Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042680 | XP_003625012.1 | 99.793 | 482 | 1 | 0 | 1 | 482 | 1 | 482 | 0.0 | 992 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042680 | sp|Q2HW56|NOOT1_MEDTR | 99.793 | 482 | 1 | 0 | 1 | 482 | 1 | 482 | 0.0 | 992 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042680 | A0A1S2XRJ0 | 88.798 | 491 | 37 | 10 | 1 | 482 | 1 | 482 | 0.0 | 814 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1042680 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1042680 | Msa1073280 | 0.819806 | 9.572871e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042680 | MtrunA17_Chr7g0256321 | 99.793 | 482 | 1 | 0 | 1 | 482 | 1 | 482 | 0.0 | 992 |
| Msa1042680 | MtrunA17_Chr1g0171771 | 79.010 | 505 | 70 | 8 | 1 | 482 | 1 | 492 | 0.0 | 726 |
| Msa1042680 | MtrunA17_Chr5g0442661 | 34.239 | 368 | 212 | 9 | 24 | 386 | 66 | 408 | 1.46e-51 | 184 |
| Msa1042680 | MtrunA17_Chr2g0291741 | 35.156 | 384 | 222 | 9 | 6 | 386 | 44 | 403 | 2.95e-50 | 180 |
| Msa1042680 | MtrunA17_Chr2g0299621 | 30.376 | 372 | 216 | 7 | 24 | 388 | 65 | 400 | 3.41e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042680 | AT2G41370.1 | 78.689 | 488 | 77 | 10 | 3 | 478 | 4 | 476 | 0.0 | 744 |
| Msa1042680 | AT3G57130.1 | 75.417 | 480 | 83 | 8 | 2 | 476 | 4 | 453 | 0.0 | 712 |
| Msa1042680 | AT3G57130.2 | 74.699 | 166 | 34 | 2 | 2 | 162 | 4 | 166 | 7.11e-83 | 254 |
| Msa1042680 | AT4G19660.1 | 31.880 | 367 | 208 | 7 | 25 | 386 | 56 | 385 | 6.11e-46 | 169 |
| Msa1042680 | AT4G19660.2 | 31.880 | 367 | 208 | 7 | 25 | 386 | 56 | 385 | 7.85e-46 | 169 |
| Msa1042680 | AT5G45110.1 | 30.990 | 384 | 234 | 8 | 6 | 386 | 40 | 395 | 5.68e-42 | 158 |
| Msa1042680 | AT5G45110.2 | 30.990 | 384 | 234 | 8 | 6 | 386 | 40 | 395 | 8.15e-42 | 156 |
| Msa1042680 | AT1G64280.1 | 29.132 | 357 | 221 | 6 | 32 | 386 | 73 | 399 | 7.78e-33 | 132 |
| Msa1042680 | AT4G26120.1 | 29.640 | 361 | 209 | 9 | 33 | 386 | 76 | 398 | 1.31e-31 | 128 |
| Msa1042680 | AT4G26120.2 | 29.640 | 361 | 209 | 9 | 33 | 386 | 77 | 399 | 1.33e-31 | 128 |
Find 155 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATAGAAAATCTGAAGTT+AGG | 0.230108 | 7_1:+80668344 | None:intergenic |
| GATGCGAAGCTCTTCGATTT+TGG | 0.235029 | 7_1:+80668780 | None:intergenic |
| TGTGGGCCAGACCCACCTTC+TGG | 0.259914 | 7_1:-80670503 | Msa1042680:CDS |
| GACATGATTGTTTAGGGTTA+TGG | 0.282175 | 7_1:+80670683 | None:intergenic |
| TTCAAGGGACATGATTGTTT+AGG | 0.311764 | 7_1:+80670676 | None:intergenic |
| AAACACAACCTTAGTTTGTT+TGG | 0.315039 | 7_1:+80668289 | None:intergenic |
| TCAAGGGACATGATTGTTTA+GGG | 0.321591 | 7_1:+80670677 | None:intergenic |
| AGATGAATTGAAATAATAAA+AGG | 0.323094 | 7_1:+80667389 | None:intergenic |
| ATGATGGTGGTGAGGCATTA+AGG | 0.333824 | 7_1:+80668735 | None:intergenic |
| AACAAGACATGCACCAACTA+TGG | 0.344045 | 7_1:-80668882 | Msa1042680:CDS |
| AATGGTGACTAGTATTTGAT+AGG | 0.346077 | 7_1:+80667617 | None:intergenic |
| CATTTGAAGTGCGGTTTCAT+AGG | 0.351916 | 7_1:-80667598 | Msa1042680:three_prime_UTR |
| ATAAAAGGAAGACAATAAAT+AGG | 0.353356 | 7_1:+80667404 | None:intergenic |
| CTAATGCTTCATCAAGGTTT+AGG | 0.354695 | 7_1:+80668590 | None:intergenic |
| AAACAAACTAAGGTTGTGTT+TGG | 0.362323 | 7_1:-80668287 | Msa1042680:CDS |
| GGAGATGGTCTCACCGGATA+TGG | 0.367743 | 7_1:-80668446 | Msa1042680:CDS |
| TGCAGCCGATGTTAACTTCC+CGG | 0.370396 | 7_1:-80668506 | Msa1042680:CDS |
| CAACCACGGTCACCACAATT+AGG | 0.374903 | 7_1:+80670326 | None:intergenic |
| CCATCAACTGTTCTCACATT+CGG | 0.388403 | 7_1:+80668394 | None:intergenic |
| AACTTCCCGGCTGGTCCAAC+GGG | 0.394050 | 7_1:-80668493 | Msa1042680:CDS |
| GGATGCATGGAGGAGACTTT+AGG | 0.401342 | 7_1:-80667507 | Msa1042680:three_prime_UTR |
| CATCAACTGTTCTCACATTC+GGG | 0.411634 | 7_1:+80668395 | None:intergenic |
| CTATTCAAAGGTGCTGTCCC+TGG | 0.412212 | 7_1:-80668328 | Msa1042680:CDS |
| CTGCAATTCTCAACGGCATA+AGG | 0.421725 | 7_1:+80668562 | None:intergenic |
| AGAAGTTGTGAAAGCCTTGT+TGG | 0.425240 | 7_1:-80668536 | Msa1042680:CDS |
| CTATGAAACCGCACTTCAAA+TGG | 0.425279 | 7_1:+80667599 | None:intergenic |
| TGTTATTGTTGTTGTGGCTA+TGG | 0.425330 | 7_1:+80668131 | None:intergenic |
| GAGATCTTAGTGAGTCTTCA+AGG | 0.426128 | 7_1:+80670660 | None:intergenic |
| GGGTTGACTCGGTTTCCTGA+TGG | 0.427587 | 7_1:+80670473 | None:intergenic |
| ATTGAAAATAATTGAGAAAG+TGG | 0.429644 | 7_1:+80667355 | None:intergenic |
| GAATAGAAAATCTGAAGTTA+GGG | 0.433840 | 7_1:+80668345 | None:intergenic |
| TCGTAACCAACTGAGTTAAC+TGG | 0.436058 | 7_1:+80670422 | None:intergenic |
| AGTACTTCAAGAATGGATTC+TGG | 0.438677 | 7_1:-80668061 | Msa1042680:CDS |
| GGTTGACTCGGTTTCCTGAT+GGG | 0.440013 | 7_1:+80670474 | None:intergenic |
| AACACCAGACCTAGCTGAAC+CGG | 0.442219 | 7_1:+80670448 | None:intergenic |
| AGCAATACAGCCACCATATC+CGG | 0.442702 | 7_1:+80668433 | None:intergenic |
