AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 77 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTAATTCTATATGTAATT+TGG 0.113702 7_2:-6413172 Msa1046080:three_prime_UTR
TCCATCCATGTTGCATTAAT+TGG 0.147680 7_2:+6413292 None:intergenic
TGAGGAACTCAAACAATTTA+AGG 0.163299 7_2:-6414132 Msa1046080:CDS
GTCCACAATCACATTTAAAT+TGG 0.209735 7_2:+6413579 None:intergenic
ATTATATATATCAATGTATT+TGG 0.214681 7_2:-6413078 Msa1046080:three_prime_UTR
TTGCGGGTCCATGGAGAATT+TGG 0.235128 7_2:-6417818 Msa1046080:five_prime_UTR
GTCAGGGTCGGCGCGTTTCA+TGG 0.308268 7_2:-6417708 Msa1046080:five_prime_UTR
TCCTTGTTTGTGTTTGTTGC+CGG 0.322987 7_2:+6417309 None:intergenic
TCACATTTAAATTGGCCATT+TGG 0.332786 7_2:+6413587 None:intergenic
CTCCAACAATGTCAAATTGC+AGG 0.336874 7_2:-6414227 Msa1046080:five_prime_UTR
AGAGTACCTTTGATTGTGTC+AGG 0.339380 7_2:-6417725 Msa1046080:five_prime_UTR
GACCAAGCATTTGACATTGT+TGG 0.343423 7_2:+6414188 None:intergenic
GACAAGCAGTAAAAGTTTAT+CGG 0.363077 7_2:+6417748 None:intergenic
CAATGTCAAATTGCAGGCTT+GGG 0.366731 7_2:-6414221 Msa1046080:five_prime_UTR
CATAGTGACAATTACAGAAT+TGG 0.378131 7_2:+6413240 None:intergenic
CAATCTGTTTCAGCTTGAAT+AGG 0.382751 7_2:+6417374 None:intergenic
GAGGGAAAACCCTTGCAAAT+TGG 0.399141 7_2:+6417902 None:intergenic
ACAATGTCAAATGCTTGGTC+TGG 0.403543 7_2:-6414185 Msa1046080:CDS
AGCCTGCAATTTGACATTGT+TGG 0.403841 7_2:+6414225 None:intergenic
ACAATGTCAAATTGCAGGCT+TGG 0.414903 7_2:-6414222 Msa1046080:five_prime_UTR
AAATCCATAGCGTCTCTTGC+GGG 0.439000 7_2:-6417834 Msa1046080:five_prime_UTR
TTGCAAAACTTCTTCATGAC+CGG 0.453391 7_2:-6417328 Msa1046080:five_prime_UTR
TTGCAAATTGGTCGATCTAC+AGG 0.455816 7_2:+6417914 None:intergenic
TCCATGGAGAATTTGGTGTC+AGG 0.459130 7_2:-6417811 Msa1046080:five_prime_UTR
AGGTACAAATTTCCAATTGT+AGG 0.463626 7_2:-6413437 Msa1046080:CDS
AAATTGTTTGAGTTCCTCAA+TGG 0.471669 7_2:+6414136 None:intergenic
CTCCAACAATGTCAAATGCT+TGG 0.473618 7_2:-6414190 Msa1046080:exon
ACAAGCAGTAAAAGTTTATC+GGG 0.477726 7_2:+6417749 None:intergenic
CTATTCAAGCTGAAACAGAT+TGG 0.478401 7_2:-6417373 Msa1046080:five_prime_UTR
TAGTGGTTAATGAAATCTGA+TGG 0.484600 7_2:-6413355 Msa1046080:three_prime_UTR
CAATGTCAAATGCTTGGTCT+GGG 0.486270 7_2:-6414184 Msa1046080:CDS
TAGCGTCTCTTGCGGGTCCA+TGG 0.489160 7_2:-6417827 Msa1046080:five_prime_UTR
CAAGGTCCACCATGACTGTA+AGG 0.490493 7_2:+6417782 None:intergenic
ATGATTTGATAAAATTAACT+TGG 0.492727 7_2:+6413323 None:intergenic
AACTGAACGTTCGTGGGTAG+AGG 0.492865 7_2:+6417883 None:intergenic
CAAATCCATAGCGTCTCTTG+CGG 0.495008 7_2:-6417835 Msa1046080:five_prime_UTR
ATGAGAAAGAACATAAATAG+TGG 0.495321 7_2:-6413372 Msa1046080:three_prime_UTR
GTTTCAGCTTGAATAGGAGA+TGG 0.499512 7_2:+6417380 None:intergenic
TATTCAAGCTGAAACAGATT+GGG 0.504544 7_2:-6417372 Msa1046080:five_prime_UTR
ATCAATAAATCTTACAAGGA+AGG 0.508505 7_2:-6417958 Msa1046080:five_prime_UTR
ATTTGAAAACTGAACGTTCG+TGG 0.514927 7_2:+6417876 None:intergenic
AATTTGACATTGTTGGAGAA+TGG 0.515371 7_2:+6414232 None:intergenic
AGGAAGGCTAAAACTCCAAA+TGG 0.517189 7_2:-6413602 Msa1046080:CDS
ACCTTTGATTGTGTCAGGGT+CGG 0.518796 7_2:-6417720 Msa1046080:five_prime_UTR
TCCAATTAATGCAACATGGA+TGG 0.520892 7_2:-6413293 Msa1046080:three_prime_UTR
CATTTGACATTGTTGGAGCA+TGG 0.525905 7_2:+6414195 None:intergenic
TAATGCAACATGGATGGACT+TGG 0.527685 7_2:-6413287 Msa1046080:three_prime_UTR
TATTAATGATGATTCCATTG+AGG 0.530317 7_2:-6414150 Msa1046080:CDS
GGCCAATTTAAATGTGATTG+TGG 0.541689 7_2:-6413581 Msa1046080:CDS
TTTCAGCTTGAATAGGAGAT+GGG 0.542088 7_2:+6417381 None:intergenic
CTCTGAAAATTGTAGGCTTG+GGG 0.549249 7_2:-6414257 Msa1046080:intron
TGGACCCGCAAGAGACGCTA+TGG 0.556214 7_2:+6417830 None:intergenic
CCCTGACACCAAATTCTCCA+TGG 0.556606 7_2:+6417810 None:intergenic
CCATGGAGAATTTGGTGTCA+GGG 0.559924 7_2:-6417810 Msa1046080:five_prime_UTR
AAGGCTTTACTATTCTTCGA+AGG 0.573698 7_2:-6417939 Msa1046080:five_prime_UTR
AACTCAAACAATTTAAGGAA+AGG 0.573878 7_2:-6414127 Msa1046080:intron
