAAGCCTATTCAAAC+TGG 0.420131 7_1:-78176332 None:intergenic
TGATTACCCATGGATGCAAC+AGG 0.424656 7_1:+78174455 Msa1040720:CDS
GCTCAGAACAGTTAGATCTT+GGG 0.426023 7_1:+78171862 Msa1040720:CDS
CCTGATGCTGTCGGTCCTGC+TGG 0.426837 7_1:+78179103 Msa1040720:CDS
TTATCATGCGGCCTCTACTT+TGG 0.429413 7_1:+78180250 Msa1040720:three_prime_UTR
TTGTGCACTACCTTTGAGAT+TGG 0.431132 7_1:+78179728 Msa1040720:CDS
GTATCTTGCACTTTCAGAGT+TGG 0.431765 7_1:+78178937 Msa1040720:CDS
TTTGATGATGGTACAGCAAT+TGG 0.432107 7_1:-78176841 None:intergenic
CTGCCTGTCACTACAAATCT+TGG 0.432579 7_1:+78174420 Msa1040720:CDS
GAAGTACGGTTGGGTGGAAA+AGG 0.434493 7_1:-78171298 None:intergenic
TTTCAATTGTACGGTAATGA+TGG 0.435790 7_1:+78171657 Msa1040720:CDS
AAGAAGCTGTCGAAGACGTT+TGG 0.436466 7_1:+78172366 Msa1040720:CDS
ACCTTGTGGCAGGTCGAGTC+AGG 0.438034 7_1:-78176894 None:intergenic
CTGTCCAGCAGTACTATCTC+TGG 0.440583 7_1:-78174325 None:intergenic
TGAATGGATCGAGTGAAATT+GGG 0.442040 7_1:-78171330 None:intergenic
CAGATCAAAATCATTCATCT+TGG 0.443030 7_1:-78174349 None:intergenic
ATCCTCAGAACCATCTTTCC+CGG 0.448875 7_1:-78179149 None:intergenic
TAACTACCGCACACCAATCA+TGG 0.449202 7_1:-78178856 None:intergenic
CGGAATATATACAGAACTTC+CGG 0.452521 7_1:-78179914 None:intergenic
TCTGAATTTCCACTTGTTTG+AGG 0.453259 7_1:-78174498 None:intergenic
CTGAAGCTCATCAAGATCCT+TGG 0.455535 7_1:-78177124 None:intergenic
CCAGCAGGACCGACAGCATC+AGG 0.458652 7_1:-78179103 None:intergenic
CTTATTGTGGAAGATGAACT+AGG 0.459809 7_1:+78171921 Msa1040720:CDS
GATACATTCAAAGGCTAGTA+AGG 0.462061 7_1:+78172142 Msa1040720:CDS
CCTATTCCGGTTGGTGGTGG+TGG 0.463981 7_1:+78171810 Msa1040720:CDS
CAGTGGAACTAGAAGGGGAC+TGG 0.466134 7_1:-78174533 None:intergenic
AGTTCTCTGTGGACCATGAT+TGG 0.466958 7_1:+78178843 Msa1040720:CDS
TAGTTCCACTGGCGAAGCTC+AGG 0.467544 7_1:+78174545 Msa1040720:CDS
TATTTATCTGCGTCAGGCTG+AGG 0.471576 7_1:+78176174 Msa1040720:CDS
CCTGAGAATCTGTTAAAAGA+AGG 0.472343 7_1:+78174093 Msa1040720:CDS
GAGAAATAGCAGGCAGTTGG+TGG 0.474116 7_1:+78178982 Msa1040720:CDS
TATCCAGATGTTGAAGGGGC+TGG 0.474205 7_1:+78178677 Msa1040720:CDS
GGGAAGAAAAGTAGAGTAGC+TGG 0.477037 7_1:+78172023 Msa1040720:CDS
CAAAATATTTCAGATAAACT+AGG 0.478759 7_1:+78179028 Msa1040720:CDS
TCCTTTCATAGTCGTGGAGG+AGG 0.480311 7_1:+78178601 Msa1040720:CDS
CAGTCCCCTTCTAGTTCCAC+TGG 0.483978 7_1:+78174534 Msa1040720:CDS
AACATGCCAGATTGAGGACC+AGG 0.487015 7_1:+78178559 Msa1040720:intron
CTCGTATTGGTTGACTGAAA+AGG 0.487590 7_1:+78180277 Msa1040720:three_prime_UTR
GGGGTGTATCAATGACAATC+TGG 0.488591 7_1:-78176774 None:intergenic
TCGAACTTTGTCGGAATGCT+AGG 0.490308 7_1:-78179683 None:intergenic
AATCTTAGTTTAAACCTTGG+TGG 0.493064 7_1:+78171969 Msa1040720:CDS
TTGTTTAGACCTGATGCTGT+CGG 0.493104 7_1:+78179094 Msa1040720:CDS
GTCAAATCAGACCGCCGACC+AGG 0.493204 7_1:+78173987 Msa1040720:CDS
CATATAGCAGCCGGGAAAGA+TGG 0.493229 7_1:+78179139 Msa1040720:CDS
GGTTTAGGTTTGAATAAGGA+AGG 0.497519 7_1:+78171942 Msa1040720:CDS
GAAGCCAGAGATAGTACTGC+TGG 0.499262 7_1:+78174321 Msa1040720:CDS
TTCAATATCAGTTGGACTGT+GGG 0.499678 7_1:-78176119 None:intergenic
TTTATCTGGGAAGTCTGAGA+TGG 0.499962 7_1:+78174119 Msa1040720:CDS
CAAGATACCATTGAAAATGA+AGG 0.500592 7_1:-78176416 None:intergenic
AATAGTGCCCGCGACAGCAC+GGG 0.501464 7_1:+78179551 Msa1040720:CDS
ATTTCATTCATGAAATGGGT+TGG 0.501491 7_1:+78178729 Msa1040720:CDS
TGTTGACCCCGTGCTGTCGC+GGG 0.502204 7_1:-78179558 None:intergenic
TTAAACCTTGGTGGTGGTGT+TGG 0.502647 7_1:+78171978 Msa1040720:CDS
GAAAGTGCGGGAAGTACGGT+TGG 0.502726 7_1:-78171308 None:intergenic
CTACTAGTCTGATCATCGTT+CGG 0.504746 7_1:-78172448 None:intergenic
CTGATGCTTGTCAACCTACA+AGG 0.505049 7_1:+78179973 Msa1040720:exon
CTAGCTCTCTTGATTACCCA+TGG 0.506626 7_1:+78174445 Msa1040720:CDS
TAAAAGAAGGGTCTTTATCT+GGG 0.507742 7_1:+78174106 Msa1040720:CDS
CACAGTCCAACTGATATTGA+AGG 0.508704 7_1:+78176121 Msa1040720:CDS
CCCCATAGCCCTTAAATCAG+AGG 0.508712 7_1:-78171685 None:intergenic
GGTAATCTTAGTTTAAACCT+TGG 0.509670 7_1:+78171966 Msa1040720:CDS
GGTTAATTAAGAAGAGTGAA+TGG 0.509959 7_1:-78171346 None:intergenic
GAACAACCACCACCACCAAC+CGG 0.510451 7_1:-78171816 None:intergenic
TGTTCTGTCCCTGCGATGAA+TGG 0.511696 7_1:+78177162 Msa1040720:CDS
AATTGGCGGTGTTCCGGCAC+CGG 0.511950 7_1:-78171783 None:intergenic
AAGGCTAGTAAGGCCCTTGT+CGG 0.515263 7_1:+78172152 Msa1040720:CDS
CTACATGGGAAGGAAATAAT+GGG 0.516126 7_1:+78172003 Msa1040720:CDS
GAAGGAAGGTGAGAGGAAGA+GGG 0.516971 7_1:+78171896 Msa1040720:CDS
AACCCTCGTCCATTCATCGC+AGG 0.517005 7_1:-78177171 None:intergenic
TGATGCATTCACATGATGCT+AGG 0.517823 7_1:+78174232 Msa1040720:CDS
AGGAGTCTTGCTAATCAGAA+TGG 0.518289 7_1:+78174030 Msa1040720:CDS
TCCTCTTGTACTTAGAGCAC+AGG 0.518622 7_1:+78175994 Msa1040720:CDS
GGTTCTGCCAACAATGTAGT+AGG 0.519358 7_1:+78172189 Msa1040720:CDS
TCCTTGTGAGACTGCATGTG+TGG 0.520234 7_1:+78180122 Msa1040720:three_prime_UTR
GCACCAAGATTTGTAGTGAC+AGG 0.520401 7_1:-78174423 None:intergenic
GTGTTGACCCCGTGCTGTCG+CGG 0.520572 7_1:-78179559 None:intergenic
AATTATTACTCCTGAAAGGA+AGG 0.522122 7_1:-78176795 None:intergenic
AGGCTACAACATAAATTTGA+CGG 0.523361 7_1:+78179993 Msa1040720:three_prime_UTR
AAATGATGTGTGTGTACTGA+TGG 0.524150 7_1:-78171273 None:intergenic
GCTAATCAGAATGGCGAACA+AGG 0.524392 7_1:+78174039 Msa1040720:CDS
TTGGGAAAGTGCGGGAAGTA+CGG 0.524571 7_1:-78171312 None:intergenic
CCATTTAGAATCGCACGGAT+CGG 0.524737 7_1:+78175933 Msa1040720:intron
GATACTTATCCAGATGTTGA+AGG 0.525295 7_1:+78178671 Msa1040720:CDS
GGTTATTGTGTGCTTTAGAA+GGG 0.527744 7_1:+78177055 Msa1040720:intron
TGTGAATCCTGTTGCATCCA+TGG 0.528171 7_1:-78174462 None:intergenic
TCCTCCTCCACGACTATGAA+AGG 0.528181 7_1:-78178602 None:intergenic
AAAAGTAGAGTAGCTGGTGG+AGG 0.528723 7_1:+78172029 Msa1040720:CDS
GGCTGAGGTTGTGTGGGAGG+AGG 0.530578 7_1:+78176189 Msa1040720:CDS
CTTAGTTTAAACCTTGGTGG+TGG 0.531572 7_1:+78171972 Msa1040720:CDS
GTTTCTACTTTAGTTACCGA+TGG 0.533019 7_1:+78174141 Msa1040720:CDS
CTTCGCCAGTGGAACTAGAA+GGG 0.533313 7_1:-78174539 None:intergenic
CAGAAAGCAAATAAAATCTA+GGG 0.536295 7_1:+78178760 Msa1040720:CDS
AGCTGTCGAAGACGTTTGGC+AGG 0.538625 7_1:+78172370 Msa1040720:CDS
AATTGAGCTGTCTTTGATGA+TGG 0.538817 7_1:-78176853 None:intergenic
AAAAGGGCTATGTTAATGGA+AGG 0.539039 7_1:-78171198 None:intergenic
GTCAAGTGAAGGAAGGTGAG+AGG 0.539444 7_1:+78171889 Msa1040720:CDS
GTCCCTGCGATGAATGGACG+AGG 0.539835 7_1:+78177168 Msa1040720:CDS
GAATTTCCACTTGTTTGAGG+TGG 0.542056 7_1:-78174495 None:intergenic
ATATATCCTTCAATATCAGT+TGG 0.543073 7_1:-78176127 None:intergenic
AAAGATGAGTAAGCAGATCC+TGG 0.543962 7_1:-78174005 None:intergenic
ACACCACTCCATATAGCAGC+CGG 0.544335 7_1:+78179130 Msa1040720:CDS
GAATAGTGCCCGCGACAGCA+CGG 0.545251 7_1:+78179550 Msa1040720:CDS
AACTGGATGGGTTCACATCA+GGG 0.545764 7_1:+78176378 Msa1040720:CDS
CTCTGAAAGTGCAAGATACA+GGG 0.546020 7_1:-78178933 None:intergenic
TGGTGGTGTTGGTGCTACAT+GGG 0.547732 7_1:+78171989 Msa1040720:CDS
TTAATTAACTATGACTGTGT+CGG 0.548090 7_1:+78171536 Msa1040720:five_prime_UTR
AAAGTGCGGGAAGTACGGTT+GGG 0.548494 7_1:-78171307 None:intergenic
TTGCCTATTCCGGTTGGTGG+TGG 0.548521 7_1:+78171807 Msa1040720:CDS
AGTAAAGAATACCTTGTGGC+AGG 0.549712 7_1:-78176904 None:intergenic
AAGTACGGTTGGGTGGAAAA+GGG 0.550900 7_1:-78171297 None:intergenic
TGGAGGGCTATTTGAAACAC+CGG 0.552422 7_1:-78174289 None:intergenic
TGCGTCAGGCTGAGGTTGTG+TGG 0.553151 7_1:+78176182 Msa1040720:CDS
AAGAAAATCAACAAGAGTCA+AGG 0.555072 7_1:+78179635 Msa1040720:CDS
CTGAGAATCTGTTAAAAGAA+GGG 0.556543 7_1:+78174094 Msa1040720:CDS
ACCGGGCTTTGCAGAAAATG+TGG 0.556990 7_1:-78174271 None:intergenic
TAGTAAGTTGACTCCGGTGC+CGG 0.557954 7_1:+78171770 Msa1040720:CDS
AGTACAAGAGGAAAATCGCT+TGG 0.559448 7_1:-78175983 None:intergenic
CGTAACCGTGCATAATCCTC+AGG 0.560195 7_1:-78179581 None:intergenic
ATTGAAGGATATATACGGCC+TGG 0.560219 7_1:+78176136 Msa1040720:CDS
TCAGGCTGAGGTTGTGTGGG+AGG 0.560360 7_1:+78176186 Msa1040720:CDS
CATTTCATGAATGAAATCCA+TGG 0.560753 7_1:-78178723 None:intergenic
ATACTTATCCAGATGTTGAA+GGG 0.561009 7_1:+78178672 Msa1040720:CDS
TCTTGGGATTTGTCAAGTGA+AGG 0.561746 7_1:+78171878 Msa1040720:CDS
TTAGTTACCGATGGTTCTCA+AGG 0.565161 7_1:+78174150 Msa1040720:CDS
GTGCAAGATACAGGGATATG+TGG 0.565281 7_1:-78178925 None:intergenic
CTGGCTTCTGAGTAAGCTGG+AGG 0.566231 7_1:-78174306 None:intergenic
CTTGATGGAACAGTGAGTAC+AGG 0.567632 7_1:+78178899 Msa1040720:CDS
ACCTGTGCTCTAAGTACAAG+AGG 0.568862 7_1:-78175995 None:intergenic
TTCAGGTGGGAATTGAAGCA+TGG 0.570988 7_1:+78179528 Msa1040720:intron
TTCAGCATTTCCAATCTCAA+AGG 0.571428 7_1:-78179738 None:intergenic
TCTCTGGCTTCTGAGTAAGC+TGG 0.571429 7_1:-78174309 None:intergenic
TGGAGTGGTGTCAAACCAGC+AGG 0.572947 7_1:-78179118 None:intergenic
CCATAATTATTACTCCTGAA+AGG 0.573935 7_1:-78176799 None:intergenic
TTCTCCTCACAGCTCTGTGA+AGG 0.574334 7_1:-78178964 None:intergenic
CAGACCTGCAATGCTGTCAA+TGG 0.575070 7_1:+78179841 Msa1040720:CDS
CATCAGGGTGCAGCATCAGA+TGG 0.579332 7_1:+78176393 Msa1040720:CDS
ATCTATATTGACTCAGACGA+TGG 0.581568 7_1:+78174378 Msa1040720:CDS
GTATCACTTGATTCCAGTAG+AGG 0.583315 7_1:-78178653 None:intergenic
TCCAAAGATTCCCACCTGAA+AGG 0.584115 7_1:-78179938 None:intergenic
TCGAGTCCACCTCAAACAAG+TGG 0.586688 7_1:+78174489 Msa1040720:CDS
ATTATTACTCCTGAAAGGAA+GGG 0.587708 7_1:-78176794 None:intergenic
TTAGGTTTGAATAAGGAAGG+TGG 0.588842 7_1:+78171945 Msa1040720:CDS
AAGATTCCCACCTGAAAGGT+CGG 0.589390 7_1:-78179934 None:intergenic
TTATTACTCCTGAAAGGAAG+GGG 0.590283 7_1:-78176793 None:intergenic
