Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045070 | XP_039683301.1 | 86.969 | 353 | 20 | 3 | 1 | 327 | 37 | 389 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045070 | sp|Q8VWF8|RPOT2_NICSY | 42.045 | 352 | 109 | 16 | 1 | 318 | 35 | 325 | 2.60e-59 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045070 | A0A396H096 | 86.969 | 353 | 20 | 3 | 1 | 327 | 37 | 389 | 0.0 | 589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0330310 | Msa1045070 | 0.804300 | 2.308377e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045070 | MtrunA17_Chr7g0220451 | 86.969 | 353 | 20 | 3 | 1 | 327 | 37 | 389 | 0.0 | 589 |
| Msa1045070 | MtrunA17_Chr8g0366031 | 44.589 | 231 | 86 | 6 | 97 | 317 | 81 | 279 | 1.92e-43 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045070 | AT1G68990.2 | 42.489 | 233 | 96 | 6 | 86 | 309 | 64 | 267 | 5.05e-45 | 164 |
| Msa1045070 | AT1G68990.1 | 42.489 | 233 | 96 | 6 | 86 | 309 | 64 | 267 | 5.74e-45 | 164 |
| Msa1045070 | AT5G15700.1 | 38.218 | 348 | 131 | 13 | 1 | 327 | 40 | 324 | 4.32e-40 | 150 |
| Msa1045070 | AT5G15700.2 | 36.919 | 344 | 141 | 14 | 1 | 327 | 40 | 324 | 4.34e-40 | 150 |
| Msa1045070 | AT2G24120.2 | 46.541 | 159 | 69 | 4 | 180 | 327 | 158 | 311 | 9.92e-36 | 137 |
| Msa1045070 | AT2G24120.1 | 46.541 | 159 | 69 | 4 | 180 | 327 | 158 | 311 | 1.01e-35 | 137 |
Find 60 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGTTAGTTGAGAATTT+TGG | 0.183070 | 7_2:-4243507 | Msa1045070:CDS |
| TGACTTCATGTAAGGCAAAT+TGG | 0.205615 | 7_2:+4242969 | None:intergenic |
| TGTAACTTTGGGAAGGAAAT+TGG | 0.217318 | 7_2:-4243555 | Msa1045070:CDS |
| CAAACCTTTACATACTTGTT+TGG | 0.266598 | 7_2:+4243653 | None:intergenic |
| GGTTAGAATACACAAGTTCT+TGG | 0.342488 | 7_2:-4241968 | Msa1045070:CDS |
| TAAAGAGTTGTTGGAGGAGA+TGG | 0.356164 | 7_2:-4243286 | Msa1045070:CDS |
| GACTTCATGTAAGGCAAATT+GGG | 0.399449 | 7_2:+4242970 | None:intergenic |
| GAGCAAGAGATGTATCGAAA+TGG | 0.408230 | 7_2:-4242901 | Msa1045070:CDS |
| AGTAATTACAGCCATCTTAT+CGG | 0.433035 | 7_2:+4242834 | None:intergenic |
| GAAGAGAGGAAGCAGAATGC+TGG | 0.433295 | 7_2:-4243132 | Msa1045070:CDS |
| TGATGAAATTAAAGAGTTGT+TGG | 0.436703 | 7_2:-4243295 | Msa1045070:CDS |
| TTTGGCAGAGGGGAAATATA+AGG | 0.437602 | 7_2:-4243094 | Msa1045070:CDS |
| TTGATGGCGGGAAGTGAGAA+AGG | 0.445487 | 7_2:-4242790 | Msa1045070:CDS |
| TGGGTTCAAGTGGCATGGTT+TGG | 0.449115 | 7_2:-4243112 | Msa1045070:CDS |
| CTGTCTCACCTCTTGCTCAA+TGG | 0.450545 | 7_2:+4242717 | None:intergenic |
| AGATGGAGAGAGAAGATAAG+AGG | 0.456540 | 7_2:-4243269 | Msa1045070:CDS |
| TAAGATGATGGCGTTGTTGA+TGG | 0.458511 | 7_2:-4242806 | Msa1045070:CDS |
| AGCAAGAGATGTATCGAAAT+GGG | 0.460164 | 7_2:-4242900 | Msa1045070:CDS |
| TCAGTTGCCATCCGATAAGA+TGG | 0.470842 | 7_2:-4242845 | Msa1045070:CDS |
| AGAAACAATGACTTCATGTA+AGG | 0.491431 | 7_2:+4242961 | None:intergenic |
| TTGTTCGCAATTTGATACAA+AGG | 0.494996 | 7_2:-4243475 | Msa1045070:CDS |
| AAGAGAGGAAGCAGAATGCT+GGG | 0.500594 | 7_2:-4243131 | Msa1045070:CDS |
| CAAGTGGCATGGTTTGGCAG+AGG | 0.500667 | 7_2:-4243106 | Msa1045070:CDS |
| GTTTCCAAACAAGTATGTAA+AGG | 0.503435 | 7_2:-4243657 | Msa1045070:CDS |
| TGAAATTAAAGAGTTGTTGG+AGG | 0.506233 | 7_2:-4243292 | Msa1045070:CDS |
| TGTTCGCAATTTGATACAAA+GGG | 0.506503 | 7_2:-4243474 | Msa1045070:CDS |
| TGGCACTGCTAGGGTTGTAC+AGG | 0.507605 | 7_2:-4242761 | Msa1045070:CDS |
| GATGGCAACTGAAGAAAGTA+AGG | 0.511997 | 7_2:+4242856 | None:intergenic |
| AAGGATTCGTTGGCACTGCT+AGG | 0.525342 | 7_2:-4242771 | Msa1045070:CDS |
| AATTACTATGCATAAGATGA+TGG | 0.525392 | 7_2:-4242818 | Msa1045070:CDS |
| TTTGAGAGAAAACAAGAGGT+GGG | 0.534789 | 7_2:+4243610 | None:intergenic |
| AGGATTCGTTGGCACTGCTA+GGG | 0.536168 | 7_2:-4242770 | Msa1045070:CDS |
| TATGTAAAGGTTTGTTACGT+CGG | 0.536865 | 7_2:-4243644 | Msa1045070:CDS |
| AGGAGATGAAGAGAGAAGAG+AGG | 0.540461 | 7_2:-4243146 | Msa1045070:CDS |
| GGAAGTGAGAAAGGATTCGT+TGG | 0.546351 | 7_2:-4242781 | Msa1045070:CDS |
