Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1044080 | XP_003612661.1 | 95.368 | 475 | 22 | 0 | 1 | 475 | 1 | 475 | 0.0 | 920 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1044080 | sp|Q84P24|4CLL6_ARATH | 58.170 | 459 | 180 | 4 | 18 | 475 | 22 | 469 | 0.0 | 532 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1044080 | G7K879 | 95.368 | 475 | 22 | 0 | 1 | 475 | 1 | 475 | 0.0 | 920 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0212310 | Msa1044080 | 0.805443 | 1.331754e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1044080 | MtrunA17_Chr5g0409791 | 95.368 | 475 | 22 | 0 | 1 | 475 | 1 | 475 | 0.0 | 920 |
Msa1044080 | MtrunA17_Chr5g0409771 | 81.263 | 475 | 76 | 2 | 1 | 475 | 1 | 462 | 0.0 | 781 |
Msa1044080 | MtrunA17_Chr4g0039791 | 79.036 | 477 | 85 | 3 | 2 | 475 | 4 | 468 | 0.0 | 742 |
Msa1044080 | MtrunA17_Chr8g0353341 | 41.822 | 483 | 272 | 6 | 12 | 490 | 8 | 485 | 4.17e-120 | 362 |
Msa1044080 | MtrunA17_Chr1g0157401 | 39.832 | 477 | 268 | 6 | 23 | 490 | 16 | 482 | 2.76e-112 | 343 |
Msa1044080 | MtrunA17_Chr1g0197391 | 42.431 | 469 | 234 | 11 | 21 | 475 | 27 | 473 | 2.90e-104 | 323 |
Msa1044080 | MtrunA17_Chr4g0028411 | 39.610 | 462 | 254 | 9 | 21 | 475 | 6 | 449 | 1.46e-98 | 307 |
Msa1044080 | MtrunA17_Chr2g0327341 | 37.179 | 468 | 264 | 9 | 26 | 482 | 10 | 458 | 9.98e-94 | 294 |
Msa1044080 | MtrunA17_Chr3g0116251 | 37.875 | 433 | 240 | 8 | 55 | 483 | 64 | 471 | 3.82e-92 | 291 |
Msa1044080 | MtrunA17_Chr3g0116271 | 37.995 | 429 | 240 | 7 | 59 | 483 | 67 | 473 | 1.95e-90 | 286 |
Msa1044080 | MtrunA17_Chr1g0180551 | 36.017 | 472 | 271 | 10 | 19 | 475 | 73 | 528 | 5.30e-88 | 282 |
Msa1044080 | MtrunA17_Chr1g0180541 | 35.408 | 466 | 278 | 7 | 19 | 475 | 4 | 455 | 4.02e-87 | 278 |
Msa1044080 | MtrunA17_Chr1g0186071 | 35.440 | 443 | 245 | 9 | 43 | 475 | 52 | 463 | 4.11e-73 | 241 |
Msa1044080 | MtrunA17_Chr3g0102411 | 30.977 | 481 | 308 | 10 | 16 | 491 | 3 | 464 | 4.19e-69 | 230 |
Msa1044080 | MtrunA17_Chr4g0000461 | 36.471 | 425 | 243 | 9 | 59 | 475 | 43 | 448 | 3.71e-68 | 228 |
Msa1044080 | MtrunA17_Chr4g0072561 | 33.724 | 427 | 253 | 10 | 59 | 475 | 49 | 455 | 1.47e-66 | 224 |
Msa1044080 | MtrunA17_Chr5g0395431 | 34.169 | 439 | 255 | 9 | 59 | 482 | 87 | 506 | 1.65e-65 | 222 |
Msa1044080 | MtrunA17_Chr1g0157431 | 37.901 | 343 | 196 | 6 | 21 | 358 | 20 | 350 | 1.68e-63 | 215 |
Msa1044080 | MtrunA17_Chr2g0334131 | 44.503 | 191 | 102 | 3 | 288 | 475 | 1 | 190 | 5.83e-41 | 148 |
Msa1044080 | MtrunA17_Chr6g0471921 | 28.638 | 426 | 270 | 12 | 69 | 485 | 32 | 432 | 2.57e-34 | 135 |
Msa1044080 | MtrunA17_Chr5g0433241 | 26.484 | 438 | 281 | 17 | 67 | 481 | 38 | 457 | 1.04e-25 | 110 |
Msa1044080 | MtrunA17_Chr2g0301671 | 25.173 | 433 | 270 | 12 | 81 | 481 | 58 | 468 | 2.31e-24 | 106 |
Msa1044080 | MtrunA17_Chr6g0471311 | 30.282 | 284 | 172 | 10 | 211 | 481 | 190 | 460 | 4.04e-22 | 99.8 |
Msa1044080 | MtrunA17_Chr4g0068151 | 26.168 | 428 | 252 | 13 | 78 | 468 | 55 | 455 | 4.97e-22 | 99.4 |
Msa1044080 | MtrunA17_Chr1g0160041 | 24.583 | 480 | 261 | 18 | 69 | 471 | 108 | 563 | 1.71e-21 | 98.2 |
Msa1044080 | MtrunA17_Chr3g0124631 | 24.477 | 478 | 268 | 15 | 69 | 471 | 106 | 565 | 1.96e-21 | 97.8 |
Msa1044080 | MtrunA17_Chr1g0205711 | 26.276 | 529 | 308 | 19 | 7 | 469 | 39 | 551 | 4.04e-21 | 97.1 |
Msa1044080 | MtrunA17_Chr5g0433231 | 29.225 | 284 | 175 | 10 | 211 | 481 | 188 | 458 | 1.58e-20 | 94.7 |
Msa1044080 | MtrunA17_Chr8g0370701 | 26.279 | 430 | 263 | 17 | 81 | 481 | 94 | 498 | 2.26e-19 | 91.3 |
Msa1044080 | MtrunA17_Chr5g0433221 | 27.171 | 449 | 269 | 17 | 65 | 481 | 36 | 458 | 5.72e-19 | 90.1 |
Msa1044080 | MtrunA17_Chr5g0396311 | 27.725 | 422 | 265 | 13 | 81 | 481 | 52 | 454 | 4.45e-18 | 87.0 |
Msa1044080 | MtrunA17_Chr3g0120731 | 26.190 | 336 | 170 | 13 | 202 | 471 | 272 | 595 | 2.12e-17 | 85.5 |
Msa1044080 | MtrunA17_Chr5g0396331 | 26.267 | 434 | 261 | 16 | 81 | 482 | 52 | 458 | 5.35e-17 | 83.6 |
Msa1044080 | MtrunA17_Chr2g0329161 | 27.986 | 293 | 173 | 12 | 211 | 472 | 671 | 956 | 7.08e-17 | 84.3 |
Msa1044080 | MtrunA17_Chr4g0033141 | 27.564 | 312 | 185 | 14 | 192 | 472 | 658 | 959 | 2.00e-16 | 82.8 |
Msa1044080 | MtrunA17_Chr2g0334121 | 31.609 | 174 | 107 | 4 | 59 | 229 | 44 | 208 | 8.06e-16 | 76.3 |
Msa1044080 | MtrunA17_Chr7g0252691 | 23.491 | 464 | 302 | 14 | 44 | 475 | 189 | 631 | 1.09e-15 | 80.1 |
Msa1044080 | MtrunA17_Chr3g0121951 | 33.974 | 156 | 87 | 5 | 348 | 491 | 460 | 611 | 3.61e-15 | 78.2 |
Msa1044080 | MtrunA17_Chr3g0121931 | 35.669 | 157 | 79 | 6 | 328 | 468 | 441 | 591 | 9.54e-15 | 77.0 |
Msa1044080 | MtrunA17_Chr8g0377991 | 35.000 | 140 | 75 | 4 | 339 | 468 | 461 | 594 | 6.72e-14 | 74.3 |
Msa1044080 | MtrunA17_Chr4g0028451 | 40.909 | 66 | 39 | 0 | 426 | 491 | 10 | 75 | 1.14e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1044080 | AT4G19010.1 | 58.170 | 459 | 180 | 4 | 18 | 475 | 22 | 469 | 0.0 | 532 |
Msa1044080 | AT1G20510.2 | 42.384 | 453 | 238 | 8 | 28 | 475 | 17 | 451 | 3.75e-120 | 360 |
Msa1044080 | AT1G20510.3 | 42.384 | 453 | 238 | 8 | 28 | 475 | 17 | 451 | 3.77e-120 | 360 |
Msa1044080 | AT1G20510.1 | 42.384 | 453 | 238 | 8 | 28 | 475 | 17 | 451 | 2.34e-119 | 361 |
Msa1044080 | AT1G20480.1 | 39.871 | 464 | 252 | 7 | 21 | 475 | 27 | 472 | 5.78e-109 | 335 |
Msa1044080 | AT1G20500.1 | 39.823 | 452 | 251 | 8 | 28 | 475 | 23 | 457 | 6.24e-103 | 319 |
Msa1044080 | AT4G05160.1 | 38.085 | 470 | 266 | 9 | 24 | 482 | 8 | 463 | 1.93e-98 | 307 |
Msa1044080 | AT5G38120.4 | 38.581 | 451 | 257 | 8 | 28 | 475 | 24 | 457 | 2.14e-98 | 305 |
Msa1044080 | AT5G38120.2 | 38.581 | 451 | 257 | 8 | 28 | 475 | 24 | 457 | 2.14e-98 | 305 |
Msa1044080 | AT5G38120.3 | 38.581 | 451 | 257 | 8 | 28 | 475 | 24 | 457 | 1.01e-97 | 304 |
Msa1044080 | AT5G38120.1 | 38.581 | 451 | 257 | 8 | 28 | 475 | 24 | 457 | 1.67e-97 | 305 |
Msa1044080 | AT5G63380.1 | 36.192 | 478 | 269 | 9 | 21 | 483 | 17 | 473 | 5.59e-94 | 296 |
Msa1044080 | AT1G20490.2 | 39.480 | 423 | 235 | 7 | 28 | 445 | 23 | 429 | 4.54e-93 | 290 |
Msa1044080 | AT1G20490.1 | 39.480 | 423 | 235 | 7 | 28 | 445 | 23 | 429 | 4.54e-93 | 290 |
Msa1044080 | AT3G21240.2 | 37.004 | 454 | 249 | 12 | 34 | 475 | 33 | 461 | 4.04e-80 | 258 |
Msa1044080 | AT3G21240.3 | 37.004 | 454 | 249 | 12 | 34 | 475 | 33 | 461 | 4.04e-80 | 258 |
Msa1044080 | AT3G21240.1 | 37.004 | 454 | 249 | 12 | 34 | 475 | 33 | 461 | 1.70e-79 | 258 |