ATGGCATAGAGGACATAGAA+AGG 0.590295 7_1:+78174397 Msa1040720:CDS
TAATGAGTTTACTTATCATG+CGG 0.591583 7_1:+78180238 Msa1040720:three_prime_UTR
TTCGCCAGTGGAACTAGAAG+GGG 0.593774 7_1:-78174538 None:intergenic
GAGTGAAATTGGGAAAGTGC+GGG 0.593959 7_1:-78171320 None:intergenic
TTCCATTAGATCGATTCAAG+TGG 0.595205 7_1:+78178813 Msa1040720:CDS
TTCCCGGCTGCTATATGGAG+TGG 0.595339 7_1:-78179133 None:intergenic
GGGATTTGTCAAGTGAAGGA+AGG 0.595664 7_1:+78171882 Msa1040720:CDS
CTTCAATATCAGTTGGACTG+TGG 0.596443 7_1:-78176120 None:intergenic
GCTGCATCGCATTTCCGACA+AGG 0.596748 7_1:-78172166 None:intergenic
AAGAAAAGTAGAGTAGCTGG+TGG 0.598248 7_1:+78172026 Msa1040720:CDS
AGTGGAACTAGAAGGGGACT+GGG 0.598471 7_1:-78174532 None:intergenic
GGAGGGCTATTTGAAACACC+GGG 0.598567 7_1:-78174288 None:intergenic
GAGTCAAGGAGGGGCTCACG+TGG 0.601404 7_1:+78179649 Msa1040720:CDS
TGATTCTGTACTGTAACAGT+TGG 0.603417 7_1:-78174177 None:intergenic
AGCTACTAGTAAGTTGACTC+CGG 0.603545 7_1:+78171764 Msa1040720:CDS
CGAGTGAAATTGGGAAAGTG+CGG 0.603867 7_1:-78171321 None:intergenic
CTAATCAGAATGGCGAACAA+GGG 0.604164 7_1:+78174040 Msa1040720:CDS
TGTGTGTGTACTGATGGAGA+TGG 0.604912 7_1:-78171267 None:intergenic
GTGCGGGAAGTACGGTTGGG+TGG 0.605471 7_1:-78171304 None:intergenic
GGTGTTGGTGCTACATGGGA+AGG 0.605894 7_1:+78171993 Msa1040720:CDS
GCGTCAGGCTGAGGTTGTGT+GGG 0.606741 7_1:+78176183 Msa1040720:CDS
GTGAATCCTGTTGCATCCAT+GGG 0.607464 7_1:-78174461 None:intergenic
AGGACCTGAAGACAAGGCAC+TGG 0.607641 7_1:+78179048 Msa1040720:CDS
CTGCATCGCATTTCCGACAA+GGG 0.607873 7_1:-78172165 None:intergenic
AGATCGATTCAAGTGGCTCG+TGG 0.608145 7_1:+78178820 Msa1040720:CDS
GAGGAGAAATAGCAGGCAGT+TGG 0.608350 7_1:+78178979 Msa1040720:CDS
GAATGGACGAGGGTTTATTG+AGG 0.611377 7_1:+78177179 Msa1040720:CDS
AGTTTGTGAGATACATTCAA+AGG 0.612307 7_1:+78172133 Msa1040720:CDS
CACCACTCCATATAGCAGCC+GGG 0.612629 7_1:+78179131 Msa1040720:CDS
TCTTCTATTCAAAAGCTCGC+CGG 0.612868 7_1:+78179895 Msa1040720:CDS
GAGCTGTGAGGAGAAATAGC+AGG 0.613146 7_1:+78178972 Msa1040720:CDS
TGGAGAACCTTGAGAACCAT+CGG 0.614723 7_1:-78174157 None:intergenic
TTTGACTAATGATCCTTGCA+TGG 0.616174 7_1:+78179183 Msa1040720:CDS
TTCCACCATTTAGAATCGCA+CGG 0.619213 7_1:+78175928 Msa1040720:intron
GTCAATGGTGGCTATAGCAG+CGG 0.620908 7_1:+78179856 Msa1040720:CDS
ACCTGACTCGACCTGCCACA+AGG 0.620977 7_1:+78176893 Msa1040720:CDS
ATATATTCCGACCTTTCAGG+TGG 0.622453 7_1:+78179927 Msa1040720:CDS
ACCCTCGTCCATTCATCGCA+GGG 0.622638 7_1:-78177170 None:intergenic
ATAGTGCCCGCGACAGCACG+GGG 0.624692 7_1:+78179552 Msa1040720:CDS
AAAGGGCTATGTTAATGGAA+GGG 0.624971 7_1:-78171197 None:intergenic
TTGTCGGAAATGCGATGCAG+CGG 0.625371 7_1:+78172168 Msa1040720:CDS
TACTTATCCAGATGTTGAAG+GGG 0.625894 7_1:+78178673 Msa1040720:CDS
CAGCACGGGGTCAACACCTG+AGG 0.627470 7_1:+78179565 Msa1040720:CDS
TAATCAGAATGGCGAACAAG+GGG 0.629708 7_1:+78174041 Msa1040720:CDS
GAGGATTATGCACGGTTACG+TGG 0.631447 7_1:+78179584 Msa1040720:CDS
CCTCTGATTTAAGGGCTATG+GGG 0.632165 7_1:+78171685 Msa1040720:CDS
GTTCATATACTGGCTAAACT+GGG 0.632869 7_1:+78180033 Msa1040720:three_prime_UTR
TGGCTTCTGAGTAAGCTGGA+GGG 0.633247 7_1:-78174305 None:intergenic
TCCACACATGCAGTCTCACA+AGG 0.633841 7_1:-78180123 None:intergenic
AAATCAACAAGAGTCAAGGA+GGG 0.635293 7_1:+78179639 Msa1040720:CDS
AAAATCAACAAGAGTCAAGG+AGG 0.635540 7_1:+78179638 Msa1040720:CDS
GCTATGTTAATGGAAGGGTA+TGG 0.636239 7_1:-78171192 None:intergenic
TGACTCAGACGATGGCATAG+AGG 0.639188 7_1:+78174386 Msa1040720:CDS
TTGCTTCAAGAGTTTGACGA+AGG 0.640841 7_1:+78172340 Msa1040720:CDS
GATGCATTCACATGATGCTA+GGG 0.641130 7_1:+78174233 Msa1040720:CDS
TCAAGGAGGGGCTCACGTGG+TGG 0.642540 7_1:+78179652 Msa1040720:CDS
GTGGCTCGTGGAGTTCTCTG+TGG 0.643500 7_1:+78178832 Msa1040720:CDS
AGCCGGGAAAGATGGTTCTG+AGG 0.645502 7_1:+78179147 Msa1040720:CDS
ATGAGTAAGCAGATCCTGGT+CGG 0.645833 7_1:-78174001 None:intergenic
AAAGCAAATAAAATCTAGGG+TGG 0.646286 7_1:+78178763 Msa1040720:CDS
TAAACTAGGACCTGAAGACA+AGG 0.648850 7_1:+78179042 Msa1040720:CDS
AATCAACAAGAGTCAAGGAG+GGG 0.649223 7_1:+78179640 Msa1040720:CDS
GCTTATGGATCAATGCTCCA+AGG 0.659761 7_1:+78177107 Msa1040720:CDS
AAATACCTGAGCTTCGCCAG+TGG 0.661952 7_1:-78174550 None:intergenic
TCAGGTGGAGGATTGTCGCG+CGG 0.662045 7_1:+78172073 Msa1040720:CDS
ACCTGCAATGCTGTCAATGG+TGG 0.664454 7_1:+78179844 Msa1040720:CDS
ATAGTCAAAACAACACAACC+AGG 0.668652 7_1:-78176154 None:intergenic
TATATTCCGACCTTTCAGGT+GGG 0.670018 7_1:+78179928 Msa1040720:CDS
AGCAGCGGTCTGTGTCTGTG+TGG 0.670428 7_1:+78179871 Msa1040720:CDS
TATTATGCTATTGTACAACA+AGG 0.670861 7_1:-78180185 None:intergenic
ATACGAGTGATCCAAAGTAG+AGG 0.677059 7_1:-78180261 None:intergenic
AGTAAGCAGATCCTGGTCGG+CGG 0.677788 7_1:-78173998 None:intergenic
TGGCAGGCCATAATAAAAGG+AGG 0.679908 7_1:+78172386 Msa1040720:CDS
TCTCACAAACTTTATGACGT+CGG 0.680002 7_1:-78172121 None:intergenic
TCACTGTTCCATCAAGCATG+AGG 0.684334 7_1:-78178892 None:intergenic
ACATGCCAGATTGAGGACCA+GGG 0.686651 7_1:+78178560 Msa1040720:intron
TCCCTGCGATGAATGGACGA+GGG 0.688704 7_1:+78177169 Msa1040720:CDS
GTCTCCTTCACAGAGCTGTG+AGG 0.689109 7_1:+78178960 Msa1040720:CDS
CAACACCTGAGGATTATGCA+CGG 0.704327 7_1:+78179576 Msa1040720:CDS
TAGCACCAACACCACCACCA+AGG 0.720242 7_1:-78171983 None:intergenic
TGTGGACCATGATTGGTGTG+CGG 0.729884 7_1:+78178850 Msa1040720:CDS
AATCAGAATGGCGAACAAGG+GGG 0.742654 7_1:+78174042 Msa1040720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATTTAATATATATAA+GGG - chr7_1:78175867-78175886 None:intergenic 0.0%
!!! AATTTTTTAAAAGATGAAAT+TGG + chr7_1:78172643-78172662 Msa1040720:intron 10.0%
!!! AGTTTGTTTTATTATTTATT+TGG - chr7_1:78173665-78173684 None:intergenic 10.0%
!! TATGTTAATTTATTTCAAAA+CGG + chr7_1:78175088-78175107 Msa1040720:intron 10.0%
!! AAAGAAAAAAACAATTATTT+AGG + chr7_1:78175429-78175448 Msa1040720:intron 10.0%
!! TTAATAGTATAACAATTTAT+AGG - chr7_1:78177343-78177362 None:intergenic 10.0%
!! AACAAAAAAAAAAATCTAAA+AGG - chr7_1:78178125-78178144 None:intergenic 10.0%
!! TTACTTAAAAATCATAATAT+AGG - chr7_1:78178352-78178371 None:intergenic 10.0%
!! AAATTATTATGAAAAAAAGA+GGG - chr7_1:78179430-78179449 None:intergenic 10.0%
!! AAAATTATTATGAAAAAAAG+AGG - chr7_1:78179431-78179450 None:intergenic 10.0%
!!! ATCAATTTTAATAGTTAGAT+TGG + chr7_1:78172264-78172283 Msa1040720:intron 15.0%
!! AAGGAAAATAATAATTTCTT+TGG + chr7_1:78173298-78173317 Msa1040720:intron 15.0%
!! AGGAAAATAATAATTTCTTT+GGG + chr7_1:78173299-78173318 Msa1040720:intron 15.0%
!!! TTCTTGAGATTATTATATTT+TGG - chr7_1:78174817-78174836 None:intergenic 15.0%
!! GAAATAATTTAATCATACTA+AGG + chr7_1:78176067-78176086 Msa1040720:intron 15.0%
!! AATTTACATTAAATGCTTAA+AGG + chr7_1:78176538-78176557 Msa1040720:intron 15.0%
!! ATTGTCCTTAATAAATAATA+TGG + chr7_1:78177932-78177951 Msa1040720:intron 15.0%
!! TTGTCCTTAATAAATAATAT+GGG + chr7_1:78177933-78177952 Msa1040720:intron 15.0%
!! TAAATAGTTAAGGTTATAAT+AGG + chr7_1:78177992-78178011 Msa1040720:intron 15.0%
!! CATATAAATGACAATTTATA+AGG - chr7_1:78178437-78178456 None:intergenic 15.0%
!! AATTATTATGAAAAAAAGAG+GGG - chr7_1:78179429-78179448 None:intergenic 15.0%
!!! TAATAATTTTCATTTCAAGT+TGG + chr7_1:78179441-78179460 Msa1040720:intron 15.0%
!!! TATTCTTTTATTATGACAAC+AGG + chr7_1:78172311-78172330 Msa1040720:intron 20.0%
!!! TTGTTTGTTCATTTGAAATT+TGG + chr7_1:78172692-78172711 Msa1040720:intron 20.0%
!! ATAGACTCTAACAAAATATT+AGG - chr7_1:78173382-78173401 None:intergenic 20.0%
!! TAATTACACTAAGACATATT+TGG - chr7_1:78173747-78173766 None:intergenic 20.0%
!! AGATAAATGTCAGTTTAAAA+AGG + chr7_1:78173818-78173837 Msa1040720:intron 20.0%
!!! ACTACAAATGTTTTTTATTG+TGG + chr7_1:78174701-78174720 Msa1040720:intron 20.0%
!!! TCCAATATTTTTTACATTAG+CGG - chr7_1:78175050-78175069 None:intergenic 20.0%
!! ATAAATTAACATACATGTAG+CGG - chr7_1:78175081-78175100 None:intergenic 20.0%
!!! TTAACTTTTTTGATAGTAGA+TGG - chr7_1:78175216-78175235 None:intergenic 20.0%
!! TTAGAAATGTTGATCAATTA+GGG - chr7_1:78175270-78175289 None:intergenic 20.0%
!! TTTAGAAATGTTGATCAATT+AGG - chr7_1:78175271-78175290 None:intergenic 20.0%
!!! AAACATTAAGATGAGTATTT+TGG + chr7_1:78175589-78175608 Msa1040720:intron 20.0%
!!! ATTTAATCATACTAAGGTTT+TGG + chr7_1:78176073-78176092 Msa1040720:intron 20.0%
!!! AGTAGTATATTTTTATGACT+AGG + chr7_1:78176718-78176737 Msa1040720:intron 20.0%
!! ATATGTTAGTATCATTAGAT+TGG + chr7_1:78177474-78177493 Msa1040720:intron 20.0%
!!! GTTTTTCACTTTTTAAGAAA+TGG - chr7_1:78177618-78177637 None:intergenic 20.0%
!! CTTTCCCATATTATTTATTA+AGG - chr7_1:78177940-78177959 None:intergenic 20.0%
!! ATAAATGACAATTTATAAGG+AGG - chr7_1:78178434-78178453 None:intergenic 20.0%
!! AAGAATATGACACATTTATA+AGG - chr7_1:78178474-78178493 None:intergenic 20.0%
!!! AGTTTATCTGAAATATTTTG+AGG - chr7_1:78179028-78179047 None:intergenic 20.0%
!! CAAAATATTTCAGATAAACT+AGG + chr7_1:78179028-78179047 Msa1040720:CDS 20.0%
!! AAACTATTACAAACAATGTT+TGG + chr7_1:78179372-78179391 Msa1040720:intron 20.0%
!! ATTATTATGAAAAAAAGAGG+GGG - chr7_1:78179428-78179447 None:intergenic 20.0%
!! TCATTATACTTACATTCATT+TGG + chr7_1:78179607-78179626 Msa1040720:CDS 20.0%
!! ACTAAATCTAAAAACTGTAA+TGG + chr7_1:78180072-78180091 Msa1040720:three_prime_UTR 20.0%
!! GTAAACTCATTATAAAAAGA+AGG - chr7_1:78180230-78180249 None:intergenic 20.0%
!!! TGAGTTGAGTTGAATTTAAA+AGG - chr7_1:78171370-78171389 None:intergenic 25.0%
!!! TGAGTTGAGTTGAATTTAAA+AGG - chr7_1:78171370-78171389 None:intergenic 25.0%
! TTAATTAACTATGACTGTGT+CGG + chr7_1:78171536-78171555 Msa1040720:five_prime_UTR 25.0%