| TTTGGGAAGGAAATTGGAAG+TGG | 0.547649 | 7_2:-4243549 | Msa1045070:CDS |
| TGAAGATTGAGACTGAACTT+TGG | 0.553495 | 7_2:-4243053 | Msa1045070:CDS |
| AAGTGGCATGGTTTGGCAGA+GGG | 0.555346 | 7_2:-4243105 | Msa1045070:CDS |
| AGGGGAAATATAAGGAGTTG+AGG | 0.558326 | 7_2:-4243086 | Msa1045070:CDS |
| CTACTGATGTTGAGGATGAG+AGG | 0.562882 | 7_2:-4243422 | Msa1045070:intron |
| GGAAATTGGAAGTGGGCGTG+TGG | 0.563263 | 7_2:-4243541 | Msa1045070:CDS |
| AGCAGAATGCTGGGTTCAAG+TGG | 0.569157 | 7_2:-4243122 | Msa1045070:CDS |
| TGTATCGAAATGGGAAGAAG+AGG | 0.574216 | 7_2:-4242891 | Msa1045070:CDS |
| GTACAGGCCGTGTGCAGTGT+AGG | 0.578661 | 7_2:-4242745 | Msa1045070:CDS |
| AGGTGATTCCATTGAGCAAG+AGG | 0.585709 | 7_2:-4242725 | Msa1045070:intron |
| AATGCTGGGTTCAAGTGGCA+TGG | 0.588175 | 7_2:-4243117 | Msa1045070:CDS |
| GGGTTATTCTAGTGTTGCTG+AGG | 0.590458 | 7_2:-4243454 | Msa1045070:CDS |
| GGATATGTGTGAACAGAAGT+TGG | 0.597879 | 7_2:-4242995 | Msa1045070:CDS |
| AACTTTGGCAAGAAGCTGCG+AGG | 0.599182 | 7_2:-4243038 | Msa1045070:CDS |
| ATGATGGCGTTGTTGATGGC+GGG | 0.613550 | 7_2:-4242802 | Msa1045070:CDS |
| AGTGGCATGGTTTGGCAGAG+GGG | 0.613800 | 7_2:-4243104 | Msa1045070:CDS |
| GCATTTCATCAAACATGTGG+CGG | 0.613861 | 7_2:-4243683 | None:intergenic |
| GGAATCACCTACACTGCACA+CGG | 0.614870 | 7_2:+4242738 | None:intergenic |
| ATTACAGCCATCTTATCGGA+TGG | 0.617600 | 7_2:+4242838 | None:intergenic |
| TTGGGAAGGAAATTGGAAGT+GGG | 0.628080 | 7_2:-4243548 | Msa1045070:CDS |
| ACTTTGGCAAGAAGCTGCGA+GGG | 0.634491 | 7_2:-4243037 | Msa1045070:CDS |
| GATGATGGCGTTGTTGATGG+CGG | 0.640272 | 7_2:-4242803 | Msa1045070:CDS |
| GACGCTTACTTCGACTGATG+CGG | 0.649357 | 7_2:-4243343 | Msa1045070:CDS |
| GCTTACTTCGACTGATGCGG+AGG | 0.650647 | 7_2:-4243340 | Msa1045070:CDS |
| GTGGGCGTGTGGATAAATCG+AGG | 0.720927 | 7_2:-4243530 | Msa1045070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTTATGTTAAAAAACA+AGG | - | chr7_2:4242328-4242347 | Msa1045070:intron | 15.0% |
| !! | GAATTTATGTTAAAAAACAA+GGG | - | chr7_2:4242329-4242348 | Msa1045070:intron | 15.0% |
| !! | AATTTATGTTAAAAAACAAG+GGG | - | chr7_2:4242330-4242349 | Msa1045070:intron | 15.0% |
| !! | TCATTATTTAAAAATGTGTT+TGG | - | chr7_2:4243145-4243164 | Msa1045070:CDS | 15.0% |
| !! | TGAATTTATGTTAAAAAACA+AGG | - | chr7_2:4242328-4242347 | Msa1045070:intron | 15.0% |
| !! | GAATTTATGTTAAAAAACAA+GGG | - | chr7_2:4242329-4242348 | Msa1045070:intron | 15.0% |
| !! | AATTTATGTTAAAAAACAAG+GGG | - | chr7_2:4242330-4242349 | Msa1045070:intron | 15.0% |
| !! | TCATTATTTAAAAATGTGTT+TGG | - | chr7_2:4243145-4243164 | Msa1045070:CDS | 15.0% |
| !! | TTCATTATTACCAGAAAAAA+TGG | + | chr7_2:4241985-4242004 | None:intergenic | 20.0% |
| !! | TTATTTAAAAATGTGTTTGG+AGG | - | chr7_2:4243148-4243167 | Msa1045070:intron | 20.0% |
| !!! | TGAAAATTTTGTTGTTAGAA+AGG | + | chr7_2:4243443-4243462 | None:intergenic | 20.0% |
| !! | TTCATTATTACCAGAAAAAA+TGG | + | chr7_2:4241985-4242004 | None:intergenic | 20.0% |
| !! | TTATTTAAAAATGTGTTTGG+AGG | - | chr7_2:4243148-4243167 | Msa1045070:intron | 20.0% |
| !!! | TGAAAATTTTGTTGTTAGAA+AGG | + | chr7_2:4243443-4243462 | None:intergenic | 20.0% |
| !!! | TCTCAAAATTCCATTTTTTC+TGG | - | chr7_2:4241972-4241991 | Msa1045070:intron | 25.0% |
| !!! | AATGAAGTTTTGTGTAACTT+TGG | - | chr7_2:4241999-4242018 | Msa1045070:intron | 25.0% |
| !!! | ATGAAGTTTTGTGTAACTTT+GGG | - | chr7_2:4242000-4242019 | Msa1045070:intron | 25.0% |
| !! | TTTCAGTTAGTTGAGAATTT+TGG | - | chr7_2:4242059-4242078 | Msa1045070:intron | 25.0% |
| ! | TGATGAAATTAAAGAGTTGT+TGG | - | chr7_2:4242271-4242290 | Msa1045070:intron | 25.0% |
| ! | AATTACTATGCATAAGATGA+TGG | - | chr7_2:4242748-4242767 | Msa1045070:CDS | 25.0% |
| !!! | TAACTGTGGCTTTATTTAAT+CGG | - | chr7_2:4243203-4243222 | Msa1045070:CDS | 25.0% |
| !! | TCAGAATAAATGGACTTAAA+TGG | + | chr7_2:4243467-4243486 | None:intergenic | 25.0% |
| ! | GCTAAGAAAAAACATGATAA+AGG | - | chr7_2:4243629-4243648 | Msa1045070:CDS | 25.0% |