Msa1044080 | AT3G21230.2 | 35.570 | 447 | 262 | 8 | 41 | 475 | 43 | 475 | 8.62e-73 | 239 |
Msa1044080 | AT3G21230.3 | 35.570 | 447 | 262 | 8 | 41 | 475 | 43 | 475 | 2.19e-72 | 239 |
Msa1044080 | AT3G21230.1 | 35.570 | 447 | 262 | 8 | 41 | 475 | 43 | 475 | 3.22e-72 | 239 |
Msa1044080 | AT1G51680.2 | 37.559 | 426 | 244 | 11 | 59 | 475 | 56 | 468 | 2.81e-71 | 235 |
Msa1044080 | AT1G51680.3 | 37.559 | 426 | 244 | 11 | 59 | 475 | 56 | 468 | 8.22e-71 | 235 |
Msa1044080 | AT1G51680.1 | 37.559 | 426 | 244 | 11 | 59 | 475 | 56 | 468 | 1.99e-70 | 234 |
Msa1044080 | AT1G65060.2 | 35.561 | 419 | 253 | 6 | 59 | 474 | 66 | 470 | 8.96e-69 | 228 |
Msa1044080 | AT1G65060.1 | 35.476 | 420 | 254 | 6 | 59 | 475 | 66 | 471 | 2.45e-68 | 229 |
Msa1044080 | AT1G62940.1 | 33.185 | 449 | 257 | 9 | 58 | 491 | 43 | 463 | 1.97e-62 | 213 |
Msa1044080 | AT3G21230.4 | 32.663 | 398 | 242 | 8 | 41 | 426 | 43 | 426 | 1.82e-48 | 173 |
Msa1044080 | AT3G48990.1 | 26.415 | 424 | 284 | 12 | 68 | 485 | 30 | 431 | 5.68e-28 | 117 |
Msa1044080 | AT1G77240.1 | 28.506 | 435 | 252 | 19 | 68 | 472 | 43 | 448 | 2.57e-25 | 109 |
Msa1044080 | AT1G65880.1 | 27.191 | 445 | 273 | 16 | 67 | 482 | 38 | 460 | 3.09e-25 | 109 |
Msa1044080 | AT1G21540.1 | 25.959 | 443 | 272 | 15 | 68 | 481 | 44 | 459 | 1.21e-24 | 107 |
Msa1044080 | AT5G27600.1 | 26.070 | 514 | 293 | 17 | 24 | 469 | 60 | 554 | 1.41e-24 | 107 |
Msa1044080 | AT3G16910.1 | 29.545 | 308 | 182 | 8 | 194 | 482 | 181 | 472 | 6.05e-24 | 105 |
Msa1044080 | AT1G30520.3 | 26.531 | 441 | 239 | 15 | 78 | 472 | 42 | 443 | 8.43e-24 | 104 |
Msa1044080 | AT1G30520.4 | 26.531 | 441 | 239 | 15 | 78 | 472 | 42 | 443 | 8.43e-24 | 104 |
Msa1044080 | AT5G16370.1 | 25.917 | 436 | 272 | 16 | 72 | 481 | 46 | 456 | 1.13e-23 | 104 |
Msa1044080 | AT1G30520.2 | 26.531 | 441 | 239 | 15 | 78 | 472 | 42 | 443 | 1.34e-23 | 104 |
Msa1044080 | AT1G30520.1 | 26.531 | 441 | 239 | 15 | 78 | 472 | 42 | 443 | 1.34e-23 | 104 |
Msa1044080 | AT1G64400.1 | 25.000 | 520 | 301 | 18 | 22 | 469 | 21 | 523 | 3.20e-23 | 103 |
Msa1044080 | AT1G21530.2 | 26.185 | 443 | 268 | 19 | 68 | 481 | 44 | 456 | 2.03e-21 | 97.8 |
Msa1044080 | AT1G21530.1 | 26.067 | 445 | 264 | 21 | 68 | 481 | 44 | 454 | 2.84e-21 | 97.4 |
Msa1044080 | AT5G16340.1 | 25.721 | 451 | 274 | 17 | 72 | 491 | 46 | 466 | 1.08e-20 | 95.5 |
Msa1044080 | AT1G66120.1 | 27.570 | 428 | 263 | 15 | 81 | 481 | 52 | 459 | 1.39e-20 | 95.5 |
Msa1044080 | AT1G75960.1 | 26.651 | 424 | 268 | 14 | 81 | 481 | 53 | 456 | 3.04e-20 | 94.4 |
Msa1044080 | AT1G77590.2 | 27.469 | 324 | 162 | 11 | 211 | 471 | 100 | 413 | 3.92e-20 | 94.0 |
Msa1044080 | AT1G20560.1 | 27.400 | 427 | 264 | 16 | 81 | 481 | 54 | 460 | 6.96e-20 | 93.2 |
Msa1044080 | AT4G23850.1 | 25.600 | 375 | 202 | 11 | 141 | 469 | 180 | 523 | 6.98e-20 | 93.6 |
Msa1044080 | AT1G77590.1 | 27.469 | 324 | 162 | 11 | 211 | 471 | 246 | 559 | 7.84e-20 | 93.2 |
Msa1044080 | AT2G17650.1 | 27.169 | 438 | 278 | 14 | 81 | 490 | 99 | 523 | 3.38e-19 | 91.3 |
Msa1044080 | AT3G05970.1 | 26.535 | 505 | 296 | 15 | 27 | 469 | 63 | 554 | 7.90e-19 | 90.1 |
Msa1044080 | AT5G36880.6 | 25.571 | 438 | 287 | 13 | 67 | 475 | 146 | 573 | 8.94e-19 | 90.1 |
Msa1044080 | AT5G36880.3 | 25.571 | 438 | 287 | 13 | 67 | 475 | 146 | 573 | 8.94e-19 | 90.1 |
Msa1044080 | AT5G36880.5 | 25.571 | 438 | 287 | 13 | 67 | 475 | 146 | 573 | 8.94e-19 | 90.1 |
Msa1044080 | AT5G36880.1 | 25.571 | 438 | 287 | 13 | 67 | 475 | 146 | 573 | 8.94e-19 | 90.1 |
Msa1044080 | AT5G36880.4 | 25.629 | 437 | 286 | 13 | 68 | 475 | 147 | 573 | 1.05e-18 | 89.7 |
Msa1044080 | AT5G36880.2 | 25.571 | 438 | 287 | 13 | 67 | 475 | 196 | 623 | 1.15e-18 | 89.7 |
Msa1044080 | AT3G16170.1 | 27.740 | 292 | 177 | 12 | 210 | 481 | 234 | 511 | 1.70e-17 | 85.9 |
Msa1044080 | AT1G20560.2 | 30.333 | 300 | 177 | 13 | 198 | 481 | 99 | 382 | 1.00e-16 | 83.2 |
Msa1044080 | AT3G23790.1 | 32.051 | 156 | 90 | 5 | 348 | 491 | 465 | 616 | 2.94e-13 | 72.8 |
Find 106 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTTCTGGTCTTCATAAAA+TGG | 0.181069 | 7_2:+2272081 | Msa1044080:CDS |
ATGGGATAGTAAATTGAATT+TGG | 0.204514 | 7_2:-2272139 | None:intergenic |
AAGGAAACAACATCGATAAA+AGG | 0.225166 | 7_2:-2271959 | None:intergenic |
GCCCTTATTGATTCCTCATC+TGG | 0.228419 | 7_2:+2272013 | Msa1044080:CDS |
ATGACATTGATGAGGCTATT+AGG | 0.229682 | 7_2:+2272710 | Msa1044080:CDS |
TATCAAATACAAGGGCTTTC+AGG | 0.237687 | 7_2:+2273770 | Msa1044080:CDS |
TTGCCGATGTTCCATTTATA+TGG | 0.273927 | 7_2:+2272625 | Msa1044080:CDS |
ACCTGTATAAAATCAACATT+AGG | 0.288055 | 7_2:-2272904 | None:intergenic |
TTAGTCAAATCCTTGGCTTC+TGG | 0.296472 | 7_2:+2272067 | Msa1044080:CDS |
TGCTACCGGATTATTGTCAT+TGG | 0.301910 | 7_2:+2272660 | Msa1044080:CDS |
ATAAAGAAGAATCTTATTTA+CGG | 0.307107 | 7_2:+2272406 | Msa1044080:CDS |
AGAGCGATAAACCATATAAA+TGG | 0.308944 | 7_2:-2272636 | None:intergenic |
AAAGCTCACCGCTGAGGCCT+GGG | 0.310423 | 7_2:-2273390 | None:intergenic |
CAAAGCTCACCGCTGAGGCC+TGG | 0.333831 | 7_2:-2273391 | None:intergenic |
CAGGCCTCAGCGGTGAGCTT+TGG | 0.348099 | 7_2:+2273392 | Msa1044080:CDS |
GATGGATATTTATATTTGTC+TGG | 0.362112 | 7_2:+2273732 | Msa1044080:CDS |
TAACAAATTTGAGTAAGAAA+TGG | 0.376318 | 7_2:-2272041 | None:intergenic |
TGACATTGATGAGGCTATTA+GGG | 0.377552 | 7_2:+2272711 | Msa1044080:CDS |
GTATTGGAGTGGACCACTTT+TGG | 0.391629 | 7_2:+2277567 | Msa1044080:CDS |
GCTGGTATACTATATTCTTC+TGG | 0.393544 | 7_2:+2272475 | Msa1044080:CDS |
GTGTCTTCTTGTTTAATAAC+CGG | 0.393788 | 7_2:-2272451 | None:intergenic |
AATAGAATTTACCATAAGTA+AGG | 0.398034 | 7_2:-2272381 | None:intergenic |
TCCCAGATGAGGAATCAATA+AGG | 0.401871 | 7_2:-2272015 | None:intergenic |
GCATTACAGATGAAGGGTAT+TGG | 0.415106 | 7_2:+2277551 | Msa1044080:intron |
TGCTGTGCCAGAAAATGAAA+TGG | 0.427789 | 7_2:+2272324 | Msa1044080:CDS |
GCTTCTGGTCTTCATAAAAT+GGG | 0.430989 | 7_2:+2272082 | Msa1044080:CDS |
GTCAATGCCGACAACATCAT+TGG | 0.431399 | 7_2:-2272772 | None:intergenic |
CCCTTATTGATTCCTCATCT+GGG | 0.431410 | 7_2:+2272014 | Msa1044080:CDS |
TGGAGGCAAAAGTGGTAGAT+TGG | 0.438591 | 7_2:+2273347 | Msa1044080:CDS |
CCTGTATAAAATCAACATTA+GGG | 0.441453 | 7_2:-2272903 | None:intergenic |
AAAGATGGTTGGCTACATAC+TGG | 0.442873 | 7_2:+2273687 | Msa1044080:CDS |
GCTACCGGATTATTGTCATT+GGG | 0.459661 | 7_2:+2272661 | Msa1044080:CDS |
TGTTTAATAACCGGCCTTTG+AGG | 0.466941 | 7_2:-2272442 | None:intergenic |
AGCGGTGAGCTTTGGTTGAG+TGG | 0.470188 | 7_2:+2273400 | Msa1044080:CDS |
AATCAACATTAGGGAAAGCT+TGG | 0.471169 | 7_2:-2272894 | None:intergenic |
GCACTATCACTTACCCTCAT+TGG | 0.472078 | 7_2:+2271876 | Msa1044080:CDS |
TGTTGTTCCAATGATGTTGT+CGG | 0.475822 | 7_2:+2272765 | Msa1044080:CDS |
ATAACACTCAATAGTACAAT+GGG | 0.478275 | 7_2:-2272157 | None:intergenic |
CTTTGATTTGCCTCAAAGGC+CGG | 0.478557 | 7_2:+2272432 | Msa1044080:CDS |
TTTCACAACTATTCCTCACT+AGG | 0.480714 | 7_2:+2273307 | Msa1044080:CDS |
CTATATTCTTCTGGTACTAC+AGG | 0.481197 | 7_2:+2272484 | Msa1044080:CDS |
GGTTTATCGCTCTTTGCTAC+CGG | 0.483340 | 7_2:+2272646 | Msa1044080:CDS |
AAGCTCACCGCTGAGGCCTG+GGG | 0.483974 | 7_2:-2273389 | None:intergenic |
GCGGTGAGCTTTGGTTGAGT+GGG | 0.484393 | 7_2:+2273401 | Msa1044080:CDS |
CCCAGATGAGGAATCAATAA+GGG | 0.484993 | 7_2:-2272014 | None:intergenic |
CCTTGAGTCTCAACCAAAAG+TGG | 0.485968 | 7_2:-2277580 | None:intergenic |
ATTTGATAATGTCTTTCAAA+CGG | 0.487340 | 7_2:-2273755 | None:intergenic |
TCATAGAAATCTTATTGCTA+TGG | 0.487900 | 7_2:+2272531 | Msa1044080:CDS |
GTTAACTTTAGTCAAATCCT+TGG | 0.487963 | 7_2:+2272060 | Msa1044080:CDS |
ACAGCAGTTTACAATCTCCT+AGG | 0.491169 | 7_2:+2271921 | Msa1044080:CDS |
ATTTCGCTAACACTACTAAG+AGG | 0.492190 | 7_2:-2272211 | None:intergenic |
AACAGCTAGATGCACAGTCT+TGG | 0.496252 | 7_2:-2272602 | None:intergenic |
CTATTGAGTGTTATGTATCT+AGG | 0.499995 | 7_2:+2272166 | Msa1044080:CDS |
TGTTAGCGAAATTCGTAAGC+AGG | 0.502850 | 7_2:+2272222 | Msa1044080:CDS |
CGATAAAAGGGTTGGTCGGA+AGG | 0.502966 | 7_2:-2271946 | None:intergenic |
CATAGGATACTTGAATAATG+AGG | 0.506502 | 7_2:+2273641 | Msa1044080:intron |
ATCAAGAAGTTAGAGTCATT+AGG | 0.508091 | 7_2:+2272289 | Msa1044080:CDS |
GGGTTGGTCGGAAGGTTCCT+AGG | 0.509288 | 7_2:-2271938 | None:intergenic |
GGTTATGGAATGACTGAGTC+GGG | 0.510519 | 7_2:+2273250 | Msa1044080:CDS |
AGGAAACAACATCGATAAAA+GGG | 0.516631 | 7_2:-2271958 | None:intergenic |
GGGTAAGTGATAGTGCTGTT+GGG | 0.518012 | 7_2:-2271869 | None:intergenic |
GAAAGACATTATCAAATACA+AGG | 0.519394 | 7_2:+2273761 | Msa1044080:CDS |
ATGTCAACAATTGATAAAGA+TGG | 0.520159 | 7_2:+2273672 | Msa1044080:CDS |
ACACTACTAAGAGGATTCAA+TGG | 0.522819 | 7_2:-2272202 | None:intergenic |
AGGGTAAGTGATAGTGCTGT+TGG | 0.525684 | 7_2:-2271870 | None:intergenic |
TTTATAGCTCCTTTGCTCAA+AGG | 0.526141 | 7_2:-2272862 | None:intergenic |
GTTCTACAATCGTTGTAATG+AGG | 0.530238 | 7_2:+2272683 | Msa1044080:CDS |
TCCAAACATGGAGGCAAAAG+TGG | 0.536470 | 7_2:+2273339 | Msa1044080:CDS |
CATAAAATGGGTGTTTCACA+AGG | 0.537350 | 7_2:+2272094 | Msa1044080:CDS |
TTCACAACTATTCCTCACTA+GGG | 0.540578 | 7_2:+2273308 | Msa1044080:CDS |
GGGTTATGGAATGACTGAGT+CGG | 0.541532 | 7_2:+2273249 | Msa1044080:intron |
GGTGCTGAGCCTTTGAGCAA+AGG | 0.542374 | 7_2:+2272853 | Msa1044080:CDS |
GTGACTTTGATTTGCCTCAA+AGG | 0.544155 | 7_2:+2272428 | Msa1044080:CDS |
AGAACCCAATGACAATAATC+CGG | 0.547525 | 7_2:-2272665 | None:intergenic |
ATGACTGAGTCGGGCGCAGT+AGG | 0.553182 | 7_2:+2273259 | Msa1044080:CDS |
ATTTATGCATTACAGATGAA+GGG | 0.560004 | 7_2:+2277545 | Msa1044080:intron |
AGTGGGCCTTCAATTATGAA+AGG | 0.573787 | 7_2:+2273418 | Msa1044080:CDS |
CAACAATTGATAAAGATGGT+TGG | 0.574233 | 7_2:+2273676 | Msa1044080:CDS |
CATAACACTCAATAGTACAA+TGG | 0.577708 | 7_2:-2272158 | None:intergenic |
AACAACATCGATAAAAGGGT+TGG | 0.578041 | 7_2:-2271954 | None:intergenic |
AGGGCTAAAACCCCGTCATG+AGG | 0.582643 | 7_2:-2271995 | None:intergenic |
AGCTCACCGCTGAGGCCTGG+GGG | 0.583783 | 7_2:-2273388 | None:intergenic |
AAAGACATTATCAAATACAA+GGG | 0.586533 | 7_2:+2273762 | Msa1044080:CDS |
AAACCATATAAATGGAACAT+CGG | 0.588130 | 7_2:-2272628 | None:intergenic |
AAAGTGGTAGATTGGAAAGG+TGG | 0.589367 | 7_2:+2273355 | Msa1044080:CDS |
TTTATGAAGACCAGAAGCCA+AGG | 0.591784 | 7_2:-2272077 | None:intergenic |
GGTAAGTGATAGTGCTGTTG+GGG | 0.602978 | 7_2:-2271868 | None:intergenic |
GGCATTGACAGCGAAGGCAA+AGG | 0.603341 | 7_2:+2272786 | Msa1044080:CDS |
CGTAAGCAGGTTAAAGAGTG+TGG | 0.604728 | 7_2:+2272235 | Msa1044080:CDS |
AGTTTAAGACATGTCTCTTG+CGG | 0.607812 | 7_2:+2272832 | Msa1044080:CDS |
AGGGTTGTTAGCTCCAAACA+TGG | 0.614345 | 7_2:+2273327 | Msa1044080:CDS |
GGTACTACAGGTGTGAGCAA+AGG | 0.618393 | 7_2:+2272496 | Msa1044080:CDS |
TTGACAGCGAAGGCAAAGGA+TGG | 0.620619 | 7_2:+2272790 | Msa1044080:CDS |
ATTAAACAAGAAGACACTGC+TGG | 0.621260 | 7_2:+2272457 | Msa1044080:CDS |
ACATCGATAAAAGGGTTGGT+CGG | 0.626589 | 7_2:-2271950 | None:intergenic |
GGGCTAAAACCCCGTCATGA+GGG | 0.628723 | 7_2:-2271994 | None:intergenic |
ACAGATGAAGGGTATTGGAG+TGG | 0.632426 | 7_2:+2277556 | Msa1044080:intron |
GCAAAAGTGGTAGATTGGAA+AGG | 0.636430 | 7_2:+2273352 | Msa1044080:CDS |
AGAAATGGAAGTCCCAGATG+AGG | 0.641379 | 7_2:-2272026 | None:intergenic |
TGGAGCTAACAACCCTAGTG+AGG | 0.644923 | 7_2:-2273320 | None:intergenic |
GAGGAAATATGACATTGATG+AGG | 0.657137 | 7_2:+2272702 | Msa1044080:CDS |
GTTGTCGGCATTGACAGCGA+AGG | 0.659388 | 7_2:+2272780 | Msa1044080:CDS |
TCAACCAAAGCTCACCGCTG+AGG | 0.662229 | 7_2:-2273396 | None:intergenic |
AGGATTCAATGGTGTAACAA+CGG | 0.680938 | 7_2:-2272191 | None:intergenic |
TCGGGCGCAGTAGGAACACG+CGG | 0.689165 | 7_2:+2273268 | Msa1044080:CDS |
GTTGTTAGCTCCAAACATGG+AGG | 0.741487 | 7_2:+2273330 | Msa1044080:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTATTTCTATTTAAAATTAA+GGG | + | chr7_2:2273940-2273959 | Msa1044080:intron | 10.0% |
!!! | TTTTAAAAAAAAAGCTAAAA+TGG | + | chr7_2:2274244-2274263 | Msa1044080:intron | 10.0% |
!!! | TTTTTATTAAGAATTGTATT+AGG | + | chr7_2:2274987-2275006 | Msa1044080:intron | 10.0% |
!!! | ATTGTTAATATATTTCATTT+TGG | - | chr7_2:2275098-2275117 | None:intergenic | 10.0% |
!! | TGATTAAATAAAAATATGTA+TGG | + | chr7_2:2276082-2276101 | Msa1044080:intron | 10.0% |
!!! | ATAAAGAAGAATCTTATTTA+CGG | + | chr7_2:2272406-2272425 | Msa1044080:CDS | 15.0% |
!!! | AAAAAATCAGTATTTTTACA+AGG | + | chr7_2:2273442-2273461 | Msa1044080:intron | 15.0% |
!!! | ATGAAATAAAGGAAAAATTT+TGG | - | chr7_2:2273624-2273643 | None:intergenic | 15.0% |
!!! | AAATTTTTCCTTTATTTCAT+AGG | + | chr7_2:2273624-2273643 | Msa1044080:intron | 15.0% |
!!! | GCTATTTCTATTTAAAATTA+AGG | + | chr7_2:2273939-2273958 | Msa1044080:intron | 15.0% |
!!! | TTTAAAATTAAGGGTATTTT+TGG | + | chr7_2:2273949-2273968 | Msa1044080:intron | 15.0% |
!!! | TTTTATTACCTTTATTTATG+TGG | - | chr7_2:2274093-2274112 | None:intergenic | 15.0% |
!! | AAAAAAAGAATAAAAGAGAA+CGG | - | chr7_2:2274166-2274185 | None:intergenic | 15.0% |
!!! | TTTTTAACCTTAGAATTTTA+TGG | + | chr7_2:2274190-2274209 | Msa1044080:intron | 15.0% |
!! | GAATATATTAGAAAAACATT+TGG | + | chr7_2:2274266-2274285 | Msa1044080:intron | 15.0% |
!! | AAAATAAAAATCGTTACAAA+AGG | + | chr7_2:2274380-2274399 | Msa1044080:intron | 15.0% |
!!! | TTTTTAAAAAGAATTTGGTA+TGG | - | chr7_2:2274712-2274731 | None:intergenic | 15.0% |
!! | TAAATATTATTTGCTTACAA+CGG | - | chr7_2:2274934-2274953 | None:intergenic | 15.0% |
!! | TAAGCAAATAATATTTATCT+GGG | + | chr7_2:2274937-2274956 | Msa1044080:intron | 15.0% |
!!! | TAATTTAGTCTAAAATGAAT+AGG | - | chr7_2:2275053-2275072 | None:intergenic | 15.0% |
!!! | TAATATGATTTTTAACCAAA+AGG | - | chr7_2:2275357-2275376 | None:intergenic | 15.0% |
!!! | TTTCTTTTTCTTCATTTTTT+TGG | + | chr7_2:2277264-2277283 | Msa1044080:intron | 15.0% |
!!! | TTCTTTTTCTTCATTTTTTT+GGG | + | chr7_2:2277265-2277284 | Msa1044080:intron | 15.0% |
!! | AATATTTATATGGATCTAAT+TGG | + | chr7_2:2277466-2277485 | Msa1044080:intron | 15.0% |
!! | TAACAAATTTGAGTAAGAAA+TGG | - | chr7_2:2272044-2272063 | None:intergenic | 20.0% |
!!! | TGTTTTTATAACCTTACTTA+TGG | + | chr7_2:2272370-2272389 | Msa1044080:CDS | 20.0% |
!! | AATAGAATTTACCATAAGTA+AGG | - | chr7_2:2272384-2272403 | None:intergenic | 20.0% |
!!! | TGTATGATTGTTTCTTTTTA+GGG | + | chr7_2:2273229-2273248 | Msa1044080:intron | 20.0% |
!!! | TTTTTACCTTTCATAATTGA+AGG | - | chr7_2:2273427-2273446 | None:intergenic | 20.0% |
!!! | TTTTGGTTAAGAATTTCAAA+TGG | - | chr7_2:2273607-2273626 | None:intergenic | 20.0% |
!!! | ATTGTTTATTTTGATCAAGA+TGG | + | chr7_2:2273714-2273733 | Msa1044080:CDS | 20.0% |
!!! | ATTTGATAATGTCTTTCAAA+CGG | - | chr7_2:2273758-2273777 | None:intergenic | 20.0% |
!! | AAAGACATTATCAAATACAA+GGG | + | chr7_2:2273762-2273781 | Msa1044080:CDS | 20.0% |
!!! | TCCATGTGTTATTTTATAAT+TGG | + | chr7_2:2273917-2273936 | Msa1044080:intron | 20.0% |
!!! | TTTTCTTAATTTTGGGTTAT+CGG | - | chr7_2:2274363-2274382 | None:intergenic | 20.0% |
!! | TTATCTCAAATTGGAAATTT+AGG | - | chr7_2:2274634-2274653 | None:intergenic | 20.0% |
!!! | GCGATTTTTTAAAAAGAATT+TGG | - | chr7_2:2274717-2274736 | None:intergenic | 20.0% |
!! | AAACAAAGAAATTGATCTTA+AGG | + | chr7_2:2274867-2274886 | Msa1044080:intron | 20.0% |
!! | AACAAAGAAATTGATCTTAA+GGG | + | chr7_2:2274868-2274887 | Msa1044080:intron | 20.0% |
!! | GTAAGCAAATAATATTTATC+TGG | + | chr7_2:2274936-2274955 | Msa1044080:intron | 20.0% |
!!! | AATTTAGCTTTTGGTTTTTA+TGG | - | chr7_2:2275263-2275282 | None:intergenic | 20.0% |
!!! | AAATACATCAATTTAGCTTT+TGG | - | chr7_2:2275272-2275291 | None:intergenic | 20.0% |
!!! | TGCAGTTTTTTTTTATTAAG+AGG | - | chr7_2:2275452-2275471 | None:intergenic | 20.0% |
!!! | TCATAATGACATTCTTTTTA+AGG | - | chr7_2:2275708-2275727 | None:intergenic | 20.0% |
!! | TTATAAGTTACTAGTCAATT+TGG | - | chr7_2:2275762-2275781 | None:intergenic | 20.0% |
!!! | AATTATTTTGATATTCGGTT+CGG | - | chr7_2:2276041-2276060 | None:intergenic | 20.0% |
!! | ATTAATTACTTGAGTATCAT+CGG | + | chr7_2:2276058-2276077 | Msa1044080:intron | 20.0% |
!! | TATGTATGGTAAAAACTATA+AGG | + | chr7_2:2276096-2276115 | Msa1044080:intron | 20.0% |
!! | ACATAAATTCCTACTAAATA+TGG | - | chr7_2:2277209-2277228 | None:intergenic | 20.0% |
!! | GAATTTATGTTATGAATGAT+TGG | + | chr7_2:2277219-2277238 | Msa1044080:intron | 20.0% |
! | ATGGGATAGTAAATTGAATT+TGG | - | chr7_2:2272142-2272161 | None:intergenic | 25.0% |
! | ATAACACTCAATAGTACAAT+GGG | - | chr7_2:2272160-2272179 | None:intergenic | 25.0% |
!! | TCTAACTTCTTGATATTTTC+GGG | - | chr7_2:2272283-2272302 | None:intergenic | 25.0% |
!! | CTCTAACTTCTTGATATTTT+CGG | - | chr7_2:2272284-2272303 | None:intergenic | 25.0% |
!! | TTCAAATCCATTTCATTTTC+TGG | - | chr7_2:2272334-2272353 | None:intergenic | 25.0% |
! | TCATAGAAATCTTATTGCTA+TGG | + | chr7_2:2272531-2272550 | Msa1044080:CDS | 25.0% |
! | AAACCATATAAATGGAACAT+CGG | - | chr7_2:2272631-2272650 | None:intergenic | 25.0% |
! | CCTGTATAAAATCAACATTA+GGG | - | chr7_2:2272906-2272925 | None:intergenic | 25.0% |
! | ACCTGTATAAAATCAACATT+AGG | - | chr7_2:2272907-2272926 | None:intergenic | 25.0% |
!! | CTAATTTTCTTTTTTCTCCA+AGG | - | chr7_2:2272936-2272955 | None:intergenic | 25.0% |
!!! | TTTTCTTTGTAATTGCTGTT+AGG | + | chr7_2:2273011-2273030 | Msa1044080:intron | 25.0% |
! | TGTGAATATGAATACCATAA+CGG | - | chr7_2:2273128-2273147 | None:intergenic | 25.0% |
! | CAAGTAAAGTTCAACTATTA+TGG | - | chr7_2:2273163-2273182 | None:intergenic | 25.0% |
! | AGTTGAACTTTACTTGTTTA+TGG | + | chr7_2:2273167-2273186 | Msa1044080:intron | 25.0% |
!!! | GTTGATTTCCTAGATTTTTA+AGG | + | chr7_2:2273197-2273216 | Msa1044080:intron | 25.0% |
!!! | CTGTATGATTGTTTCTTTTT+AGG | + | chr7_2:2273228-2273247 | Msa1044080:intron | 25.0% |
!!! | ATTGTTTCTTTTTAGGGTTA+TGG | + | chr7_2:2273235-2273254 | Msa1044080:intron | 25.0% |
! | TCAAGTATCCTATGAAATAA+AGG | - | chr7_2:2273635-2273654 | None:intergenic | 25.0% |
! | ATGTCAACAATTGATAAAGA+TGG | + | chr7_2:2273672-2273691 | Msa1044080:CDS | 25.0% |
! | GATGGATATTTATATTTGTC+TGG | + | chr7_2:2273732-2273751 | Msa1044080:CDS | 25.0% |
! | GAAAGACATTATCAAATACA+AGG | + | chr7_2:2273761-2273780 | Msa1044080:CDS | 25.0% |
! | GCCAATTATAAAATAACACA+TGG | - | chr7_2:2273921-2273940 | None:intergenic | 25.0% |
!! | ACCTTAGAATTTTATGGAAA+AGG | + | chr7_2:2274196-2274215 | Msa1044080:intron | 25.0% |
!! | ACCTTTTCCATAAAATTCTA+AGG | - | chr7_2:2274200-2274219 | None:intergenic | 25.0% |
! | AAGTTACATCAAATAACCAA+AGG | + | chr7_2:2274332-2274351 | Msa1044080:intron | 25.0% |
!!! | CTTAATCCATTTTCTTGTTT+AGG | - | chr7_2:2274409-2274428 | None:intergenic | 25.0% |
! | TTGCTTTCGATTATTATATG+TGG | - | chr7_2:2274435-2274454 | None:intergenic | 25.0% |
! | TCAGATCATTTATCTCAAAT+TGG | - | chr7_2:2274643-2274662 | None:intergenic | 25.0% |
! | AAAAATCGCAAGATAAAAAG+AGG | + | chr7_2:2274728-2274747 | Msa1044080:intron | 25.0% |
! | ACAAAGAAATTGATCTTAAG+GGG | + | chr7_2:2274869-2274888 | Msa1044080:intron | 25.0% |
! | CAAATAATATTTATCTGGGA+AGG | + | chr7_2:2274941-2274960 | Msa1044080:intron | 25.0% |
! | AAGTTAAGTTTCTATCTTAC+TGG | - | chr7_2:2275307-2275326 | None:intergenic | 25.0% |
! | GGACTTTATTCATAATCTAA+TGG | - | chr7_2:2275333-2275352 | None:intergenic | 25.0% |
!! | TATGATTTTTAACCAAAAGG+AGG | - | chr7_2:2275354-2275373 | None:intergenic | 25.0% |
!!! | TATTTGGTTTTCTTGTGTTT+GGG | - | chr7_2:2275399-2275418 | None:intergenic | 25.0% |
!!! | TTATTTGGTTTTCTTGTGTT+TGG | - | chr7_2:2275400-2275419 | None:intergenic | 25.0% |
! | GATCTCTTATGTATGTTATT+TGG | - | chr7_2:2275415-2275434 | None:intergenic | 25.0% |
!!! | TATTAAGAGGTTCTAAAATG+TGG | - | chr7_2:2275439-2275458 | None:intergenic | 25.0% |
!! | GTAATTTCTTCGACAATTTT+TGG | - | chr7_2:2275539-2275558 | None:intergenic | 25.0% |
! | AGAATGTCATTATGAGAAAT+AGG | + | chr7_2:2275713-2275732 | Msa1044080:intron | 25.0% |
! | TTAGAAATGGAATTTAGATC+CGG | - | chr7_2:2275810-2275829 | None:intergenic | 25.0% |
!!! | ATTATTTTGATATTCGGTTC+GGG | - | chr7_2:2276040-2276059 | None:intergenic | 25.0% |
! | ATATGCTATCTAGAGAAAAT+AGG | - | chr7_2:2276459-2276478 | None:intergenic | 25.0% |
! | CAAAATAACAATTTCGTTTG+TGG | - | chr7_2:2276496-2276515 | None:intergenic | 25.0% |
! | AGGATCAAAATATTGTTGTA+CGG | + | chr7_2:2276534-2276553 | Msa1044080:intron | 25.0% |
!!! | TCACTTTTGTAAACATATCA+TGG | + | chr7_2:2276568-2276587 | Msa1044080:intron | 25.0% |
!!! | TGTTTTGTTAAGAATCTTGT+TGG | + | chr7_2:2276888-2276907 | Msa1044080:intron | 25.0% |
! | ATATATATTAGCTAGATGAC+TGG | - | chr7_2:2277007-2277026 | None:intergenic | 25.0% |
! | AAACTTTATGCTGAAAATAG+AGG | + | chr7_2:2277116-2277135 | Msa1044080:intron | 25.0% |
! | AGATCTTATCCATATTTAGT+AGG | + | chr7_2:2277197-2277216 | Msa1044080:intron | 25.0% |
! | CACGTGATTGAATATTTATA+TGG | + | chr7_2:2277456-2277475 | Msa1044080:intron | 25.0% |
! | TATTTATGCATTACAGATGA+AGG | + | chr7_2:2277544-2277563 | Msa1044080:intron | 25.0% |
! | ATTTATGCATTACAGATGAA+GGG | + | chr7_2:2277545-2277564 | Msa1044080:intron | 25.0% |
!! | TTTTTGGTGAATACCAATGA+GGG | - | chr7_2:2271892-2271911 | None:intergenic | 30.0% |
AGGAAACAACATCGATAAAA+GGG | - | chr7_2:2271961-2271980 | None:intergenic | 30.0% | |
AAGGAAACAACATCGATAAA+AGG | - | chr7_2:2271962-2271981 | None:intergenic | 30.0% | |
GTTAACTTTAGTCAAATCCT+TGG | + | chr7_2:2272060-2272079 | Msa1044080:CDS | 30.0% | |
CATAACACTCAATAGTACAA+TGG | - | chr7_2:2272161-2272180 | None:intergenic | 30.0% | |
CTATTGAGTGTTATGTATCT+AGG | + | chr7_2:2272166-2272185 | Msa1044080:CDS | 30.0% | |
ATCAAGAAGTTAGAGTCATT+AGG | + | chr7_2:2272289-2272308 | Msa1044080:CDS | 30.0% | |
! | GTGTCTTCTTGTTTAATAAC+CGG | - | chr7_2:2272454-2272473 | None:intergenic | 30.0% |
AGAGCGATAAACCATATAAA+TGG | - | chr7_2:2272639-2272658 | None:intergenic | 30.0% | |
!!! | CCCTAATGTTGATTTTATAC+AGG | + | chr7_2:2272903-2272922 | Msa1044080:CDS | 30.0% |
TTTATACAGGTAAAGAACCT+TGG | + | chr7_2:2272916-2272935 | Msa1044080:intron | 30.0% | |
! | TGACTTGCGTTCTTTAATTA+AGG | - | chr7_2:2272959-2272978 | None:intergenic | 30.0% |
TTCATATTCACAACATGTTC+TGG | + | chr7_2:2273136-2273155 | Msa1044080:intron | 30.0% | |
CTTCACATCCTTAAAAATCT+AGG | - | chr7_2:2273208-2273227 | None:intergenic | 30.0% | |
AATCAATCTCATGCAAATGT+AGG | - | chr7_2:2273493-2273512 | None:intergenic | 30.0% | |
CATAGGATACTTGAATAATG+AGG | + | chr7_2:2273641-2273660 | Msa1044080:intron | 30.0% | |
CAACAATTGATAAAGATGGT+TGG | + | chr7_2:2273676-2273695 | Msa1044080:CDS | 30.0% | |
!!! | ATAGGACCTACTTTTTTTGA+AGG | - | chr7_2:2274059-2274078 | None:intergenic | 30.0% |
TATGTGGTGACAATGTTAAT+AGG | - | chr7_2:2274077-2274096 | None:intergenic | 30.0% | |
CATTGTCACCACATAAATAA+AGG | + | chr7_2:2274082-2274101 | Msa1044080:intron | 30.0% | |
CTTTCGATTATTATATGTGG+TGG | - | chr7_2:2274432-2274451 | None:intergenic | 30.0% | |
! | AAATTAAGTTGCAATGCTAC+TGG | - | chr7_2:2274483-2274502 | None:intergenic | 30.0% |
AAATTAAATGAAGAGCTGTG+CGG | + | chr7_2:2274590-2274609 | Msa1044080:intron | 30.0% | |
TCTCAAATTGGAAATTTAGG+TGG | - | chr7_2:2274631-2274650 | None:intergenic | 30.0% | |
CAATGGACAATTTAATCAGA+CGG | - | chr7_2:2274819-2274838 | None:intergenic | 30.0% | |
! | TCACTATCGTATTTCTACAA+TGG | - | chr7_2:2274836-2274855 | None:intergenic | 30.0% |
GATCAATAGAGTCATTCAAA+AGG | + | chr7_2:2275152-2275171 | Msa1044080:intron | 30.0% | |
TCTTTCCTCTTATCATCTAT+TGG | - | chr7_2:2275190-2275209 | None:intergenic | 30.0% | |
TTAAGTTTCTATCTTACTGG+TGG | - | chr7_2:2275304-2275323 | None:intergenic | 30.0% | |
! | TATGAATAAAGTCCTCCTTT+TGG | + | chr7_2:2275339-2275358 | Msa1044080:intron | 30.0% |
TTTCTTGTGTTTGGGTAATT+TGG | - | chr7_2:2275391-2275410 | None:intergenic | 30.0% | |
AAATAGTCAACAACACTTGA+AGG | + | chr7_2:2275474-2275493 | Msa1044080:intron | 30.0% | |
!!! | ACAATTTTTGGCAACATGTT+CGG | - | chr7_2:2275527-2275546 | None:intergenic | 30.0% |
!!! | GTTACTTTTCATGTTAACTG+TGG | - | chr7_2:2275839-2275858 | None:intergenic | 30.0% |
!!! | CTTATTTTTTATCAGACCTG+TGG | - | chr7_2:2275962-2275981 | None:intergenic | 30.0% |
!!! | TTTTTTGAGAGAGACAAAAG+AGG | - | chr7_2:2276425-2276444 | None:intergenic | 30.0% |
AATAACAATTTCGTTTGTGG+TGG | - | chr7_2:2276493-2276512 | None:intergenic | 30.0% | |
!! | ATTTTGATCCTCACAATAGT+AGG | - | chr7_2:2276525-2276544 | None:intergenic | 30.0% |
TGAGTCCAAGTGAAATATAT+GGG | - | chr7_2:2276670-2276689 | None:intergenic | 30.0% | |
TTGAGTCCAAGTGAAATATA+TGG | - | chr7_2:2276671-2276690 | None:intergenic | 30.0% | |
! | ACTGAACTAATTTTATGCTC+AGG | + | chr7_2:2276786-2276805 | Msa1044080:intron | 30.0% |
TTTGTTAAGAATCTTGTTGG+AGG | + | chr7_2:2276891-2276910 | Msa1044080:intron | 30.0% | |
!! | TGTTATGAATGATTGGTTTC+AGG | + | chr7_2:2277226-2277245 | Msa1044080:intron | 30.0% |
ATAAGTCACAACTAACCATT+TGG | + | chr7_2:2277513-2277532 | Msa1044080:intron | 30.0% | |
ATAAATAAGAGTCCACCAAA+TGG | - | chr7_2:2277531-2277550 | None:intergenic | 30.0% | |
!!! | GTTTTTGGTGAATACCAATG+AGG | - | chr7_2:2271893-2271912 | None:intergenic | 35.0% |
CATTGGTATTCACCAAAAAC+TGG | + | chr7_2:2271893-2271912 | Msa1044080:CDS | 35.0% | |
! | CTGCTGTAAATTCCAGTTTT+TGG | - | chr7_2:2271908-2271927 | None:intergenic | 35.0% |
AACAACATCGATAAAAGGGT+TGG | - | chr7_2:2271957-2271976 | None:intergenic | 35.0% | |
ATGAGGGTGAGAAAAAATGA+AGG | - | chr7_2:2271981-2272000 | None:intergenic | 35.0% | |
!!! | ATTTTTTCTCACCCTCATGA+CGG | + | chr7_2:2271983-2272002 | Msa1044080:CDS | 35.0% |
! | GCTTCTGGTCTTCATAAAAT+GGG | + | chr7_2:2272082-2272101 | Msa1044080:CDS | 35.0% |
CATAAAATGGGTGTTTCACA+AGG | + | chr7_2:2272094-2272113 | Msa1044080:CDS | 35.0% | |
AGGATTCAATGGTGTAACAA+CGG | - | chr7_2:2272194-2272213 | None:intergenic | 35.0% | |
ACACTACTAAGAGGATTCAA+TGG | - | chr7_2:2272205-2272224 | None:intergenic | 35.0% | |
ATTTCGCTAACACTACTAAG+AGG | - | chr7_2:2272214-2272233 | None:intergenic | 35.0% | |
ATTAAACAAGAAGACACTGC+TGG | + | chr7_2:2272457-2272476 | Msa1044080:CDS | 35.0% | |
GCTGGTATACTATATTCTTC+TGG | + | chr7_2:2272475-2272494 | Msa1044080:CDS | 35.0% | |
CTATATTCTTCTGGTACTAC+AGG | + | chr7_2:2272484-2272503 | Msa1044080:CDS | 35.0% | |
! | CTATGGTTGAGCTTTTTATG+AGG | + | chr7_2:2272548-2272567 | Msa1044080:CDS | 35.0% |
TTGCCGATGTTCCATTTATA+TGG | + | chr7_2:2272625-2272644 | Msa1044080:CDS | 35.0% | |
AGAACCCAATGACAATAATC+CGG | - | chr7_2:2272668-2272687 | None:intergenic | 35.0% | |
GTTCTACAATCGTTGTAATG+AGG | + | chr7_2:2272683-2272702 | Msa1044080:CDS | 35.0% | |
GAGGAAATATGACATTGATG+AGG | + | chr7_2:2272702-2272721 | Msa1044080:CDS | 35.0% | |
ATGACATTGATGAGGCTATT+AGG | + | chr7_2:2272710-2272729 | Msa1044080:CDS | 35.0% | |
TGACATTGATGAGGCTATTA+GGG | + | chr7_2:2272711-2272730 | Msa1044080:CDS | 35.0% | |
TGTTGTTCCAATGATGTTGT+CGG | + | chr7_2:2272765-2272784 | Msa1044080:CDS | 35.0% | |
! | AGTTTAAGACATGTCTCTTG+CGG | + | chr7_2:2272832-2272851 | Msa1044080:CDS | 35.0% |
TTTATAGCTCCTTTGCTCAA+AGG | - | chr7_2:2272865-2272884 | None:intergenic | 35.0% | |
AATCAACATTAGGGAAAGCT+TGG | - | chr7_2:2272897-2272916 | None:intergenic | 35.0% | |
GTTAGGAGCTAAATAAATGC+TGG | + | chr7_2:2273028-2273047 | Msa1044080:intron | 35.0% | |
TTTCACAACTATTCCTCACT+AGG | + | chr7_2:2273307-2273326 | Msa1044080:CDS | 35.0% | |
TTCACAACTATTCCTCACTA+GGG | + | chr7_2:2273308-2273327 | Msa1044080:CDS | 35.0% | |
! | AAAAAGGTACAAGTAGGCTA+AGG | - | chr7_2:2273564-2273583 | None:intergenic | 35.0% |
AATGGAATAGCAAAAGAGAC+AGG | - | chr7_2:2273589-2273608 | None:intergenic | 35.0% | |
TATCAAATACAAGGGCTTTC+AGG | + | chr7_2:2273770-2273789 | Msa1044080:CDS | 35.0% | |
TAAGGGCCTTCAAAAAAAGT+AGG | + | chr7_2:2274050-2274069 | Msa1044080:intron | 35.0% | |
! | AATTCTAAAGACTTCAGACC+AGG | + | chr7_2:2274129-2274148 | Msa1044080:intron | 35.0% |
GAAAAGGTTCTTCTATTCGA+AGG | + | chr7_2:2274212-2274231 | Msa1044080:intron | 35.0% | |
!! | ACAAGAAGTGCCAAAAGAAT+CGG | + | chr7_2:2274298-2274317 | Msa1044080:intron | 35.0% |
! | ACTCTTTTACCCGATTCTTT+TGG | - | chr7_2:2274311-2274330 | None:intergenic | 35.0% |
AGGACTCCTAAACAAGAAAA+TGG | + | chr7_2:2274400-2274419 | Msa1044080:intron | 35.0% | |
GCACAGCTCTTCATTTAATT+TGG | - | chr7_2:2274591-2274610 | None:intergenic | 35.0% | |
! | TTTGGTATGGTATTTCTACC+CGG | - | chr7_2:2274699-2274718 | None:intergenic | 35.0% |
TCGAACCAATAGATGATAAG+AGG | + | chr7_2:2275182-2275201 | Msa1044080:intron | 35.0% | |
! | CTTAGATCGTTCTCATGTTT+TGG | - | chr7_2:2275229-2275248 | None:intergenic | 35.0% |
! | TGGTTTTTATGGTTGATCGA+TGG | - | chr7_2:2275252-2275271 | None:intergenic | 35.0% |
GCATTGGATTGAATTCTCTT+CGG | - | chr7_2:2275505-2275524 | None:intergenic | 35.0% | |
CAAAGTTGAGAGTCTTGATT+AGG | + | chr7_2:2275611-2275630 | Msa1044080:intron | 35.0% | |
TCGTCTAAATACGTTATCCT+TGG | + | chr7_2:2275640-2275659 | Msa1044080:intron | 35.0% | |
TCTAAATACGTTATCCTTGG+TGG | + | chr7_2:2275643-2275662 | Msa1044080:intron | 35.0% | |
CTAAATACGTTATCCTTGGT+GGG | + | chr7_2:2275644-2275663 | Msa1044080:intron | 35.0% | |
CTTGACATTTGCTCAGAAAT+TGG | - | chr7_2:2275673-2275692 | None:intergenic | 35.0% | |
ATGAGAAATAGGATCCGAAA+TGG | + | chr7_2:2275724-2275743 | Msa1044080:intron | 35.0% | |
TGAGAAATAGGATCCGAAAT+GGG | + | chr7_2:2275725-2275744 | Msa1044080:intron | 35.0% | |
!! | GTTATTTGCTATTCTGTCTG+AGG | - | chr7_2:2275788-2275807 | None:intergenic | 35.0% |
CAGACAGAATAGCAAATAAC+CGG | + | chr7_2:2275788-2275807 | Msa1044080:intron | 35.0% | |
! | ACTGTGGTGATCTTTAGAAA+TGG | - | chr7_2:2275823-2275842 | None:intergenic | 35.0% |
! | TCTGAAAGAGACTTTAAGGA+GGG | - | chr7_2:2276006-2276025 | None:intergenic | 35.0% |
AAGGTCTGAAAGAGACTTTA+AGG | - | chr7_2:2276010-2276029 | None:intergenic | 35.0% | |
TGCAAATTCCTACTATTGTG+AGG | + | chr7_2:2276514-2276533 | Msa1044080:intron | 35.0% | |
ATATATGGGTGACTATGTAC+AGG | - | chr7_2:2276656-2276675 | None:intergenic | 35.0% | |
AGTCACCCATATATTTCACT+TGG | + | chr7_2:2276662-2276681 | Msa1044080:intron | 35.0% | |
CTTCACAGCAAGAATGAATT+TGG | + | chr7_2:2276717-2276736 | Msa1044080:intron | 35.0% | |
AAGAGTTATGAAGACCACTT+AGG | + | chr7_2:2277145-2277164 | Msa1044080:intron | 35.0% | |
!! | AATCACGTGCTTTTGAGAAA+GGG | - | chr7_2:2277445-2277464 | None:intergenic | 35.0% |
ACAGCAGTTTACAATCTCCT+AGG | + | chr7_2:2271921-2271940 | Msa1044080:CDS | 40.0% | |
! | ACATCGATAAAAGGGTTGGT+CGG | - | chr7_2:2271953-2271972 | None:intergenic | 40.0% |
!!! | TTTTTTCTCACCCTCATGAC+GGG | + | chr7_2:2271984-2272003 | Msa1044080:CDS | 40.0% |
CCCAGATGAGGAATCAATAA+GGG | - | chr7_2:2272017-2272036 | None:intergenic | 40.0% | |
!! | CCCTTATTGATTCCTCATCT+GGG | + | chr7_2:2272014-2272033 | Msa1044080:CDS | 40.0% |
TCCCAGATGAGGAATCAATA+AGG | - | chr7_2:2272018-2272037 | None:intergenic | 40.0% | |
TTAGTCAAATCCTTGGCTTC+TGG | + | chr7_2:2272067-2272086 | Msa1044080:CDS | 40.0% | |
TTTATGAAGACCAGAAGCCA+AGG | - | chr7_2:2272080-2272099 | None:intergenic | 40.0% | |
! | GGCTTCTGGTCTTCATAAAA+TGG | + | chr7_2:2272081-2272100 | Msa1044080:CDS | 40.0% |
TGTTAGCGAAATTCGTAAGC+AGG | + | chr7_2:2272222-2272241 | Msa1044080:CDS | 40.0% | |
!! | TTTTCTGGCACAGCAATAAC+AGG | - | chr7_2:2272319-2272338 | None:intergenic | 40.0% |
TGCTGTGCCAGAAAATGAAA+TGG | + | chr7_2:2272324-2272343 | Msa1044080:CDS | 40.0% | |
!! | GTGACTTTGATTTGCCTCAA+AGG | + | chr7_2:2272428-2272447 | Msa1044080:CDS | 40.0% |
TGTTTAATAACCGGCCTTTG+AGG | - | chr7_2:2272445-2272464 | None:intergenic | 40.0% | |
TGCTACCGGATTATTGTCAT+TGG | + | chr7_2:2272660-2272679 | Msa1044080:CDS | 40.0% | |
GCTACCGGATTATTGTCATT+GGG | + | chr7_2:2272661-2272680 | Msa1044080:CDS | 40.0% | |
! | ACACTATTTCTTCGCCGTTA+TGG | + | chr7_2:2273111-2273130 | Msa1044080:intron | 40.0% |
GCAAAAGTGGTAGATTGGAA+AGG | + | chr7_2:2273352-2273371 | Msa1044080:CDS | 40.0% | |
AAAGTGGTAGATTGGAAAGG+TGG | + | chr7_2:2273355-2273374 | Msa1044080:CDS | 40.0% | |
AGTGGGCCTTCAATTATGAA+AGG | + | chr7_2:2273418-2273437 | Msa1044080:CDS | 40.0% | |
! | CAGGCAAAAAAGGTACAAGT+AGG | - | chr7_2:2273570-2273589 | None:intergenic | 40.0% |
GCAAAAGAGACAGGCAAAAA+AGG | - | chr7_2:2273580-2273599 | None:intergenic | 40.0% | |
! | AAAGATGGTTGGCTACATAC+TGG | + | chr7_2:2273687-2273706 | Msa1044080:CDS | 40.0% |
! | AACCCAAAAGTGTGCTGAAA+GGG | + | chr7_2:2273984-2274003 | Msa1044080:intron | 40.0% |
TAAAGACTTCAGACCAGGAT+AGG | + | chr7_2:2274134-2274153 | Msa1044080:intron | 40.0% | |
! | CTTTTGGCACTTCTTGTGTT+GGG | - | chr7_2:2274295-2274314 | None:intergenic | 40.0% |
! | TCTTTTGGCACTTCTTGTGT+TGG | - | chr7_2:2274296-2274315 | None:intergenic | 40.0% |
!! | CAAGAAGTGCCAAAAGAATC+GGG | + | chr7_2:2274299-2274318 | Msa1044080:intron | 40.0% |
! | TTTCATGTGCATGAGGCATT+TGG | - | chr7_2:2274567-2274586 | None:intergenic | 40.0% |
!! | ATTTGGCTTTCATGTGCATG+AGG | - | chr7_2:2274574-2274593 | None:intergenic | 40.0% |
! | AAATGATCTGAAACTCGAGC+AGG | + | chr7_2:2274652-2274671 | Msa1044080:intron | 40.0% |
TTAACTCCCCAGATGCTTAA+GGG | - | chr7_2:2274908-2274927 | None:intergenic | 40.0% | |
!!! | TCGTTCTCATGTTTTGGCAT+TGG | - | chr7_2:2275223-2275242 | None:intergenic | 40.0% |
ACTCTCAACTTTGTGTGAGT+AGG | - | chr7_2:2275604-2275623 | None:intergenic | 40.0% | |
GGTTTCTCATTCACCCATTT+CGG | - | chr7_2:2275741-2275760 | None:intergenic | 40.0% | |
TTATCAGACCTGTGGTTAGA+GGG | - | chr7_2:2275954-2275973 | None:intergenic | 40.0% | |
TTTATCAGACCTGTGGTTAG+AGG | - | chr7_2:2275955-2275974 | None:intergenic | 40.0% | |
! | GTCTGAAAGAGACTTTAAGG+AGG | - | chr7_2:2276007-2276026 | None:intergenic | 40.0% |
ACTATGTACAGGAAAGAGAG+AGG | - | chr7_2:2276645-2276664 | None:intergenic | 40.0% | |
GTTAAGAATCTTGTTGGAGG+TGG | + | chr7_2:2276894-2276913 | Msa1044080:intron | 40.0% | |
TTGGAGGTGGAGAAAAGTAA+AGG | + | chr7_2:2276907-2276926 | Msa1044080:intron | 40.0% | |
TGGAGGTGGAGAAAAGTAAA+GGG | + | chr7_2:2276908-2276927 | Msa1044080:intron | 40.0% | |
CAGCTAGATTTCTTCCTAAG+TGG | - | chr7_2:2277162-2277181 | None:intergenic | 40.0% | |
TGAGAAAGGGTTAGGTTAAC+AGG | - | chr7_2:2277432-2277451 | None:intergenic | 40.0% | |
!! | CAATCACGTGCTTTTGAGAA+AGG | - | chr7_2:2277446-2277465 | None:intergenic | 40.0% |
AGTCACAACTAACCATTTGG+TGG | + | chr7_2:2277516-2277535 | Msa1044080:intron | 40.0% | |
! | GCATTACAGATGAAGGGTAT+TGG | + | chr7_2:2277551-2277570 | Msa1044080:intron | 40.0% |
! | GGTAAGTGATAGTGCTGTTG+GGG | - | chr7_2:2271871-2271890 | None:intergenic | 45.0% |
! | GGGTAAGTGATAGTGCTGTT+GGG | - | chr7_2:2271872-2271891 | None:intergenic | 45.0% |
! | AGGGTAAGTGATAGTGCTGT+TGG | - | chr7_2:2271873-2271892 | None:intergenic | 45.0% |
GCACTATCACTTACCCTCAT+TGG | + | chr7_2:2271876-2271895 | Msa1044080:CDS | 45.0% | |
! | TTTTTCTCACCCTCATGACG+GGG | + | chr7_2:2271985-2272004 | Msa1044080:CDS | 45.0% |
!! | GCCCTTATTGATTCCTCATC+TGG | + | chr7_2:2272013-2272032 | Msa1044080:CDS | 45.0% |
AGAAATGGAAGTCCCAGATG+AGG | - | chr7_2:2272029-2272048 | None:intergenic | 45.0% | |
CGTAAGCAGGTTAAAGAGTG+TGG | + | chr7_2:2272235-2272254 | Msa1044080:CDS | 45.0% | |
!! | CTTTGATTTGCCTCAAAGGC+CGG | + | chr7_2:2272432-2272451 | Msa1044080:CDS | 45.0% |
AACAGCTAGATGCACAGTCT+TGG | - | chr7_2:2272605-2272624 | None:intergenic | 45.0% | |
GGTTTATCGCTCTTTGCTAC+CGG | + | chr7_2:2272646-2272665 | Msa1044080:CDS | 45.0% | |
GTCAATGCCGACAACATCAT+TGG | - | chr7_2:2272775-2272794 | None:intergenic | 45.0% | |
GGGTTATGGAATGACTGAGT+CGG | + | chr7_2:2273249-2273268 | Msa1044080:intron | 45.0% | |
GGTTATGGAATGACTGAGTC+GGG | + | chr7_2:2273250-2273269 | Msa1044080:CDS | 45.0% | |
AGGGTTGTTAGCTCCAAACA+TGG | + | chr7_2:2273327-2273346 | Msa1044080:CDS | 45.0% | |
GTTGTTAGCTCCAAACATGG+AGG | + | chr7_2:2273330-2273349 | Msa1044080:CDS | 45.0% | |
TCCAAACATGGAGGCAAAAG+TGG | + | chr7_2:2273339-2273358 | Msa1044080:CDS | 45.0% | |
!! | ACCACTTTTGCCTCCATGTT+TGG | - | chr7_2:2273343-2273362 | None:intergenic | 45.0% |
TGGAGGCAAAAGTGGTAGAT+TGG | + | chr7_2:2273347-2273366 | Msa1044080:CDS | 45.0% | |
!! | CTTTCAGCACACTTTTGGGT+TGG | - | chr7_2:2273985-2274004 | None:intergenic | 45.0% |
! | CAACCCAAAAGTGTGCTGAA+AGG | + | chr7_2:2273983-2274002 | Msa1044080:intron | 45.0% |
! | ACCCAAAAGTGTGCTGAAAG+GGG | + | chr7_2:2273985-2274004 | Msa1044080:intron | 45.0% |
! | ACCCCTTTCAGCACACTTTT+GGG | - | chr7_2:2273989-2274008 | None:intergenic | 45.0% |
! | TACCCCTTTCAGCACACTTT+TGG | - | chr7_2:2273990-2274009 | None:intergenic | 45.0% |
AGAACGGAAGTTTCCTATCC+TGG | - | chr7_2:2274150-2274169 | None:intergenic | 45.0% | |
GAACTGTGGTAAAACCAAGC+CGG | + | chr7_2:2274677-2274696 | Msa1044080:intron | 45.0% | |
AACTGTGGTAAAACCAAGCC+GGG | + | chr7_2:2274678-2274697 | Msa1044080:intron | 45.0% | |
! | TATGGTATTTCTACCCGGCT+TGG | - | chr7_2:2274694-2274713 | None:intergenic | 45.0% |
AACGTGCATCTTTGTGTGGA+GGG | - | chr7_2:2274781-2274800 | None:intergenic | 45.0% | |
TAACGTGCATCTTTGTGTGG+AGG | - | chr7_2:2274782-2274801 | None:intergenic | 45.0% | |
TCCACACAAAGATGCACGTT+AGG | + | chr7_2:2274781-2274800 | Msa1044080:intron | 45.0% | |
TCCTAACGTGCATCTTTGTG+TGG | - | chr7_2:2274785-2274804 | None:intergenic | 45.0% | |
CTTGTTCCCCTTAAGCATCT+GGG | + | chr7_2:2274898-2274917 | Msa1044080:intron | 45.0% | |
TTGTTCCCCTTAAGCATCTG+GGG | + | chr7_2:2274899-2274918 | Msa1044080:intron | 45.0% | |
TAACTCCCCAGATGCTTAAG+GGG | - | chr7_2:2274907-2274926 | None:intergenic | 45.0% | |
GTTAACTCCCCAGATGCTTA+AGG | - | chr7_2:2274909-2274928 | None:intergenic | 45.0% | |
TTTGGCAACATGTTCGGCAT+TGG | - | chr7_2:2275521-2275540 | None:intergenic | 45.0% | |
GATGCGTAGGTTGTTTGTGT+GGG | - | chr7_2:2275903-2275922 | None:intergenic | 45.0% | |
AGATGCGTAGGTTGTTTGTG+TGG | - | chr7_2:2275904-2275923 | None:intergenic | 45.0% | |
TAACCTGAACCGGTCCTTAA+GGG | + | chr7_2:2275923-2275942 | Msa1044080:intron | 45.0% | |
! | GAAAGAGACTTTAAGGAGGG+TGG | - | chr7_2:2276003-2276022 | None:intergenic | 45.0% |
!! | ATTCGGTTCGGGAAAGAAGA+AGG | - | chr7_2:2276029-2276048 | None:intergenic | 45.0% |
AATTTCGTTTGTGGTGGTCG+CGG | - | chr7_2:2276487-2276506 | None:intergenic | 45.0% | |
! | CAGGAAAGAGAGAGGACTTT+TGG | - | chr7_2:2276637-2276656 | None:intergenic | 45.0% |
AGTAACTTTCCTTGCAGCAG+GGG | - | chr7_2:2276769-2276788 | None:intergenic | 45.0% | |
CAGTAACTTTCCTTGCAGCA+GGG | - | chr7_2:2276770-2276789 | None:intergenic | 45.0% | |
TCAGTAACTTTCCTTGCAGC+AGG | - | chr7_2:2276771-2276790 | None:intergenic | 45.0% | |
!! | CGTGCTTTTGAGAAAGGGTT+AGG | - | chr7_2:2277440-2277459 | None:intergenic | 45.0% |
!! | ACAGATGAAGGGTATTGGAG+TGG | + | chr7_2:2277556-2277575 | Msa1044080:intron | 45.0% |
! | GTATTGGAGTGGACCACTTT+TGG | + | chr7_2:2277567-2277586 | Msa1044080:CDS | 45.0% |
CCTTGAGTCTCAACCAAAAG+TGG | - | chr7_2:2277583-2277602 | None:intergenic | 45.0% | |
!! | CCACTTTTGGTTGAGACTCA+AGG | + | chr7_2:2277580-2277599 | Msa1044080:CDS | 45.0% |
!! | ATGTAAAAAAAAAATTATTA+AGG | + | chr7_2:2274032-2274051 | Msa1044080:intron | 5.0% |
!! | TGTAAAAAAAAAATTATTAA+GGG | + | chr7_2:2274033-2274052 | Msa1044080:intron | 5.0% |
!!! | TTTTTATTTTTCTTAATTTT+GGG | - | chr7_2:2274370-2274389 | None:intergenic | 5.0% |
!!! | ATTTTTATTTTTCTTAATTT+TGG | - | chr7_2:2274371-2274390 | None:intergenic | 5.0% |
!!! | TAATTAATTATTTTGATATT+CGG | - | chr7_2:2276046-2276065 | None:intergenic | 5.0% |
!!! | AGAATATAATTTTTTTTTAA+TGG | - | chr7_2:2277323-2277342 | None:intergenic | 5.0% |
!!! | AAAAAATTATATTCTTTTTT+TGG | + | chr7_2:2277328-2277347 | Msa1044080:intron | 5.0% |
!! | CGATAAAAGGGTTGGTCGGA+AGG | - | chr7_2:2271949-2271968 | None:intergenic | 50.0% |
GGTACTACAGGTGTGAGCAA+AGG | + | chr7_2:2272496-2272515 | Msa1044080:CDS | 50.0% | |
TTGACAGCGAAGGCAAAGGA+TGG | + | chr7_2:2272790-2272809 | Msa1044080:CDS | 50.0% | |
TGGAGCTAACAACCCTAGTG+AGG | - | chr7_2:2273323-2273342 | None:intergenic | 50.0% | |
!! | TGGGTTATCGGCTTGACCTT+TGG | - | chr7_2:2274351-2274370 | None:intergenic | 50.0% |
TGTTCGCGTCTTTCAGCATC+AGG | - | chr7_2:2274533-2274552 | None:intergenic | 50.0% | |
AACTCGAGCAGGATGAACTG+TGG | + | chr7_2:2274663-2274682 | Msa1044080:intron | 50.0% | |
GGAGGGTTGTGGTAAACATG+AGG | - | chr7_2:2274764-2274783 | None:intergenic | 50.0% | |
CATCTTTGTGTGGAGGGTTG+TGG | - | chr7_2:2274775-2274794 | None:intergenic | 50.0% | |
GATGCTTAAGGGGAACAAGG+AGG | - | chr7_2:2274897-2274916 | None:intergenic | 50.0% | |
CCAGATGCTTAAGGGGAACA+AGG | - | chr7_2:2274900-2274919 | None:intergenic | 50.0% | |
CCTTGTTCCCCTTAAGCATC+TGG | + | chr7_2:2274897-2274916 | Msa1044080:intron | 50.0% | |
! | CAGAAATTGGCTTCCCACCA+AGG | - | chr7_2:2275660-2275679 | None:intergenic | 50.0% |
AGGTTGTTTGTGTGGGAGGA+GGG | - | chr7_2:2275896-2275915 | None:intergenic | 50.0% | |
TAGGTTGTTTGTGTGGGAGG+AGG | - | chr7_2:2275897-2275916 | None:intergenic | 50.0% | |
CCTACGCATCTAACCTGAAC+CGG | + | chr7_2:2275913-2275932 | Msa1044080:intron | 50.0% | |
CTAACCTGAACCGGTCCTTA+AGG | + | chr7_2:2275922-2275941 | Msa1044080:intron | 50.0% | |
AACCTGAACCGGTCCTTAAG+GGG | + | chr7_2:2275924-2275943 | Msa1044080:intron | 50.0% | |
!! | GTTAGAGGGTGTTCCCCTTA+AGG | - | chr7_2:2275940-2275959 | None:intergenic | 50.0% |
! | GAGACTTTAAGGAGGGTGGT+GGG | - | chr7_2:2275999-2276018 | None:intergenic | 50.0% |
! | AGAGACTTTAAGGAGGGTGG+TGG | - | chr7_2:2276000-2276019 | None:intergenic | 50.0% |
GTAACTTTCCTTGCAGCAGG+GGG | - | chr7_2:2276768-2276787 | None:intergenic | 50.0% | |
GGGCTAAAACCCCGTCATGA+GGG | - | chr7_2:2271997-2272016 | None:intergenic | 55.0% | |
AGGGCTAAAACCCCGTCATG+AGG | - | chr7_2:2271998-2272017 | None:intergenic | 55.0% | |
!! | GTTGTCGGCATTGACAGCGA+AGG | + | chr7_2:2272780-2272799 | Msa1044080:CDS | 55.0% |
!! | GGCATTGACAGCGAAGGCAA+AGG | + | chr7_2:2272786-2272805 | Msa1044080:CDS | 55.0% |
! | GGTGCTGAGCCTTTGAGCAA+AGG | + | chr7_2:2272853-2272872 | Msa1044080:CDS | 55.0% |
! | GGTGGTAAGTTTTTGCCCCC+AGG | + | chr7_2:2273373-2273392 | Msa1044080:CDS | 55.0% |
TCAACCAAAGCTCACCGCTG+AGG | - | chr7_2:2273399-2273418 | None:intergenic | 55.0% | |
! | AGCGGTGAGCTTTGGTTGAG+TGG | + | chr7_2:2273400-2273419 | Msa1044080:CDS | 55.0% |
! | GCGGTGAGCTTTGGTTGAGT+GGG | + | chr7_2:2273401-2273420 | Msa1044080:CDS | 55.0% |
TCGCGTCTTTCAGCATCAGG+AGG | - | chr7_2:2274530-2274549 | None:intergenic | 55.0% | |
TGTGGGAGGAGGGGTTGTTA+GGG | - | chr7_2:2275886-2275905 | None:intergenic | 55.0% | |
GGTTGTTTGTGTGGGAGGAG+GGG | - | chr7_2:2275895-2275914 | None:intergenic | 55.0% | |
GCGTAGGTTGTTTGTGTGGG+AGG | - | chr7_2:2275900-2275919 | None:intergenic | 55.0% | |
! | CCGGTTCAGGTTAGATGCGT+AGG | - | chr7_2:2275916-2275935 | None:intergenic | 55.0% |
! | TTCCCCTTAAGGACCGGTTC+AGG | - | chr7_2:2275929-2275948 | None:intergenic | 55.0% |
! | AGGGTGTTCCCCTTAAGGAC+CGG | - | chr7_2:2275935-2275954 | None:intergenic | 55.0% |
!! | TAAGGAGGGTGGTGGGTGAT+GGG | - | chr7_2:2275992-2276011 | None:intergenic | 55.0% |
!! | TTAAGGAGGGTGGTGGGTGA+TGG | - | chr7_2:2275993-2276012 | None:intergenic | 55.0% |
CTTGCAGCAGGGGGATTGAT+TGG | - | chr7_2:2276759-2276778 | None:intergenic | 55.0% | |
CAATCAATCCCCCTGCTGCA+AGG | + | chr7_2:2276757-2276776 | Msa1044080:intron | 55.0% | |
!! | GGGTTGGTCGGAAGGTTCCT+AGG | - | chr7_2:2271941-2271960 | None:intergenic | 60.0% |
ATGACTGAGTCGGGCGCAGT+AGG | + | chr7_2:2273259-2273278 | Msa1044080:CDS | 60.0% | |
! | TTTTTGCCCCCAGGCCTCAG+CGG | + | chr7_2:2273382-2273401 | Msa1044080:CDS | 60.0% |
AAAGCTCACCGCTGAGGCCT+GGG | - | chr7_2:2273393-2273412 | None:intergenic | 60.0% | |
! | GGGGTTGTTAGGGGAGTGCA+GGG | - | chr7_2:2275876-2275895 | None:intergenic | 60.0% |
! | AGGGGTTGTTAGGGGAGTGC+AGG | - | chr7_2:2275877-2275896 | None:intergenic | 60.0% |
GTGGGAGGAGGGGTTGTTAG+GGG | - | chr7_2:2275885-2275904 | None:intergenic | 60.0% | |
GTGTGGGAGGAGGGGTTGTT+AGG | - | chr7_2:2275887-2275906 | None:intergenic | 60.0% | |
GGGGAACACCCTCTAACCAC+AGG | + | chr7_2:2275943-2275962 | Msa1044080:intron | 60.0% | |
TCGGGCGCAGTAGGAACACG+CGG | + | chr7_2:2273268-2273287 | Msa1044080:CDS | 65.0% | |
AAGCTCACCGCTGAGGCCTG+GGG | - | chr7_2:2273392-2273411 | None:intergenic | 65.0% | |
CAAAGCTCACCGCTGAGGCC+TGG | - | chr7_2:2273394-2273413 | None:intergenic | 65.0% | |
CAGGCCTCAGCGGTGAGCTT+TGG | + | chr7_2:2273392-2273411 | Msa1044080:CDS | 65.0% | |
AGCTCACCGCTGAGGCCTGG+GGG | - | chr7_2:2273391-2273410 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 2271839 | 2277616 | 2271839 | ID=Msa1044080;Name=Msa1044080 |
chr7_2 | mRNA | 2271839 | 2277616 | 2271839 | ID=Msa1044080-mRNA-1;Parent=Msa1044080;Name=Msa1044080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|0.75|1|1|4|0|492 |
chr7_2 | exon | 2271839 | 2272924 | 2271839 | ID=Msa1044080-mRNA-1:exon:520;Parent=Msa1044080-mRNA-1 |
chr7_2 | exon | 2273250 | 2273439 | 2273250 | ID=Msa1044080-mRNA-1:exon:521;Parent=Msa1044080-mRNA-1 |
chr7_2 | exon | 2273646 | 2273791 | 2273646 | ID=Msa1044080-mRNA-1:exon:522;Parent=Msa1044080-mRNA-1 |
chr7_2 | exon | 2277560 | 2277616 | 2277560 | ID=Msa1044080-mRNA-1:exon:523;Parent=Msa1044080-mRNA-1 |
chr7_2 | CDS | 2271839 | 2272924 | 2271839 | ID=Msa1044080-mRNA-1:cds;Parent=Msa1044080-mRNA-1 |
chr7_2 | CDS | 2273250 | 2273439 | 2273250 | ID=Msa1044080-mRNA-1:cds;Parent=Msa1044080-mRNA-1 |
chr7_2 | CDS | 2273646 | 2273791 | 2273646 | ID=Msa1044080-mRNA-1:cds;Parent=Msa1044080-mRNA-1 |
chr7_2 | CDS | 2277560 | 2277616 | 2277560 | ID=Msa1044080-mRNA-1:cds;Parent=Msa1044080-mRNA-1 |
Gene Sequence |
Protein sequence |