!! TTGAGATTCATCTTATTTCA+TGG + chr7_1:78172288-78172307 Msa1040720:intron 25.0%
!! TTTTTCTCCTCCTTTTATTA+TGG - chr7_1:78172396-78172415 None:intergenic 25.0%
! AATAAATATACATCTTGTCG+AGG + chr7_1:78172718-78172737 Msa1040720:intron 25.0%
! AAGACATATTTATTACAAGG+AGG + chr7_1:78172750-78172769 Msa1040720:intron 25.0%
! AAACTTGAGGAAAATTATGT+TGG - chr7_1:78172866-78172885 None:intergenic 25.0%
! TTAAATGTGATAGAAACTTG+AGG - chr7_1:78172879-78172898 None:intergenic 25.0%
! CACATTTAATGATGAAGAAT+TGG + chr7_1:78172890-78172909 Msa1040720:intron 25.0%
! GTTTGTTCAATTAATCTCTA+TGG + chr7_1:78172918-78172937 Msa1040720:intron 25.0%
! TTAATCTCTATGGAAGATAA+TGG + chr7_1:78172928-78172947 Msa1040720:intron 25.0%
! TAATCTCTATGGAAGATAAT+GGG + chr7_1:78172929-78172948 Msa1040720:intron 25.0%
!! ACTCAATTTTTGTGTGTATA+AGG + chr7_1:78173090-78173109 Msa1040720:intron 25.0%
!!! CTTTGAAGTTCTTAAATGTT+AGG - chr7_1:78173281-78173300 None:intergenic 25.0%
! CTAACATTTAAGAACTTCAA+AGG + chr7_1:78173279-78173298 Msa1040720:intron 25.0%
!!! TAAAAACCCAATAGGTTTTT+TGG + chr7_1:78173516-78173535 Msa1040720:intron 25.0%
!!! TTGATCAACTGATTTGAAAA+TGG + chr7_1:78173702-78173721 Msa1040720:intron 25.0%
! AGTGTAATTAACAACTGTAA+TGG + chr7_1:78173757-78173776 Msa1040720:intron 25.0%
!! TGATTTTCTGTAGAAATTCT+GGG + chr7_1:78174666-78174685 Msa1040720:intron 25.0%
! AAGAATATCTGATATTCTGA+TGG + chr7_1:78174832-78174851 Msa1040720:intron 25.0%
! AGAATATCTGATATTCTGAT+GGG + chr7_1:78174833-78174852 Msa1040720:intron 25.0%
! ACCGCTAATGTAAAAAATAT+TGG + chr7_1:78175046-78175065 Msa1040720:intron 25.0%
! GATAGTAGATGGATAAATAA+AGG - chr7_1:78175205-78175224 None:intergenic 25.0%
! TAGAAATGTTGATCAATTAG+GGG - chr7_1:78175269-78175288 None:intergenic 25.0%
! ATATGTAACTCTTGTATCTA+TGG + chr7_1:78175294-78175313 Msa1040720:intron 25.0%
! GAAGCAAGAGATAAAAAAAT+TGG + chr7_1:78175323-78175342 Msa1040720:intron 25.0%
!! AAAACAATTATTTAGGACAC+CGG + chr7_1:78175436-78175455 Msa1040720:intron 25.0%
! CAATTTCATACATGAAAACA+AGG - chr7_1:78175806-78175825 None:intergenic 25.0%
! ATATATCCTTCAATATCAGT+TGG - chr7_1:78176130-78176149 None:intergenic 25.0%
! CTGATATTGAAGGATATATA+CGG + chr7_1:78176131-78176150 Msa1040720:CDS 25.0%
! TATCTTGCTAAGTTTCTATT+TGG + chr7_1:78176432-78176451 Msa1040720:intron 25.0%
!!! TGCATATTAACTTGTTTTGA+TGG + chr7_1:78176612-78176631 Msa1040720:intron 25.0%
!!! TATATTTTTATGACTAGGCT+AGG + chr7_1:78176723-78176742 Msa1040720:intron 25.0%
! ACCTGGAATAATAAAAACAA+GGG - chr7_1:78177038-78177057 None:intergenic 25.0%
! AACCTGGAATAATAAAAACA+AGG - chr7_1:78177039-78177058 None:intergenic 25.0%
!! TAGTATTTCCCATTTTCAAT+AGG - chr7_1:78177530-78177549 None:intergenic 25.0%
!! TGAGGATAGAAATTTTGTAT+TGG + chr7_1:78177581-78177600 Msa1040720:intron 25.0%
!!! TAGTTTCGTATTTTTAGCAT+TGG + chr7_1:78177739-78177758 Msa1040720:intron 25.0%
! GAGAGAGTAATAAATAGTTA+AGG + chr7_1:78177982-78178001 Msa1040720:intron 25.0%
! AAGTAACATTAATGTTGCAT+TGG + chr7_1:78178017-78178036 Msa1040720:intron 25.0%
! TTGTAAAGCGACATATAATT+TGG + chr7_1:78178042-78178061 Msa1040720:intron 25.0%
! TGTAAAGCGACATATAATTT+GGG + chr7_1:78178043-78178062 Msa1040720:intron 25.0%
! AAGGATATTATGACACAAAA+GGG + chr7_1:78178280-78178299 Msa1040720:intron 25.0%
!! AAGTCTGAAATGATAAATAC+CGG + chr7_1:78178371-78178390 Msa1040720:intron 25.0%
!!! TATAAGGAGGCATTTAATTA+TGG - chr7_1:78178421-78178440 None:intergenic 25.0%
! TTTATAAGGATGCATGTAAA+TGG - chr7_1:78178460-78178479 None:intergenic 25.0%
! ATGGATTTCATTCATGAAAT+GGG + chr7_1:78178725-78178744 Msa1040720:CDS 25.0%
!!! TAGATTTTATTTGCTTTCTG+TGG - chr7_1:78178760-78178779 None:intergenic 25.0%
! ACAGAAAGCAAATAAAATCT+AGG + chr7_1:78178759-78178778 Msa1040720:CDS 25.0%
! CAGAAAGCAAATAAAATCTA+GGG + chr7_1:78178760-78178779 Msa1040720:CDS 25.0%
!! AGATTTTCTTGTAAGTCATT+TGG + chr7_1:78179243-78179262 Msa1040720:intron 25.0%
! ACAGTTATAATATAGAACCT+AGG - chr7_1:78179315-78179334 None:intergenic 25.0%
! AATAGTTTGATTCAAGAAGT+GGG - chr7_1:78179360-78179379 None:intergenic 25.0%
! TAATAGTTTGATTCAAGAAG+TGG - chr7_1:78179361-78179380 None:intergenic 25.0%
! TTTAGCATTTGACAATAACT+TGG + chr7_1:78179496-78179515 Msa1040720:intron 25.0%
! TTAGCATTTGACAATAACTT+GGG + chr7_1:78179497-78179516 Msa1040720:intron 25.0%
!! AATTTGACGGACAATTTAAT+AGG + chr7_1:78180006-78180025 Msa1040720:three_prime_UTR 25.0%
! TATTATGCTATTGTACAACA+AGG - chr7_1:78180188-78180207 None:intergenic 25.0%
! TAATGAGTTTACTTATCATG+CGG + chr7_1:78180238-78180257 Msa1040720:three_prime_UTR 25.0%
AAGAAAAAGGGCTATGTTAA+TGG - chr7_1:78171205-78171224 None:intergenic 30.0%
GGTTAATTAAGAAGAGTGAA+TGG - chr7_1:78171349-78171368 None:intergenic 30.0%
TGTACTCTTACTTGATCTAT+AGG + chr7_1:78171559-78171578 Msa1040720:five_prime_UTR 30.0%
GTTTGTGAATTCTGTGATTA+TGG + chr7_1:78171629-78171648 Msa1040720:exon 30.0%
! ATGGAAGCTTTTCAATTGTA+CGG + chr7_1:78171648-78171667 Msa1040720:CDS 30.0%
TTTCAATTGTACGGTAATGA+TGG + chr7_1:78171657-78171676 Msa1040720:CDS 30.0%
ATGGTAATTCCTCTGATTTA+AGG + chr7_1:78171676-78171695 Msa1040720:CDS 30.0%
TGGTAATTCCTCTGATTTAA+GGG + chr7_1:78171677-78171696 Msa1040720:CDS 30.0%
TGGGGAAAAAATCAAAAGAA+TGG + chr7_1:78171703-78171722 Msa1040720:CDS 30.0%
GGGGAAAAAATCAAAAGAAT+GGG + chr7_1:78171704-78171723 Msa1040720:CDS 30.0%
AAGAATGGGATTTGAATAGT+TGG + chr7_1:78171718-78171737 Msa1040720:CDS 30.0%
GGATTTGAATAGTTGGAAAT+GGG + chr7_1:78171725-78171744 Msa1040720:CDS 30.0%
! ACTAGGTTTAGGTTTGAATA+AGG + chr7_1:78171938-78171957 Msa1040720:CDS 30.0%
GGTAATCTTAGTTTAAACCT+TGG + chr7_1:78171966-78171985 Msa1040720:CDS 30.0%
AATCTTAGTTTAAACCTTGG+TGG + chr7_1:78171969-78171988 Msa1040720:CDS 30.0%
AGTTTGTGAGATACATTCAA+AGG + chr7_1:78172133-78172152 Msa1040720:CDS 30.0%
!! CTTTGAAATGATGAAAAGCT+TGG + chr7_1:78172606-78172625 Msa1040720:intron 30.0%
AATGATGAAAAGCTTGGTAT+TGG + chr7_1:78172612-78172631 Msa1040720:intron 30.0%
GGGAAGACATATTTATTACA+AGG + chr7_1:78172747-78172766 Msa1040720:intron 30.0%
! TTTTGTTAGAGTCTATCCAT+TGG + chr7_1:78173386-78173405 Msa1040720:intron 30.0%
TTTGTTAGAGTCTATCCATT+GGG + chr7_1:78173387-78173406 Msa1040720:intron 30.0%
TTTAAAAAGGTAGCGATCTT+GGG + chr7_1:78173831-78173850 Msa1040720:intron 30.0%
! TTTTATGAATTACAGCTGAC+AGG + chr7_1:78173965-78173984 Msa1040720:intron 30.0%
! ATCTGCTTACTCATCTTTTA+AGG + chr7_1:78174010-78174029 Msa1040720:CDS 30.0%
CTGAGAATCTGTTAAAAGAA+GGG + chr7_1:78174094-78174113 Msa1040720:CDS 30.0%
TTAAAAGAAGGGTCTTTATC+TGG + chr7_1:78174105-78174124 Msa1040720:CDS 30.0%
TAAAAGAAGGGTCTTTATCT+GGG + chr7_1:78174106-78174125 Msa1040720:CDS 30.0%
CAGATCAAAATCATTCATCT+TGG - chr7_1:78174352-78174371 None:intergenic 30.0%
TATCTATTGCAGCATTATTC+TGG + chr7_1:78174572-78174591 Msa1040720:intron 30.0%
! GTGATTTTCTGTAGAAATTC+TGG + chr7_1:78174665-78174684 Msa1040720:intron 30.0%
ATTGTGGTTCTTAGAATTTG+TGG + chr7_1:78174717-78174736 Msa1040720:intron 30.0%
GAGGTCTTTAGTTAGTATAA+GGG + chr7_1:78174945-78174964 Msa1040720:intron 30.0%
AGGTCTTTAGTTAGTATAAG+GGG + chr7_1:78174946-78174965 Msa1040720:intron 30.0%
TTTAGTTAGTATAAGGGGAT+GGG + chr7_1:78174951-78174970 Msa1040720:intron 30.0%
! AATTTAAACCAGGATTGGTA+AGG - chr7_1:78175619-78175638 None:intergenic 30.0%
TTAAATTGCATGCCCATTAA+TGG + chr7_1:78175632-78175651 Msa1040720:intron 30.0%
GAAAATATTCATCAGACTTG+AGG + chr7_1:78175668-78175687 Msa1040720:intron 30.0%
!! CCATTTATTTCTGAAACCTA+AGG - chr7_1:78175731-78175750 None:intergenic 30.0%
CCTTAGGTTTCAGAAATAAA+TGG + chr7_1:78175728-78175747 Msa1040720:intron 30.0%
TCATGTATGAAATTGCATTC+TGG + chr7_1:78175811-78175830 Msa1040720:intron 30.0%
!!! CGGATTGTTTTTAAACTCTT+CGG + chr7_1:78175953-78175972 Msa1040720:CDS 30.0%
! GTTTTTAAACTCTTCGGTAA+AGG + chr7_1:78175959-78175978 Msa1040720:CDS 30.0%
! AAGAACAAATAAGCCTTGTA+AGG - chr7_1:78176287-78176306 None:intergenic 30.0%
! ATGTCTCAGATGATGATTTT+TGG + chr7_1:78176353-78176372 Msa1040720:CDS 30.0%
CAAGATACCATTGAAAATGA+AGG - chr7_1:78176419-78176438 None:intergenic 30.0%
CTGAGCAAAATAATGTTTGA+TGG - chr7_1:78176516-78176535 None:intergenic 30.0%
ATTATTACTCCTGAAAGGAA+GGG - chr7_1:78176797-78176816 None:intergenic 30.0%
AATTATTACTCCTGAAAGGA+AGG - chr7_1:78176798-78176817 None:intergenic 30.0%
CCATAATTATTACTCCTGAA+AGG - chr7_1:78176802-78176821 None:intergenic 30.0%
CCTTTCAGGAGTAATAATTA+TGG + chr7_1:78176799-78176818 Msa1040720:CDS 30.0%
AACTAGTAAAGAATACCTTG+TGG - chr7_1:78176911-78176930 None:intergenic 30.0%
CAATGTTATTGCATTTCACA+GGG - chr7_1:78176935-78176954 None:intergenic 30.0%
TCTCTTTGATATACACATGT+AGG + chr7_1:78176986-78177005 Msa1040720:intron 30.0%
!!! ACCCTTGTTTTTATTATTCC+AGG + chr7_1:78177034-78177053 Msa1040720:intron 30.0%
!! TGCTTTAGAAGGGAATTATT+TGG + chr7_1:78177065-78177084 Msa1040720:CDS 30.0%
! GTATGCGTAATCTTTTCTTT+TGG + chr7_1:78177429-78177448 Msa1040720:intron 30.0%
! CGTAATCTTTTCTTTTGGAT+GGG + chr7_1:78177434-78177453 Msa1040720:intron 30.0%
! GTAATCTTTTCTTTTGGATG+GGG + chr7_1:78177435-78177454 Msa1040720:intron 30.0%
GATACTAACATATACAGTAC+TGG - chr7_1:78177467-78177486 None:intergenic 30.0%
GAATTGTAATCTCAATGTAC+TGG + chr7_1:78177503-78177522 Msa1040720:intron 30.0%
AAATACTAACATGTACTCTC+AGG + chr7_1:78177542-78177561 Msa1040720:intron 30.0%
AATACTAACATGTACTCTCA+GGG + chr7_1:78177543-78177562 Msa1040720:intron 30.0%
! CGAAAATGTATGTTTTCAGT+GGG - chr7_1:78177713-78177732 None:intergenic 30.0%