| TTCTTCAGAAAATTCTTCTG+TGG | 0.443436 | 7_1:-80670521 | Msa1042680:CDS |
| CTTGTGAAACTCATGGTAAT+GGG | 0.452131 | 7_1:-80668619 | Msa1042680:CDS |
| GCTTGTGAAACTCATGGTAA+TGG | 0.456091 | 7_1:-80668620 | Msa1042680:CDS |
| TCTAATCCAGAAGGTGGGTC+TGG | 0.456640 | 7_1:+80670497 | None:intergenic |
| GGAAAGAAAGAAAGAAAGAA+AGG | 0.459540 | 7_1:+80670819 | None:intergenic |
| ATCACATTTCCCATCCCAAC+AGG | 0.461625 | 7_1:-80670896 | None:intergenic |
| CATTAAGGAGCGGCGTGATA+AGG | 0.463719 | 7_1:+80668750 | None:intergenic |
| GGTTCAATGTGAGTTAATCC+AGG | 0.466615 | 7_1:+80668310 | None:intergenic |
| GTCTTCAAGGTCGGCTGCAG+CGG | 0.467472 | 7_1:+80668690 | None:intergenic |
| GTTATACCAGTTAACTCAGT+TGG | 0.472537 | 7_1:-80670428 | Msa1042680:CDS |
| TCCCACCTTGTAGCAAAATC+AGG | 0.472615 | 7_1:-80668850 | Msa1042680:CDS |
| AATCCATGTTATTGTTGTTG+TGG | 0.476042 | 7_1:+80668125 | None:intergenic |
| TCAAATGAGTACTTCAAGAA+TGG | 0.477419 | 7_1:-80668068 | Msa1042680:CDS |
| GATTGAAAGAGAGAGAGGTT+TGG | 0.480640 | 7_1:+80670714 | None:intergenic |
| TTGAAAATAATTGAGAAAGT+GGG | 0.483260 | 7_1:+80667356 | None:intergenic |
| GGTCGGCTGCAGCGGTGAGA+TGG | 0.490105 | 7_1:+80668698 | None:intergenic |
| CTTGTTATGTCAAGGGAAGA+AGG | 0.491332 | 7_1:-80668244 | Msa1042680:CDS |
| AGTGCGGTTTCATAGGAGAA+TGG | 0.494407 | 7_1:-80667591 | Msa1042680:three_prime_UTR |
| GCCGATGTTAACTTCCCGGC+TGG | 0.496241 | 7_1:-80668502 | Msa1042680:CDS |
| AGTTGATGGTGTTACACCCT+TGG | 0.497853 | 7_1:-80668380 | Msa1042680:CDS |
| GTGCGGTTTCATAGGAGAAT+GGG | 0.501672 | 7_1:-80667590 | Msa1042680:three_prime_UTR |
| ATTGTGGTGACCGTGGTTGT+TGG | 0.504368 | 7_1:-80670322 | Msa1042680:CDS |
| TTTCCTAATCATATAAAAGA+TGG | 0.505963 | 7_1:+80667317 | None:intergenic |
| TATGGAGGGGTATACCTGTT+GGG | 0.509746 | 7_1:+80670882 | None:intergenic |
| TAACTTCCCGGCTGGTCCAA+CGG | 0.512321 | 7_1:-80668494 | Msa1042680:CDS |
| ACAACAATAACATGGATTCA+AGG | 0.512387 | 7_1:-80668120 | Msa1042680:CDS |
| TGAGGGATTCTTATATATGG+AGG | 0.512950 | 7_1:+80670867 | None:intergenic |
| TTATGGATTGAAAGAGAGAG+AGG | 0.513241 | 7_1:+80670709 | None:intergenic |
| TGAAAATAATTGAGAAAGTG+GGG | 0.516522 | 7_1:+80667357 | None:intergenic |
| TCTTCAGAAAATTCTTCTGT+GGG | 0.516918 | 7_1:-80670520 | Msa1042680:CDS |
| ACGCTTGTCCGTTGATGAGA+AGG | 0.520055 | 7_1:+80670618 | None:intergenic |
| CCGAATGTGAGAACAGTTGA+TGG | 0.521071 | 7_1:-80668394 | Msa1042680:CDS |
| CCTTCTGGATTAGACCCATC+AGG | 0.521120 | 7_1:-80670488 | Msa1042680:CDS |
| ACATTGAACCAAACAAACTA+AGG | 0.522706 | 7_1:-80668297 | Msa1042680:CDS |
| GCTACATATTGCAGCGGAGA+TGG | 0.524554 | 7_1:-80668461 | Msa1042680:CDS |
| GAGGGATTCTTATATATGGA+GGG | 0.525055 | 7_1:+80670868 | None:intergenic |
| CTTTCAGCCGCTAGATACTT+CGG | 0.525081 | 7_1:-80670257 | Msa1042680:CDS |
| TGCTACAAGGTGGGAACATG+TGG | 0.531996 | 7_1:+80668858 | None:intergenic |
| CTGCAGCTCTTGTTATGTCA+AGG | 0.533449 | 7_1:-80668252 | Msa1042680:CDS |
| TAGGGTTCTTAGAATGTCCA+AGG | 0.536805 | 7_1:+80668363 | None:intergenic |
| CCATCCGGTTCAGCTAGGTC+TGG | 0.539454 | 7_1:-80670452 | Msa1042680:CDS |
| GGAAACCGAGTCAACCCATC+CGG | 0.539988 | 7_1:-80670467 | Msa1042680:CDS |
| GGTCGTGATGGTGAGGATGA+TGG | 0.543235 | 7_1:+80668719 | None:intergenic |
| TACTTAAACCTTCTCATCAA+CGG | 0.546164 | 7_1:-80670626 | Msa1042680:CDS |
| ATGTATCATCATCACTCTCA+TGG | 0.548599 | 7_1:-80667998 | Msa1042680:CDS |
| AGGTTGGTGTATCTTAACCT+TGG | 0.550322 | 7_1:-80668100 | Msa1042680:CDS |
| TGATGTCTTGATGATGATGA+TGG | 0.551151 | 7_1:+80670795 | None:intergenic |
| GAGGGGTATACCTGTTGGGA+TGG | 0.551185 | 7_1:+80670886 | None:intergenic |
| TCACATTCGGGTCAGCGTGA+TGG | 0.551477 | 7_1:+80668407 | None:intergenic |
| CTGAACCGGATGGGTTGACT+CGG | 0.552813 | 7_1:+80670462 | None:intergenic |
| TATTGTTGTTGTGGCTATGG+TGG | 0.553140 | 7_1:+80668134 | None:intergenic |
| CAATAACATGGATTCAAGGT+TGG | 0.554832 | 7_1:-80668116 | Msa1042680:CDS |
| AGGGGTATACCTGTTGGGAT+GGG | 0.555350 | 7_1:+80670887 | None:intergenic |
| GGCCTAGGTTCATGTTTCTG+AGG | 0.555362 | 7_1:+80670347 | None:intergenic |
| CTCGACGTCTGAGGAGTCGA+GGG | 0.562950 | 7_1:+80668642 | None:intergenic |
| TGCAGCGGAGATGGTCTCAC+CGG | 0.562963 | 7_1:-80668452 | Msa1042680:CDS |
| GTGATGATGATAATACTCAC+AGG | 0.563231 | 7_1:-80668039 | Msa1042680:CDS |
| GCTCGACGTCTGAGGAGTCG+AGG | 0.564744 | 7_1:+80668641 | None:intergenic |
| GAAAGAAAGAAAGAAAGGAA+AGG | 0.567131 | 7_1:+80670824 | None:intergenic |
| ATATGGAGGGGTATACCTGT+TGG | 0.567656 | 7_1:+80670881 | None:intergenic |
| AAACTCATGGTAATGGGAGA+AGG | 0.568060 | 7_1:-80668613 | Msa1042680:CDS |
| ACAGCTTGCATTGCTCACTC+AGG | 0.569799 | 7_1:-80670228 | Msa1042680:intron |
| GGAAGACAATAAATAGGCCG+TGG | 0.570163 | 7_1:+80667410 | None:intergenic |
| GTAATGCTAATGCTTCATCA+AGG | 0.571238 | 7_1:+80668584 | None:intergenic |