| !!! | TCTCAAAATTCCATTTTTTC+TGG | - | chr7_2:4241972-4241991 | Msa1045070:intron | 25.0% |
| !!! | AATGAAGTTTTGTGTAACTT+TGG | - | chr7_2:4241999-4242018 | Msa1045070:intron | 25.0% |
| !!! | ATGAAGTTTTGTGTAACTTT+GGG | - | chr7_2:4242000-4242019 | Msa1045070:intron | 25.0% |
| !! | TTTCAGTTAGTTGAGAATTT+TGG | - | chr7_2:4242059-4242078 | Msa1045070:intron | 25.0% |
| ! | TGATGAAATTAAAGAGTTGT+TGG | - | chr7_2:4242271-4242290 | Msa1045070:intron | 25.0% |
| ! | AATTACTATGCATAAGATGA+TGG | - | chr7_2:4242748-4242767 | Msa1045070:CDS | 25.0% |
| !!! | TAACTGTGGCTTTATTTAAT+CGG | - | chr7_2:4243203-4243222 | Msa1045070:CDS | 25.0% |
| !! | TCAGAATAAATGGACTTAAA+TGG | + | chr7_2:4243467-4243486 | None:intergenic | 25.0% |
| ! | GCTAAGAAAAAACATGATAA+AGG | - | chr7_2:4243629-4243648 | Msa1045070:CDS | 25.0% |
| GTTTCCAAACAAGTATGTAA+AGG | - | chr7_2:4241909-4241928 | Msa1045070:CDS | 30.0% | |
| CAAACCTTTACATACTTGTT+TGG | + | chr7_2:4241916-4241935 | None:intergenic | 30.0% | |
| !! | TATGTAAAGGTTTGTTACGT+CGG | - | chr7_2:4241922-4241941 | Msa1045070:CDS | 30.0% |
| !! | GAATTTTGAGAGAAAACAAG+AGG | + | chr7_2:4241963-4241982 | None:intergenic | 30.0% |
| ! | AGTTAGTTGAGAATTTTGGA+GGG | - | chr7_2:4242063-4242082 | Msa1045070:intron | 30.0% |
| TTGTTCGCAATTTGATACAA+AGG | - | chr7_2:4242091-4242110 | Msa1045070:intron | 30.0% | |
| TGTTCGCAATTTGATACAAA+GGG | - | chr7_2:4242092-4242111 | Msa1045070:intron | 30.0% | |
| ! | TGAGAGGAATTTTCACAATT+CGG | - | chr7_2:4242160-4242179 | Msa1045070:intron | 30.0% |
| TGAAATTAAAGAGTTGTTGG+AGG | - | chr7_2:4242274-4242293 | Msa1045070:intron | 30.0% | |
| TCATTAATTTCGTCATCAAC+CGG | + | chr7_2:4242392-4242411 | None:intergenic | 30.0% | |
| CGAAATTAATGAGTTGTTGA+AGG | - | chr7_2:4242400-4242419 | Msa1045070:intron | 30.0% | |
| AGAAACAATGACTTCATGTA+AGG | + | chr7_2:4242608-4242627 | None:intergenic | 30.0% | |
| ! | TACATGAAGTCATTGTTTCT+TGG | - | chr7_2:4242608-4242627 | Msa1045070:intron | 30.0% |
| AGTAATTACAGCCATCTTAT+CGG | + | chr7_2:4242735-4242754 | None:intergenic | 30.0% | |
| TTAAAAATGTGTTTGGAGGT+AGG | - | chr7_2:4243152-4243171 | Msa1045070:intron | 30.0% | |
| ACTGTTCACTTCAGAATAAA+TGG | + | chr7_2:4243477-4243496 | None:intergenic | 30.0% | |
| GTTTCCAAACAAGTATGTAA+AGG | - | chr7_2:4241909-4241928 | Msa1045070:CDS | 30.0% | |
| CAAACCTTTACATACTTGTT+TGG | + | chr7_2:4241916-4241935 | None:intergenic | 30.0% | |
| !! | TATGTAAAGGTTTGTTACGT+CGG | - | chr7_2:4241922-4241941 | Msa1045070:CDS | 30.0% |
| !! | GAATTTTGAGAGAAAACAAG+AGG | + | chr7_2:4241963-4241982 | None:intergenic | 30.0% |
| ! | AGTTAGTTGAGAATTTTGGA+GGG | - | chr7_2:4242063-4242082 | Msa1045070:intron | 30.0% |
| TTGTTCGCAATTTGATACAA+AGG | - | chr7_2:4242091-4242110 | Msa1045070:intron | 30.0% | |
| TGTTCGCAATTTGATACAAA+GGG | - | chr7_2:4242092-4242111 | Msa1045070:intron | 30.0% | |
| ! | TGAGAGGAATTTTCACAATT+CGG | - | chr7_2:4242160-4242179 | Msa1045070:intron | 30.0% |
| TGAAATTAAAGAGTTGTTGG+AGG | - | chr7_2:4242274-4242293 | Msa1045070:intron | 30.0% | |
| TCATTAATTTCGTCATCAAC+CGG | + | chr7_2:4242392-4242411 | None:intergenic | 30.0% | |
| CGAAATTAATGAGTTGTTGA+AGG | - | chr7_2:4242400-4242419 | Msa1045070:intron | 30.0% | |
| AGAAACAATGACTTCATGTA+AGG | + | chr7_2:4242608-4242627 | None:intergenic | 30.0% | |
| ! | TACATGAAGTCATTGTTTCT+TGG | - | chr7_2:4242608-4242627 | Msa1045070:intron | 30.0% |
| AGTAATTACAGCCATCTTAT+CGG | + | chr7_2:4242735-4242754 | None:intergenic | 30.0% | |
| TTAAAAATGTGTTTGGAGGT+AGG | - | chr7_2:4243152-4243171 | Msa1045070:intron | 30.0% | |
| ACTGTTCACTTCAGAATAAA+TGG | + | chr7_2:4243477-4243496 | None:intergenic | 30.0% | |
| TTTGAGAGAAAACAAGAGGT+GGG | + | chr7_2:4241959-4241978 | None:intergenic | 35.0% | |
| !! | TTTTGAGAGAAAACAAGAGG+TGG | + | chr7_2:4241960-4241979 | None:intergenic | 35.0% |
| !! | AGTTTTGTGTAACTTTGGGA+AGG | - | chr7_2:4242004-4242023 | Msa1045070:intron | 35.0% |
| ! | TGTAACTTTGGGAAGGAAAT+TGG | - | chr7_2:4242011-4242030 | Msa1045070:intron | 35.0% |
| ! | CAGTTAGTTGAGAATTTTGG+AGG | - | chr7_2:4242062-4242081 | Msa1045070:intron | 35.0% |
| TGTTTCTTCTACTGATGTTG+AGG | - | chr7_2:4242136-4242155 | Msa1045070:intron | 35.0% | |
| ! | GAGAGGAATTTTCACAATTC+GGG | - | chr7_2:4242161-4242180 | Msa1045070:intron | 35.0% |
| !! | AATTCGGGTTTTCGATTTGA+TGG | - | chr7_2:4242176-4242195 | Msa1045070:intron | 35.0% |
| ATTAATTTCGTCATCAACCG+GGG | + | chr7_2:4242390-4242409 | None:intergenic | 35.0% | |
| CATTAATTTCGTCATCAACC+GGG | + | chr7_2:4242391-4242410 | None:intergenic | 35.0% | |
| TGAAGATTGAGACTGAACTT+TGG | - | chr7_2:4242513-4242532 | Msa1045070:intron | 35.0% | |
| ! | GGAATACAAAGAGCTTTTGA+TGG | - | chr7_2:4242550-4242569 | Msa1045070:intron | 35.0% |
| GACTTCATGTAAGGCAAATT+GGG | + | chr7_2:4242599-4242618 | None:intergenic | 35.0% | |
| TGACTTCATGTAAGGCAAAT+TGG | + | chr7_2:4242600-4242619 | None:intergenic | 35.0% | |
| ! | TGAAGTCATTGTTTCTTGGT+TGG | - | chr7_2:4242612-4242631 | Msa1045070:intron | 35.0% |
| AGCAAGAGATGTATCGAAAT+GGG | - | chr7_2:4242666-4242685 | Msa1045070:intron | 35.0% | |
| !!! | GAGGTTTTAAAAGAGAAGAC+AGG | - | chr7_2:4243029-4243048 | Msa1045070:CDS | 35.0% |
| ! | GACAGGTTAGTATTTCAAGT+AGG | - | chr7_2:4243046-4243065 | Msa1045070:CDS | 35.0% |
| TAGGTAATTCCTTACATGCT+AGG | - | chr7_2:4243180-4243199 | Msa1045070:intron | 35.0% | |
| ! | CTTTATTTAATCGGAACCGA+GGG | - | chr7_2:4243212-4243231 | Msa1045070:CDS | 35.0% |
| ATCCAAAAATAGGGATGAGA+TGG | - | chr7_2:4243240-4243259 | Msa1045070:CDS | 35.0% | |
| TCCAAAAATAGGGATGAGAT+GGG | - | chr7_2:4243241-4243260 | Msa1045070:CDS | 35.0% | |
| CCTATAGTGTAACAATAAGC+AGG | + | chr7_2:4243580-4243599 | None:intergenic | 35.0% | |
| CCTGCTTATTGTTACACTAT+AGG | - | chr7_2:4243577-4243596 | Msa1045070:CDS | 35.0% | |
| GGTTAGAATACACAAGTTCT+TGG | - | chr7_2:4243598-4243617 | Msa1045070:CDS | 35.0% | |
| TTTGAGAGAAAACAAGAGGT+GGG | + | chr7_2:4241959-4241978 | None:intergenic | 35.0% | |
| !! | TTTTGAGAGAAAACAAGAGG+TGG | + | chr7_2:4241960-4241979 | None:intergenic | 35.0% |
| !! | AGTTTTGTGTAACTTTGGGA+AGG | - | chr7_2:4242004-4242023 | Msa1045070:intron | 35.0% |
| ! | TGTAACTTTGGGAAGGAAAT+TGG | - | chr7_2:4242011-4242030 | Msa1045070:intron | 35.0% |
| ! | CAGTTAGTTGAGAATTTTGG+AGG | - | chr7_2:4242062-4242081 | Msa1045070:intron | 35.0% |
| TGTTTCTTCTACTGATGTTG+AGG | - | chr7_2:4242136-4242155 | Msa1045070:intron | 35.0% | |
| ! | GAGAGGAATTTTCACAATTC+GGG | - | chr7_2:4242161-4242180 | Msa1045070:intron | 35.0% |
| !! | AATTCGGGTTTTCGATTTGA+TGG | - | chr7_2:4242176-4242195 | Msa1045070:intron | 35.0% |
| ATTAATTTCGTCATCAACCG+GGG | + | chr7_2:4242390-4242409 | None:intergenic | 35.0% | |
| CATTAATTTCGTCATCAACC+GGG | + | chr7_2:4242391-4242410 | None:intergenic | 35.0% | |
| TGAAGATTGAGACTGAACTT+TGG | - | chr7_2:4242513-4242532 | Msa1045070:intron | 35.0% | |
| ! | GGAATACAAAGAGCTTTTGA+TGG | - | chr7_2:4242550-4242569 | Msa1045070:intron | 35.0% |
| GACTTCATGTAAGGCAAATT+GGG | + | chr7_2:4242599-4242618 | None:intergenic | 35.0% | |
| TGACTTCATGTAAGGCAAAT+TGG | + | chr7_2:4242600-4242619 | None:intergenic | 35.0% | |
| ! | TGAAGTCATTGTTTCTTGGT+TGG | - | chr7_2:4242612-4242631 | Msa1045070:intron | 35.0% |
| AGCAAGAGATGTATCGAAAT+GGG | - | chr7_2:4242666-4242685 | Msa1045070:intron | 35.0% | |
| !!! | GAGGTTTTAAAAGAGAAGAC+AGG | - | chr7_2:4243029-4243048 | Msa1045070:CDS | 35.0% |
| ! | GACAGGTTAGTATTTCAAGT+AGG | - | chr7_2:4243046-4243065 | Msa1045070:CDS | 35.0% |
| TAGGTAATTCCTTACATGCT+AGG | - | chr7_2:4243180-4243199 | Msa1045070:intron | 35.0% | |
| ! | CTTTATTTAATCGGAACCGA+GGG | - | chr7_2:4243212-4243231 | Msa1045070:CDS | 35.0% |
| ATCCAAAAATAGGGATGAGA+TGG | - | chr7_2:4243240-4243259 | Msa1045070:CDS | 35.0% | |
| TCCAAAAATAGGGATGAGAT+GGG | - | chr7_2:4243241-4243260 | Msa1045070:CDS | 35.0% | |
| CCTATAGTGTAACAATAAGC+AGG | + | chr7_2:4243580-4243599 | None:intergenic | 35.0% | |
| CCTGCTTATTGTTACACTAT+AGG | - | chr7_2:4243577-4243596 | Msa1045070:CDS | 35.0% | |
| GGTTAGAATACACAAGTTCT+TGG | - | chr7_2:4243598-4243617 | Msa1045070:CDS | 35.0% | |
| TTTGGGAAGGAAATTGGAAG+TGG | - | chr7_2:4242017-4242036 | Msa1045070:intron | 40.0% | |
| TTGGGAAGGAAATTGGAAGT+GGG | - | chr7_2:4242018-4242037 | Msa1045070:intron | 40.0% | |
| TAAAGAGTTGTTGGAGGAGA+TGG | - | chr7_2:4242280-4242299 | Msa1045070:intron | 40.0% | |
| AGATGGAGAGAGAAGATAAG+AGG | - | chr7_2:4242297-4242316 | Msa1045070:intron | 40.0% | |
| TTTGGCAGAGGGGAAATATA+AGG | - | chr7_2:4242472-4242491 | Msa1045070:intron | 40.0% | |
| AGGGGAAATATAAGGAGTTG+AGG | - | chr7_2:4242480-4242499 | Msa1045070:intron | 40.0% | |
| GGATATGTGTGAACAGAAGT+TGG | - | chr7_2:4242571-4242590 | Msa1045070:intron | 40.0% | |
| TTCTCAATTGCATCCCTTAG+AGG | + | chr7_2:4242644-4242663 | None:intergenic | 40.0% | |
| GAGCAAGAGATGTATCGAAA+TGG | - | chr7_2:4242665-4242684 | Msa1045070:intron | 40.0% | |
| TGTATCGAAATGGGAAGAAG+AGG | - | chr7_2:4242675-4242694 | Msa1045070:intron | 40.0% | |
| GATGGCAACTGAAGAAAGTA+AGG | + | chr7_2:4242713-4242732 | None:intergenic | 40.0% | |
| ATTACAGCCATCTTATCGGA+TGG | + | chr7_2:4242731-4242750 | None:intergenic | 40.0% | |
| ! | TAAGATGATGGCGTTGTTGA+TGG | - | chr7_2:4242760-4242779 | Msa1045070:CDS | 40.0% |
| TGTTTGGAGGTAGGAATGTT+AGG | - | chr7_2:4243161-4243180 | Msa1045070:intron | 40.0% | |
| !! | GCTTTATTTAATCGGAACCG+AGG | - | chr7_2:4243211-4243230 | Msa1045070:CDS | 40.0% |
| !!! | TATTTTTGGATTCCCACCCT+CGG | + | chr7_2:4243231-4243250 | None:intergenic | 40.0% |
| AGGGTGGGAATCCAAAAATA+GGG | - | chr7_2:4243231-4243250 | Msa1045070:CDS | 40.0% | |
| CCAAAAATAGGGATGAGATG+GGG | - | chr7_2:4243242-4243261 | Msa1045070:CDS | 40.0% | |
| TTGTGCGAATGAACCCAAAA+TGG | - | chr7_2:4243286-4243305 | Msa1045070:CDS | 40.0% | |
| TGTGCGAATGAACCCAAAAT+GGG | - | chr7_2:4243287-4243306 | Msa1045070:CDS | 40.0% | |
| GAATGTGAATGTGGTTTCCA+GGG | + | chr7_2:4243359-4243378 | None:intergenic | 40.0% | |
| CTGGAAACCACATTCACATT+CGG | - | chr7_2:4243358-4243377 | Msa1045070:CDS | 40.0% | |
| CAAGTGAGTATGCAGAATGT+AGG | - | chr7_2:4243388-4243407 | Msa1045070:CDS | 40.0% | |
| ! | CATGAGTGCAACAATGGATT+AGG | + | chr7_2:4243537-4243556 | None:intergenic | 40.0% |
| ACTTAGCATGAGTGCAACAA+TGG | + | chr7_2:4243543-4243562 | None:intergenic | 40.0% | |
| TTTGGGAAGGAAATTGGAAG+TGG | - | chr7_2:4242017-4242036 | Msa1045070:intron | 40.0% | |
| TTGGGAAGGAAATTGGAAGT+GGG | - | chr7_2:4242018-4242037 | Msa1045070:intron | 40.0% | |
| TAAAGAGTTGTTGGAGGAGA+TGG | - | chr7_2:4242280-4242299 | Msa1045070:intron | 40.0% | |
| AGATGGAGAGAGAAGATAAG+AGG | - | chr7_2:4242297-4242316 | Msa1045070:intron | 40.0% | |
| TTTGGCAGAGGGGAAATATA+AGG | - | chr7_2:4242472-4242491 | Msa1045070:intron | 40.0% | |
| AGGGGAAATATAAGGAGTTG+AGG | - | chr7_2:4242480-4242499 | Msa1045070:intron | 40.0% | |
| GGATATGTGTGAACAGAAGT+TGG | - | chr7_2:4242571-4242590 | Msa1045070:intron | 40.0% | |
| TTCTCAATTGCATCCCTTAG+AGG | + | chr7_2:4242644-4242663 | None:intergenic | 40.0% | |
| GAGCAAGAGATGTATCGAAA+TGG | - | chr7_2:4242665-4242684 | Msa1045070:intron | 40.0% | |
| TGTATCGAAATGGGAAGAAG+AGG | - | chr7_2:4242675-4242694 | Msa1045070:intron | 40.0% | |
| GATGGCAACTGAAGAAAGTA+AGG | + | chr7_2:4242713-4242732 | None:intergenic | 40.0% | |
| ATTACAGCCATCTTATCGGA+TGG | + | chr7_2:4242731-4242750 | None:intergenic | 40.0% | |
| ! | TAAGATGATGGCGTTGTTGA+TGG | - | chr7_2:4242760-4242779 | Msa1045070:CDS | 40.0% |
| TGTTTGGAGGTAGGAATGTT+AGG | - | chr7_2:4243161-4243180 | Msa1045070:intron | 40.0% | |
| !! | GCTTTATTTAATCGGAACCG+AGG | - | chr7_2:4243211-4243230 | Msa1045070:CDS | 40.0% |
| !!! | TATTTTTGGATTCCCACCCT+CGG | + | chr7_2:4243231-4243250 | None:intergenic | 40.0% |
| AGGGTGGGAATCCAAAAATA+GGG | - | chr7_2:4243231-4243250 | Msa1045070:CDS | 40.0% | |
| CCAAAAATAGGGATGAGATG+GGG | - | chr7_2:4243242-4243261 | Msa1045070:CDS | 40.0% | |
| TTGTGCGAATGAACCCAAAA+TGG | - | chr7_2:4243286-4243305 | Msa1045070:CDS | 40.0% | |
| TGTGCGAATGAACCCAAAAT+GGG | - | chr7_2:4243287-4243306 | Msa1045070:CDS | 40.0% | |
| GAATGTGAATGTGGTTTCCA+GGG | + | chr7_2:4243359-4243378 | None:intergenic | 40.0% | |
| CTGGAAACCACATTCACATT+CGG | - | chr7_2:4243358-4243377 | Msa1045070:CDS | 40.0% | |
| CAAGTGAGTATGCAGAATGT+AGG | - | chr7_2:4243388-4243407 | Msa1045070:CDS | 40.0% | |
| ! | CATGAGTGCAACAATGGATT+AGG | + | chr7_2:4243537-4243556 | None:intergenic | 40.0% |
| ACTTAGCATGAGTGCAACAA+TGG | + | chr7_2:4243543-4243562 | None:intergenic | 40.0% | |
| ! | GGGTTATTCTAGTGTTGCTG+AGG | - | chr7_2:4242112-4242131 | Msa1045070:intron | 45.0% |
| CTACTGATGTTGAGGATGAG+AGG | - | chr7_2:4242144-4242163 | Msa1045070:intron | 45.0% | |
| ! | TGAAAAAGCTGATTCTGCCC+CGG | - | chr7_2:4242370-4242389 | Msa1045070:intron | 45.0% |
| AGGAGATGAAGAGAGAAGAG+AGG | - | chr7_2:4242420-4242439 | Msa1045070:intron | 45.0% | |
| AAGAGAGGAAGCAGAATGCT+GGG | - | chr7_2:4242435-4242454 | Msa1045070:intron | 45.0% | |
| !! | TTGGTTGGTTTGAGCCTCTA+AGG | - | chr7_2:4242627-4242646 | Msa1045070:intron | 45.0% |
| !! | TGGTTGGTTTGAGCCTCTAA+GGG | - | chr7_2:4242628-4242647 | Msa1045070:intron | 45.0% |
| TCAGTTGCCATCCGATAAGA+TGG | - | chr7_2:4242721-4242740 | Msa1045070:intron | 45.0% | |
| GGAAGTGAGAAAGGATTCGT+TGG | - | chr7_2:4242785-4242804 | Msa1045070:CDS | 45.0% | |
| AGGTGATTCCATTGAGCAAG+AGG | - | chr7_2:4242841-4242860 | Msa1045070:CDS | 45.0% | |
| ! | CTCACTCGTGAGTTTTCTAC+GGG | + | chr7_2:4243000-4243019 | None:intergenic | 45.0% |
| ! | CCTCACTCGTGAGTTTTCTA+CGG | + | chr7_2:4243001-4243020 | None:intergenic | 45.0% |
| CACGAGTGAGGAAGTTTAAG+AGG | - | chr7_2:4243010-4243029 | Msa1045070:CDS | 45.0% | |
| CCACAGTTACCTAGCATGTA+AGG | + | chr7_2:4243192-4243211 | None:intergenic | 45.0% | |
| CCTTACATGCTAGGTAACTG+TGG | - | chr7_2:4243189-4243208 | Msa1045070:intron | 45.0% | |
| TATTTAATCGGAACCGAGGG+TGG | - | chr7_2:4243215-4243234 | Msa1045070:CDS | 45.0% | |
| ATTTAATCGGAACCGAGGGT+GGG | - | chr7_2:4243216-4243235 | Msa1045070:CDS | 45.0% | |
| GAGGGTGGGAATCCAAAAAT+AGG | - | chr7_2:4243230-4243249 | Msa1045070:CDS | 45.0% | |
| ! | CCCCATCTCATCCCTATTTT+TGG | + | chr7_2:4243245-4243264 | None:intergenic | 45.0% |
| GTGCGAATGAACCCAAAATG+GGG | - | chr7_2:4243288-4243307 | Msa1045070:CDS | 45.0% | |
| TGCGAATGAACCCAAAATGG+GGG | - | chr7_2:4243289-4243308 | Msa1045070:CDS | 45.0% | |
| ! | GTTATGCACTCCCCCATTTT+GGG | + | chr7_2:4243302-4243321 | None:intergenic | 45.0% |
| ! | TGTGGAACAGGTTGAATAGC+AGG | + | chr7_2:4243324-4243343 | None:intergenic | 45.0% |
| CGAATGTGAATGTGGTTTCC+AGG | + | chr7_2:4243360-4243379 | None:intergenic | 45.0% | |
| CACATGTCCGAATGTGAATG+TGG | + | chr7_2:4243368-4243387 | None:intergenic | 45.0% | |
| ! | GGGTTATTCTAGTGTTGCTG+AGG | - | chr7_2:4242112-4242131 | Msa1045070:intron | 45.0% |
| CTACTGATGTTGAGGATGAG+AGG | - | chr7_2:4242144-4242163 | Msa1045070:intron | 45.0% | |
| ! | TGAAAAAGCTGATTCTGCCC+CGG | - | chr7_2:4242370-4242389 | Msa1045070:intron | 45.0% |
| AGGAGATGAAGAGAGAAGAG+AGG | - | chr7_2:4242420-4242439 | Msa1045070:intron | 45.0% | |
| AAGAGAGGAAGCAGAATGCT+GGG | - | chr7_2:4242435-4242454 | Msa1045070:intron | 45.0% | |
| !! | TTGGTTGGTTTGAGCCTCTA+AGG | - | chr7_2:4242627-4242646 | Msa1045070:intron | 45.0% |
| !! | TGGTTGGTTTGAGCCTCTAA+GGG | - | chr7_2:4242628-4242647 | Msa1045070:intron | 45.0% |
| TCAGTTGCCATCCGATAAGA+TGG | - | chr7_2:4242721-4242740 | Msa1045070:intron | 45.0% | |
| GGAAGTGAGAAAGGATTCGT+TGG | - | chr7_2:4242785-4242804 | Msa1045070:CDS | 45.0% | |
| AGGTGATTCCATTGAGCAAG+AGG | - | chr7_2:4242841-4242860 | Msa1045070:CDS | 45.0% | |
| ! | CTCACTCGTGAGTTTTCTAC+GGG | + | chr7_2:4243000-4243019 | None:intergenic | 45.0% |
| ! | CCTCACTCGTGAGTTTTCTA+CGG | + | chr7_2:4243001-4243020 | None:intergenic | 45.0% |
| CACGAGTGAGGAAGTTTAAG+AGG | - | chr7_2:4243010-4243029 | Msa1045070:CDS | 45.0% | |
| CCACAGTTACCTAGCATGTA+AGG | + | chr7_2:4243192-4243211 | None:intergenic | 45.0% | |
| CCTTACATGCTAGGTAACTG+TGG | - | chr7_2:4243189-4243208 | Msa1045070:intron | 45.0% | |
| TATTTAATCGGAACCGAGGG+TGG | - | chr7_2:4243215-4243234 | Msa1045070:CDS | 45.0% | |
| ATTTAATCGGAACCGAGGGT+GGG | - | chr7_2:4243216-4243235 | Msa1045070:CDS | 45.0% | |
| GAGGGTGGGAATCCAAAAAT+AGG | - | chr7_2:4243230-4243249 | Msa1045070:CDS | 45.0% | |
| ! | CCCCATCTCATCCCTATTTT+TGG | + | chr7_2:4243245-4243264 | None:intergenic | 45.0% |
| GTGCGAATGAACCCAAAATG+GGG | - | chr7_2:4243288-4243307 | Msa1045070:CDS | 45.0% | |
| TGCGAATGAACCCAAAATGG+GGG | - | chr7_2:4243289-4243308 | Msa1045070:CDS | 45.0% | |
| ! | GTTATGCACTCCCCCATTTT+GGG | + | chr7_2:4243302-4243321 | None:intergenic | 45.0% |
| ! | TGTGGAACAGGTTGAATAGC+AGG | + | chr7_2:4243324-4243343 | None:intergenic | 45.0% |
| CGAATGTGAATGTGGTTTCC+AGG | + | chr7_2:4243360-4243379 | None:intergenic | 45.0% | |
| CACATGTCCGAATGTGAATG+TGG | + | chr7_2:4243368-4243387 | None:intergenic | 45.0% | |
| GACGCTTACTTCGACTGATG+CGG | - | chr7_2:4242223-4242242 | Msa1045070:intron | 50.0% | |
| GAAGAGAGGAAGCAGAATGC+TGG | - | chr7_2:4242434-4242453 | Msa1045070:intron | 50.0% | |
| AGCAGAATGCTGGGTTCAAG+TGG | - | chr7_2:4242444-4242463 | Msa1045070:intron | 50.0% | |
| AATGCTGGGTTCAAGTGGCA+TGG | - | chr7_2:4242449-4242468 | Msa1045070:intron | 50.0% | |
| TGGGTTCAAGTGGCATGGTT+TGG | - | chr7_2:4242454-4242473 | Msa1045070:intron | 50.0% | |
| ! | AAGTGGCATGGTTTGGCAGA+GGG | - | chr7_2:4242461-4242480 | Msa1045070:intron | 50.0% |
| AACTTTGGCAAGAAGCTGCG+AGG | - | chr7_2:4242528-4242547 | Msa1045070:intron | 50.0% | |
| ACTTTGGCAAGAAGCTGCGA+GGG | - | chr7_2:4242529-4242548 | Msa1045070:intron | 50.0% | |
| ! | GATGATGGCGTTGTTGATGG+CGG | - | chr7_2:4242763-4242782 | Msa1045070:CDS | 50.0% |
| !! | ATGATGGCGTTGTTGATGGC+GGG | - | chr7_2:4242764-4242783 | Msa1045070:CDS | 50.0% |
| !! | TTGATGGCGGGAAGTGAGAA+AGG | - | chr7_2:4242776-4242795 | Msa1045070:CDS | 50.0% |
| AAGGATTCGTTGGCACTGCT+AGG | - | chr7_2:4242795-4242814 | Msa1045070:CDS | 50.0% | |
| AGGATTCGTTGGCACTGCTA+GGG | - | chr7_2:4242796-4242815 | Msa1045070:CDS | 50.0% | |
| GGAATCACCTACACTGCACA+CGG | + | chr7_2:4242831-4242850 | None:intergenic | 50.0% | |
| CTGTCTCACCTCTTGCTCAA+TGG | + | chr7_2:4242852-4242871 | None:intergenic | 50.0% | |
| CCGTAGAAAACTCACGAGTG+AGG | - | chr7_2:4242998-4243017 | Msa1045070:CDS | 50.0% | |
| ATAGGGATGAGATGGGGACA+AGG | - | chr7_2:4243248-4243267 | Msa1045070:CDS | 50.0% | |
| ! | AGATGGGGACAAGGCTTTTG+TGG | - | chr7_2:4243257-4243276 | Msa1045070:CDS | 50.0% |
| ! | GATGGGGACAAGGCTTTTGT+GGG | - | chr7_2:4243258-4243277 | Msa1045070:CDS | 50.0% |
| ! | GGTTATGCACTCCCCCATTT+TGG | + | chr7_2:4243303-4243322 | None:intergenic | 50.0% |
| AGCGAGGGAAAATGTGGAAC+AGG | + | chr7_2:4243336-4243355 | None:intergenic | 50.0% | |
| GACGCTTACTTCGACTGATG+CGG | - | chr7_2:4242223-4242242 | Msa1045070:intron | 50.0% | |
| GAAGAGAGGAAGCAGAATGC+TGG | - | chr7_2:4242434-4242453 | Msa1045070:intron | 50.0% | |
| AGCAGAATGCTGGGTTCAAG+TGG | - | chr7_2:4242444-4242463 | Msa1045070:intron | 50.0% | |
| AATGCTGGGTTCAAGTGGCA+TGG | - | chr7_2:4242449-4242468 | Msa1045070:intron | 50.0% | |
| TGGGTTCAAGTGGCATGGTT+TGG | - | chr7_2:4242454-4242473 | Msa1045070:intron | 50.0% | |
| ! | AAGTGGCATGGTTTGGCAGA+GGG | - | chr7_2:4242461-4242480 | Msa1045070:intron | 50.0% |
| AACTTTGGCAAGAAGCTGCG+AGG | - | chr7_2:4242528-4242547 | Msa1045070:intron | 50.0% | |
| ACTTTGGCAAGAAGCTGCGA+GGG | - | chr7_2:4242529-4242548 | Msa1045070:intron | 50.0% | |
| ! | GATGATGGCGTTGTTGATGG+CGG | - | chr7_2:4242763-4242782 | Msa1045070:CDS | 50.0% |
| !! | ATGATGGCGTTGTTGATGGC+GGG | - | chr7_2:4242764-4242783 | Msa1045070:CDS | 50.0% |
| !! | TTGATGGCGGGAAGTGAGAA+AGG | - | chr7_2:4242776-4242795 | Msa1045070:CDS | 50.0% |
| AAGGATTCGTTGGCACTGCT+AGG | - | chr7_2:4242795-4242814 | Msa1045070:CDS | 50.0% | |
| AGGATTCGTTGGCACTGCTA+GGG | - | chr7_2:4242796-4242815 | Msa1045070:CDS | 50.0% | |
| GGAATCACCTACACTGCACA+CGG | + | chr7_2:4242831-4242850 | None:intergenic | 50.0% | |
| CTGTCTCACCTCTTGCTCAA+TGG | + | chr7_2:4242852-4242871 | None:intergenic | 50.0% | |
| CCGTAGAAAACTCACGAGTG+AGG | - | chr7_2:4242998-4243017 | Msa1045070:CDS | 50.0% | |
| ATAGGGATGAGATGGGGACA+AGG | - | chr7_2:4243248-4243267 | Msa1045070:CDS | 50.0% | |
| ! | AGATGGGGACAAGGCTTTTG+TGG | - | chr7_2:4243257-4243276 | Msa1045070:CDS | 50.0% |
| ! | GATGGGGACAAGGCTTTTGT+GGG | - | chr7_2:4243258-4243277 | Msa1045070:CDS | 50.0% |
| ! | GGTTATGCACTCCCCCATTT+TGG | + | chr7_2:4243303-4243322 | None:intergenic | 50.0% |
| AGCGAGGGAAAATGTGGAAC+AGG | + | chr7_2:4243336-4243355 | None:intergenic | 50.0% | |
| GGAAATTGGAAGTGGGCGTG+TGG | - | chr7_2:4242025-4242044 | Msa1045070:intron | 55.0% | |
| GTGGGCGTGTGGATAAATCG+AGG | - | chr7_2:4242036-4242055 | Msa1045070:intron | 55.0% | |
| GCTTACTTCGACTGATGCGG+AGG | - | chr7_2:4242226-4242245 | Msa1045070:intron | 55.0% | |
| ! | CAAGTGGCATGGTTTGGCAG+AGG | - | chr7_2:4242460-4242479 | Msa1045070:intron | 55.0% |
| ! | AGTGGCATGGTTTGGCAGAG+GGG | - | chr7_2:4242462-4242481 | Msa1045070:intron | 55.0% |
| TGGCACTGCTAGGGTTGTAC+AGG | - | chr7_2:4242805-4242824 | Msa1045070:CDS | 55.0% | |
| ATGTGGTTTCCAGGGAGCGA+GGG | + | chr7_2:4243351-4243370 | None:intergenic | 55.0% | |
| AATGTGGTTTCCAGGGAGCG+AGG | + | chr7_2:4243352-4243371 | None:intergenic | 55.0% | |
| GGAAATTGGAAGTGGGCGTG+TGG | - | chr7_2:4242025-4242044 | Msa1045070:intron | 55.0% | |
| GTGGGCGTGTGGATAAATCG+AGG | - | chr7_2:4242036-4242055 | Msa1045070:intron | 55.0% | |
| GCTTACTTCGACTGATGCGG+AGG | - | chr7_2:4242226-4242245 | Msa1045070:intron | 55.0% | |
| ! | CAAGTGGCATGGTTTGGCAG+AGG | - | chr7_2:4242460-4242479 | Msa1045070:intron | 55.0% |
| ! | AGTGGCATGGTTTGGCAGAG+GGG | - | chr7_2:4242462-4242481 | Msa1045070:intron | 55.0% |
| TGGCACTGCTAGGGTTGTAC+AGG | - | chr7_2:4242805-4242824 | Msa1045070:CDS | 55.0% | |
| ATGTGGTTTCCAGGGAGCGA+GGG | + | chr7_2:4243351-4243370 | None:intergenic | 55.0% | |
| AATGTGGTTTCCAGGGAGCG+AGG | + | chr7_2:4243352-4243371 | None:intergenic | 55.0% | |
| GTACAGGCCGTGTGCAGTGT+AGG | - | chr7_2:4242821-4242840 | Msa1045070:CDS | 60.0% | |
| CCAGGGAGCGAGGGAAAATG+TGG | + | chr7_2:4243342-4243361 | None:intergenic | 60.0% | |
| ! | CCACATTTTCCCTCGCTCCC+TGG | - | chr7_2:4243339-4243358 | Msa1045070:CDS | 60.0% |
| GTACAGGCCGTGTGCAGTGT+AGG | - | chr7_2:4242821-4242840 | Msa1045070:CDS | 60.0% | |
| CCAGGGAGCGAGGGAAAATG+TGG | + | chr7_2:4243342-4243361 | None:intergenic | 60.0% | |
| ! | CCACATTTTCCCTCGCTCCC+TGG | - | chr7_2:4243339-4243358 | Msa1045070:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 4241897 | 4243691 | 4241897 | ID=Msa1045070;Name=Msa1045070 |
| chr7_2 | mRNA | 4241897 | 4243691 | 4241897 | ID=Msa1045070-mRNA-1;Parent=Msa1045070;Name=Msa1045070-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.25|0.2|1|0|0|5|0|327 |
| chr7_2 | exon | 4241897 | 4241989 | 4241897 | ID=Msa1045070-mRNA-1:exon:1003;Parent=Msa1045070-mRNA-1 |
| chr7_2 | exon | 4242726 | 4242939 | 4242726 | ID=Msa1045070-mRNA-1:exon:1002;Parent=Msa1045070-mRNA-1 |
| chr7_2 | exon | 4242967 | 4243166 | 4242967 | ID=Msa1045070-mRNA-1:exon:1001;Parent=Msa1045070-mRNA-1 |
| chr7_2 | exon | 4243197 | 4243430 | 4243197 | ID=Msa1045070-mRNA-1:exon:1000;Parent=Msa1045070-mRNA-1 |
| chr7_2 | exon | 4243452 | 4243691 | 4243452 | ID=Msa1045070-mRNA-1:exon:999;Parent=Msa1045070-mRNA-1 |
| chr7_2 | CDS | 4243452 | 4243691 | 4243452 | ID=Msa1045070-mRNA-1:cds;Parent=Msa1045070-mRNA-1 |
| chr7_2 | CDS | 4243197 | 4243430 | 4243197 | ID=Msa1045070-mRNA-1:cds;Parent=Msa1045070-mRNA-1 |
| chr7_2 | CDS | 4242967 | 4243166 | 4242967 | ID=Msa1045070-mRNA-1:cds;Parent=Msa1045070-mRNA-1 |
| chr7_2 | CDS | 4242726 | 4242939 | 4242726 | ID=Msa1045070-mRNA-1:cds;Parent=Msa1045070-mRNA-1 |
| chr7_2 | CDS | 4241897 | 4241989 | 4241897 | ID=Msa1045070-mRNA-1:cds;Parent=Msa1045070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