! CCACTGAAAACATACATTTT+CGG + chr7_1:78177711-78177730 Msa1040720:intron 30.0%
GATTATTAATAGTGCGATAC+TGG + chr7_1:78178160-78178179 Msa1040720:intron 30.0%
AACTTCAACAAAGATTGATC+CGG - chr7_1:78178210-78178229 None:intergenic 30.0%
AAGAAGTAGGAATAGTATGT+TGG + chr7_1:78178249-78178268 Msa1040720:intron 30.0%
GAAGGATATTATGACACAAA+AGG + chr7_1:78178279-78178298 Msa1040720:intron 30.0%
!!! TTTTTTTCCTTTCATAGTCG+TGG + chr7_1:78178595-78178614 Msa1040720:CDS 30.0%
ATACTTATCCAGATGTTGAA+GGG + chr7_1:78178672-78178691 Msa1040720:CDS 30.0%
CATTTCATGAATGAAATCCA+TGG - chr7_1:78178726-78178745 None:intergenic 30.0%
CATGGATTTCATTCATGAAA+TGG + chr7_1:78178724-78178743 Msa1040720:CDS 30.0%
ATTTCATTCATGAAATGGGT+TGG + chr7_1:78178729-78178748 Msa1040720:CDS 30.0%
AAAGCAAATAAAATCTAGGG+TGG + chr7_1:78178763-78178782 Msa1040720:CDS 30.0%
AGAAAAATTCTTACCATGCA+AGG - chr7_1:78179199-78179218 None:intergenic 30.0%
TATCTTAAACTGACAAGAGA+GGG + chr7_1:78179218-78179237 Msa1040720:intron 30.0%
!!! TAACTTGGGCATTTTAATTC+AGG + chr7_1:78179511-78179530 Msa1040720:intron 30.0%
AAGAAAATCAACAAGAGTCA+AGG + chr7_1:78179635-78179654 Msa1040720:CDS 30.0%
TGGAAATGCTGAAGTTAAAA+AGG + chr7_1:78179748-78179767 Msa1040720:CDS 30.0%
AATGCTGAAGTTAAAAAGGT+TGG + chr7_1:78179752-78179771 Msa1040720:CDS 30.0%
TGAAGTTAAAAAGGTTGGAA+AGG + chr7_1:78179757-78179776 Msa1040720:CDS 30.0%
!! AATTTATGTTGTAGCCTTGT+AGG - chr7_1:78179990-78180009 None:intergenic 30.0%
AGGCTACAACATAAATTTGA+CGG + chr7_1:78179993-78180012 Msa1040720:three_prime_UTR 30.0%
AAAGGGCTATGTTAATGGAA+GGG - chr7_1:78171200-78171219 None:intergenic 35.0%
AAAAGGGCTATGTTAATGGA+AGG - chr7_1:78171201-78171220 None:intergenic 35.0%
TCTTTGCGTGACAAGAAAAA+GGG - chr7_1:78171217-78171236 None:intergenic 35.0%
TTCTTTGCGTGACAAGAAAA+AGG - chr7_1:78171218-78171237 None:intergenic 35.0%
AAATGATGTGTGTGTACTGA+TGG - chr7_1:78171276-78171295 None:intergenic 35.0%
TGAATGGATCGAGTGAAATT+GGG - chr7_1:78171333-78171352 None:intergenic 35.0%
GGGATTTGAATAGTTGGAAA+TGG + chr7_1:78171724-78171743 Msa1040720:CDS 35.0%
CTTATTGTGGAAGATGAACT+AGG + chr7_1:78171921-78171940 Msa1040720:CDS 35.0%
! GGTTTAGGTTTGAATAAGGA+AGG + chr7_1:78171942-78171961 Msa1040720:CDS 35.0%
TTAGGTTTGAATAAGGAAGG+TGG + chr7_1:78171945-78171964 Msa1040720:CDS 35.0%
CTACATGGGAAGGAAATAAT+GGG + chr7_1:78172003-78172022 Msa1040720:CDS 35.0%
!! TTCTAGTAGAGCATTTTGTC+AGG + chr7_1:78172055-78172074 Msa1040720:CDS 35.0%
TCTCACAAACTTTATGACGT+CGG - chr7_1:78172124-78172143 None:intergenic 35.0%
GATACATTCAAAGGCTAGTA+AGG + chr7_1:78172142-78172161 Msa1040720:CDS 35.0%
GAACTAACCTACTACATTGT+TGG - chr7_1:78172199-78172218 None:intergenic 35.0%
AATCAAGATGCTGTTCCTAA+TGG + chr7_1:78172418-78172437 Msa1040720:CDS 35.0%
TTAGTGTAATCCATGTATGC+AGG + chr7_1:78172527-78172546 Msa1040720:intron 35.0%
TAGTGTAATCCATGTATGCA+GGG + chr7_1:78172528-78172547 Msa1040720:intron 35.0%
TAAGATACCAACTGACAACT+AGG - chr7_1:78172554-78172573 None:intergenic 35.0%
ATACATCTTGTCGAGGATAT+AGG + chr7_1:78172725-78172744 Msa1040720:intron 35.0%
TACATCTTGTCGAGGATATA+GGG + chr7_1:78172726-78172745 Msa1040720:intron 35.0%
! TGGTCTTACATGTCTATTTC+GGG - chr7_1:78172798-78172817 None:intergenic 35.0%
!! CTGGTCTTACATGTCTATTT+CGG - chr7_1:78172799-78172818 None:intergenic 35.0%
GAAAATTCCAGATCAAGAAC+TGG - chr7_1:78172818-78172837 None:intergenic 35.0%
ATCCAAATCCAACTCAGTTT+AGG + chr7_1:78173184-78173203 Msa1040720:intron 35.0%
!! CTTTAAAGCCTAAACTGAGT+TGG - chr7_1:78173195-78173214 None:intergenic 35.0%
! CAACTCAGTTTAGGCTTTAA+AGG + chr7_1:78173193-78173212 Msa1040720:intron 35.0%
!! CAGTTTTGTAAGGATGAATC+AGG + chr7_1:78173343-78173362 Msa1040720:intron 35.0%
! CCTATTGGGTTTTTATATCG+TGG - chr7_1:78173511-78173530 None:intergenic 35.0%
CCACGATATAAAAACCCAAT+AGG + chr7_1:78173508-78173527 Msa1040720:intron 35.0%
CTAGCACCAAAAAACCTATT+GGG - chr7_1:78173525-78173544 None:intergenic 35.0%
ACTAGCACCAAAAAACCTAT+TGG - chr7_1:78173526-78173545 None:intergenic 35.0%
TACTGACAAATGCTTCTGAA+GGG - chr7_1:78173601-78173620 None:intergenic 35.0%
GTTTAAAAAGGTAGCGATCT+TGG + chr7_1:78173830-78173849 Msa1040720:intron 35.0%
! GGAACTTGTCTAACCTTTTA+CGG + chr7_1:78174067-78174086 Msa1040720:CDS 35.0%
! GAACTTGTCTAACCTTTTAC+GGG + chr7_1:78174068-78174087 Msa1040720:CDS 35.0%
! CCTTCTTTTAACAGATTCTC+AGG - chr7_1:78174096-78174115 None:intergenic 35.0%
CCTGAGAATCTGTTAAAAGA+AGG + chr7_1:78174093-78174112 Msa1040720:CDS 35.0%
GTTTCTACTTTAGTTACCGA+TGG + chr7_1:78174141-78174160 Msa1040720:CDS 35.0%
TGATTCTGTACTGTAACAGT+TGG - chr7_1:78174180-78174199 None:intergenic 35.0%
!! ATCTATATTGACTCAGACGA+TGG + chr7_1:78174378-78174397 Msa1040720:CDS 35.0%
TCTGAATTTCCACTTGTTTG+AGG - chr7_1:78174501-78174520 None:intergenic 35.0%
AAATCACAAAATCCCAGTCA+TGG - chr7_1:78174652-78174671 None:intergenic 35.0%
!! TGTCTTAATTTGTCATGCTG+AGG + chr7_1:78174743-78174762 Msa1040720:intron 35.0%
GGAGGTCTTTAGTTAGTATA+AGG + chr7_1:78174944-78174963 Msa1040720:intron 35.0%
CTTTAGTTAGTATAAGGGGA+TGG + chr7_1:78174950-78174969 Msa1040720:intron 35.0%
TTAGTTAGTATAAGGGGATG+GGG + chr7_1:78174952-78174971 Msa1040720:intron 35.0%
TATGAGTGTTATACAGGTGT+CGG + chr7_1:78175381-78175400 Msa1040720:intron 35.0%
! ATGTACTGTTCAGTTAGTCT+CGG - chr7_1:78175549-78175568 None:intergenic 35.0%
CATGCAATTTAAACCAGGAT+TGG - chr7_1:78175624-78175643 None:intergenic 35.0%
! TTCCATGATGGAATTTCCTT+AGG + chr7_1:78175712-78175731 Msa1040720:intron 35.0%
AACCTAAGGAAATTCCATCA+TGG - chr7_1:78175717-78175736 None:intergenic 35.0%
! GTGTCATTGAAGCTAACATT+AGG - chr7_1:78175845-78175864 None:intergenic 35.0%
TGTTGAATCATGACAATCTC+AGG - chr7_1:78175894-78175913 None:intergenic 35.0%
TTCAATATCAGTTGGACTGT+GGG - chr7_1:78176122-78176141 None:intergenic 35.0%
ATAGTCAAAACAACACAACC+AGG - chr7_1:78176157-78176176 None:intergenic 35.0%
TTTGACTATTTATCTGCGTC+AGG + chr7_1:78176168-78176187 Msa1040720:CDS 35.0%
!! GGATACTTTTTGACCTTACA+AGG + chr7_1:78176271-78176290 Msa1040720:intron 35.0%
ATCTGACTTCCAGTTTGAAT+AGG + chr7_1:78176323-78176342 Msa1040720:CDS 35.0%
!! GATGATGATTTTTGGAGAAC+TGG + chr7_1:78176361-78176380 Msa1040720:CDS 35.0%
!! ATGATTTTTGGAGAACTGGA+TGG + chr7_1:78176365-78176384 Msa1040720:CDS 35.0%
!! TGATTTTTGGAGAACTGGAT+GGG + chr7_1:78176366-78176385 Msa1040720:CDS 35.0%
TTGCTATCTGTCATGAAAAC+AGG + chr7_1:78176458-78176477 Msa1040720:intron 35.0%
AACAAGTTAATATGCAGCAG+TGG - chr7_1:78176608-78176627 None:intergenic 35.0%
TTATTACTCCTGAAAGGAAG+GGG - chr7_1:78176796-78176815 None:intergenic 35.0%
!! TTTGATGATGGTACAGCAAT+TGG - chr7_1:78176844-78176863 None:intergenic 35.0%
AATTGAGCTGTCTTTGATGA+TGG - chr7_1:78176856-78176875 None:intergenic 35.0%
! ACAGCTCAATTTTCTGTGAA+GGG + chr7_1:78176865-78176884 Msa1040720:CDS 35.0%
GCAATGTTATTGCATTTCAC+AGG - chr7_1:78176936-78176955 None:intergenic 35.0%
!! TTCTAAAGCACACAATAACC+TGG - chr7_1:78177055-78177074 None:intergenic 35.0%
! AGGTTATTGTGTGCTTTAGA+AGG + chr7_1:78177054-78177073 Msa1040720:intron 35.0%
!! GGTTATTGTGTGCTTTAGAA+GGG + chr7_1:78177055-78177074 Msa1040720:intron 35.0%
TGAAGATACTCATGAGCTTA+TGG + chr7_1:78177092-78177111 Msa1040720:CDS 35.0%
TACTCTTCGCTACAATGTTT+AGG - chr7_1:78177313-78177332 None:intergenic 35.0%
! GCGTAATCTTTTCTTTTGGA+TGG + chr7_1:78177433-78177452 Msa1040720:intron 35.0%
TGTACTGGACCTATTGAAAA+TGG + chr7_1:78177518-78177537 Msa1040720:intron 35.0%
GTACTGGACCTATTGAAAAT+GGG + chr7_1:78177519-78177538 Msa1040720:intron 35.0%
ATTCCTTAACATGTGCTCTT+AGG + chr7_1:78177671-78177690 Msa1040720:intron 35.0%
TTCCTTAACATGTGCTCTTA+GGG + chr7_1:78177672-78177691 Msa1040720:intron 35.0%
! CCGAAAATGTATGTTTTCAG+TGG - chr7_1:78177714-78177733 None:intergenic 35.0%
! GACTTTGAGGATGATTGTAT+TGG + chr7_1:78177789-78177808 Msa1040720:intron 35.0%
! AGGATGATTGTATTGGTGTT+TGG + chr7_1:78177796-78177815 Msa1040720:intron 35.0%
AAACGTCATACAATTTGGGA+CGG - chr7_1:78177839-78177858 None:intergenic 35.0%
! TCCCAAATTGTATGACGTTT+TGG + chr7_1:78177839-78177858 Msa1040720:intron 35.0%
CCCAAAACGTCATACAATTT+GGG - chr7_1:78177843-78177862 None:intergenic 35.0%
! CCCAAATTGTATGACGTTTT+GGG + chr7_1:78177840-78177859 Msa1040720:intron 35.0%
!! CAAATTGTATGTCGCTTTAG+GGG - chr7_1:78178080-78178099 None:intergenic 35.0%
!! CCAAATTGTATGTCGCTTTA+GGG - chr7_1:78178081-78178100 None:intergenic 35.0%
CCTAAAGCGACATACAATTT+GGG + chr7_1:78178079-78178098 Msa1040720:intron 35.0%
TAACCATTGTGTTAGCAAAC+CGG + chr7_1:78178188-78178207 Msa1040720:intron 35.0%
GCATACTTAGTTGAAGAAGT+AGG + chr7_1:78178236-78178255 Msa1040720:intron 35.0%
AAGTAGGAATAGTATGTTGG+TGG + chr7_1:78178252-78178271 Msa1040720:intron 35.0%
!! TAGTATGTTGGTGGTTAAGA+AGG + chr7_1:78178261-78178280 Msa1040720:intron 35.0%
CAAGAACAGTGAATAAGTGT+TGG - chr7_1:78178397-78178416 None:intergenic 35.0%
CAGATACATAACATTGATGC+AGG - chr7_1:78178514-78178533 None:intergenic 35.0%
GATACTTATCCAGATGTTGA+AGG + chr7_1:78178671-78178690 Msa1040720:CDS 35.0%
TACTTATCCAGATGTTGAAG+GGG + chr7_1:78178673-78178692 Msa1040720:CDS 35.0%
TCAAGCAAAAAATCAAGCCA+TGG + chr7_1:78178706-78178725 Msa1040720:CDS 35.0%
GGTTCGTTTGAATTCTAGTA+TGG + chr7_1:78178784-78178803 Msa1040720:CDS 35.0%
! TTCCATTAGATCGATTCAAG+TGG + chr7_1:78178813-78178832 Msa1040720:CDS 35.0%
TATCTTGCACTTTCAGAGTT+GGG + chr7_1:78178938-78178957 Msa1040720:CDS 35.0%
TTTGACTAATGATCCTTGCA+TGG + chr7_1:78179183-78179202 Msa1040720:CDS 35.0%