| GTTCAATGTGAGTTAATCCA+GGG | 0.571864 | 7_1:+80668311 | None:intergenic |
| GTGAAAGCCTTGTTGGAACT+CGG | 0.572326 | 7_1:-80668529 | Msa1042680:CDS |
| ATGCTTCAGTTTCTGTACAG+TGG | 0.576559 | 7_1:-80670386 | Msa1042680:CDS |
| TTTCATTACATCTTCAATCG+AGG | 0.580013 | 7_1:+80668924 | None:intergenic |
| TGCAGCTCTTGTTATGTCAA+GGG | 0.587236 | 7_1:-80668251 | Msa1042680:CDS |
| AAGAGCAAGATCAACGGCTG+AGG | 0.588511 | 7_1:+80670286 | None:intergenic |
| CGGTCACCACAATTAGGCCT+AGG | 0.589003 | 7_1:+80670332 | None:intergenic |
| TTCTCTACTGCAATTCTCAA+CGG | 0.590267 | 7_1:+80668555 | None:intergenic |
| TCAACCCATCCGGTTCAGCT+AGG | 0.592108 | 7_1:-80670457 | Msa1042680:CDS |
| CTAAGATGCATCTGTGTGCG+TGG | 0.593852 | 7_1:+80670558 | None:intergenic |
| GTAACTACTCTTACATGCAA+AGG | 0.595237 | 7_1:+80667954 | None:intergenic |
| TAAGGAGCGGCGTGATAAGG+AGG | 0.595576 | 7_1:+80668753 | None:intergenic |
| GGGAACATGTGGTCCATAGT+TGG | 0.598309 | 7_1:+80668869 | None:intergenic |
| GATGGGTCTAATCCAGAAGG+TGG | 0.598545 | 7_1:+80670491 | None:intergenic |
| ACAGAAACAACTAGCGAGCA+TGG | 0.599468 | 7_1:-80668956 | Msa1042680:intron |
| CGTCGAGCTTGTGAAACTCA+TGG | 0.600204 | 7_1:-80668626 | Msa1042680:CDS |
| GAAAATAATTGAGAAAGTGG+GGG | 0.601706 | 7_1:+80667358 | None:intergenic |
| AGTTAACTCAGTTGGTTACG+AGG | 0.607152 | 7_1:-80670420 | Msa1042680:CDS |
| GATGGTCTCACCGGATATGG+TGG | 0.607668 | 7_1:-80668443 | Msa1042680:CDS |
| AGGGATTCTTATATATGGAG+GGG | 0.608413 | 7_1:+80670869 | None:intergenic |
| TGGAATGAAAGGATGCATGG+AGG | 0.610232 | 7_1:-80667517 | Msa1042680:three_prime_UTR |
| CAGCGGTGAGATGGTCGTGA+TGG | 0.610483 | 7_1:+80668707 | None:intergenic |
| CCAGACCTAGCTGAACCGGA+TGG | 0.611566 | 7_1:+80670452 | None:intergenic |
| AGATCTTAGTGAGTCTTCAA+GGG | 0.612991 | 7_1:+80670661 | None:intergenic |
| TTTCACAAGCTCGACGTCTG+AGG | 0.613011 | 7_1:+80668633 | None:intergenic |
| ACTAGTCACCATTTGAAGTG+CGG | 0.618264 | 7_1:-80667607 | Msa1042680:three_prime_UTR |
| TCTTCATTCATATTATGATG+AGG | 0.620406 | 7_1:+80668160 | None:intergenic |
| CCTGATGGGTCTAATCCAGA+AGG | 0.623455 | 7_1:+80670488 | None:intergenic |
| CAGACCTAGCTGAACCGGAT+GGG | 0.623790 | 7_1:+80670453 | None:intergenic |
| TGGTGAGGATGATGGTGGTG+AGG | 0.629304 | 7_1:+80668727 | None:intergenic |
| ATGAGAGTGATGATGATACA+TGG | 0.631388 | 7_1:+80668000 | None:intergenic |
| CGTGATGGTGAGGATGATGG+TGG | 0.631651 | 7_1:+80668722 | None:intergenic |
| TGTCTTGATGATGATGATGG+TGG | 0.639879 | 7_1:+80670798 | None:intergenic |
| TAGCCACAACAACAATAACA+TGG | 0.640552 | 7_1:-80668128 | Msa1042680:CDS |
| CTGATGTGAAGCTAATACCA+CGG | 0.642043 | 7_1:-80667427 | Msa1042680:three_prime_UTR |
| CATGAACCTAGGCCTAATTG+TGG | 0.646688 | 7_1:-80670338 | Msa1042680:CDS |
| GGCTGCACCGAGTTCCAACA+AGG | 0.646855 | 7_1:+80668522 | None:intergenic |
| TCATTTGAGTATTAGCACCA+AGG | 0.650291 | 7_1:+80668083 | None:intergenic |
| AGTATCAAGAGCAAGATCAA+CGG | 0.653625 | 7_1:+80670280 | None:intergenic |
| GTGAGATGGTCGTGATGGTG+AGG | 0.655300 | 7_1:+80668712 | None:intergenic |
| ATGGGTCTAATCCAGAAGGT+GGG | 0.656727 | 7_1:+80670492 | None:intergenic |
| ATCTCCGCTGCAATATGTAG+CGG | 0.657846 | 7_1:+80668463 | None:intergenic |
| AGGGTTCTTAGAATGTCCAA+GGG | 0.662287 | 7_1:+80668364 | None:intergenic |
| TTCAACTCCGAAGTATCTAG+CGG | 0.662542 | 7_1:+80670250 | None:intergenic |
| TTCCTCAGAAACATGAACCT+AGG | 0.668829 | 7_1:-80670349 | Msa1042680:CDS |
| AACTCCGCTACATATTGCAG+CGG | 0.669845 | 7_1:-80668467 | Msa1042680:CDS |
| GGTGGTGAGGCATTAAGGAG+CGG | 0.674544 | 7_1:+80668740 | None:intergenic |
| AATGTGTATGCCAACAACCA+CGG | 0.675672 | 7_1:+80670312 | None:intergenic |
| AAAATAATTGAGAAAGTGGG+GGG | 0.680558 | 7_1:+80667359 | None:intergenic |
| GGAGAATGGGATAAGAGACA+AGG | 0.681472 | 7_1:-80667577 | Msa1042680:three_prime_UTR |
| TGATGATGATAATACTCACA+GGG | 0.685503 | 7_1:-80668038 | Msa1042680:CDS |
| ACCAGCCGGGAAGTTAACAT+CGG | 0.692763 | 7_1:+80668501 | None:intergenic |
| TTGAAGACCAGAAAATCCGT+CGG | 0.696642 | 7_1:-80668675 | Msa1042680:CDS |
| AGGCCTAATTGTGGTGACCG+TGG | 0.704495 | 7_1:-80670329 | Msa1042680:CDS |
| GAAACAACTAGCGAGCATGG+TGG | 0.736366 | 7_1:-80668953 | Msa1042680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTATTAATTTTAATT+AGG | + | chr7_1:80670264-80670283 | None:intergenic | 0.0% |
| !!! | ATTTTTATTTTTTTTATTTT+TGG | - | chr7_1:80670546-80670565 | Msa1042680:CDS | 0.0% |
| !!! | TTTTTTTTATTTTTGGTTTT+AGG | - | chr7_1:80670553-80670572 | Msa1042680:CDS | 10.0% |
| !! | AAAACAATAATAAAGAGAAA+AGG | + | chr7_1:80668003-80668022 | None:intergenic | 15.0% |
| !!! | CATCAATTTTTTAATGAAAT+AGG | - | chr7_1:80668271-80668290 | Msa1042680:CDS | 15.0% |
| !! | ATGGAAAAAAATAAAATCAA+AGG | + | chr7_1:80668610-80668629 | None:intergenic | 15.0% |
| !! | ATCACAAATTAACAAAAATA+TGG | + | chr7_1:80668629-80668648 | None:intergenic | 15.0% |