GAGTATCAATAAATCTTACA+AGG 0.582088 7_2:-6417962 Msa1046080:five_prime_UTR
AGGGTAGATCCTTACAGTCA+TGG 0.589537 7_2:-6417791 Msa1046080:five_prime_UTR
CACTTCTGTCAATGAGATTG+TGG 0.596935 7_2:-6413263 Msa1046080:three_prime_UTR
TTTGAAAACTGAACGTTCGT+GGG 0.600541 7_2:+6417877 None:intergenic
GCAGTAAAAGTTTATCGGGA+AGG 0.604212 7_2:+6417753 None:intergenic
AGTGGTTAATGAAATCTGAT+GGG 0.604425 7_2:-6413354 Msa1046080:three_prime_UTR
TTATCGGGAAGGAGCGAGCA+AGG 0.605530 7_2:+6417764 None:intergenic
ACTGAACGTTCGTGGGTAGA+GGG 0.607686 7_2:+6417884 None:intergenic
GTAGATCGACCAATTTGCAA+GGG 0.609149 7_2:-6417911 Msa1046080:five_prime_UTR
TGTAGATCGACCAATTTGCA+AGG 0.610342 7_2:-6417912 Msa1046080:five_prime_UTR
CAAGCTGAAACAGATTGGGT+AGG 0.611478 7_2:-6417368 Msa1046080:five_prime_UTR
GAGTACCTTTGATTGTGTCA+GGG 0.614624 7_2:-6417724 Msa1046080:five_prime_UTR
ACCGGCAACAAACACAAACA+AGG 0.627964 7_2:-6417310 Msa1046080:five_prime_UTR
ACTCTCCAATTAATGCAACA+TGG 0.635926 7_2:-6413297 Msa1046080:three_prime_UTR
AATGTCAAATTGCAGGCTTG+GGG 0.640848 7_2:-6414220 Msa1046080:five_prime_UTR
ACAGCTGCACTAAATGCACC+AGG 0.652832 7_2:-6413622 Msa1046080:intron
CTGCACTAAATGCACCAGGA+AGG 0.665837 7_2:-6413618 Msa1046080:CDS
GCCGACCCTGACACAATCAA+AGG 0.668703 7_2:+6417719 None:intergenic
GTAGATCCTTACAGTCATGG+TGG 0.717900 7_2:-6417788 Msa1046080:five_prime_UTR
AGGGTCGGCGCGTTTCATGG+CGG 0.720488 7_2:-6417705 Msa1046080:five_prime_UTR
GGCAACAAACACAAACAAGG+AGG 0.739402 7_2:-6417307 Msa1046080:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCATGAATAAAAAAAAA+AGG + chr7_2:6414089-6414108 None:intergenic 10.0%
!! AAAATAATAGTAGTAATATA+TGG + chr7_2:6415852-6415871 None:intergenic 10.0%
!!! AAAATTGATTTATGTTTAAT+TGG + chr7_2:6416922-6416941 None:intergenic 10.0%
!! ATTATATATATCAATGTATT+TGG - chr7_2:6417942-6417961 Msa1046080:five_prime_UTR 10.0%
!! ATGAATAAAAAAAAAAGGAA+GGG + chr7_2:6414084-6414103 None:intergenic 15.0%
!!! TTTTTATATATACATGTCAT+CGG - chr7_2:6414474-6414493 Msa1046080:intron 15.0%
!! ATATATGTAAAATTGTTCTA+CGG - chr7_2:6414941-6414960 Msa1046080:intron 15.0%
!!! CTTTATACAATATGAATTTT+TGG - chr7_2:6415177-6415196 Msa1046080:intron 15.0%
!!! TACAAACTTTTTATTAAAGT+AGG + chr7_2:6415282-6415301 None:intergenic 15.0%
!! TCTTGAAATAATAGAAAATT+TGG + chr7_2:6415389-6415408 None:intergenic 15.0%
!! AGAAAAATAGTAGTAATATA+TGG + chr7_2:6415933-6415952 None:intergenic 15.0%
!! AATAAAAACTTTCATCTATT+AGG + chr7_2:6416602-6416621 None:intergenic 15.0%
!!! TAATAGATGAAAGTTTTTAT+TGG - chr7_2:6416601-6416620 Msa1046080:five_prime_UTR 15.0%
!!! CTTTTTATTTATAGCTTTTT+GGG - chr7_2:6417096-6417115 Msa1046080:intron 15.0%
!! CTAAATTAATAATAGAGAAT+TGG + chr7_2:6417157-6417176 None:intergenic 15.0%
!! CTGTTATTATTATTATTACA+AGG - chr7_2:6417296-6417315 Msa1046080:intron 15.0%
!! ATGATTTGATAAAATTAACT+TGG + chr7_2:6417700-6417719 None:intergenic 15.0%
!! TACTAATTCTATATGTAATT+TGG - chr7_2:6417848-6417867 Msa1046080:five_prime_UTR 15.0%
!!! TTTTTTATTGATAAACTCAT+TGG - chr7_2:6417898-6417917 Msa1046080:five_prime_UTR 15.0%
!! ACTGACAAATTAAATAAACA+GGG + chr7_2:6413407-6413426 None:intergenic 20.0%
!! TACTGACAAATTAAATAAAC+AGG + chr7_2:6413408-6413427 None:intergenic 20.0%
!!! TTGTTTTTATCTACTTTTGT+AGG - chr7_2:6413595-6413614 Msa1046080:CDS 20.0%
!!! ATTCTGAAATTGAGAATTAA+GGG + chr7_2:6413762-6413781 None:intergenic 20.0%
!!! TATTCTGAAATTGAGAATTA+AGG + chr7_2:6413763-6413782 None:intergenic 20.0%
!!! ATATGATTTTGTTCTTTCAA+AGG - chr7_2:6413780-6413799 Msa1046080:intron 20.0%
!! CATGAATAAAAAAAAAAGGA+AGG + chr7_2:6414085-6414104 None:intergenic 20.0%
!! TCTGATTAAAACAATAAAGA+AGG + chr7_2:6414361-6414380 None:intergenic 20.0%
!!! TATTTCTAAGTTTTCTCAAA+AGG - chr7_2:6414389-6414408 Msa1046080:intron 20.0%
!! TACAAATATTTGCTTTACTT+TGG + chr7_2:6414442-6414461 None:intergenic 20.0%
!! TAAAGCAAATATTTGTAGTA+TGG - chr7_2:6414445-6414464 Msa1046080:intron 20.0%
!! AACGATGTAAATCAAAATAA+AGG + chr7_2:6414534-6414553 None:intergenic 20.0%
!!! TATTTTGATTTACATCGTTA+TGG - chr7_2:6414535-6414554 Msa1046080:intron 20.0%
!! CATATTATAAAAAAACATGC+AGG + chr7_2:6414664-6414683 None:intergenic 20.0%
!! CAAATAAAACATATTTCCTA+TGG - chr7_2:6415050-6415069 Msa1046080:intron 20.0%
!!! AAAAGTGTATAATAGTAAGT+AGG + chr7_2:6415320-6415339 None:intergenic 20.0%
!! GAATTTCAAATTCGAATTTA+TGG - chr7_2:6415592-6415611 Msa1046080:intron 20.0%
!!! TGAATTTTGAGTAATGTTTA+AGG + chr7_2:6415813-6415832 None:intergenic 20.0%
!! AAAGAGTAAGTGTTTATAAA+AGG - chr7_2:6415979-6415998 Msa1046080:intron 20.0%
!! AAAAGGAAAACATTTAGTAT+TGG - chr7_2:6415996-6416015 Msa1046080:intron 20.0%
!! AAAGGAAAACATTTAGTATT+GGG - chr7_2:6415997-6416016 Msa1046080:intron 20.0%
!! AAAGTTGTAGAAATTTATCT+GGG + chr7_2:6416038-6416057 None:intergenic 20.0%
!! TAAAGTTGTAGAAATTTATC+TGG + chr7_2:6416039-6416058 None:intergenic 20.0%
!! AGAAATAAAAGATGAAATCA+AGG + chr7_2:6416326-6416345 None:intergenic 20.0%
!!! TTGATTTCATCTTTTATTTC+TGG - chr7_2:6416325-6416344 Msa1046080:intron 20.0%
!!! ACAATTTTCAGAGTTTTTAA+TGG + chr7_2:6416756-6416775 None:intergenic 20.0%
!!! TTAAAAACTCTGAAAATTGT+AGG - chr7_2:6416756-6416775 Msa1046080:intron 20.0%
!! CCAAAAAGCTATAAATAAAA+AGG + chr7_2:6417098-6417117 None:intergenic 20.0%
!!! CCTTTTTATTTATAGCTTTT+TGG - chr7_2:6417095-6417114 Msa1046080:intron 20.0%
!!! CTTTTTACTTGTTCAATTTA+TGG + chr7_2:6417243-6417262 None:intergenic 20.0%
!!! CATGTATATTTTTTTACCTT+GGG + chr7_2:6417486-6417505 None:intergenic 20.0%
!!! ACATGTATATTTTTTTACCT+TGG + chr7_2:6417487-6417506 None:intergenic 20.0%
! GAGTATCAATAAATCTTACA+AGG - chr7_2:6413058-6413077 Msa1046080:three_prime_UTR 25.0%
! ATCAATAAATCTTACAAGGA+AGG - chr7_2:6413062-6413081 Msa1046080:three_prime_UTR 25.0%
! AAGGAACTCAATTATTCATA+TGG + chr7_2:6413383-6413402 None:intergenic 25.0%
! CTGACAAATTAAATAAACAG+GGG + chr7_2:6413406-6413425 None:intergenic 25.0%
!! GAAGTTTTGCAAATTCTTTT+TGG + chr7_2:6413684-6413703 None:intergenic 25.0%
! ACACAAAACATGAGAAAAAA+TGG + chr7_2:6413815-6413834 None:intergenic 25.0%
! TCAGATTTATTTGAAAAGAG+AGG - chr7_2:6414220-6414239 Msa1046080:five_prime_UTR 25.0%
! CAGATTTATTTGAAAAGAGA+GGG - chr7_2:6414221-6414240 Msa1046080:five_prime_UTR 25.0%
! CTGAACATACTCATAATAAA+AGG + chr7_2:6414760-6414779 None:intergenic 25.0%
!! TGCTATTAGTATTTCTATCT+TGG - chr7_2:6414781-6414800 Msa1046080:intron 25.0%
! GTGATTTCATTTATGAATGA+TGG - chr7_2:6414803-6414822 Msa1046080:intron 25.0%
! ACAAAACTGACATAATAGTT+TGG - chr7_2:6414892-6414911 Msa1046080:intron 25.0%
! CCATAAGAATTTAACCTAAA+CGG + chr7_2:6415130-6415149 None:intergenic 25.0%
!! CATATTTGTGAATTTTGAAC+TGG + chr7_2:6415452-6415471 None:intergenic 25.0%
! TGCAATAAAAAACAACAACA+TGG + chr7_2:6415528-6415547 None:intergenic 25.0%
!! TATCAGAAGAAAGTTTTCAT+TGG - chr7_2:6415623-6415642 Msa1046080:intron 25.0%
!!! TTATTTTATTGCTCAAGTAG+AGG - chr7_2:6415865-6415884 Msa1046080:intron 25.0%
! CTGTTAATGTCTTTCAATAA+TGG + chr7_2:6415907-6415926 None:intergenic 25.0%
!! AAAGATGAAATCAAGGATTT+TGG + chr7_2:6416319-6416338 None:intergenic 25.0%
!!! TTCATCTTTTATTTCTGGAT+CGG - chr7_2:6416330-6416349 Msa1046080:intron 25.0%
! ATAGTTTATACTAAACCTGA+GGG + chr7_2:6416708-6416727 None:intergenic 25.0%
! AATAGTTTATACTAAACCTG+AGG + chr7_2:6416709-6416728 None:intergenic 25.0%
!! GAGTTTTTAATGGTTGTAAA+TGG + chr7_2:6416746-6416765 None:intergenic 25.0%
! TATTAATGATGATTCCATTG+AGG - chr7_2:6416870-6416889 Msa1046080:intron 25.0%
! AACTCAAACAATTTAAGGAA+AGG - chr7_2:6416893-6416912 Msa1046080:intron 25.0%
! AGACTTAGAATTGTGTTAAT+TGG - chr7_2:6417204-6417223 Msa1046080:intron 25.0%
! TTGATAAAAAGACCTACAAT+TGG + chr7_2:6417598-6417617 None:intergenic 25.0%
! ATGAGAAAGAACATAAATAG+TGG - chr7_2:6417648-6417667 Msa1046080:intron 25.0%
!! GTAATTGTCACTATGTTTTA+AGG - chr7_2:6417788-6417807 Msa1046080:five_prime_UTR 25.0%
!!! TATGTTTTAAGGACTAACTT+GGG - chr7_2:6417799-6417818 Msa1046080:five_prime_UTR 25.0%
ACAAGCAGTAAAAGTTTATC+GGG + chr7_2:6413274-6413293 None:intergenic 30.0%
GACAAGCAGTAAAAGTTTAT+CGG + chr7_2:6413275-6413294 None:intergenic 30.0%
CAAATTAAATAAACAGGGGA+AGG + chr7_2:6413402-6413421 None:intergenic 30.0%
ACAGAAAACTAAAATGCAGA+GGG + chr7_2:6413497-6413516 None:intergenic 30.0%
AACAGAAAACTAAAATGCAG+AGG + chr7_2:6413498-6413517 None:intergenic 30.0%
! TAGTTTTCTGTTTGTGAACT+TGG - chr7_2:6413506-6413525 Msa1046080:intron 30.0%
TATTCAAGCTGAAACAGATT+GGG - chr7_2:6413648-6413667 Msa1046080:intron 30.0%
CTTGCATGTTAGTTGAAATT+AGG + chr7_2:6414256-6414275 None:intergenic 30.0%
! AAGGAGTTGAAATCTTTTCA+TGG - chr7_2:6414408-6414427 Msa1046080:intron 30.0%
! AGGAGTTGAAATCTTTTCAT+GGG - chr7_2:6414409-6414428 Msa1046080:intron 30.0%
! TGACATAATAGTTTGGAACT+TGG - chr7_2:6414899-6414918 Msa1046080:intron 30.0%
! GACATAATAGTTTGGAACTT+GGG - chr7_2:6414900-6414919 Msa1046080:intron 30.0%
ATGTAAAATTGTTCTACGGA+AGG - chr7_2:6414945-6414964 Msa1046080:intron 30.0%
TGTAAAATTGTTCTACGGAA+GGG - chr7_2:6414946-6414965 Msa1046080:intron 30.0%
TTAGAAGCAGGTTAATTTAG+TGG + chr7_2:6415015-6415034 None:intergenic 30.0%
GGCAATCTAGTACTATAAAA+CGG + chr7_2:6415109-6415128 None:intergenic 30.0%
! CCGTTTAGGTTAAATTCTTA+TGG - chr7_2:6415127-6415146 Msa1046080:intron 30.0%
TTATGGAACGACAATAGATA+TGG - chr7_2:6415144-6415163 Msa1046080:intron 30.0%
ACAGGGTATGAAATATAACA+AGG - chr7_2:6415230-6415249 Msa1046080:intron 30.0%
! TTTCAAGAATCCTTTTATGC+TGG - chr7_2:6415401-6415420 Msa1046080:intron 30.0%
TGAAAACTTTCTTCTGATAC+AGG + chr7_2:6415622-6415641 None:intergenic 30.0%
TATAAGCATAGTTGTCAAAG+CGG - chr7_2:6415650-6415669 Msa1046080:intron 30.0%
TTGACAACTATGCTTATAAG+AGG - chr7_2:6416500-6416519 Msa1046080:intron 30.0%
TGACAACTATGCTTATAAGA+GGG - chr7_2:6416501-6416520 Msa1046080:intron 30.0%
! GGTGAATTTAGGACTAAATA+GGG - chr7_2:6416636-6416655 Msa1046080:five_prime_UTR 30.0%
! GTGAATTTAGGACTAAATAG+GGG - chr7_2:6416637-6416656 Msa1046080:five_prime_UTR 30.0%
AATTTGACATTGTTGGAGAA+TGG + chr7_2:6416791-6416810 None:intergenic 30.0%
! AAATTGTTTGAGTTCCTCAA+TGG + chr7_2:6416887-6416906 None:intergenic 30.0%
TGAGGAACTCAAACAATTTA+AGG - chr7_2:6416888-6416907 Msa1046080:intron 30.0%
! ACAAGCATCACAATTTTCAA+AGG - chr7_2:6417003-6417022 Msa1046080:intron 30.0%
CAAACAATAGCTTCAATAAC+AGG + chr7_2:6417032-6417051 None:intergenic 30.0%
TTGAAGCTATTGTTTGTGAA+AGG - chr7_2:6417036-6417055 Msa1046080:intron 30.0%
TCACATTTAAATTGGCCATT+TGG + chr7_2:6417436-6417455 None:intergenic 30.0%
GTCCACAATCACATTTAAAT+TGG + chr7_2:6417444-6417463 None:intergenic 30.0%
TATACATGTCTTTGTGCTTA+TGG - chr7_2:6417498-6417517 Msa1046080:intron 30.0%
! ACTTGATTCGATAATTGACA+TGG - chr7_2:6417543-6417562 Msa1046080:intron 30.0%
AGGTACAAATTTCCAATTGT+AGG - chr7_2:6417583-6417602 Msa1046080:intron 30.0%
! TGTAGGTCTTTTTATCAAGT+AGG - chr7_2:6417600-6417619 Msa1046080:intron 30.0%
TAGTGGTTAATGAAATCTGA+TGG - chr7_2:6417665-6417684 Msa1046080:intron 30.0%
AGTGGTTAATGAAATCTGAT+GGG - chr7_2:6417666-6417685 Msa1046080:intron 30.0%
CATAGTGACAATTACAGAAT+TGG + chr7_2:6417783-6417802 None:intergenic 30.0%
!!! CTATGTTTTAAGGACTAACT+TGG - chr7_2:6417798-6417817 Msa1046080:five_prime_UTR 30.0%
AAGGCTTTACTATTCTTCGA+AGG - chr7_2:6413081-6413100 Msa1046080:three_prime_UTR 35.0%
TTTGAAAACTGAACGTTCGT+GGG + chr7_2:6413146-6413165 None:intergenic 35.0%
ATTTGAAAACTGAACGTTCG+TGG + chr7_2:6413147-6413166 None:intergenic 35.0%
! ACGTTCAGTTTTCAAATTGC+TGG - chr7_2:6413150-6413169 Msa1046080:three_prime_UTR 35.0%
! CTGCATTATTTCTTGCTTGT+GGG - chr7_2:6413353-6413372 Msa1046080:three_prime_UTR 35.0%
! TGCATTATTTCTTGCTTGTG+GGG - chr7_2:6413354-6413373 Msa1046080:three_prime_UTR 35.0%
AATCGCTTGATTCTTTGTTC+TGG - chr7_2:6413535-6413554 Msa1046080:intron 35.0%
ATCGCTTGATTCTTTGTTCT+GGG - chr7_2:6413536-6413555 Msa1046080:intron 35.0%
! TTGATTCTTTGTTCTGGGTA+TGG - chr7_2:6413541-6413560 Msa1046080:intron 35.0%
TTTCAGCTTGAATAGGAGAT+GGG + chr7_2:6413642-6413661 None:intergenic 35.0%
CAATCTGTTTCAGCTTGAAT+AGG + chr7_2:6413649-6413668 None:intergenic 35.0%
CTATTCAAGCTGAAACAGAT+TGG - chr7_2:6413647-6413666 Msa1046080:intron 35.0%
TTGCAAAACTTCTTCATGAC+CGG - chr7_2:6413692-6413711 Msa1046080:intron 35.0%
ATTTACCAATCTATGTGTGC+AGG + chr7_2:6414169-6414188 None:intergenic 35.0%
AAGCAATAAGCAGATATGTG+TGG + chr7_2:6414331-6414350 None:intergenic 35.0%
TTTACATCGTTATGGACCTA+TGG - chr7_2:6414543-6414562 Msa1046080:intron 35.0%
AAATGTTCAAGGAGTTCACA+TGG - chr7_2:6414706-6414725 Msa1046080:intron 35.0%
ATGGTTGAAGTTGCTATCAT+TGG - chr7_2:6414983-6415002 Msa1046080:intron 35.0%
ATTAACCTGCTTCTAATGCT+TGG - chr7_2:6415019-6415038 Msa1046080:intron 35.0%
! ATAGTACTAGATTGCCGTTT+AGG - chr7_2:6415113-6415132 Msa1046080:intron 35.0%
TTTGGATTGCCTTTGTCATT+AGG - chr7_2:6415195-6415214 Msa1046080:intron 35.0%
AACCTAAGTCCTAATGACAA+AGG + chr7_2:6415207-6415226 None:intergenic 35.0%
! ATTAGGACTTAGGTTGTTAC+AGG - chr7_2:6415212-6415231 Msa1046080:intron 35.0%
! TTAGGACTTAGGTTGTTACA+GGG - chr7_2:6415213-6415232 Msa1046080:intron 35.0%
! GAATTTTGAACTGGCAGAAA+GGG + chr7_2:6415443-6415462 None:intergenic 35.0%
! TGAATTTTGAACTGGCAGAA+AGG + chr7_2:6415444-6415463 None:intergenic 35.0%
GCATCATTTGAAGGATTTGA+AGG + chr7_2:6415506-6415525 None:intergenic 35.0%
AACAACATGGCATCATTTGA+AGG + chr7_2:6415515-6415534 None:intergenic 35.0%
TAGTTGTCAAAGCGGAAATT+CGG - chr7_2:6415658-6415677 Msa1046080:intron 35.0%
TAGAAAGAGAAAGAGAGAAG+CGG + chr7_2:6416106-6416125 None:intergenic 35.0%
AAGAAGAAGAAGACAGATCA+AGG + chr7_2:6416181-6416200 None:intergenic 35.0%
!! TTTTTATTGGTGCTTACGAG+AGG - chr7_2:6416614-6416633 Msa1046080:five_prime_UTR 35.0%
!! TTTTATTGGTGCTTACGAGA+GGG - chr7_2:6416615-6416634 Msa1046080:five_prime_UTR 35.0%
! GGGTGAATTTAGGACTAAAT+AGG - chr7_2:6416635-6416654 Msa1046080:five_prime_UTR 35.0%
! AACTCTGAAAATTGTAGGCT+TGG - chr7_2:6416761-6416780 Msa1046080:intron 35.0%
! ACTCTGAAAATTGTAGGCTT+GGG - chr7_2:6416762-6416781 Msa1046080:intron 35.0%
CATCATGACTGAACTTTACA+AGG - chr7_2:6417354-6417373 Msa1046080:five_prime_UTR 35.0%
GAACTTTACAAGGTCATTCA+CGG - chr7_2:6417364-6417383 Msa1046080:five_prime_UTR 35.0%
GGCCAATTTAAATGTGATTG+TGG - chr7_2:6417439-6417458 Msa1046080:intron 35.0%
! TTGTGGACAAGTTTTTGAAC+AGG - chr7_2:6417456-6417475 Msa1046080:intron 35.0%
TGTGCTTATGGATATCATGA+TGG - chr7_2:6417510-6417529 Msa1046080:intron 35.0%
! TGGTAGTTTCTTTTGTTCAC+AGG - chr7_2:6417563-6417582 Msa1046080:intron 35.0%
ACTCTCCAATTAATGCAACA+TGG - chr7_2:6417723-6417742 Msa1046080:five_prime_UTR 35.0%
TCCAATTAATGCAACATGGA+TGG - chr7_2:6417727-6417746 Msa1046080:five_prime_UTR 35.0%
TCCATCCATGTTGCATTAAT+TGG + chr7_2:6417731-6417750 None:intergenic 35.0%
!! GGAATAATCGAAGCATTTTC+TGG - chr7_2:6417919-6417938 Msa1046080:five_prime_UTR 35.0%
TTGCAAATTGGTCGATCTAC+AGG + chr7_2:6413109-6413128 None:intergenic 40.0%
TGTAGATCGACCAATTTGCA+AGG - chr7_2:6413108-6413127 Msa1046080:three_prime_UTR 40.0%
GTAGATCGACCAATTTGCAA+GGG - chr7_2:6413109-6413128 Msa1046080:three_prime_UTR 40.0%
GCAGTAAAAGTTTATCGGGA+AGG + chr7_2:6413270-6413289 None:intergenic 40.0%
! AGAGTACCTTTGATTGTGTC+AGG - chr7_2:6413295-6413314 Msa1046080:three_prime_UTR 40.0%
GAGTACCTTTGATTGTGTCA+GGG - chr7_2:6413296-6413315 Msa1046080:three_prime_UTR 40.0%
! GCTGCATTATTTCTTGCTTG+TGG - chr7_2:6413352-6413371 Msa1046080:three_prime_UTR 40.0%
TTGTCAGTAGCAGTTATGTG+TGG - chr7_2:6413419-6413438 Msa1046080:exon 40.0%
GTTTCAGCTTGAATAGGAGA+TGG + chr7_2:6413643-6413662 None:intergenic 40.0%
! TCCTTGTTTGTGTTTGTTGC+CGG + chr7_2:6413714-6413733 None:intergenic 40.0%
AGGTGATGCTAATGTTGATG+AGG + chr7_2:6414052-6414071 None:intergenic 40.0%
TCATCAACATTAGCATCACC+TGG - chr7_2:6414051-6414070 Msa1046080:intron 40.0%
CAATCTATGTGTGCAGGATA+CGG + chr7_2:6414163-6414182 None:intergenic 40.0%
GTGAACTCCTTGAACATTTC+CGG + chr7_2:6414705-6414724 None:intergenic 40.0%
AAAATTGTTCTACGGAAGGG+AGG - chr7_2:6414949-6414968 Msa1046080:intron 40.0%
AGTGAAAGGGTTGAATCCAT+AGG + chr7_2:6415069-6415088 None:intergenic 40.0%
TATAAAACGGCTGAGACAGT+GGG + chr7_2:6415096-6415115 None:intergenic 40.0%
TGCCTTTGTCATTAGGACTT+AGG - chr7_2:6415202-6415221 Msa1046080:intron 40.0%
GCAGTAAAGTCCAGCATAAA+AGG + chr7_2:6415414-6415433 None:intergenic 40.0%
GAGAACTAAGCCTAACTAGA+GGG - chr7_2:6415562-6415581 Msa1046080:intron 40.0%
AGAAATTTATCTGGGCCCTA+GGG + chr7_2:6416030-6416049 None:intergenic 40.0%
TAGAAATTTATCTGGGCCCT+AGG + chr7_2:6416031-6416050 None:intergenic 40.0%
AGGAAGACTGTCATCAAACT+AGG + chr7_2:6416063-6416082 None:intergenic 40.0%
AGGAATGAAGATGAAACGCA+TGG + chr7_2:6416155-6416174 None:intergenic 40.0%
AAGAAGACAGATCAAGGATG+AGG + chr7_2:6416175-6416194 None:intergenic 40.0%
GAGAGAGAAGTAGAAATGCA+TGG + chr7_2:6416211-6416230 None:intergenic 40.0%
TGCCGAAAAAAACGCTATCT+CGG - chr7_2:6416452-6416471 Msa1046080:intron 40.0%
AGGGTGAATTTCACATGAAG+TGG - chr7_2:6416520-6416539 Msa1046080:intron 40.0%
GTTTATACTAAACCTGAGGG+TGG + chr7_2:6416705-6416724 None:intergenic 40.0%
! CTCTGAAAATTGTAGGCTTG+GGG - chr7_2:6416763-6416782 Msa1046080:intron 40.0%
CTCCAACAATGTCAAATTGC+AGG - chr7_2:6416793-6416812 Msa1046080:intron 40.0%
AGCCTGCAATTTGACATTGT+TGG + chr7_2:6416798-6416817 None:intergenic 40.0%
ACAATGTCAAATTGCAGGCT+TGG - chr7_2:6416798-6416817 Msa1046080:intron 40.0%
CAATGTCAAATTGCAGGCTT+GGG - chr7_2:6416799-6416818 Msa1046080:intron 40.0%
AATGTCAAATTGCAGGCTTG+GGG - chr7_2:6416800-6416819 Msa1046080:intron 40.0%
CATTTGACATTGTTGGAGCA+TGG + chr7_2:6416828-6416847 None:intergenic 40.0%
CTCCAACAATGTCAAATGCT+TGG - chr7_2:6416830-6416849 Msa1046080:intron 40.0%
GACCAAGCATTTGACATTGT+TGG + chr7_2:6416835-6416854 None:intergenic 40.0%
ACAATGTCAAATGCTTGGTC+TGG - chr7_2:6416835-6416854 Msa1046080:intron 40.0%
CAATGTCAAATGCTTGGTCT+GGG - chr7_2:6416836-6416855 Msa1046080:intron 40.0%
AGCTATTGTTTGTGAAAGGC+AGG - chr7_2:6417040-6417059 Msa1046080:intron 40.0%
!! TCAGAGTGTGATTTTCAAGC+AGG - chr7_2:6417131-6417150 Msa1046080:intron 40.0%
TTTACAAGGTCATTCACGGT+TGG - chr7_2:6417368-6417387 Msa1046080:five_prime_UTR 40.0%
!! ATTTGGAGTTTTAGCCTTCC+TGG + chr7_2:6417419-6417438 None:intergenic 40.0%
AGGAAGGCTAAAACTCCAAA+TGG - chr7_2:6417418-6417437 Msa1046080:intron 40.0%
! TTTTTGAACAGGCAATCCCA+AGG - chr7_2:6417467-6417486 Msa1046080:intron 40.0%
! TAATGCAACATGGATGGACT+TGG - chr7_2:6417733-6417752 Msa1046080:five_prime_UTR 40.0%
CACTTCTGTCAATGAGATTG+TGG - chr7_2:6417757-6417776 Msa1046080:five_prime_UTR 40.0%
GAGGGAAAACCCTTGCAAAT+TGG + chr7_2:6413121-6413140 None:intergenic 45.0%
CAAATCCATAGCGTCTCTTG+CGG - chr7_2:6413185-6413204 Msa1046080:three_prime_UTR 45.0%
AAATCCATAGCGTCTCTTGC+GGG - chr7_2:6413186-6413205 Msa1046080:three_prime_UTR 45.0%
!! TCCATGGAGAATTTGGTGTC+AGG - chr7_2:6413209-6413228 Msa1046080:three_prime_UTR 45.0%
!! CCATGGAGAATTTGGTGTCA+GGG - chr7_2:6413210-6413229 Msa1046080:three_prime_UTR 45.0%
AGGGTAGATCCTTACAGTCA+TGG - chr7_2:6413229-6413248 Msa1046080:three_prime_UTR 45.0%
GTAGATCCTTACAGTCATGG+TGG - chr7_2:6413232-6413251 Msa1046080:three_prime_UTR 45.0%
ACCTTTGATTGTGTCAGGGT+CGG - chr7_2:6413300-6413319 Msa1046080:three_prime_UTR 45.0%
CAAGCTGAAACAGATTGGGT+AGG - chr7_2:6413652-6413671 Msa1046080:intron 45.0%
ACCGGCAACAAACACAAACA+AGG - chr7_2:6413710-6413729 Msa1046080:intron 45.0%
GGCAACAAACACAAACAAGG+AGG - chr7_2:6413713-6413732 Msa1046080:intron 45.0%
!! AAAAGGAAGGGCATCAAACC+AGG + chr7_2:6414072-6414091 None:intergenic 45.0%
CGTATCCTGCACACATAGAT+TGG - chr7_2:6414161-6414180 Msa1046080:CDS 45.0%
CTAGTCGTCTACATCACCAT+AGG + chr7_2:6414562-6414581 None:intergenic 45.0%
TGAACATTTCCGGTGCACTA+AGG + chr7_2:6414695-6414714 None:intergenic 45.0%
TAGTGCACCGGAAATGTTCA+AGG - chr7_2:6414695-6414714 Msa1046080:intron 45.0%
AAGGGAGGAAAGTGGCATAA+TGG - chr7_2:6414964-6414983 Msa1046080:intron 45.0%
TCTCACCAAGCATTAGAAGC+AGG + chr7_2:6415027-6415046 None:intergenic 45.0%
GACAGTGGGATACAGTGAAA+GGG + chr7_2:6415082-6415101 None:intergenic 45.0%
AGACAGTGGGATACAGTGAA+AGG + chr7_2:6415083-6415102 None:intergenic 45.0%
CTATAAAACGGCTGAGACAG+TGG + chr7_2:6415097-6415116 None:intergenic 45.0%
TTATTGCACGTCACATGCAG+TGG - chr7_2:6415540-6415559 Msa1046080:intron 45.0%
GGAGAACTAAGCCTAACTAG+AGG - chr7_2:6415561-6415580 Msa1046080:intron 45.0%
TTCCTCAAGTCCCTCTAGTT+AGG + chr7_2:6415575-6415594 None:intergenic 45.0%
GAAATTTATCTGGGCCCTAG+GGG + chr7_2:6416029-6416048 None:intergenic 45.0%
CTTCCTTCTTTCCTCATGTG+CGG - chr7_2:6416077-6416096 Msa1046080:intron 45.0%
GCTGGAAGAAGAAGAAGACA+GGG + chr7_2:6416133-6416152 None:intergenic 45.0%
ATGAAGATGAAACGCATGGC+TGG + chr7_2:6416151-6416170 None:intergenic 45.0%
GAGAAGTAGAAATGCATGGC+TGG + chr7_2:6416207-6416226 None:intergenic 45.0%
GCCGAAAAAAACGCTATCTC+GGG - chr7_2:6416453-6416472 Msa1046080:intron 45.0%
!!! GCCCGAGATAGCGTTTTTTT+CGG + chr7_2:6416457-6416476 None:intergenic 45.0%
GCTTACGAGAGGGTGAATTT+AGG - chr7_2:6416625-6416644 Msa1046080:five_prime_UTR 45.0%
GCTAAAATTAAGCCACCCTC+AGG - chr7_2:6416690-6416709 Msa1046080:intron 45.0%
ACTGAACGTTCGTGGGTAGA+GGG + chr7_2:6413139-6413158 None:intergenic 50.0%
AACTGAACGTTCGTGGGTAG+AGG + chr7_2:6413140-6413159 None:intergenic 50.0%
TTGCGGGTCCATGGAGAATT+TGG - chr7_2:6413202-6413221 Msa1046080:three_prime_UTR 50.0%
CCCTGACACCAAATTCTCCA+TGG + chr7_2:6413213-6413232 None:intergenic 50.0%
CAAGGTCCACCATGACTGTA+AGG + chr7_2:6413241-6413260 None:intergenic 50.0%
CGATGGAGCAAACACACACA+AGG + chr7_2:6413468-6413487 None:intergenic 50.0%
AATGCAGAGGGATGAGACGA+TGG + chr7_2:6413485-6413504 None:intergenic 50.0%
!! CAGGATACGGACTGGTCTTA+TGG + chr7_2:6414150-6414169 None:intergenic 50.0%
TATGTGTGCAGGATACGGAC+TGG + chr7_2:6414158-6414177 None:intergenic 50.0%
TTCTACGGAAGGGAGGAAAG+TGG - chr7_2:6414956-6414975 Msa1046080:intron 50.0%
AGCCTAACTAGAGGGACTTG+AGG - chr7_2:6415570-6415589 Msa1046080:intron 50.0%
GGCTGGAAGAAGAAGAAGAC+AGG + chr7_2:6416134-6416153 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr7_2:6416243-6416262 None:intergenic 50.0%
! GCTTTTGACCGCATCAAGAC+CGG - chr7_2:6416354-6416373 Msa1046080:intron 50.0%
ACAGCTGCACTAAATGCACC+AGG - chr7_2:6417398-6417417 Msa1046080:five_prime_UTR 50.0%
CTGCACTAAATGCACCAGGA+AGG - chr7_2:6417402-6417421 Msa1046080:five_prime_UTR 50.0%
TTATCGGGAAGGAGCGAGCA+AGG + chr7_2:6413259-6413278 None:intergenic 55.0%
GCCGACCCTGACACAATCAA+AGG + chr7_2:6413304-6413323 None:intergenic 55.0%
GCAGAGCAACCTTAGTGCAC+CGG - chr7_2:6414683-6414702 Msa1046080:intron 55.0%
GTCAAAGCGGAAATTCGGCG+CGG - chr7_2:6415663-6415682 Msa1046080:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr7_2:6415689-6415708 Msa1046080:intron 55.0%
!! GCGGGCGATATTTGATGACG+CGG - chr7_2:6415731-6415750 Msa1046080:intron 55.0%
! AGTATTGGGCCTTAGCCCCT+AGG - chr7_2:6416011-6416030 Msa1046080:intron 55.0%
GTATTGGGCCTTAGCCCCTA+GGG - chr7_2:6416012-6416031 Msa1046080:intron 55.0%
CAGCCGCACATGAGGAAAGA+AGG + chr7_2:6416083-6416102 None:intergenic 55.0%
!! GTGGTGGTAGCGGTCAATTG+CGG + chr7_2:6416400-6416419 None:intergenic 55.0%
AGCGTGTCTAGTGGTGGTAG+CGG + chr7_2:6416410-6416429 None:intergenic 55.0%
TACCACCACTAGACACGCTC+CGG - chr7_2:6416411-6416430 Msa1046080:intron 55.0%
GAGAACCAAGCCTCGCTAGA+GGG - chr7_2:6416542-6416561 Msa1046080:intron 55.0%
TGGACCCGCAAGAGACGCTA+TGG + chr7_2:6413193-6413212 None:intergenic 60.0%
TAGCGTCTCTTGCGGGTCCA+TGG - chr7_2:6413193-6413212 Msa1046080:three_prime_UTR 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr7_2:6415694-6415713 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr7_2:6415697-6415716 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr7_2:6415694-6415713 Msa1046080:intron 60.0%
! CCCGCGCCGCGTCAATTTTT+GGG + chr7_2:6415698-6415717 None:intergenic 60.0%
CCCAAAAATTGACGCGGCGC+GGG - chr7_2:6415695-6415714 Msa1046080:intron 60.0%
! TCCCGCGCCGCGTCAATTTT+TGG + chr7_2:6415699-6415718 None:intergenic 60.0%
TATCTGGGCCCTAGGGGCTA+AGG + chr7_2:6416023-6416042 None:intergenic 60.0%
! ACCTCCGCGTTGATCTGTGC+CGG + chr7_2:6416433-6416452 None:intergenic 60.0%
GGAGAACCAAGCCTCGCTAG+AGG - chr7_2:6416541-6416560 Msa1046080:intron 60.0%
CAAGTCCCTCTAGCGAGGCT+TGG + chr7_2:6416550-6416569 None:intergenic 60.0%
AGCCTCGCTAGAGGGACTTG+AGG - chr7_2:6416550-6416569 Msa1046080:intron 60.0%
CTCCTCAAGTCCCTCTAGCG+AGG + chr7_2:6416555-6416574 None:intergenic 60.0%
GTCAGGGTCGGCGCGTTTCA+TGG - chr7_2:6413312-6413331 Msa1046080:three_prime_UTR 65.0%
AGGGTCGGCGCGTTTCATGG+CGG - chr7_2:6413315-6413334 Msa1046080:three_prime_UTR 65.0%
AATTGACGCGGCGCGGGATG+CGG - chr7_2:6415701-6415720 Msa1046080:intron 65.0%
AGAAGCGGCAGCCGCACATG+AGG + chr7_2:6416091-6416110 None:intergenic 65.0%
GATGCGGGCCGGTCTTGATG+CGG + chr7_2:6416365-6416384 None:intergenic 65.0%
! CGCTTTTCGTCGATGCGGGC+CGG + chr7_2:6416376-6416395 None:intergenic 65.0%
! CGGCCCGCATCGACGAAAAG+CGG - chr7_2:6416374-6416393 Msa1046080:intron 65.0%
!!! CGGCCGCTTTTCGTCGATGC+GGG + chr7_2:6416380-6416399 None:intergenic 65.0%
!!! GCGGCCGCTTTTCGTCGATG+CGG + chr7_2:6416381-6416400 None:intergenic 65.0%
TGCCGGAGCGTGTCTAGTGG+TGG + chr7_2:6416416-6416435 None:intergenic 65.0%
CTGTGCCGGAGCGTGTCTAG+TGG + chr7_2:6416419-6416438 None:intergenic 65.0%
CGCTCCGGCACAGATCAACG+CGG - chr7_2:6416426-6416445 Msa1046080:intron 65.0%
TCCGGCACAGATCAACGCGG+AGG - chr7_2:6416429-6416448 Msa1046080:intron 65.0%
ACGCTATCTCGGGCGCGAAG+CGG - chr7_2:6416463-6416482 Msa1046080:intron 65.0%
AGCGGAAATTCGGCGCGGCG+CGG - chr7_2:6415668-6415687 Msa1046080:intron 70.0%
ATTGACGCGGCGCGGGATGC+GGG - chr7_2:6415702-6415721 Msa1046080:intron 70.0%
CGCTATCTCGGGCGCGAAGC+GGG - chr7_2:6416464-6416483 Msa1046080:intron 70.0%
TATCTCGGGCGCGAAGCGGG+CGG - chr7_2:6416467-6416486 Msa1046080:intron 70.0%
CGCGGGATGCGGGAGCGAAG+CGG - chr7_2:6415712-6415731 Msa1046080:intron 75.0%
GCGGGATGCGGGAGCGAAGC+GGG - chr7_2:6415713-6415732 Msa1046080:intron 75.0%
! CGGGCGCGAAGCGGGCGGCG+CGG - chr7_2:6416472-6416491 Msa1046080:intron 90.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 6413034 6418008 6413034 ID=Msa1046080;Name=Msa1046080
chr7_2 mRNA 6413034 6418008 6413034 ID=Msa1046080-mRNA-1;Parent=Msa1046080;Name=Msa1046080-mRNA-1;_AED=0.35;_eAED=0.39;_QI=550|0.6|0.66|1|0.4|0.5|6|387|66
chr7_2 exon 6413034 6413457 6413034 ID=Msa1046080-mRNA-1:exon:1492;Parent=Msa1046080-mRNA-1
chr7_2 exon 6413554 6413640 6413554 ID=Msa1046080-mRNA-1:exon:1491;Parent=Msa1046080-mRNA-1
chr7_2 exon 6414128 6414264 6414128 ID=Msa1046080-mRNA-1:exon:1490;Parent=Msa1046080-mRNA-1
chr7_2 exon 6416599 6416662 6416599 ID=Msa1046080-mRNA-1:exon:1489;Parent=Msa1046080-mRNA-1
chr7_2 exon 6417308 6417425 6417308 ID=Msa1046080-mRNA-1:exon:1488;Parent=Msa1046080-mRNA-1
chr7_2 exon 6417701 6418008 6417701 ID=Msa1046080-mRNA-1:exon:1487;Parent=Msa1046080-mRNA-1
chr7_2 five_prime_UTR 6417701 6418008 6417701 ID=Msa1046080-mRNA-1:five_prime_utr;Parent=Msa1046080-mRNA-1
chr7_2 five_prime_UTR 6417308 6417425 6417308 ID=Msa1046080-mRNA-1:five_prime_utr;Parent=Msa1046080-mRNA-1
chr7_2 five_prime_UTR 6416599 6416662 6416599 ID=Msa1046080-mRNA-1:five_prime_utr;Parent=Msa1046080-mRNA-1
chr7_2 five_prime_UTR 6414205 6414264 6414205 ID=Msa1046080-mRNA-1:five_prime_utr;Parent=Msa1046080-mRNA-1
chr7_2 CDS 6414128 6414204 6414128 ID=Msa1046080-mRNA-1:cds;Parent=Msa1046080-mRNA-1
chr7_2 CDS 6413554 6413640 6413554 ID=Msa1046080-mRNA-1:cds;Parent=Msa1046080-mRNA-1
chr7_2 CDS 6413421 6413457 6413421 ID=Msa1046080-mRNA-1:cds;Parent=Msa1046080-mRNA-1
chr7_2 three_prime_UTR 6413034 6413420 6413034 ID=Msa1046080-mRNA-1:three_prime_utr;Parent=Msa1046080-mRNA-1
Gene Sequence

>Msa1046080

ATGTCAAATGCTTGGTCTGGGTCTAAACTGTTTATTAATGATGATTCCATTGAGGAACTCAAACAATTTAAGGAAAGCTGCACTAAATGCACCAGGAAGGCTAAAACTCCAAATGGCCAATTTAAATGTGATTGTGGACAAGTTTTTGAACAGGCAATCCCAAGGTACAAATTTCCAATTGTAGGTCTTTTTATCAAGTAG
Protein sequence

>Msa1046080

MSNAWSGSKLFINDDSIEELKQFKESCTKCTRKAKTPNGQFKCDCGQVFEQAIPRYKFPIVGLFIK*