CTATCTTAAACTGACAAGAG+AGG + chr7_1:78179217-78179236 Msa1040720:intron 35.0%
TAGAACCTAGGCATATAACA+GGG - chr7_1:78179303-78179322 None:intergenic 35.0%
ATAGAACCTAGGCATATAAC+AGG - chr7_1:78179304-78179323 None:intergenic 35.0%
!!! TTGGGCATTTTAATTCAGGT+GGG + chr7_1:78179515-78179534 Msa1040720:intron 35.0%
AAAATCAACAAGAGTCAAGG+AGG + chr7_1:78179638-78179657 Msa1040720:CDS 35.0%
AAATCAACAAGAGTCAAGGA+GGG + chr7_1:78179639-78179658 Msa1040720:CDS 35.0%
TGCACAATTCATCTTTCTTC+TGG - chr7_1:78179715-78179734 None:intergenic 35.0%
TTCAGCATTTCCAATCTCAA+AGG - chr7_1:78179741-78179760 None:intergenic 35.0%
CGGAATATATACAGAACTTC+CGG - chr7_1:78179917-78179936 None:intergenic 35.0%
TGTATATATTCCGACCTTTC+AGG + chr7_1:78179924-78179943 Msa1040720:CDS 35.0%
AATAGGATGCGTTCATATAC+TGG + chr7_1:78180023-78180042 Msa1040720:three_prime_UTR 35.0%
! GTTCATATACTGGCTAAACT+GGG + chr7_1:78180033-78180052 Msa1040720:three_prime_UTR 35.0%
GCTATGTTAATGGAAGGGTA+TGG - chr7_1:78171195-78171214 None:intergenic 40.0%
GTGAATGGATCGAGTGAAAT+TGG - chr7_1:78171334-78171353 None:intergenic 40.0%
TTCCTCTGATTTAAGGGCTA+TGG + chr7_1:78171683-78171702 Msa1040720:CDS 40.0%
TCCTCTGATTTAAGGGCTAT+GGG + chr7_1:78171684-78171703 Msa1040720:CDS 40.0%
! AGCTACTAGTAAGTTGACTC+CGG + chr7_1:78171764-78171783 Msa1040720:CDS 40.0%
CAACCGGAATAGGCAAAAAT+TGG - chr7_1:78171803-78171822 None:intergenic 40.0%
! CAATTTTTGCCTATTCCGGT+TGG + chr7_1:78171801-78171820 Msa1040720:CDS 40.0%
TGCTCAGAACAGTTAGATCT+TGG + chr7_1:78171861-78171880 Msa1040720:CDS 40.0%
GCTCAGAACAGTTAGATCTT+GGG + chr7_1:78171862-78171881 Msa1040720:CDS 40.0%
TCTTGGGATTTGTCAAGTGA+AGG + chr7_1:78171878-78171897 Msa1040720:CDS 40.0%
GTGGAAGATGAACTAGGTTT+AGG + chr7_1:78171927-78171946 Msa1040720:CDS 40.0%
CTTAGTTTAAACCTTGGTGG+TGG + chr7_1:78171972-78171991 Msa1040720:CDS 40.0%
GCTACATGGGAAGGAAATAA+TGG + chr7_1:78172002-78172021 Msa1040720:CDS 40.0%
AAGAAAAGTAGAGTAGCTGG+TGG + chr7_1:78172026-78172045 Msa1040720:CDS 40.0%
!! TAGTAGAGCATTTTGTCAGG+TGG + chr7_1:78172058-78172077 Msa1040720:CDS 40.0%
TTGCTTCAAGAGTTTGACGA+AGG + chr7_1:78172340-78172359 Msa1040720:CDS 40.0%
GTTTGGCAGGCCATAATAAA+AGG + chr7_1:78172383-78172402 Msa1040720:CDS 40.0%
! CTACTAGTCTGATCATCGTT+CGG - chr7_1:78172451-78172470 None:intergenic 40.0%
CTAAGTTAATAGCTGCAGGA+AGG + chr7_1:78172669-78172688 Msa1040720:intron 40.0%
ACATCTTGTCGAGGATATAG+GGG + chr7_1:78172727-78172746 Msa1040720:intron 40.0%
GAGGTTTCATACTTTGACCT+TGG + chr7_1:78172769-78172788 Msa1040720:intron 40.0%
TGTAAGACCAGTTCTTGATC+TGG + chr7_1:78172808-78172827 Msa1040720:intron 40.0%
CACAGTCGACTGTAAATAGT+TGG + chr7_1:78172840-78172859 Msa1040720:intron 40.0%
!! CTCTATGGAAGATAATGGGT+CGG + chr7_1:78172933-78172952 Msa1040720:intron 40.0%
AACATGAGGGAGAAAAGAAG+AGG - chr7_1:78173039-78173058 None:intergenic 40.0%
! CTTCTTTTCTCCCTCATGTT+AGG + chr7_1:78173039-78173058 Msa1040720:intron 40.0%
CTATCTCTCTCCTAACATGA+GGG - chr7_1:78173052-78173071 None:intergenic 40.0%
TCTATCTCTCTCCTAACATG+AGG - chr7_1:78173053-78173072 None:intergenic 40.0%
! AGCCTAAACTGAGTTGGATT+TGG - chr7_1:78173189-78173208 None:intergenic 40.0%
CCTTACAAAACTGACGTGTA+GGG - chr7_1:78173336-78173355 None:intergenic 40.0%
TCCTTACAAAACTGACGTGT+AGG - chr7_1:78173337-78173356 None:intergenic 40.0%
AGTGAGTGGATATAAGTGGT+GGG - chr7_1:78173416-78173435 None:intergenic 40.0%
TAGTGAGTGGATATAAGTGG+TGG - chr7_1:78173417-78173436 None:intergenic 40.0%
GCTTAGTGAGTGGATATAAG+TGG - chr7_1:78173420-78173439 None:intergenic 40.0%
! CATACAAAGCAGGCTTTGTA+AGG - chr7_1:78173479-78173498 None:intergenic 40.0%
! GTACTGACAAATGCTTCTGA+AGG - chr7_1:78173602-78173621 None:intergenic 40.0%
!! AGAAGCATTTGTCAGTACCT+TGG + chr7_1:78173604-78173623 Msa1040720:intron 40.0%
! GAAGCATTTGTCAGTACCTT+GGG + chr7_1:78173605-78173624 Msa1040720:intron 40.0%
AAGCATTTGTCAGTACCTTG+GGG + chr7_1:78173606-78173625 Msa1040720:intron 40.0%
GGGAACAGAGTATGGAATAA+GGG + chr7_1:78173627-78173646 Msa1040720:intron 40.0%
TGAAAATGGCTCAGAAGAGA+CGG + chr7_1:78173716-78173735 Msa1040720:intron 40.0%
ACAACAATGCTCTCAACTAC+TGG - chr7_1:78173880-78173899 None:intergenic 40.0%
ATCCTTCAACTACCTGTCAT+AGG - chr7_1:78173932-78173951 None:intergenic 40.0%
AAAGATGAGTAAGCAGATCC+TGG - chr7_1:78174008-78174027 None:intergenic 40.0%
AGGAGTCTTGCTAATCAGAA+TGG + chr7_1:78174030-78174049 Msa1040720:CDS 40.0%
CTAATCAGAATGGCGAACAA+GGG + chr7_1:78174040-78174059 Msa1040720:CDS 40.0%
TAATCAGAATGGCGAACAAG+GGG + chr7_1:78174041-78174060 Msa1040720:CDS 40.0%
TTTATCTGGGAAGTCTGAGA+TGG + chr7_1:78174119-78174138 Msa1040720:CDS 40.0%
TTAGTTACCGATGGTTCTCA+AGG + chr7_1:78174150-78174169 Msa1040720:CDS 40.0%
TGATGCATTCACATGATGCT+AGG + chr7_1:78174232-78174251 Msa1040720:CDS 40.0%
GATGCATTCACATGATGCTA+GGG + chr7_1:78174233-78174252 Msa1040720:CDS 40.0%
ATGGCATAGAGGACATAGAA+AGG + chr7_1:78174397-78174416 Msa1040720:CDS 40.0%
GAATTTCCACTTGTTTGAGG+TGG - chr7_1:78174498-78174517 None:intergenic 40.0%
AGGACTATGTACATGAGCAT+GGG - chr7_1:78174611-78174630 None:intergenic 40.0%
AAGGACTATGTACATGAGCA+TGG - chr7_1:78174612-78174631 None:intergenic 40.0%
TCTTAGGAAGATCTGACAAG+AGG + chr7_1:78174864-78174883 Msa1040720:intron 40.0%
TAACATACATGTAGCGGTGT+CGG - chr7_1:78175075-78175094 None:intergenic 40.0%
ACTCTTGTATCTATGGTGTG+CGG + chr7_1:78175301-78175320 Msa1040720:intron 40.0%
! TATGGGTGTCATAGAAGTGT+CGG + chr7_1:78175473-78175492 Msa1040720:intron 40.0%
ATGGGCATGCAATTTAAACC+AGG - chr7_1:78175629-78175648 None:intergenic 40.0%
GATGCTGAGAAATTCCATGA+TGG + chr7_1:78175700-78175719 Msa1040720:intron 40.0%
TTCTGCAACCAAAAACAAGC+AGG - chr7_1:78175756-78175775 None:intergenic 40.0%
TGTATCGTAACTGACTATGC+AGG + chr7_1:78175779-78175798 Msa1040720:intron 40.0%
! TTCCACCATTTAGAATCGCA+CGG + chr7_1:78175928-78175947 Msa1040720:intron 40.0%
AGTACAAGAGGAAAATCGCT+TGG - chr7_1:78175986-78176005 None:intergenic 40.0%
TTGGTCTCCAGATTCTTGAT+TGG + chr7_1:78176092-78176111 Msa1040720:intron 40.0%
GGGATAACCAATCAAGAATC+TGG - chr7_1:78176102-78176121 None:intergenic 40.0%
CTTCAATATCAGTTGGACTG+TGG - chr7_1:78176123-78176142 None:intergenic 40.0%
CACAGTCCAACTGATATTGA+AGG + chr7_1:78176121-78176140 Msa1040720:CDS 40.0%
ATTGAAGGATATATACGGCC+TGG + chr7_1:78176136-78176155 Msa1040720:CDS 40.0%
!! GTCCTTCTAAAACTACTAGC+AGG + chr7_1:78176220-78176239 Msa1040720:intron 40.0%
!!! GACCTGCTAGTAGTTTTAGA+AGG - chr7_1:78176225-78176244 None:intergenic 40.0%
AGGTCTGTGTGTGGTTATTT+CGG + chr7_1:78176240-78176259 Msa1040720:intron 40.0%
! TGTGGTTATTTCGGCAATCA+GGG + chr7_1:78176249-78176268 Msa1040720:intron 40.0%
TTCCAGTTTGAATAGGCTTC+TGG + chr7_1:78176330-78176349 Msa1040720:CDS 40.0%
ATCCAGAAGCCTATTCAAAC+TGG - chr7_1:78176335-78176354 None:intergenic 40.0%
! CAGATGGCCTTCATTTTCAA+TGG + chr7_1:78176409-78176428 Msa1040720:CDS 40.0%
TCTGTCATGAAAACAGGAGT+TGG + chr7_1:78176464-78176483 Msa1040720:intron 40.0%
AGGTTAAGTTATCTGCATCG+AGG + chr7_1:78176558-78176577 Msa1040720:intron 40.0%
! GACAGCTCAATTTTCTGTGA+AGG + chr7_1:78176864-78176883 Msa1040720:CDS 40.0%
AGTAAAGAATACCTTGTGGC+AGG - chr7_1:78176907-78176926 None:intergenic 40.0%
CAGGGACAGAACATGAAAAT+TGG - chr7_1:78177155-78177174 None:intergenic 40.0%
! TGTGCCTTGTCTTTGGAAAA+GGG + chr7_1:78177274-78177293 Msa1040720:intron 40.0%
! CTTTCCCTTTTCCAAAGACA+AGG - chr7_1:78177281-78177300 None:intergenic 40.0%
TCTTCGCTACAATGTTTAGG+CGG - chr7_1:78177310-78177329 None:intergenic 40.0%
AACAGAACCTCGTTACGTAA+TGG + chr7_1:78177386-78177405 Msa1040720:intron 40.0%
CATTGGAATAAGATCCTGAC+TGG + chr7_1:78177756-78177775 Msa1040720:intron 40.0%
AATAAGATCCTGACTGGAGT+TGG + chr7_1:78177762-78177781 Msa1040720:intron 40.0%
!!! TGGAGTTGGTTTTGACTTTG+AGG + chr7_1:78177776-78177795 Msa1040720:intron 40.0%
GCCCAAAACGTCATACAATT+TGG - chr7_1:78177844-78177863 None:intergenic 40.0%
CCCTAAAGCGACATACAATT+TGG + chr7_1:78178078-78178097 Msa1040720:intron 40.0%
!! CCCAAATTGTATGTCGCTTT+AGG - chr7_1:78178082-78178101 None:intergenic 40.0%
AAGCGACATACAATTTGGGA+TGG + chr7_1:78178083-78178102 Msa1040720:intron 40.0%
! GACATACAATTTGGGATGGA+GGG + chr7_1:78178087-78178106 Msa1040720:intron 40.0%
!! AACAGTGAATAAGTGTTGGC+CGG - chr7_1:78178393-78178412 None:intergenic 40.0%
! TTTTCCTTTCATAGTCGTGG+AGG + chr7_1:78178598-78178617 Msa1040720:CDS 40.0%
GTATCACTTGATTCCAGTAG+AGG - chr7_1:78178656-78178675 None:intergenic 40.0%
AGCCACTTGAATCGATCTAA+TGG - chr7_1:78178818-78178837 None:intergenic 40.0%
CTATTGAACCTCATGCTTGA+TGG + chr7_1:78178884-78178903 Msa1040720:CDS 40.0%
! CTCTGAAAGTGCAAGATACA+GGG - chr7_1:78178936-78178955 None:intergenic 40.0%
! ACTCTGAAAGTGCAAGATAC+AGG - chr7_1:78178937-78178956 None:intergenic 40.0%
GTATCTTGCACTTTCAGAGT+TGG + chr7_1:78178937-78178956 Msa1040720:CDS 40.0%
TAAACTAGGACCTGAAGACA+AGG + chr7_1:78179042-78179061 Msa1040720:CDS 40.0%
TTGTTTAGACCTGATGCTGT+CGG + chr7_1:78179094-78179113 Msa1040720:CDS 40.0%
TTGAACCCTGTTATATGCCT+AGG + chr7_1:78179295-78179314 Msa1040720:intron 40.0%
GTTTGATTCAAGAAGTGGGA+AGG - chr7_1:78179356-78179375 None:intergenic 40.0%
AAAAGAGGGGGCTGTAATAT+GGG - chr7_1:78179416-78179435 None:intergenic 40.0%
AAAAAGAGGGGGCTGTAATA+TGG - chr7_1:78179417-78179436 None:intergenic 40.0%
!!! CTTGGGCATTTTAATTCAGG+TGG + chr7_1:78179514-78179533 Msa1040720:intron 40.0%
AATCAACAAGAGTCAAGGAG+GGG + chr7_1:78179640-78179659 Msa1040720:CDS 40.0%
!! TTGTGCACTACCTTTGAGAT+TGG + chr7_1:78179728-78179747 Msa1040720:CDS 40.0%