| !!! | GTTATTTCAATTACAATTAA+TGG | - | chr7_1:80670326-80670345 | Msa1042680:CDS | 15.0% |
| !!! | TGATTTTTTTTTTTCTGTTT+TGG | - | chr7_1:80670492-80670511 | Msa1042680:CDS | 15.0% |
| !!! | TTTTTATTTTTTGGAATGAA+AGG | - | chr7_1:80670665-80670684 | Msa1042680:CDS | 15.0% |
| !! | AGATGAATTGAAATAATAAA+AGG | + | chr7_1:80670807-80670826 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTATCTGTCTTTA+CGG | + | chr7_1:80668557-80668576 | None:intergenic | 20.0% |
| !!! | AACATTGATGCATTTTTTAT+AGG | - | chr7_1:80669125-80669144 | Msa1042680:intron | 20.0% |
| !! | ATAAAAGGAAGACAATAAAT+AGG | + | chr7_1:80670792-80670811 | None:intergenic | 20.0% |
| !! | TTGAAAATAATTGAGAAAGT+GGG | + | chr7_1:80670840-80670859 | None:intergenic | 20.0% |
| !! | ATTGAAAATAATTGAGAAAG+TGG | + | chr7_1:80670841-80670860 | None:intergenic | 20.0% |
| !! | TTTCCTAATCATATAAAAGA+TGG | + | chr7_1:80670879-80670898 | None:intergenic | 20.0% |
| !!! | ATCTTTTATATGATTAGGAA+AGG | - | chr7_1:80670878-80670897 | Msa1042680:five_prime_UTR | 20.0% |
| !!! | TTTTGAGGGATTCTTATATA+TGG | + | chr7_1:80667332-80667351 | None:intergenic | 25.0% |
| ! | CAATAATAAAGAGAAAAGGA+AGG | + | chr7_1:80667999-80668018 | None:intergenic | 25.0% |
| ! | TTCTCTACTACACTTATTAA+TGG | + | chr7_1:80668028-80668047 | None:intergenic | 25.0% |
| !!! | TTTTTGTTAATTAATGGGTG+AGG | - | chr7_1:80668215-80668234 | Msa1042680:CDS | 25.0% |
| ! | TCAACAATAGATAGATAACT+TGG | - | chr7_1:80668367-80668386 | Msa1042680:CDS | 25.0% |
| ! | GACAGTAGAATTAATTAATG+AGG | + | chr7_1:80668491-80668510 | None:intergenic | 25.0% |
| ! | AAAGGAATCAATTAATGTGA+CGG | + | chr7_1:80668592-80668611 | None:intergenic | 25.0% |
| ! | ATTTCATGTTATGTATGTAC+TGG | - | chr7_1:80668662-80668681 | Msa1042680:CDS | 25.0% |
| ! | ATTTAGAAACTCATTCTAGT+GGG | + | chr7_1:80668738-80668757 | None:intergenic | 25.0% |
| ! | AATTTAGAAACTCATTCTAG+TGG | + | chr7_1:80668739-80668758 | None:intergenic | 25.0% |
| !!! | ATTTGGTCTTAAAGAAGAAA+AGG | - | chr7_1:80668845-80668864 | Msa1042680:CDS | 25.0% |
| !!! | TTTGGTCTTAAAGAAGAAAA+GGG | - | chr7_1:80668846-80668865 | Msa1042680:CDS | 25.0% |
| ! | AAAAACTACATTTCATGCAA+GGG | + | chr7_1:80668994-80669013 | None:intergenic | 25.0% |
| ! | AAAAAACTACATTTCATGCA+AGG | + | chr7_1:80668995-80669014 | None:intergenic | 25.0% |
| !!! | CATATATAATAGCATTGATG+CGG | + | chr7_1:80669055-80669074 | None:intergenic | 25.0% |
| !! | CTATTTAAAACCTAATTGCT+TGG | - | chr7_1:80669083-80669102 | Msa1042680:intron | 25.0% |
| !!! | TTTTGGCTATGATATCAATA+GGG | + | chr7_1:80669399-80669418 | None:intergenic | 25.0% |
| !!! | ATTTTGGCTATGATATCAAT+AGG | + | chr7_1:80669400-80669419 | None:intergenic | 25.0% |
| !! | GAATAGAAAATCTGAAGTTA+GGG | + | chr7_1:80669851-80669870 | None:intergenic | 25.0% |
| !! | TGAATAGAAAATCTGAAGTT+AGG | + | chr7_1:80669852-80669871 | None:intergenic | 25.0% |
| !! | ACTTCAGATTTTCTATTCAA+AGG | - | chr7_1:80669853-80669872 | Msa1042680:intron | 25.0% |
| ! | TCTTCATTCATATTATGATG+AGG | + | chr7_1:80670036-80670055 | None:intergenic | 25.0% |
| !! | TTTTGTGAGATGATATATAG+TGG | - | chr7_1:80670444-80670463 | Msa1042680:CDS | 25.0% |
| ! | TGAAAATAATTGAGAAAGTG+GGG | + | chr7_1:80670839-80670858 | None:intergenic | 25.0% |
| !! | CTACCATCTTTTATATGATT+AGG | - | chr7_1:80670873-80670892 | Msa1042680:five_prime_UTR | 25.0% |
| !!! | CTGTGATTGTTGTTTTTTGA+GGG | + | chr7_1:80667346-80667365 | None:intergenic | 30.0% |
| !!! | ACTGTGATTGTTGTTTTTTG+AGG | + | chr7_1:80667347-80667366 | None:intergenic | 30.0% |
| GAAAGAAAGAAAGAAAGGAA+AGG | + | chr7_1:80667372-80667391 | None:intergenic | 30.0% | |
| GGAAAGAAAGAAAGAAAGAA+AGG | + | chr7_1:80667377-80667396 | None:intergenic | 30.0% | |
| !! | GTTTAGGGTTATGGTTTTTA+TGG | + | chr7_1:80667504-80667523 | None:intergenic | 30.0% |
| TACTTAAACCTTCTCATCAA+CGG | - | chr7_1:80667567-80667586 | Msa1042680:three_prime_UTR | 30.0% | |
| TTCTTCAGAAAATTCTTCTG+TGG | - | chr7_1:80667672-80667691 | Msa1042680:intron | 30.0% | |
| TCTTCAGAAAATTCTTCTGT+GGG | - | chr7_1:80667673-80667692 | Msa1042680:intron | 30.0% | |
| TCTATCTATTGTTGATCGAT+GGG | + | chr7_1:80668362-80668381 | None:intergenic | 30.0% | |
| ATCTATCTATTGTTGATCGA+TGG | + | chr7_1:80668363-80668382 | None:intergenic | 30.0% | |
| CAATAGATAGATAACTTGGT+TGG | - | chr7_1:80668371-80668390 | Msa1042680:CDS | 30.0% | |
| GAAGACACAAGATCAAATAA+TGG | + | chr7_1:80668404-80668423 | None:intergenic | 30.0% | |
| ATGTATGTACTGGAAATTAG+AGG | - | chr7_1:80668672-80668691 | Msa1042680:CDS | 30.0% | |
| TGAGGAAAGTGAATGTATTT+GGG | + | chr7_1:80668826-80668845 | None:intergenic | 30.0% | |
| ATGAGGAAAGTGAATGTATT+TGG | + | chr7_1:80668827-80668846 | None:intergenic | 30.0% | |
| ATACATTCACTTTCCTCATT+TGG | - | chr7_1:80668828-80668847 | Msa1042680:CDS | 30.0% | |