TCTTCTATTCAAAAGCTCGC+CGG + chr7_1:78179895-78179914 Msa1040720:CDS 40.0%
ATATATTCCGACCTTTCAGG+TGG + chr7_1:78179927-78179946 Msa1040720:CDS 40.0%
! TATATTCCGACCTTTCAGGT+GGG + chr7_1:78179928-78179947 Msa1040720:CDS 40.0%
AGGTGGGAATCTTTGGATTA+TGG + chr7_1:78179944-78179963 Msa1040720:CDS 40.0%
! CGTTCATATACTGGCTAAAC+TGG + chr7_1:78180032-78180051 Msa1040720:three_prime_UTR 40.0%
ATACGAGTGATCCAAAGTAG+AGG - chr7_1:78180264-78180283 None:intergenic 40.0%
CTACTTTGGATCACTCGTAT+TGG + chr7_1:78180264-78180283 Msa1040720:three_prime_UTR 40.0%
!! CTCGTATTGGTTGACTGAAA+AGG + chr7_1:78180277-78180296 Msa1040720:three_prime_UTR 40.0%
! TGTGTGTGTACTGATGGAGA+TGG - chr7_1:78171270-78171289 None:intergenic 45.0%
AAGTACGGTTGGGTGGAAAA+GGG - chr7_1:78171300-78171319 None:intergenic 45.0%
! GAGTGAAATTGGGAAAGTGC+GGG - chr7_1:78171323-78171342 None:intergenic 45.0%
CGAGTGAAATTGGGAAAGTG+CGG - chr7_1:78171324-78171343 None:intergenic 45.0%
CCTCTGATTTAAGGGCTATG+GGG + chr7_1:78171685-78171704 Msa1040720:CDS 45.0%
CCGGAATAGGCAAAAATTGG+CGG - chr7_1:78171800-78171819 None:intergenic 45.0%
! CCGCCAATTTTTGCCTATTC+CGG + chr7_1:78171797-78171816 Msa1040720:CDS 45.0%
! TTTTTGCCTATTCCGGTTGG+TGG + chr7_1:78171804-78171823 Msa1040720:CDS 45.0%
GGGATTTGTCAAGTGAAGGA+AGG + chr7_1:78171882-78171901 Msa1040720:CDS 45.0%
GAGGAAGAGGGTTCTTATTG+TGG + chr7_1:78171908-78171927 Msa1040720:CDS 45.0%
!! TTAAACCTTGGTGGTGGTGT+TGG + chr7_1:78171978-78171997 Msa1040720:CDS 45.0%
GGGAAGAAAAGTAGAGTAGC+TGG + chr7_1:78172023-78172042 Msa1040720:CDS 45.0%
AAAAGTAGAGTAGCTGGTGG+AGG + chr7_1:78172029-78172048 Msa1040720:CDS 45.0%
!! TAGAGCATTTTGTCAGGTGG+AGG + chr7_1:78172061-78172080 Msa1040720:CDS 45.0%
GGTTCTGCCAACAATGTAGT+AGG + chr7_1:78172189-78172208 Msa1040720:CDS 45.0%
AAGAAGCTGTCGAAGACGTT+TGG + chr7_1:78172366-78172385 Msa1040720:CDS 45.0%
TGGCAGGCCATAATAAAAGG+AGG + chr7_1:78172386-78172405 Msa1040720:CDS 45.0%
! TCGTTCGGTGAACTTCCATT+AGG - chr7_1:78172436-78172455 None:intergenic 45.0%
GCAGCTAAGTTAATAGCTGC+AGG + chr7_1:78172665-78172684 Msa1040720:intron 45.0%
ATGTCTATTTCGGGCTACCA+AGG - chr7_1:78172789-78172808 None:intergenic 45.0%
!! ATGGAAGATAATGGGTCGGA+TGG + chr7_1:78172937-78172956 Msa1040720:intron 45.0%
!! TGGAAGATAATGGGTCGGAT+GGG + chr7_1:78172938-78172957 Msa1040720:intron 45.0%
! ACATGGGCATGAGAAGTGTA+CGG + chr7_1:78172966-78172985 Msa1040720:intron 45.0%
ACCACTCACGAGGATTCAAT+CGG + chr7_1:78173005-78173024 Msa1040720:intron 45.0%
GTCTATCTCTCTCCTAACAC+AGG + chr7_1:78173133-78173152 Msa1040720:intron 45.0%
CTCCTAACACAGGAGAGAAA+AGG + chr7_1:78173143-78173162 Msa1040720:intron 45.0%
! CTCCTTTTCTCTCCTGTGTT+AGG - chr7_1:78173148-78173167 None:intergenic 45.0%
!! GGCTTTAAAGGCTGCAAGAT+TGG + chr7_1:78173205-78173224 Msa1040720:intron 45.0%
AAAACTGACGTGTAGGGTGA+GGG - chr7_1:78173330-78173349 None:intergenic 45.0%
!! CCCTACACGTCAGTTTTGTA+AGG + chr7_1:78173333-78173352 Msa1040720:intron 45.0%
AAACTACTGGGCTTAGTGAG+TGG - chr7_1:78173430-78173449 None:intergenic 45.0%
! CTCACTAAGCCCAGTAGTTT+TGG + chr7_1:78173430-78173449 Msa1040720:intron 45.0%
! AAGCAGGCTTTGTAAGGTGA+GGG - chr7_1:78173473-78173492 None:intergenic 45.0%
! AAAGCAGGCTTTGTAAGGTG+AGG - chr7_1:78173474-78173493 None:intergenic 45.0%
GCGAACTCATCATACAAAGC+AGG - chr7_1:78173489-78173508 None:intergenic 45.0%
TATTGCACGAGTACATCGAC+TGG + chr7_1:78173572-78173591 Msa1040720:intron 45.0%
AGCATTTGTCAGTACCTTGG+GGG + chr7_1:78173607-78173626 Msa1040720:intron 45.0%
GGGGAACAGAGTATGGAATA+AGG + chr7_1:78173626-78173645 Msa1040720:intron 45.0%
TTCTGCTATGAGCCTATGAC+AGG + chr7_1:78173917-78173936 Msa1040720:intron 45.0%
AGCCTATGACAGGTAGTTGA+AGG + chr7_1:78173927-78173946 Msa1040720:intron 45.0%
ATGAGTAAGCAGATCCTGGT+CGG - chr7_1:78174004-78174023 None:intergenic 45.0%
GCTAATCAGAATGGCGAACA+AGG + chr7_1:78174039-78174058 Msa1040720:CDS 45.0%
AATCAGAATGGCGAACAAGG+GGG + chr7_1:78174042-78174061 Msa1040720:CDS 45.0%
GATTCTCAGGTTCCCGTAAA+AGG - chr7_1:78174083-78174102 None:intergenic 45.0%
TGGAGAACCTTGAGAACCAT+CGG - chr7_1:78174160-78174179 None:intergenic 45.0%
! ACCACATTTTCTGCAAAGCC+CGG + chr7_1:78174270-78174289 Msa1040720:CDS 45.0%
! TGGAGGGCTATTTGAAACAC+CGG - chr7_1:78174292-78174311 None:intergenic 45.0%
CTGCCTGTCACTACAAATCT+TGG + chr7_1:78174420-78174439 Msa1040720:CDS 45.0%
GCACCAAGATTTGTAGTGAC+AGG - chr7_1:78174426-78174445 None:intergenic 45.0%
! CTAGCTCTCTTGATTACCCA+TGG + chr7_1:78174445-78174464 Msa1040720:CDS 45.0%
TGATTACCCATGGATGCAAC+AGG + chr7_1:78174455-78174474 Msa1040720:CDS 45.0%
GTGAATCCTGTTGCATCCAT+GGG - chr7_1:78174464-78174483 None:intergenic 45.0%
TGTGAATCCTGTTGCATCCA+TGG - chr7_1:78174465-78174484 None:intergenic 45.0%
CACAAAATCCCAGTCATGGA+GGG - chr7_1:78174648-78174667 None:intergenic 45.0%
TCACAAAATCCCAGTCATGG+AGG - chr7_1:78174649-78174668 None:intergenic 45.0%
ATTTGTCATGCTGAGGTCGA+CGG + chr7_1:78174750-78174769 Msa1040720:intron 45.0%
! CTGATATTCTGATGGGTGTG+TGG + chr7_1:78174840-78174859 Msa1040720:intron 45.0%
AAGATCTGACAAGAGGTCAG+AGG + chr7_1:78174871-78174890 Msa1040720:intron 45.0%
AACTAAAGACCTCCTGTGTG+CGG - chr7_1:78174938-78174957 None:intergenic 45.0%
TTTGTCTTAGTCGTCCGACA+CGG + chr7_1:78175354-78175373 Msa1040720:intron 45.0%
GGCTCGTATGAGTGTTATAC+AGG + chr7_1:78175375-78175394 Msa1040720:intron 45.0%
TACTTCGACACTCCTACGAT+CGG - chr7_1:78175410-78175429 None:intergenic 45.0%
TTGGTCATCCTTACCAATCC+TGG + chr7_1:78175608-78175627 Msa1040720:intron 45.0%
TCAAACGCGCAGCCATTAAT+GGG - chr7_1:78175647-78175666 None:intergenic 45.0%
ATCAAACGCGCAGCCATTAA+TGG - chr7_1:78175648-78175667 None:intergenic 45.0%
!! AAATGGCGCCTGCTTGTTTT+TGG + chr7_1:78175745-78175764 Msa1040720:intron 45.0%
ATCCGTGCGATTCTAAATGG+TGG - chr7_1:78175933-78175952 None:intergenic 45.0%
! CCATTTAGAATCGCACGGAT+CGG + chr7_1:78175933-78175952 Msa1040720:intron 45.0%
TCCTCTTGTACTTAGAGCAC+AGG + chr7_1:78175994-78176013 Msa1040720:CDS 45.0%
! ACCTGTGCTCTAAGTACAAG+AGG - chr7_1:78175998-78176017 None:intergenic 45.0%
TATTTATCTGCGTCAGGCTG+AGG + chr7_1:78176174-78176193 Msa1040720:CDS 45.0%
! GTGTGGTTATTTCGGCAATC+AGG + chr7_1:78176248-78176267 Msa1040720:intron 45.0%
! GTGGTTATTTCGGCAATCAG+GGG + chr7_1:78176250-78176269 Msa1040720:intron 45.0%
! AACTGGATGGGTTCACATCA+GGG + chr7_1:78176378-78176397 Msa1040720:CDS 45.0%
! AACTGCAACTTTTCTGCTGC+AGG + chr7_1:78176751-78176770 Msa1040720:intron 45.0%
GGGGTGTATCAATGACAATC+TGG - chr7_1:78176777-78176796 None:intergenic 45.0%
TTGATACACCCCTTCCTTTC+AGG + chr7_1:78176785-78176804 Msa1040720:CDS 45.0%
GCTTATGGATCAATGCTCCA+AGG + chr7_1:78177107-78177126 Msa1040720:CDS 45.0%
CTGAAGCTCATCAAGATCCT+TGG - chr7_1:78177127-78177146 None:intergenic 45.0%
GAATGGACGAGGGTTTATTG+AGG + chr7_1:78177179-78177198 Msa1040720:CDS 45.0%
! GTGTGCCTTGTCTTTGGAAA+AGG + chr7_1:78177273-78177292 Msa1040720:intron 45.0%
ACCTCGTTACGTAATGGTCT+TGG + chr7_1:78177392-78177411 Msa1040720:intron 45.0%
TCCAAGACCATTACGTAACG+AGG - chr7_1:78177396-78177415 None:intergenic 45.0%
! GGGCACTTGTTAGTGTAATG+AGG + chr7_1:78177563-78177582 Msa1040720:intron 45.0%
! TGCCCTAAGAGCACATGTTA+AGG - chr7_1:78177677-78177696 None:intergenic 45.0%
AGTCAAAACCAACTCCAGTC+AGG - chr7_1:78177773-78177792 None:intergenic 45.0%
! GTCATACAATTTGGGACGGA+GGG - chr7_1:78177835-78177854 None:intergenic 45.0%
! CGACATACAATTTGGGATGG+AGG + chr7_1:78178086-78178105 Msa1040720:intron 45.0%
!! GATCCGGTTTGCTAACACAA+TGG - chr7_1:78178194-78178213 None:intergenic 45.0%
TTCCTGAACATGCCAGATTG+AGG + chr7_1:78178553-78178572 Msa1040720:intron 45.0%
AAAAACTGCTGCTCAAACCC+TGG - chr7_1:78178580-78178599 None:intergenic 45.0%
AGTTCTCTGTGGACCATGAT+TGG + chr7_1:78178843-78178862 Msa1040720:CDS 45.0%
TAACTACCGCACACCAATCA+TGG - chr7_1:78178859-78178878 None:intergenic 45.0%
TCACTGTTCCATCAAGCATG+AGG - chr7_1:78178895-78178914 None:intergenic 45.0%
CTTGATGGAACAGTGAGTAC+AGG + chr7_1:78178899-78178918 Msa1040720:CDS 45.0%
GTGCAAGATACAGGGATATG+TGG - chr7_1:78178928-78178947 None:intergenic 45.0%
TTAACCAGTGCCTTGTCTTC+AGG - chr7_1:78179055-78179074 None:intergenic 45.0%
!! GAAGACAAGGCACTGGTTAA+TGG + chr7_1:78179055-78179074 Msa1040720:CDS 45.0%
ATCCTCAGAACCATCTTTCC+CGG - chr7_1:78179152-78179171 None:intergenic 45.0%
TAACATTAACACGCTGCTCG+CGG - chr7_1:78179470-78179489 None:intergenic 45.0%
GAGCAGCGTGTTAATGTTAG+TGG + chr7_1:78179471-78179490 Msa1040720:intron 45.0%
TTCAGGTGGGAATTGAAGCA+TGG + chr7_1:78179528-78179547 Msa1040720:intron 45.0%
CAACACCTGAGGATTATGCA+CGG + chr7_1:78179576-78179595 Msa1040720:CDS 45.0%
TCGAACTTTGTCGGAATGCT+AGG - chr7_1:78179686-78179705 None:intergenic 45.0%
! TGGCTTGTGTCGAACTTTGT+CGG - chr7_1:78179695-78179714 None:intergenic 45.0%
AAGATTCCCACCTGAAAGGT+CGG - chr7_1:78179937-78179956 None:intergenic 45.0%
! ACCTTTCAGGTGGGAATCTT+TGG + chr7_1:78179937-78179956 Msa1040720:CDS 45.0%
TCCAAAGATTCCCACCTGAA+AGG - chr7_1:78179941-78179960 None:intergenic 45.0%
CTGATGCTTGTCAACCTACA+AGG + chr7_1:78179973-78179992 Msa1040720:exon 45.0%
TTATCATGCGGCCTCTACTT+TGG + chr7_1:78180250-78180269 Msa1040720:three_prime_UTR 45.0%
!! GTATAAATTTAATATATATA+AGG - chr7_1:78175868-78175887 None:intergenic 5.0%
GAAGTACGGTTGGGTGGAAA+AGG - chr7_1:78171301-78171320 None:intergenic 50.0%
! AAAGTGCGGGAAGTACGGTT+GGG - chr7_1:78171310-78171329 None:intergenic 50.0%
! TTGGGAAAGTGCGGGAAGTA+CGG - chr7_1:78171315-78171334 None:intergenic 50.0%
CCCCATAGCCCTTAAATCAG+AGG - chr7_1:78171688-78171707 None:intergenic 50.0%
! TAGTAAGTTGACTCCGGTGC+CGG + chr7_1:78171770-78171789 Msa1040720:CDS 50.0%
GGCAAAAATTGGCGGTGTTC+CGG - chr7_1:78171792-78171811 None:intergenic 50.0%
GTCAAGTGAAGGAAGGTGAG+AGG + chr7_1:78171889-78171908 Msa1040720:CDS 50.0%
TGAAGGAAGGTGAGAGGAAG+AGG + chr7_1:78171895-78171914 Msa1040720:CDS 50.0%
GAAGGAAGGTGAGAGGAAGA+GGG + chr7_1:78171896-78171915 Msa1040720:CDS 50.0%
!! TGGTGGTGTTGGTGCTACAT+GGG + chr7_1:78171989-78172008 Msa1040720:CDS 50.0%
AAGGCTAGTAAGGCCCTTGT+CGG + chr7_1:78172152-78172171 Msa1040720:CDS 50.0%
CTGCATCGCATTTCCGACAA+GGG - chr7_1:78172168-78172187 None:intergenic 50.0%
TTGTCGGAAATGCGATGCAG+CGG + chr7_1:78172168-78172187 Msa1040720:CDS 50.0%
ACAACTAGGCCCTGCATACA+TGG - chr7_1:78172540-78172559 None:intergenic 50.0%
GGTCGGATGGGATACAACAT+GGG + chr7_1:78172950-78172969 Msa1040720:intron 50.0%
ACCTTTCATCACCACTCACG+AGG + chr7_1:78172995-78173014 Msa1040720:intron 50.0%
! TCCTCGTGAGTGGTGATGAA+AGG - chr7_1:78172999-78173018 None:intergenic 50.0%
TCCGATTGAATCCTCGTGAG+TGG - chr7_1:78173009-78173028 None:intergenic 50.0%
CACAGGAGAGAAAAGGAGAG+AGG + chr7_1:78173150-78173169 Msa1040720:intron 50.0%
CAAAACTGACGTGTAGGGTG+AGG - chr7_1:78173331-78173350 None:intergenic 50.0%
! GAGTGGATATAAGTGGTGGG+TGG - chr7_1:78173413-78173432 None:intergenic 50.0%
CGCTTGCGTCCAAAACTACT+GGG - chr7_1:78173442-78173461 None:intergenic 50.0%
!!! CCAGTAGTTTTGGACGCAAG+CGG + chr7_1:78173440-78173459 Msa1040720:intron 50.0%
!!! CAGTAGTTTTGGACGCAAGC+GGG + chr7_1:78173441-78173460 Msa1040720:intron 50.0%
TACCTTGGGGGAACAGAGTA+TGG + chr7_1:78173619-78173638 Msa1040720:intron 50.0%
TTCCATACTCTGTTCCCCCA+AGG - chr7_1:78173624-78173643 None:intergenic 50.0%
ACCGGGCTTTGCAGAAAATG+TGG - chr7_1:78174274-78174293 None:intergenic 50.0%
! GGAGGGCTATTTGAAACACC+GGG - chr7_1:78174291-78174310 None:intergenic 50.0%
TGGCTTCTGAGTAAGCTGGA+GGG - chr7_1:78174308-78174327 None:intergenic 50.0%
! TCTCTGGCTTCTGAGTAAGC+TGG - chr7_1:78174312-78174331 None:intergenic 50.0%
GAAGCCAGAGATAGTACTGC+TGG + chr7_1:78174321-78174340 Msa1040720:CDS 50.0%
CTGTCCAGCAGTACTATCTC+TGG - chr7_1:78174328-78174347 None:intergenic 50.0%
TGACTCAGACGATGGCATAG+AGG + chr7_1:78174386-78174405 Msa1040720:CDS 50.0%
TCGAGTCCACCTCAAACAAG+TGG + chr7_1:78174489-78174508 Msa1040720:CDS 50.0%
AGTGGAACTAGAAGGGGACT+GGG - chr7_1:78174535-78174554 None:intergenic 50.0%
TTCGCCAGTGGAACTAGAAG+GGG - chr7_1:78174541-78174560 None:intergenic 50.0%
CTTCGCCAGTGGAACTAGAA+GGG - chr7_1:78174542-78174561 None:intergenic 50.0%
AAATACCTGAGCTTCGCCAG+TGG - chr7_1:78174553-78174572 None:intergenic 50.0%
TTTGTCATGCTGAGGTCGAC+GGG + chr7_1:78174751-78174770 Msa1040720:intron 50.0%
! CTGATGGGTGTGTGGTTCTT+AGG + chr7_1:78174848-78174867 Msa1040720:intron 50.0%
ATCTGACAAGAGGTCAGAGG+AGG + chr7_1:78174874-78174893 Msa1040720:intron 50.0%
TCTGACAAGAGGTCAGAGGA+GGG + chr7_1:78174875-78174894 Msa1040720:intron 50.0%
AGTATAAGGGGATGGGGAAG+AGG + chr7_1:78174958-78174977 Msa1040720:intron 50.0%
GAGGTGTGACCTATGAAGCA+TGG + chr7_1:78174977-78174996 Msa1040720:intron 50.0%
TGTCGGAGTCCATGCTTCAT+AGG - chr7_1:78174989-78175008 None:intergenic 50.0%
ATGAAGCATGGACTCCGACA+CGG + chr7_1:78174989-78175008 Msa1040720:intron 50.0%
AACACTCATACGAGCCGTGT+CGG - chr7_1:78175371-78175390 None:intergenic 50.0%
CCATACGACACGTGTCAAAC+CGG - chr7_1:78175458-78175477 None:intergenic 50.0%
CGGTTTGACACGTGTCGTAT+GGG + chr7_1:78175456-78175475 Msa1040720:intron 50.0%
CCGATCCGTGCGATTCTAAA+TGG - chr7_1:78175936-78175955 None:intergenic 50.0%
ACTACTAGCAGGTCTGTGTG+TGG + chr7_1:78176231-78176250 Msa1040720:intron 50.0%
! GAACTGGATGGGTTCACATC+AGG + chr7_1:78176377-78176396 Msa1040720:CDS 50.0%
TGTTCTGTCCCTGCGATGAA+TGG + chr7_1:78177162-78177181 Msa1040720:CDS 50.0%
CTTGCAGTGTGCCTTGTCTT+TGG + chr7_1:78177267-78177286 Msa1040720:intron 50.0%
! CGTCATACAATTTGGGACGG+AGG - chr7_1:78177836-78177855 None:intergenic 50.0%
GTCCTCAATCTGGCATGTTC+AGG - chr7_1:78178558-78178577 None:intergenic 50.0%
AACATGCCAGATTGAGGACC+AGG + chr7_1:78178559-78178578 Msa1040720:intron 50.0%
ACATGCCAGATTGAGGACCA+GGG + chr7_1:78178560-78178579 Msa1040720:intron 50.0%
TCAAACCCTGGTCCTCAATC+TGG - chr7_1:78178568-78178587 None:intergenic 50.0%
TCCTTTCATAGTCGTGGAGG+AGG + chr7_1:78178601-78178620 Msa1040720:CDS 50.0%
TCCTCCTCCACGACTATGAA+AGG - chr7_1:78178605-78178624 None:intergenic 50.0%
TATCCAGATGTTGAAGGGGC+TGG + chr7_1:78178677-78178696 Msa1040720:CDS 50.0%
TTTCCAGCCCCTTCAACATC+TGG - chr7_1:78178683-78178702 None:intergenic 50.0%
! AGATCGATTCAAGTGGCTCG+TGG + chr7_1:78178820-78178839 Msa1040720:CDS 50.0%
TGTGGACCATGATTGGTGTG+CGG + chr7_1:78178850-78178869 Msa1040720:CDS 50.0%
TTCTCCTCACAGCTCTGTGA+AGG - chr7_1:78178967-78178986 None:intergenic 50.0%
GAGCTGTGAGGAGAAATAGC+AGG + chr7_1:78178972-78178991 Msa1040720:CDS 50.0%
GAGGAGAAATAGCAGGCAGT+TGG + chr7_1:78178979-78178998 Msa1040720:CDS 50.0%
GAGAAATAGCAGGCAGTTGG+TGG + chr7_1:78178982-78179001 Msa1040720:CDS 50.0%
ACACCACTCCATATAGCAGC+CGG + chr7_1:78179130-78179149 Msa1040720:CDS 50.0%
CATCTTTCCCGGCTGCTATA+TGG - chr7_1:78179141-78179160 None:intergenic 50.0%
CATATAGCAGCCGGGAAAGA+TGG + chr7_1:78179139-78179158 Msa1040720:CDS 50.0%
TAACAGGGTTCAATCTGCGC+AGG - chr7_1:78179288-78179307 None:intergenic 50.0%
CGTAACCGTGCATAATCCTC+AGG - chr7_1:78179584-78179603 None:intergenic 50.0%
GAGGATTATGCACGGTTACG+TGG + chr7_1:78179584-78179603 Msa1040720:CDS 50.0%
CAGACCTGCAATGCTGTCAA+TGG + chr7_1:78179841-78179860 Msa1040720:CDS 50.0%
ACCTGCAATGCTGTCAATGG+TGG + chr7_1:78179844-78179863 Msa1040720:CDS 50.0%
GTCAATGGTGGCTATAGCAG+CGG + chr7_1:78179856-78179875 Msa1040720:CDS 50.0%
TCCTTGTGAGACTGCATGTG+TGG + chr7_1:78180122-78180141 Msa1040720:three_prime_UTR 50.0%
TCCACACATGCAGTCTCACA+AGG - chr7_1:78180126-78180145 None:intergenic 50.0%
! GAAAGTGCGGGAAGTACGGT+TGG - chr7_1:78171311-78171330 None:intergenic 55.0%
!! TTGCCTATTCCGGTTGGTGG+TGG + chr7_1:78171807-78171826 Msa1040720:CDS 55.0%
GAACAACCACCACCACCAAC+CGG - chr7_1:78171819-78171838 None:intergenic 55.0%
TAGCACCAACACCACCACCA+AGG - chr7_1:78171986-78172005 None:intergenic 55.0%
!! GTGGTGGTGTTGGTGCTACA+TGG + chr7_1:78171988-78172007 Msa1040720:CDS 55.0%
!! GGTGTTGGTGCTACATGGGA+AGG + chr7_1:78171993-78172012 Msa1040720:CDS 55.0%
GCTGCATCGCATTTCCGACA+AGG - chr7_1:78172169-78172188 None:intergenic 55.0%
AGCTGTCGAAGACGTTTGGC+AGG + chr7_1:78172370-78172389 Msa1040720:CDS 55.0%
TGCAGGGCCTAGTTGTCAGT+TGG + chr7_1:78172544-78172563 Msa1040720:intron 55.0%
GGGTCGGATGGGATACAACA+TGG + chr7_1:78172949-78172968 Msa1040720:intron 55.0%
!! ATAAGTGGTGGGTGGCCCAA+TGG - chr7_1:78173405-78173424 None:intergenic 55.0%
CCGCTTGCGTCCAAAACTAC+TGG - chr7_1:78173443-78173462 None:intergenic 55.0%
!!! TAGTTTTGGACGCAAGCGGG+TGG + chr7_1:78173444-78173463 Msa1040720:intron 55.0%
AGTAAGCAGATCCTGGTCGG+CGG - chr7_1:78174001-78174020 None:intergenic 55.0%
AGAATGGCGAACAAGGGGGA+AGG + chr7_1:78174046-78174065 Msa1040720:CDS 55.0%
CTGGCTTCTGAGTAAGCTGG+AGG - chr7_1:78174309-78174328 None:intergenic 55.0%
CAGTGGAACTAGAAGGGGAC+TGG - chr7_1:78174536-78174555 None:intergenic 55.0%
!! CAGTCCCCTTCTAGTTCCAC+TGG + chr7_1:78174534-78174553 Msa1040720:CDS 55.0%
GCTTCGCCAGTGGAACTAGA+AGG - chr7_1:78174543-78174562 None:intergenic 55.0%
TAGTTCCACTGGCGAAGCTC+AGG + chr7_1:78174545-78174564 Msa1040720:CDS 55.0%
GGAGGGTGAGTGTGAGCATA+AGG - chr7_1:78174631-78174650 None:intergenic 55.0%
TCACACTCACCCTCCATGAC+TGG + chr7_1:78174636-78174655 Msa1040720:intron 55.0%
CACACTCACCCTCCATGACT+GGG + chr7_1:78174637-78174656 Msa1040720:intron 55.0%
CTGACAAGAGGTCAGAGGAG+GGG + chr7_1:78174876-78174895 Msa1040720:intron 55.0%
AAGAGGTCAGAGGAGGGGAA+TGG + chr7_1:78174881-78174900 Msa1040720:intron 55.0%
CCTGTGTGCGGTATGTCAAC+AGG - chr7_1:78174926-78174945 None:intergenic 55.0%
CCTGTTGACATACCGCACAC+AGG + chr7_1:78174923-78174942 Msa1040720:intron 55.0%
GTTGACATACCGCACACAGG+AGG + chr7_1:78174926-78174945 Msa1040720:intron 55.0%
CACCTGACACGACACTGACA+CGG + chr7_1:78175013-78175032 Msa1040720:intron 55.0%
! CCGGTTTGACACGTGTCGTA+TGG + chr7_1:78175455-78175474 Msa1040720:intron 55.0%
TGTGAAGCACGGACACCTCT+AGG - chr7_1:78175518-78175537 None:intergenic 55.0%
!! TAGAGGTGTCCGTGCTTCAC+AGG + chr7_1:78175517-78175536 Msa1040720:intron 55.0%
!! AGAGGTGTCCGTGCTTCACA+GGG + chr7_1:78175518-78175537 Msa1040720:intron 55.0%
CATCAGGGTGCAGCATCAGA+TGG + chr7_1:78176393-78176412 Msa1040720:CDS 55.0%
TCCCTGCGATGAATGGACGA+GGG + chr7_1:78177169-78177188 Msa1040720:CDS 55.0%
ACCCTCGTCCATTCATCGCA+GGG - chr7_1:78177173-78177192 None:intergenic 55.0%
AACCCTCGTCCATTCATCGC+AGG - chr7_1:78177174-78177193 None:intergenic 55.0%
AACACGATAAGCCCTCGCCA+AGG + chr7_1:78177244-78177263 Msa1040720:intron 55.0%
ACAAGGCACACTGCAAGCCT+TGG - chr7_1:78177264-78177283 None:intergenic 55.0%
CTGTGTGCTTGAGCCTCTAC+TGG + chr7_1:78178640-78178659 Msa1040720:CDS 55.0%
GTCTCCTTCACAGAGCTGTG+AGG + chr7_1:78178960-78178979 Msa1040720:CDS 55.0%
AGGACCTGAAGACAAGGCAC+TGG + chr7_1:78179048-78179067 Msa1040720:CDS 55.0%
! TGGAGTGGTGTCAAACCAGC+AGG - chr7_1:78179121-78179140 None:intergenic 55.0%
CACCACTCCATATAGCAGCC+GGG + chr7_1:78179131-78179150 Msa1040720:CDS 55.0%
TTCCCGGCTGCTATATGGAG+TGG - chr7_1:78179136-78179155 None:intergenic 55.0%
! AGCCGGGAAAGATGGTTCTG+AGG + chr7_1:78179147-78179166 Msa1040720:CDS 55.0%
GCCACCATTGACAGCATTGC+AGG - chr7_1:78179848-78179867 None:intergenic 55.0%