| !! | TTCTTCTTTAAGACCAAATG+AGG | + | chr7_1:80668844-80668863 | None:intergenic | 30.0% |
| GAAAGAGAGTTAGACATAAA+TGG | + | chr7_1:80668873-80668892 | None:intergenic | 30.0% | |
| TCTCTTTCATTTACCAAATG+AGG | - | chr7_1:80668885-80668904 | Msa1042680:CDS | 30.0% | |
| TTTCATTACATCTTCAATCG+AGG | + | chr7_1:80669272-80669291 | None:intergenic | 30.0% | |
| ACATTGAACCAAACAAACTA+AGG | - | chr7_1:80669896-80669915 | Msa1042680:intron | 30.0% | |
| !! | AAACACAACCTTAGTTTGTT+TGG | + | chr7_1:80669907-80669926 | None:intergenic | 30.0% |
| AAACAAACTAAGGTTGTGTT+TGG | - | chr7_1:80669906-80669925 | Msa1042680:intron | 30.0% | |
| ! | AATCCATGTTATTGTTGTTG+TGG | + | chr7_1:80670071-80670090 | None:intergenic | 30.0% |
| ACAACAATAACATGGATTCA+AGG | - | chr7_1:80670073-80670092 | Msa1042680:intron | 30.0% | |
| TCAAATGAGTACTTCAAGAA+TGG | - | chr7_1:80670125-80670144 | Msa1042680:intron | 30.0% | |
| ! | TGATGATGATAATACTCACA+GGG | - | chr7_1:80670155-80670174 | Msa1042680:intron | 30.0% |
| ! | TTACAATTAATGGACCATGA+TGG | - | chr7_1:80670336-80670355 | Msa1042680:CDS | 30.0% |
| ! | CATGATGGAAAATTTAACGA+GGG | - | chr7_1:80670351-80670370 | Msa1042680:CDS | 30.0% |
| ! | ATGATGGAAAATTTAACGAG+GGG | - | chr7_1:80670352-80670371 | Msa1042680:CDS | 30.0% |
| AATGGTGACTAGTATTTGAT+AGG | + | chr7_1:80670579-80670598 | None:intergenic | 30.0% | |
| AAAATAATTGAGAAAGTGGG+GGG | + | chr7_1:80670837-80670856 | None:intergenic | 30.0% | |
| GAAAATAATTGAGAAAGTGG+GGG | + | chr7_1:80670838-80670857 | None:intergenic | 30.0% | |
| AGGGATTCTTATATATGGAG+GGG | + | chr7_1:80667327-80667346 | None:intergenic | 35.0% | |
| GAGGGATTCTTATATATGGA+GGG | + | chr7_1:80667328-80667347 | None:intergenic | 35.0% | |
| TGAGGGATTCTTATATATGG+AGG | + | chr7_1:80667329-80667348 | None:intergenic | 35.0% | |
| !! | TGATGTCTTGATGATGATGA+TGG | + | chr7_1:80667401-80667420 | None:intergenic | 35.0% |
| ! | TTATGGATTGAAAGAGAGAG+AGG | + | chr7_1:80667487-80667506 | None:intergenic | 35.0% |
| ! | GACATGATTGTTTAGGGTTA+TGG | + | chr7_1:80667513-80667532 | None:intergenic | 35.0% |
| TCAAGGGACATGATTGTTTA+GGG | + | chr7_1:80667519-80667538 | None:intergenic | 35.0% | |
| TTCAAGGGACATGATTGTTT+AGG | + | chr7_1:80667520-80667539 | None:intergenic | 35.0% | |
| AGATCTTAGTGAGTCTTCAA+GGG | + | chr7_1:80667535-80667554 | None:intergenic | 35.0% | |
| GTTATACCAGTTAACTCAGT+TGG | - | chr7_1:80667765-80667784 | Msa1042680:intron | 35.0% | |
| AGTATCAAGAGCAAGATCAA+CGG | + | chr7_1:80667916-80667935 | None:intergenic | 35.0% | |
| !!! | TGACCAGTCGTATGTTTTTT+GGG | - | chr7_1:80668128-80668147 | Msa1042680:CDS | 35.0% |
| !!! | TCGTATGTTTTTTGGGTCTT+GGG | - | chr7_1:80668135-80668154 | Msa1042680:CDS | 35.0% |
| !!! | TTTCCACAGTTACTGGTTTT+TGG | - | chr7_1:80668160-80668179 | Msa1042680:CDS | 35.0% |
| !!! | TTCCACAGTTACTGGTTTTT+GGG | - | chr7_1:80668161-80668180 | Msa1042680:CDS | 35.0% |
| ! | GAGGAATGAGAATGAGATTT+TGG | - | chr7_1:80668234-80668253 | Msa1042680:CDS | 35.0% |
| ! | ACATGACAGTTTTCTCGATT+TGG | - | chr7_1:80668702-80668721 | Msa1042680:CDS | 35.0% |
| !!! | GTGGTTTTGTTATCCTCATT+TGG | + | chr7_1:80668901-80668920 | None:intergenic | 35.0% |
| CGATTTCATTCCAAGCAATT+AGG | + | chr7_1:80669096-80669115 | None:intergenic | 35.0% | |
| !!! | TGTCTTGTTTTCTTGATGCT+AGG | + | chr7_1:80669300-80669319 | None:intergenic | 35.0% |
| ! | ATGTTTTGCAAGTACTTCTG+GGG | + | chr7_1:80669374-80669393 | None:intergenic | 35.0% |
| ! | GATGTTTTGCAAGTACTTCT+GGG | + | chr7_1:80669375-80669394 | None:intergenic | 35.0% |
| ! | AGATGTTTTGCAAGTACTTC+TGG | + | chr7_1:80669376-80669395 | None:intergenic | 35.0% |
| CTTGTGAAACTCATGGTAAT+GGG | - | chr7_1:80669574-80669593 | Msa1042680:intron | 35.0% | |
| CTAATGCTTCATCAAGGTTT+AGG | + | chr7_1:80669606-80669625 | None:intergenic | 35.0% | |
| GTAATGCTAATGCTTCATCA+AGG | + | chr7_1:80669612-80669631 | None:intergenic | 35.0% | |
| TTCTCTACTGCAATTCTCAA+CGG | + | chr7_1:80669641-80669660 | None:intergenic | 35.0% | |
| GTTCAATGTGAGTTAATCCA+GGG | + | chr7_1:80669885-80669904 | None:intergenic | 35.0% | |
| ! | TGTTATTGTTGTTGTGGCTA+TGG | + | chr7_1:80670065-80670084 | None:intergenic | 35.0% |
| TAGCCACAACAACAATAACA+TGG | - | chr7_1:80670065-80670084 | Msa1042680:intron | 35.0% | |
| CAATAACATGGATTCAAGGT+TGG | - | chr7_1:80670077-80670096 | Msa1042680:intron | 35.0% | |
| TCATTTGAGTATTAGCACCA+AGG | + | chr7_1:80670113-80670132 | None:intergenic | 35.0% | |
| ! | AGTACTTCAAGAATGGATTC+TGG | - | chr7_1:80670132-80670151 | Msa1042680:intron | 35.0% |
| ! | GTGATGATGATAATACTCAC+AGG | - | chr7_1:80670154-80670173 | Msa1042680:intron | 35.0% |
| ! | ATGAGAGTGATGATGATACA+TGG | + | chr7_1:80670196-80670215 | None:intergenic | 35.0% |
| ATGTATCATCATCACTCTCA+TGG | - | chr7_1:80670195-80670214 | Msa1042680:intron | 35.0% | |
| GTAACTACTCTTACATGCAA+AGG | + | chr7_1:80670242-80670261 | None:intergenic | 35.0% | |
| ! | CCTCGTTAAATTTTCCATCA+TGG | + | chr7_1:80670353-80670372 | None:intergenic | 35.0% |
| ! | CCATGATGGAAAATTTAACG+AGG | - | chr7_1:80670350-80670369 | Msa1042680:CDS | 35.0% |
| !!! | TTTTGGAATGAAAGGATGCA+TGG | - | chr7_1:80670673-80670692 | Msa1042680:exon | 35.0% |
| !! | TGTCTTGATGATGATGATGG+TGG | + | chr7_1:80667398-80667417 | None:intergenic | 40.0% |
| GATTGAAAGAGAGAGAGGTT+TGG | + | chr7_1:80667482-80667501 | None:intergenic | 40.0% | |
| GAGATCTTAGTGAGTCTTCA+AGG | + | chr7_1:80667536-80667555 | None:intergenic | 40.0% | |
| TCGTAACCAACTGAGTTAAC+TGG | + | chr7_1:80667774-80667793 | None:intergenic | 40.0% | |
| AGTTAACTCAGTTGGTTACG+AGG | - | chr7_1:80667773-80667792 | Msa1042680:intron | 40.0% | |
| ATGCTTCAGTTTCTGTACAG+TGG | - | chr7_1:80667807-80667826 | Msa1042680:intron | 40.0% | |
| TTCCTCAGAAACATGAACCT+AGG | - | chr7_1:80667844-80667863 | Msa1042680:intron | 40.0% | |
| AATGTGTATGCCAACAACCA+CGG | + | chr7_1:80667884-80667903 | None:intergenic | 40.0% | |
| ! | TTCAACTCCGAAGTATCTAG+CGG | + | chr7_1:80667946-80667965 | None:intergenic | 40.0% |
| !!! | GTGACCAGTCGTATGTTTTT+TGG | - | chr7_1:80668127-80668146 | Msa1042680:CDS | 40.0% |
| AGACCCAAAAAACATACGAC+TGG | + | chr7_1:80668134-80668153 | None:intergenic | 40.0% | |
| !!! | GTCGTATGTTTTTTGGGTCT+TGG | - | chr7_1:80668134-80668153 | Msa1042680:CDS | 40.0% |
| TTGGGAATTTCCACAGTTAC+TGG | - | chr7_1:80668153-80668172 | Msa1042680:CDS | 40.0% | |
| TTCCCAAAAACCAGTAACTG+TGG | + | chr7_1:80668166-80668185 | None:intergenic | 40.0% | |
| !!! | AGTTACTGGTTTTTGGGAAC+TGG | - | chr7_1:80668167-80668186 | Msa1042680:CDS | 40.0% |
| !!! | GTTACTGGTTTTTGGGAACT+GGG | - | chr7_1:80668168-80668187 | Msa1042680:CDS | 40.0% |
| TCAAGCAACAAACTGTGAAG+AGG | + | chr7_1:80668527-80668546 | None:intergenic | 40.0% | |
| AGCAAAGAGAAGAAAGTGAG+TGG | + | chr7_1:80668920-80668939 | None:intergenic | 40.0% | |
| ! | AGGGAAAAGAGTTTGGGATT+TGG | + | chr7_1:80668975-80668994 | None:intergenic | 40.0% |
| CATGCAAGGGAAAAGAGTTT+GGG | + | chr7_1:80668981-80669000 | None:intergenic | 40.0% | |
| TCATGCAAGGGAAAAGAGTT+TGG | + | chr7_1:80668982-80669001 | None:intergenic | 40.0% | |
| AACAAGACATGCACCAACTA+TGG | - | chr7_1:80669311-80669330 | Msa1042680:intron | 40.0% | |
| ! | ACCTGATTTTGCTACAAGGT+GGG | + | chr7_1:80669347-80669366 | None:intergenic | 40.0% |
| ! | GAAGACCTGATTTTGCTACA+AGG | + | chr7_1:80669351-80669370 | None:intergenic | 40.0% |
| ! | TGTTTTGCAAGTACTTCTGG+GGG | + | chr7_1:80669373-80669392 | None:intergenic | 40.0% |
| !! | GATTTTCTGGTCTTCAAGGT+CGG | + | chr7_1:80669515-80669534 | None:intergenic | 40.0% |
| TTGAAGACCAGAAAATCCGT+CGG | - | chr7_1:80669518-80669537 | Msa1042680:intron | 40.0% | |
| GCTTGTGAAACTCATGGTAA+TGG | - | chr7_1:80669573-80669592 | Msa1042680:intron | 40.0% | |
| !! | AAACTCATGGTAATGGGAGA+AGG | - | chr7_1:80669580-80669599 | Msa1042680:intron | 40.0% |
| ! | AGAAGTTGTGAAAGCCTTGT+TGG | - | chr7_1:80669657-80669676 | Msa1042680:intron | 40.0% |
| CATCAACTGTTCTCACATTC+GGG | + | chr7_1:80669801-80669820 | None:intergenic | 40.0% | |
| CCATCAACTGTTCTCACATT+CGG | + | chr7_1:80669802-80669821 | None:intergenic | 40.0% | |
| AGGGTTCTTAGAATGTCCAA+GGG | + | chr7_1:80669832-80669851 | None:intergenic | 40.0% | |
| TAGGGTTCTTAGAATGTCCA+AGG | + | chr7_1:80669833-80669852 | None:intergenic | 40.0% | |
| GGTTCAATGTGAGTTAATCC+AGG | + | chr7_1:80669886-80669905 | None:intergenic | 40.0% | |
| ! | TGCAGCTCTTGTTATGTCAA+GGG | - | chr7_1:80669942-80669961 | Msa1042680:intron | 40.0% |
| ! | CTTGTTATGTCAAGGGAAGA+AGG | - | chr7_1:80669949-80669968 | Msa1042680:intron | 40.0% |
| ! | TATTGTTGTTGTGGCTATGG+TGG | + | chr7_1:80670062-80670081 | None:intergenic | 40.0% |
| !! | AGGTTGGTGTATCTTAACCT+TGG | - | chr7_1:80670093-80670112 | Msa1042680:intron | 40.0% |
| TGGAAAATTTAACGAGGGGA+AGG | - | chr7_1:80670356-80670375 | Msa1042680:CDS | 40.0% | |
| ! | TTGGCTCTCTGATGTTTAGT+TGG | - | chr7_1:80670511-80670530 | Msa1042680:CDS | 40.0% |
| TGGCTCTCTGATGTTTAGTT+GGG | - | chr7_1:80670512-80670531 | Msa1042680:CDS | 40.0% | |
| ! | ACTAGTCACCATTTGAAGTG+CGG | - | chr7_1:80670586-80670605 | Msa1042680:CDS | 40.0% |
| CTATGAAACCGCACTTCAAA+TGG | + | chr7_1:80670597-80670616 | None:intergenic | 40.0% | |
| ! | CATTTGAAGTGCGGTTTCAT+AGG | - | chr7_1:80670595-80670614 | Msa1042680:CDS | 40.0% |
| CTGATGTGAAGCTAATACCA+CGG | - | chr7_1:80670766-80670785 | Msa1042680:five_prime_UTR | 40.0% | |
| ! | TATGGAGGGGTATACCTGTT+GGG | + | chr7_1:80667314-80667333 | None:intergenic | 45.0% |
| ! | ATATGGAGGGGTATACCTGT+TGG | + | chr7_1:80667315-80667334 | None:intergenic | 45.0% |
| ATGGGTCTAATCCAGAAGGT+GGG | + | chr7_1:80667704-80667723 | None:intergenic | 45.0% | |
| CATGAACCTAGGCCTAATTG+TGG | - | chr7_1:80667855-80667874 | Msa1042680:intron | 45.0% | |
| CTTTCAGCCGCTAGATACTT+CGG | - | chr7_1:80667936-80667955 | Msa1042680:intron | 45.0% | |
| ACAGAAACAACTAGCGAGCA+TGG | - | chr7_1:80669237-80669256 | Msa1042680:intron | 45.0% | |
| TCCCACCTTGTAGCAAAATC+AGG | - | chr7_1:80669343-80669362 | Msa1042680:intron | 45.0% | |
| ! | GACCTGATTTTGCTACAAGG+TGG | + | chr7_1:80669348-80669367 | None:intergenic | 45.0% |
| ! | GATGCGAAGCTCTTCGATTT+TGG | + | chr7_1:80669416-80669435 | None:intergenic | 45.0% |
| !! | ATGATGGTGGTGAGGCATTA+AGG | + | chr7_1:80669461-80669480 | None:intergenic | 45.0% |
| !! | GACGGATTTTCTGGTCTTCA+AGG | + | chr7_1:80669519-80669538 | None:intergenic | 45.0% |
| CTGCAATTCTCAACGGCATA+AGG | + | chr7_1:80669634-80669653 | None:intergenic | 45.0% | |
| !! | GTGAAAGCCTTGTTGGAACT+CGG | - | chr7_1:80669664-80669683 | Msa1042680:intron | 45.0% |
| AACTCCGCTACATATTGCAG+CGG | - | chr7_1:80669726-80669745 | Msa1042680:intron | 45.0% | |
| ATCTCCGCTGCAATATGTAG+CGG | + | chr7_1:80669733-80669752 | None:intergenic | 45.0% | |
| AGCAATACAGCCACCATATC+CGG | + | chr7_1:80669763-80669782 | None:intergenic | 45.0% | |
| CCGAATGTGAGAACAGTTGA+TGG | - | chr7_1:80669799-80669818 | Msa1042680:intron | 45.0% | |
| !! | AGTTGATGGTGTTACACCCT+TGG | - | chr7_1:80669813-80669832 | Msa1042680:intron | 45.0% |
| ! | CTGCAGCTCTTGTTATGTCA+AGG | - | chr7_1:80669941-80669960 | Msa1042680:intron | 45.0% |
| !! | GGGAAGGTTTTGTCCATGAA+AGG | - | chr7_1:80670372-80670391 | Msa1042680:CDS | 45.0% |
| ! | CCATGATGAAGCACCTTTCA+TGG | + | chr7_1:80670388-80670407 | None:intergenic | 45.0% |
| !! | CCATGAAAGGTGCTTCATCA+TGG | - | chr7_1:80670385-80670404 | Msa1042680:CDS | 45.0% |
| !! | TGAAAGGTGCTTCATCATGG+TGG | - | chr7_1:80670388-80670407 | Msa1042680:CDS | 45.0% |
| AGTGCGGTTTCATAGGAGAA+TGG | - | chr7_1:80670602-80670621 | Msa1042680:CDS | 45.0% | |
| GTGCGGTTTCATAGGAGAAT+GGG | - | chr7_1:80670603-80670622 | Msa1042680:CDS | 45.0% | |
| GGAGAATGGGATAAGAGACA+AGG | - | chr7_1:80670616-80670635 | Msa1042680:CDS | 45.0% | |
| TGGAATGAAAGGATGCATGG+AGG | - | chr7_1:80670676-80670695 | Msa1042680:exon | 45.0% | |
| GGAAGACAATAAATAGGCCG+TGG | + | chr7_1:80670786-80670805 | None:intergenic | 45.0% | |
| TAATTGAGAAAGTGGGGGGT+GGG | + | chr7_1:80670833-80670852 | None:intergenic | 45.0% | |
| ATAATTGAGAAAGTGGGGGG+TGG | + | chr7_1:80670834-80670853 | None:intergenic | 45.0% | |
| !!! | TATTATTTTTTGTTAATTAA+TGG | - | chr7_1:80668209-80668228 | Msa1042680:CDS | 5.0% |
| !!! | ATTATTTTTTGTTAATTAAT+GGG | - | chr7_1:80668210-80668229 | Msa1042680:CDS | 5.0% |
| !!! | TCAATTTTATTTTTATTTTT+TGG | - | chr7_1:80670656-80670675 | Msa1042680:CDS | 5.0% |
| ! | AGGGGTATACCTGTTGGGAT+GGG | + | chr7_1:80667309-80667328 | None:intergenic | 50.0% |
| ! | ACGCTTGTCCGTTGATGAGA+AGG | + | chr7_1:80667578-80667597 | None:intergenic | 50.0% |
| !! | GACGTTGTTTTCAGCGTCGA+AGG | - | chr7_1:80667603-80667622 | Msa1042680:three_prime_UTR | 50.0% |
| CTAAGATGCATCTGTGTGCG+TGG | + | chr7_1:80667638-80667657 | None:intergenic | 50.0% | |
| TCTAATCCAGAAGGTGGGTC+TGG | + | chr7_1:80667699-80667718 | None:intergenic | 50.0% | |
| GATGGGTCTAATCCAGAAGG+TGG | + | chr7_1:80667705-80667724 | None:intergenic | 50.0% | |
| ! | CCTGATGGGTCTAATCCAGA+AGG | + | chr7_1:80667708-80667727 | None:intergenic | 50.0% |
| ! | CCTTCTGGATTAGACCCATC+AGG | - | chr7_1:80667705-80667724 | Msa1042680:intron | 50.0% |
| !! | GGTTGACTCGGTTTCCTGAT+GGG | + | chr7_1:80667722-80667741 | None:intergenic | 50.0% |
| AACACCAGACCTAGCTGAAC+CGG | + | chr7_1:80667748-80667767 | None:intergenic | 50.0% | |
| ! | GGCCTAGGTTCATGTTTCTG+AGG | + | chr7_1:80667849-80667868 | None:intergenic | 50.0% |
| CAACCACGGTCACCACAATT+AGG | + | chr7_1:80667870-80667889 | None:intergenic | 50.0% | |
| ATTGTGGTGACCGTGGTTGT+TGG | - | chr7_1:80667871-80667890 | Msa1042680:intron | 50.0% | |
| AAGAGCAAGATCAACGGCTG+AGG | + | chr7_1:80667910-80667929 | None:intergenic | 50.0% | |
| ACAGCTTGCATTGCTCACTC+AGG | - | chr7_1:80667965-80667984 | Msa1042680:intron | 50.0% | |
| !! | CTGGTTTTTGGGAACTGGGA+AGG | - | chr7_1:80668172-80668191 | Msa1042680:CDS | 50.0% |
| GAAACAACTAGCGAGCATGG+TGG | - | chr7_1:80669240-80669259 | Msa1042680:intron | 50.0% | |
| GGGAACATGTGGTCCATAGT+TGG | + | chr7_1:80669327-80669346 | None:intergenic | 50.0% | |
| TGCTACAAGGTGGGAACATG+TGG | + | chr7_1:80669338-80669357 | None:intergenic | 50.0% | |
| CATTAAGGAGCGGCGTGATA+AGG | + | chr7_1:80669446-80669465 | None:intergenic | 50.0% | |
| !! | GTCTCATCCGACGGATTTTC+TGG | + | chr7_1:80669528-80669547 | None:intergenic | 50.0% |
| TTTCACAAGCTCGACGTCTG+AGG | + | chr7_1:80669563-80669582 | None:intergenic | 50.0% | |
| CGTCGAGCTTGTGAAACTCA+TGG | - | chr7_1:80669567-80669586 | Msa1042680:intron | 50.0% | |
| TGCAGCCGATGTTAACTTCC+CGG | - | chr7_1:80669687-80669706 | Msa1042680:intron | 50.0% | |
| ACCAGCCGGGAAGTTAACAT+CGG | + | chr7_1:80669695-80669714 | None:intergenic | 50.0% | |
| !! | TGTAGCGGAGTTTTACCCGT+TGG | + | chr7_1:80669718-80669737 | None:intergenic | 50.0% |
| GCTACATATTGCAGCGGAGA+TGG | - | chr7_1:80669732-80669751 | Msa1042680:intron | 50.0% | |
| !! | CTATTCAAAGGTGCTGTCCC+TGG | - | chr7_1:80669865-80669884 | Msa1042680:intron | 50.0% |
| GGATGCATGGAGGAGACTTT+AGG | - | chr7_1:80670686-80670705 | Msa1042680:exon | 50.0% | |
| ! | GAGGGGTATACCTGTTGGGA+TGG | + | chr7_1:80667310-80667329 | None:intergenic | 55.0% |
| !! | GGGTTGACTCGGTTTCCTGA+TGG | + | chr7_1:80667723-80667742 | None:intergenic | 55.0% |
| GGAAACCGAGTCAACCCATC+CGG | - | chr7_1:80667726-80667745 | Msa1042680:intron | 55.0% | |
| !! | CTGAACCGGATGGGTTGACT+CGG | + | chr7_1:80667734-80667753 | None:intergenic | 55.0% |
| TCAACCCATCCGGTTCAGCT+AGG | - | chr7_1:80667736-80667755 | Msa1042680:intron | 55.0% | |
| CAGACCTAGCTGAACCGGAT+GGG | + | chr7_1:80667743-80667762 | None:intergenic | 55.0% | |
| CGGTCACCACAATTAGGCCT+AGG | + | chr7_1:80667864-80667883 | None:intergenic | 55.0% | |
| AGGCCTAATTGTGGTGACCG+TGG | - | chr7_1:80667864-80667883 | Msa1042680:intron | 55.0% | |
| CGTGCACTAGCTGACTGTGT+TGG | + | chr7_1:80668791-80668810 | None:intergenic | 55.0% | |
| TAAGGAGCGGCGTGATAAGG+AGG | + | chr7_1:80669443-80669462 | None:intergenic | 55.0% | |
| ! | GGTGGTGAGGCATTAAGGAG+CGG | + | chr7_1:80669456-80669475 | None:intergenic | 55.0% |
| !! | TGGTGAGGATGATGGTGGTG+AGG | + | chr7_1:80669469-80669488 | None:intergenic | 55.0% |
| ! | CGTGATGGTGAGGATGATGG+TGG | + | chr7_1:80669474-80669493 | None:intergenic | 55.0% |
| ! | GGTCGTGATGGTGAGGATGA+TGG | + | chr7_1:80669477-80669496 | None:intergenic | 55.0% |
| ! | GTGAGATGGTCGTGATGGTG+AGG | + | chr7_1:80669484-80669503 | None:intergenic | 55.0% |
| ! | TAACTTCCCGGCTGGTCCAA+CGG | - | chr7_1:80669699-80669718 | Msa1042680:intron | 55.0% |
| ! | TTTTACCCGTTGGACCAGCC+GGG | + | chr7_1:80669708-80669727 | None:intergenic | 55.0% |
| ! | GTTTTACCCGTTGGACCAGC+CGG | + | chr7_1:80669709-80669728 | None:intergenic | 55.0% |
| GGAGATGGTCTCACCGGATA+TGG | - | chr7_1:80669747-80669766 | Msa1042680:intron | 55.0% | |
| GATGGTCTCACCGGATATGG+TGG | - | chr7_1:80669750-80669769 | Msa1042680:intron | 55.0% | |
| TCACATTCGGGTCAGCGTGA+TGG | + | chr7_1:80669789-80669808 | None:intergenic | 55.0% | |
| CCAGACCTAGCTGAACCGGA+TGG | + | chr7_1:80667744-80667763 | None:intergenic | 60.0% | |
| CCATCCGGTTCAGCTAGGTC+TGG | - | chr7_1:80667741-80667760 | Msa1042680:intron | 60.0% | |
| CAGCGGTGAGATGGTCGTGA+TGG | + | chr7_1:80669489-80669508 | None:intergenic | 60.0% | |
| GTCTTCAAGGTCGGCTGCAG+CGG | + | chr7_1:80669506-80669525 | None:intergenic | 60.0% | |
| CTCGACGTCTGAGGAGTCGA+GGG | + | chr7_1:80669554-80669573 | None:intergenic | 60.0% | |
| GGCTGCACCGAGTTCCAACA+AGG | + | chr7_1:80669674-80669693 | None:intergenic | 60.0% | |
| GCCGATGTTAACTTCCCGGC+TGG | - | chr7_1:80669691-80669710 | Msa1042680:intron | 60.0% | |
| ! | AACTTCCCGGCTGGTCCAAC+GGG | - | chr7_1:80669700-80669719 | Msa1042680:intron | 60.0% |
| TGCAGCGGAGATGGTCTCAC+CGG | - | chr7_1:80669741-80669760 | Msa1042680:intron | 60.0% | |
| TGTGGGCCAGACCCACCTTC+TGG | - | chr7_1:80667690-80667709 | Msa1042680:intron | 65.0% | |
| CGAGGGCTCGTCTCATCCGA+CGG | + | chr7_1:80669537-80669556 | None:intergenic | 65.0% | |
| GCTCGACGTCTGAGGAGTCG+AGG | + | chr7_1:80669555-80669574 | None:intergenic | 65.0% | |
| GGTCGGCTGCAGCGGTGAGA+TGG | + | chr7_1:80669498-80669517 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 80667305 | 80670910 | 80667305 | ID=Msa1042680;Name=Msa1042680 |
| chr7_1 | mRNA | 80667305 | 80670910 | 80667305 | ID=Msa1042680-mRNA-1;Parent=Msa1042680;Name=Msa1042680-mRNA-1;_AED=0.07;_eAED=0.07;_QI=223|1|1|1|0|0.33|3|353|482 |
| chr7_1 | exon | 80667305 | 80667640 | 80667305 | ID=Msa1042680-mRNA-1:exon:22038;Parent=Msa1042680-mRNA-1 |
| chr7_1 | exon | 80667968 | 80668974 | 80667968 | ID=Msa1042680-mRNA-1:exon:22037;Parent=Msa1042680-mRNA-1 |
| chr7_1 | exon | 80670229 | 80670910 | 80670229 | ID=Msa1042680-mRNA-1:exon:22036;Parent=Msa1042680-mRNA-1 |
| chr7_1 | five_prime_UTR | 80670688 | 80670910 | 80670688 | ID=Msa1042680-mRNA-1:five_prime_utr;Parent=Msa1042680-mRNA-1 |
| chr7_1 | CDS | 80670229 | 80670687 | 80670229 | ID=Msa1042680-mRNA-1:cds;Parent=Msa1042680-mRNA-1 |
| chr7_1 | CDS | 80667985 | 80668974 | 80667985 | ID=Msa1042680-mRNA-1:cds;Parent=Msa1042680-mRNA-1 |
| chr7_1 | three_prime_UTR | 80667968 | 80667984 | 80667968 | ID=Msa1042680-mRNA-1:three_prime_utr;Parent=Msa1042680-mRNA-1 |
| chr7_1 | three_prime_UTR | 80667305 | 80667640 | 80667305 | ID=Msa1042680-mRNA-1:three_prime_utr;Parent=Msa1042680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