AATTGGCGGTGTTCCGGCAC+CGG - chr7_1:78171786-78171805 None:intergenic 60.0%
CCACCACCACCAACCGGAAT+AGG - chr7_1:78171813-78171832 None:intergenic 60.0%
!! CCTATTCCGGTTGGTGGTGG+TGG + chr7_1:78171810-78171829 Msa1040720:CDS 60.0%
TCAGGTGGAGGATTGTCGCG+CGG + chr7_1:78172073-78172092 Msa1040720:CDS 60.0%
GTCAAATCAGACCGCCGACC+AGG + chr7_1:78173987-78174006 Msa1040720:CDS 60.0%
GTCGTGTCAGGTGTCCGTGT+CGG - chr7_1:78175006-78175025 None:intergenic 60.0%
GTCCGTGTCAGTGTCGTGTC+AGG - chr7_1:78175018-78175037 None:intergenic 60.0%
!! AGGTGTCGGACACCGATCGT+AGG + chr7_1:78175395-78175414 Msa1040720:intron 60.0%
!! CTCTAGGACTAGGCGTGTCG+CGG - chr7_1:78175502-78175521 None:intergenic 60.0%
!! GCACGGACACCTCTAGGACT+AGG - chr7_1:78175512-78175531 None:intergenic 60.0%
CGGTCACACCCTGTGAAGCA+CGG - chr7_1:78175529-78175548 None:intergenic 60.0%
TGCGTCAGGCTGAGGTTGTG+TGG + chr7_1:78176182-78176201 Msa1040720:CDS 60.0%
GCGTCAGGCTGAGGTTGTGT+GGG + chr7_1:78176183-78176202 Msa1040720:CDS 60.0%
TCAGGCTGAGGTTGTGTGGG+AGG + chr7_1:78176186-78176205 Msa1040720:CDS 60.0%
! ACCTGACTCGACCTGCCACA+AGG + chr7_1:78176893-78176912 Msa1040720:CDS 60.0%
ACCTTGTGGCAGGTCGAGTC+AGG - chr7_1:78176897-78176916 None:intergenic 60.0%
GTCCCTGCGATGAATGGACG+AGG + chr7_1:78177168-78177187 Msa1040720:CDS 60.0%
CACACTGCAAGCCTTGGCGA+GGG - chr7_1:78177258-78177277 None:intergenic 60.0%
GTGGCTCGTGGAGTTCTCTG+TGG + chr7_1:78178832-78178851 Msa1040720:CDS 60.0%
GAATAGTGCCCGCGACAGCA+CGG + chr7_1:78179550-78179569 Msa1040720:CDS 60.0%
AATAGTGCCCGCGACAGCAC+GGG + chr7_1:78179551-78179570 Msa1040720:CDS 60.0%
AGCAGCGGTCTGTGTCTGTG+TGG + chr7_1:78179871-78179890 Msa1040720:CDS 60.0%
! GTGCGGGAAGTACGGTTGGG+TGG - chr7_1:78171307-78171326 None:intergenic 65.0%
CGCGACACGCCTAGTCCTAG+AGG + chr7_1:78175500-78175519 Msa1040720:intron 65.0%
GGCTGAGGTTGTGTGGGAGG+AGG + chr7_1:78176189-78176208 Msa1040720:CDS 65.0%
GCACACTGCAAGCCTTGGCG+AGG - chr7_1:78177259-78177278 None:intergenic 65.0%
CCAGCAGGACCGACAGCATC+AGG - chr7_1:78179106-78179125 None:intergenic 65.0%
CCTGATGCTGTCGGTCCTGC+TGG + chr7_1:78179103-78179122 Msa1040720:CDS 65.0%
ATAGTGCCCGCGACAGCACG+GGG + chr7_1:78179552-78179571 Msa1040720:CDS 65.0%
TGTTGACCCCGTGCTGTCGC+GGG - chr7_1:78179561-78179580 None:intergenic 65.0%
! GTGTTGACCCCGTGCTGTCG+CGG - chr7_1:78179562-78179581 None:intergenic 65.0%
CAGCACGGGGTCAACACCTG+AGG + chr7_1:78179565-78179584 Msa1040720:CDS 65.0%
GAGTCAAGGAGGGGCTCACG+TGG + chr7_1:78179649-78179668 Msa1040720:CDS 65.0%
TCAAGGAGGGGCTCACGTGG+TGG + chr7_1:78179652-78179671 Msa1040720:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78171103 78180308 78171103 ID=Msa1040720;Name=Msa1040720
chr7_1 mRNA 78171103 78180308 78171103 ID=Msa1040720-mRNA-1;Parent=Msa1040720;Name=Msa1040720-mRNA-1;_AED=0.06;_eAED=0.06;_QI=484|1|1|1|0.9|0.81|11|332|999
chr7_1 exon 78171103 78171412 78171103 ID=Msa1040720-mRNA-1:exon:20770;Parent=Msa1040720-mRNA-1
chr7_1 exon 78171474 78172210 78171474 ID=Msa1040720-mRNA-1:exon:20771;Parent=Msa1040720-mRNA-1
chr7_1 exon 78172333 78172514 78172333 ID=Msa1040720-mRNA-1:exon:20772;Parent=Msa1040720-mRNA-1
chr7_1 exon 78173980 78174566 78173980 ID=Msa1040720-mRNA-1:exon:20773;Parent=Msa1040720-mRNA-1
chr7_1 exon 78175941 78176015 78175941 ID=Msa1040720-mRNA-1:exon:20774;Parent=Msa1040720-mRNA-1
chr7_1 exon 78176103 78176210 78176103 ID=Msa1040720-mRNA-1:exon:20775;Parent=Msa1040720-mRNA-1
chr7_1 exon 78176313 78176430 78176313 ID=Msa1040720-mRNA-1:exon:20776;Parent=Msa1040720-mRNA-1
chr7_1 exon 78176773 78176914 78176773 ID=Msa1040720-mRNA-1:exon:20777;Parent=Msa1040720-mRNA-1
chr7_1 exon 78177056 78177200 78177056 ID=Msa1040720-mRNA-1:exon:20778;Parent=Msa1040720-mRNA-1
chr7_1 exon 78178569 78179204 78178569 ID=Msa1040720-mRNA-1:exon:20779;Parent=Msa1040720-mRNA-1
chr7_1 exon 78179533 78180308 78179533 ID=Msa1040720-mRNA-1:exon:20780;Parent=Msa1040720-mRNA-1
chr7_1 five_prime_UTR 78171103 78171412 78171103 ID=Msa1040720-mRNA-1:five_prime_utr;Parent=Msa1040720-mRNA-1
chr7_1 five_prime_UTR 78171474 78171647 78171474 ID=Msa1040720-mRNA-1:five_prime_utr;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78171648 78172210 78171648 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78172333 78172514 78172333 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78173980 78174566 78173980 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78175941 78176015 78175941 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78176103 78176210 78176103 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78176313 78176430 78176313 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78176773 78176914 78176773 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78177056 78177200 78177056 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78178569 78179204 78178569 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 CDS 78179533 78179976 78179533 ID=Msa1040720-mRNA-1:cds;Parent=Msa1040720-mRNA-1
chr7_1 three_prime_UTR 78179977 78180308 78179977 ID=Msa1040720-mRNA-1:three_prime_utr;Parent=Msa1040720-mRNA-1
Gene Sequence

>Msa1040720

ATGGAAGCTTTTCAATTGTACGGTAATGATGGTAATTCCTCTGATTTAAGGGCTATGGGGAAAAAATCAAAAGAATGGGATTTGAATAGTTGGAAATGGGATAGTGATCTTTTCATAGCTACTAGTAAGTTGACTCCGGTGCCGGAACACCGCCAATTTTTGCCTATTCCGGTTGGTGGTGGTGGTTGTTCTAACTCAAATAGTTCATCATCTTGCTCAGAACAGTTAGATCTTGGGATTTGTCAAGTGAAGGAAGGTGAGAGGAAGAGGGTTCTTATTGTGGAAGATGAACTAGGTTTAGGTTTGAATAAGGAAGGTGGTAATCTTAGTTTAAACCTTGGTGGTGGTGTTGGTGCTACATGGGAAGGAAATAATGGGAAGAAAAGTAGAGTAGCTGGTGGAGGTAGTTCTAGTAGAGCATTTTGTCAGGTGGAGGATTGTCGCGCGGATCTTAACAACGCTAAAGATTATCACCGACGTCATAAAGTTTGTGAGATACATTCAAAGGCTAGTAAGGCCCTTGTCGGAAATGCGATGCAGCGGTTCTGCCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGACGAAGGAAAAAGAAGCTGTCGAAGACGTTTGGCAGGCCATAATAAAAGGAGGAGAAAAACAAATCAAGATGCTGTTCCTAATGGAAGTTCACCGAACGATGATCAGACTAGTAGTTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCAGCCTGACAGGTCAAATCAGACCGCCGACCAGGATCTGCTTACTCATCTTTTAAGGAGTCTTGCTAATCAGAATGGCGAACAAGGGGGAAGGAACTTGTCTAACCTTTTACGGGAACCTGAGAATCTGTTAAAAGAAGGGTCTTTATCTGGGAAGTCTGAGATGGTTTCTACTTTAGTTACCGATGGTTCTCAAGGTTCTCCAACTGTTACAGTACAGAATCAAACAGTTTCTATAAGTGAAATTCAGCATCAAGTGATGCATTCACATGATGCTAGGGTTGCTGATCAACAAACCACATTTTCTGCAAAGCCCGGTGTTTCAAATAGCCCTCCAGCTTACTCAGAAGCCAGAGATAGTACTGCTGGACAGACCAAGATGAATGATTTTGATCTGAATGACATCTATATTGACTCAGACGATGGCATAGAGGACATAGAAAGGCTGCCTGTCACTACAAATCTTGGTGCTAGCTCTCTTGATTACCCATGGATGCAACAGGATTCACATCAGTCGAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCCACTGGCGAAGCTCAGAATCGCACGGATCGGATTGTTTTTAAACTCTTCGGTAAAGGACCAAGCGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGATTGGTTATCCCACAGTCCAACTGATATTGAAGGATATATACGGCCTGGTTGTGTTGTTTTGACTATTTATCTGCGTCAGGCTGAGGTTGTGTGGGAGGAGCTATGCTTTGATCTGACTTCCAGTTTGAATAGGCTTCTGGATGTCTCAGATGATGATTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTCAATGGCCAGATTGTCATTGATACACCCCTTCCTTTCAGGAGTAATAATTATGGTAAGATTTTGAGTGTTAGTCCAATTGCTGTACCATCATCAAAGACAGCTCAATTTTCTGTGAAGGGTGTCAACCTGACTCGACCTGCCACAAGGTTATTGTGTGCTTTAGAAGGGAATTATTTGGACTGTGAAGATACTCATGAGCTTATGGATCAATGCTCCAAGGATCTTGATGAGCTTCAGTGCATCCAATTTTCATGTTCTGTCCCTGCGATGAATGGACGAGGGTTTATTGAGATTGAGGACCAGGGTTTGAGCAGCAGTTTTTTTCCTTTCATAGTCGTGGAGGAGGATGTTTGCTCTGAAATCTGTGTGCTTGAGCCTCTACTGGAATCAAGTGATACTTATCCAGATGTTGAAGGGGCTGGAAAAATTCAAGCAAAAAATCAAGCCATGGATTTCATTCATGAAATGGGTTGGCTTCTCCACAGAAAGCAAATAAAATCTAGGGTGGTTCGTTTGAATTCTAGTATGGATCTGTTTCCATTAGATCGATTCAAGTGGCTCGTGGAGTTCTCTGTGGACCATGATTGGTGTGCGGTAGTTAAAAAGCTATTGAACCTCATGCTTGATGGAACAGTGAGTACAGGAGACCACATATCCCTGTATCTTGCACTTTCAGAGTTGGGTCTCCTTCACAGAGCTGTGAGGAGAAATAGCAGGCAGTTGGTGGAGCTTCTTTTGAGATTTGTTCCTCAAAATATTTCAGATAAACTAGGACCTGAAGACAAGGCACTGGTTAATGGAGAGAATCAAAACTTCTTGTTTAGACCTGATGCTGTCGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCCGGGAAAGATGGTTCTGAGGATGTGCTAGATGCTTTGACTAATGATCCTTGCATGGTGGGAATTGAAGCATGGAATAGTGCCCGCGACAGCACGGGGTCAACACCTGAGGATTATGCACGGTTACGTGGTCATTATACTTACATTCATTTGGTGCAAAAGAAAATCAACAAGAGTCAAGGAGGGGCTCACGTGGTGGTTGATATTCCTAGCATTCCGACAAAGTTCGACACAAGCCAGAAGAAAGATGAATTGTGCACTACCTTTGAGATTGGAAATGCTGAAGTTAAAAAGGTTGGAAAGGACTGCAAACTTTGTGATCATAAGCTATCGTGTAGAACTGCTGTACGAAAGTCTTTCGTATACAGACCTGCAATGCTGTCAATGGTGGCTATAGCAGCGGTCTGTGTCTGTGTGGCTCTTCTATTCAAAAGCTCGCCGGAAGTTCTGTATATATTCCGACCTTTCAGGTGGGAATCTTTGGATTATGGAACAAGCTGA
Protein sequence

>Msa1040720

MEAFQLYGNDGNSSDLRAMGKKSKEWDLNSWKWDSDLFIATSKLTPVPEHRQFLPIPVGGGGCSNSNSSSSCSEQLDLGICQVKEGERKRVLIVEDELGLGLNKEGGNLSLNLGGGVGATWEGNNGKKSRVAGGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNQDAVPNGSSPNDDQTSSYLLISLLKILSNMQPDRSNQTADQDLLTHLLRSLANQNGEQGGRNLSNLLREPENLLKEGSLSGKSEMVSTLVTDGSQGSPTVTVQNQTVSISEIQHQVMHSHDARVADQQTTFSAKPGVSNSPPAYSEARDSTAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNLGASSLDYPWMQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQNRTDRIVFKLFGKGPSDFPLVLRAQILDWLSHSPTDIEGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLDVSDDDFWRTGWVHIRVQHQMAFIFNGQIVIDTPLPFRSNNYGKILSVSPIAVPSSKTAQFSVKGVNLTRPATRLLCALEGNYLDCEDTHELMDQCSKDLDELQCIQFSCSVPAMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICVLEPLLESSDTYPDVEGAGKIQAKNQAMDFIHEMGWLLHRKQIKSRVVRLNSSMDLFPLDRFKWLVEFSVDHDWCAVVKKLLNLMLDGTVSTGDHISLYLALSELGLLHRAVRRNSRQLVELLLRFVPQNISDKLGPEDKALVNGENQNFLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWNSARDSTGSTPEDYARLRGHYTYIHLVQKKINKSQGGAHVVVDIPSIPTKFDTSQKKDELCTTFEIGNAEVKKVGKDCKLCDHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWESLDYGTS*