AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050010 MtrunA17_Chr7g0218831 82.339 419 34 1 1 379 22 440 0.0 694
Msa1050010 MtrunA17_Chr7g0218841 81.667 420 36 2 1 379 22 441 0.0 688
Msa1050010 MtrunA17_Chr7g0218811 62.530 419 116 2 1 378 31 449 0.0 522
Msa1050010 MtrunA17_Chr7g0218821 59.302 430 123 3 1 378 21 450 1.41e-179 506
Msa1050010 MtrunA17_Chr7g0218791 50.585 427 159 6 1 378 21 444 2.65e-148 427
Msa1050010 MtrunA17_Chr5g0448551 31.164 292 186 8 36 315 60 348 7.01e-38 141
Msa1050010 MtrunA17_Chr7g0249981 29.674 337 198 11 1 315 41 360 1.45e-35 135
Msa1050010 MtrunA17_Chr3g0118661 29.745 353 206 8 1 315 29 377 1.60e-34 132
Msa1050010 MtrunA17_Chr3g0078841 24.945 453 258 11 1 375 26 474 1.33e-33 130
Msa1050010 MtrunA17_Chr6g0464871 26.077 441 246 12 1 376 39 464 1.78e-33 129
Msa1050010 MtrunA17_Chr6g0454181 24.615 455 259 11 1 375 26 476 3.50e-33 129
Msa1050010 MtrunA17_Chr4g0053501 26.067 445 251 14 1 376 27 462 3.60e-33 129
Msa1050010 MtrunA17_Chr6g0454341 24.945 453 258 11 1 375 26 474 2.07e-32 127
Msa1050010 MtrunA17_Chr6g0453961 25.821 457 252 14 1 375 35 486 2.87e-32 126
Msa1050010 MtrunA17_Chr4g0053321 26.018 442 255 11 1 376 42 477 5.90e-32 125
Msa1050010 MtrunA17_Chr6g0454151 27.859 341 211 10 10 315 35 375 6.59e-32 125
Msa1050010 MtrunA17_Chr5g0426431 30.233 344 198 9 9 315 37 375 7.71e-32 125
Msa1050010 MtrunA17_Chr6g0454261 25.055 455 257 13 1 375 26 476 1.01e-31 125
Msa1050010 MtrunA17_Chr8g0336331 24.835 455 255 12 1 375 26 473 1.07e-31 125
Msa1050010 MtrunA17_Chr6g0454191 25.219 456 256 14 1 375 26 477 1.94e-31 124
Msa1050010 MtrunA17_Chr6g0454321 27.635 351 217 10 1 315 26 375 2.63e-31 125
Msa1050010 MtrunA17_Chr3g0118691 25.991 454 252 12 1 375 31 479 3.37e-31 123
Msa1050010 MtrunA17_Chr6g0454401 25.821 457 252 15 1 375 26 477 4.49e-31 123
Msa1050010 MtrunA17_Chr6g0454301 25.217 460 248 14 1 375 279 727 7.16e-31 124
Msa1050010 MtrunA17_Chr6g0454301 36.220 127 69 2 201 315 1 127 3.37e-18 86.7
Msa1050010 MtrunA17_Chr7g0217881 25.346 434 244 13 11 375 36 458 8.84e-31 122
Msa1050010 MtrunA17_Chr6g0454141 24.622 463 249 15 1 375 26 476 1.01e-30 122
Msa1050010 MtrunA17_Chr2g0278711 26.049 453 253 14 1 376 27 474 3.06e-30 120
Msa1050010 MtrunA17_Chr3g0118671 28.571 350 215 9 1 315 22 371 3.54e-30 120
Msa1050010 MtrunA17_Chr8g0359821 27.654 358 208 11 1 315 26 375 6.97e-30 120
Msa1050010 MtrunA17_Chr3g0118701 25.771 454 253 12 1 375 31 479 1.85e-29 119
Msa1050010 MtrunA17_Chr6g0464861 25.734 443 244 14 1 376 27 451 2.29e-29 118
Msa1050010 MtrunA17_Chr6g0453951 23.060 451 271 9 1 375 73 523 2.30e-29 119
Msa1050010 MtrunA17_Chr5g0414321 25.280 447 237 15 1 375 27 448 4.86e-29 117
Msa1050010 MtrunA17_Chr6g0454361 24.379 443 259 11 10 376 36 478 5.49e-29 117
Msa1050010 MtrunA17_Chr6g0454291 23.198 444 261 11 10 375 32 473 1.24e-28 116
Msa1050010 MtrunA17_Chr6g0452771 25.948 343 217 8 10 315 35 377 1.28e-28 116
Msa1050010 MtrunA17_Chr5g0412111 28.448 348 208 8 1 315 21 360 2.05e-28 115
Msa1050010 MtrunA17_Chr3g0118771 27.066 351 219 10 1 315 37 386 2.36e-28 115
Msa1050010 MtrunA17_Chr5g0414331 26.244 442 243 15 1 377 29 452 2.86e-28 115
Msa1050010 MtrunA17_Chr3g0092641 29.143 350 194 10 9 315 37 375 3.04e-28 115
Msa1050010 MtrunA17_Chr6g0464841 27.324 355 181 10 86 376 111 452 4.91e-28 114
Msa1050010 MtrunA17_Chr1g0207981 24.612 451 254 13 1 375 29 469 7.50e-28 114
Msa1050010 MtrunA17_Chr6g0454331 24.017 458 262 11 1 376 23 476 9.88e-28 114
Msa1050010 MtrunA17_Chr5g0423981 24.605 443 239 13 1 375 26 441 1.08e-27 113
Msa1050010 MtrunA17_Chr7g0250001 22.248 436 265 11 1 375 22 444 1.29e-27 113
Msa1050010 MtrunA17_Chr6g0454251 24.432 352 229 9 1 315 23 374 3.02e-27 111
Msa1050010 MtrunA17_Chr3g0118711 24.890 454 257 13 1 375 29 477 4.60e-27 112
Msa1050010 MtrunA17_Chr6g0454121 25.221 452 241 15 10 375 35 475 4.62e-27 112
Msa1050010 MtrunA17_Chr6g0454131 25.111 450 244 13 10 375 35 475 4.79e-27 112
Msa1050010 MtrunA17_Chr6g0464881 24.318 440 255 13 1 376 27 452 6.18e-27 111
Msa1050010 MtrunA17_Chr6g0454211 25.364 343 219 9 10 315 322 664 8.68e-27 112
Msa1050010 MtrunA17_Chr6g0454211 27.941 204 94 5 189 379 105 268 1.77e-15 78.2
Msa1050010 MtrunA17_Chr3g0118751 26.037 434 248 13 1 375 22 441 8.25e-26 108
Msa1050010 MtrunA17_Chr6g0464921 24.444 450 243 16 1 376 27 453 1.38e-25 107
Msa1050010 MtrunA17_Chr8g0336651 25.570 395 203 12 64 379 863 1245 2.22e-25 108
Msa1050010 MtrunA17_Chr8g0336651 29.433 282 148 10 69 315 93 358 3.49e-18 86.7
Msa1050010 MtrunA17_Chr8g0336651 25.191 262 127 7 170 379 532 776 3.07e-16 80.9
Msa1050010 MtrunA17_Chr3g0112761 26.712 438 243 18 1 375 24 446 3.06e-25 106
Msa1050010 MtrunA17_Chr5g0401721 25.877 456 247 18 1 376 24 468 4.22e-25 106
Msa1050010 MtrunA17_Chr6g0454221 31.004 229 102 5 201 375 1 227 8.12e-25 102
Msa1050010 MtrunA17_Chr7g0249931 26.627 338 210 10 1 316 56 377 9.06e-25 105
Msa1050010 MtrunA17_Chr6g0454201 24.664 446 252 13 10 375 36 477 1.01e-24 105
Msa1050010 MtrunA17_Chr3g0112771 24.256 437 255 15 1 376 28 449 1.62e-24 104
Msa1050010 MtrunA17_Chr8g0336691 24.292 424 225 12 40 379 64 475 1.62e-23 102
Msa1050010 MtrunA17_Chr8g0336691 24.427 393 208 10 64 379 1001 1381 5.29e-23 101
Msa1050010 MtrunA17_Chr8g0336691 24.211 380 197 11 64 379 562 914 2.84e-17 84.0
Msa1050010 MtrunA17_Chr8g0334851 28.617 311 180 12 36 315 64 363 2.17e-23 101
Msa1050010 MtrunA17_Chr7g0232401 24.129 402 226 14 40 374 74 463 9.86e-23 99.4
Msa1050010 MtrunA17_Chr8g0380531 23.690 439 261 13 1 375 26 454 1.46e-22 99.0
Msa1050010 MtrunA17_Chr6g0454271 28.226 248 117 7 186 375 39 283 1.62e-22 96.3
Msa1050010 MtrunA17_Chr8g0377921 24.586 362 197 10 85 375 104 460 1.94e-22 98.6
Msa1050010 MtrunA17_Chr8g0335161 28.485 330 181 12 36 326 62 375 5.20e-22 97.1
Msa1050010 MtrunA17_Chr6g0459311 27.303 304 183 8 35 315 76 364 5.51e-22 97.1
Msa1050010 MtrunA17_Chr8g0334861 29.897 291 159 10 56 316 83 358 1.31e-21 95.9
Msa1050010 MtrunA17_Chr7g0232411 27.857 280 172 9 61 315 85 359 1.40e-21 95.9
Msa1050010 MtrunA17_Chr4g0050341 22.678 463 260 14 1 375 35 487 1.88e-21 95.9
Msa1050010 MtrunA17_Chr7g0275511 23.454 388 224 11 61 379 94 477 1.97e-21 95.5
Msa1050010 MtrunA17_Chr5g0412131 24.944 449 257 14 1 377 28 468 3.41e-21 94.7
Msa1050010 MtrunA17_Chr5g0393591 24.178 426 246 15 1 375 33 432 4.37e-21 94.4
Msa1050010 MtrunA17_Chr1g0153451 24.031 387 204 10 69 379 93 465 8.14e-21 93.6
Msa1050010 MtrunA17_Chr8g0373301 22.680 388 227 12 55 374 80 462 9.41e-21 93.6
Msa1050010 MtrunA17_Chr8g0336731 28.671 286 145 10 69 315 119 384 9.47e-21 93.6
Msa1050010 MtrunA17_Chr8g0347281 27.479 353 200 15 1 316 34 367 1.30e-20 93.2
Msa1050010 MtrunA17_Chr5g0412101 23.991 446 266 13 1 377 28 469 1.76e-20 92.8
Msa1050010 MtrunA17_Chr8g0336741 27.835 291 165 8 57 315 88 365 1.97e-20 92.4
Msa1050010 MtrunA17_Chr7g0249961 41.270 126 58 4 203 316 33 154 2.09e-20 90.1
Msa1050010 MtrunA17_Chr7g0232391 23.969 388 221 11 61 379 85 467 3.14e-20 92.0
Msa1050010 MtrunA17_Chr7g0250021 26.480 321 194 12 1 298 28 329 1.02e-19 89.0
Msa1050010 MtrunA17_Chr3g0098111 26.991 226 108 8 207 375 241 466 2.02e-19 89.7
Msa1050010 MtrunA17_Chr7g0243681 24.512 461 245 17 4 375 30 476 2.14e-19 89.7
Msa1050010 MtrunA17_Chr8g0347271 25.926 351 208 14 1 316 35 368 3.30e-19 89.0
Msa1050010 MtrunA17_Chr8g0339631 24.318 403 224 14 47 374 68 464 4.08e-19 88.6
Msa1050010 MtrunA17_Chr8g0339451 24.250 400 223 15 47 374 68 459 4.20e-19 88.6
Msa1050010 MtrunA17_Chr5g0426401 35.878 131 79 2 190 315 78 208 4.79e-19 87.0
Msa1050010 MtrunA17_Chr8g0339461 24.586 362 197 13 85 374 110 467 6.89e-19 88.2
Msa1050010 MtrunA17_Chr6g0486251 25.070 359 202 12 1 315 22 357 1.17e-18 87.4
Msa1050010 MtrunA17_Chr6g0486201 25.070 359 202 12 1 315 22 357 1.17e-18 87.4
Msa1050010 MtrunA17_Chr8g0339441 26.361 349 158 12 88 374 114 425 1.38e-18 87.0
Msa1050010 MtrunA17_Chr7g0232331 27.857 280 172 10 61 315 85 359 1.82e-18 86.7
Msa1050010 MtrunA17_Chr4g0032331 25.959 339 214 12 1 315 24 349 2.10e-18 86.3
Msa1050010 MtrunA17_Chr8g0365811 26.437 348 218 12 1 315 25 367 2.30e-18 87.0
Msa1050010 MtrunA17_Chr8g0365811 24.289 457 251 17 1 375 511 954 1.31e-17 84.7
Msa1050010 MtrunA17_Chr8g0335141 27.931 290 171 9 69 326 94 377 2.73e-18 86.3
Msa1050010 MtrunA17_Chr4g0044511 26.225 347 212 16 3 316 58 393 3.36e-18 86.3
Msa1050010 MtrunA17_Chr6g0449931 25.126 398 219 14 48 374 74 463 4.13e-18 85.5
Msa1050010 MtrunA17_Chr6g0462521 27.778 216 101 6 202 367 229 439 4.95e-18 85.5
Msa1050010 MtrunA17_Chr7g0243871 23.556 450 258 11 4 375 28 469 5.05e-18 85.5
Msa1050010 MtrunA17_Chr1g0207861 25.788 349 213 12 1 315 24 360 7.45e-18 85.1
Msa1050010 MtrunA17_Chr6g0453981 30.476 210 114 7 94 276 1 205 1.45e-17 81.3
Msa1050010 MtrunA17_Chr6g0462531 23.529 391 209 14 64 374 80 460 2.74e-17 83.2
Msa1050010 MtrunA17_Chr6g0462541 23.913 368 197 12 76 374 106 459 3.41e-17 82.8
Msa1050010 MtrunA17_Chr4g0044521 25.294 340 210 13 4 315 28 351 4.01e-17 82.8
Msa1050010 MtrunA17_Chr1g0207951 24.225 355 192 13 85 375 764 1105 4.92e-17 83.2
Msa1050010 MtrunA17_Chr1g0207951 23.901 364 198 13 77 375 218 567 2.68e-16 80.9
Msa1050010 MtrunA17_Chr8g0377941 24.650 357 192 12 85 375 113 458 5.70e-17 82.4
Msa1050010 MtrunA17_Chr1g0161351 25.287 348 216 12 1 315 53 389 6.89e-17 82.0
Msa1050010 MtrunA17_Chr5g0403641 34.568 162 69 6 187 315 237 394 7.97e-17 82.0
Msa1050010 MtrunA17_Chr5g0431441 22.844 429 249 13 14 375 49 462 8.05e-17 81.6
Msa1050010 MtrunA17_Chr6g0462571 22.472 356 200 10 85 374 112 457 8.40e-17 81.6
Msa1050010 MtrunA17_Chr7g0232341 26.596 282 173 7 61 315 85 359 8.61e-17 81.6
Msa1050010 MtrunA17_Chr1g0207831 26.531 343 208 14 3 315 26 354 8.69e-17 81.6
Msa1050010 MtrunA17_Chr1g0207931 35.537 121 66 4 207 315 269 389 1.04e-16 81.6
Msa1050010 MtrunA17_Chr7g0243631 24.678 466 243 18 4 375 32 483 1.15e-16 81.3
Msa1050010 MtrunA17_Chr7g0275681 27.401 354 200 15 1 315 28 363 2.08e-16 80.5
Msa1050010 MtrunA17_Chr1g0153461 43.269 104 43 4 228 315 3 106 2.58e-16 77.4
Msa1050010 MtrunA17_Chr5g0419761 27.734 256 151 10 86 315 120 367 5.32e-16 79.3
Msa1050010 MtrunA17_Chr8g0339601 40.157 127 56 6 208 315 99 224 5.44e-16 78.2
Msa1050010 MtrunA17_Chr1g0207971 22.646 446 255 14 1 375 24 450 6.02e-16 79.0
Msa1050010 MtrunA17_Chr8g0367221 26.221 389 239 16 1 356 28 401 1.11e-15 79.0
Msa1050010 MtrunA17_Chr8g0367221 24.682 393 241 16 1 356 814 1188 1.41e-14 75.9
Msa1050010 MtrunA17_Chr8g0367221 26.608 342 217 14 1 315 1304 1638 2.77e-13 71.6
Msa1050010 MtrunA17_Chr6g0462551 26.906 223 111 6 202 374 240 460 1.19e-15 78.2
Msa1050010 MtrunA17_Chr3g0118721 36.634 101 60 2 219 315 87 187 2.57e-15 75.9
Msa1050010 MtrunA17_Chr2g0329111 22.000 450 259 16 14 378 37 479 3.50e-15 77.0
Msa1050010 MtrunA17_Chr7g0232311 21.411 397 235 12 49 376 73 461 5.47e-15 76.3
Msa1050010 MtrunA17_Chr6g0454171 33.813 139 61 4 189 315 88 207 5.72e-15 75.1
Msa1050010 MtrunA17_Chr4g0044481 28.251 223 132 8 112 316 143 355 9.58e-15 75.1
Msa1050010 MtrunA17_Chr7g0243771 23.312 459 254 18 4 375 25 472 2.59e-14 74.3
Msa1050010 MtrunA17_Chr7g0232351 31.977 172 86 7 170 315 192 358 2.98e-14 73.6
Msa1050010 MtrunA17_Chr8g0366391 26.257 358 207 18 1 316 25 367 6.90e-14 72.8
Msa1050010 MtrunA17_Chr7g0243801 23.529 459 253 19 4 375 26 473 7.95e-14 72.8
Msa1050010 MtrunA17_Chr8g0370941 31.016 187 82 6 175 326 220 394 1.55e-13 72.0
Msa1050010 MtrunA17_Chr7g0241781 27.711 332 192 16 1 315 25 325 3.33e-13 70.5
Msa1050010 MtrunA17_Chr5g0440421 30.968 155 82 6 186 315 228 382 3.45e-13 70.9
Msa1050010 MtrunA17_Chr7g0243761 25.676 444 236 22 4 375 30 451 3.87e-13 70.5
Msa1050010 MtrunA17_Chr4g0060511 22.833 473 246 20 4 375 30 484 4.99e-13 70.1
Msa1050010 MtrunA17_Chr6g0453941 34.483 116 70 2 162 276 148 258 6.42e-13 68.6
Msa1050010 MtrunA17_Chr8g0361371 23.958 288 172 10 61 315 86 359 8.12e-13 69.7
Msa1050010 MtrunA17_Chr7g0243811 25.439 342 204 16 4 313 8 330 8.61e-13 69.3
Msa1050010 MtrunA17_Chr5g0448521 22.063 349 224 12 1 315 21 355 9.75e-13 69.3
Msa1050010 MtrunA17_Chr5g0429711 26.012 346 209 14 1 316 27 355 1.07e-12 69.3
Msa1050010 MtrunA17_Chr4g0072771 23.167 341 203 13 85 375 131 462 1.17e-12 68.9
Msa1050010 MtrunA17_Chr4g0072761 26.866 268 177 12 57 315 92 349 1.23e-12 68.9
Msa1050010 MtrunA17_Chr7g0241801 42.222 90 48 3 227 315 239 325 3.29e-12 67.4
Msa1050010 MtrunA17_Chr5g0429681 25.836 329 205 14 14 316 80 395 4.60e-12 67.4
Msa1050010 MtrunA17_Chr7g0265141 27.413 259 148 11 86 315 120 367 4.71e-12 67.4
Msa1050010 MtrunA17_Chr1g0173121 25.731 171 96 3 169 315 191 354 6.40e-12 66.6
Msa1050010 MtrunA17_Chr8g0334841 32.394 142 77 4 161 286 6 144 7.68e-12 63.5
Msa1050010 MtrunA17_Chr7g0243781 25.797 345 200 15 4 311 28 353 8.61e-12 66.2
Msa1050010 MtrunA17_Chr7g0243611 30.769 156 86 6 176 311 71 224 9.07e-12 65.5
Msa1050010 MtrunA17_Chr7g0265041 25.356 351 219 13 1 315 27 370 1.30e-11 65.9
Msa1050010 MtrunA17_Chr7g0265151 35.135 111 66 3 211 315 255 365 1.46e-11 65.9
Msa1050010 MtrunA17_Chr2g0294941 30.986 142 83 5 188 315 123 263 1.55e-11 65.1
Msa1050010 MtrunA17_Chr6g0454111 38.542 96 46 2 189 271 88 183 1.65e-11 62.8
Msa1050010 MtrunA17_Chr4g0044501 24.779 339 221 13 4 313 29 362 1.86e-11 65.5
Msa1050010 MtrunA17_Chr7g0235051 27.228 202 88 6 229 371 245 446 2.26e-11 65.1
Msa1050010 MtrunA17_Chr8g0334831 23.630 292 176 10 61 315 85 366 2.38e-11 65.1
Msa1050010 MtrunA17_Chr2g0278721 43.011 93 42 4 231 316 785 873 2.79e-11 65.5
Msa1050010 MtrunA17_Chr1g0159551 25.749 167 102 3 169 315 187 351 3.93e-11 64.3
Msa1050010 MtrunA17_Chr7g0243911 37.234 94 53 2 224 311 17 110 4.20e-11 62.4
Msa1050010 MtrunA17_Chr4g0014061 34.259 108 63 3 214 315 251 356 4.25e-11 64.3
Msa1050010 MtrunA17_Chr8g0382021 26.961 204 111 7 138 315 189 380 5.71e-11 63.9
Msa1050010 MtrunA17_Chr2g0307961 22.000 250 166 5 88 315 122 364 7.68e-11 63.5
Msa1050010 MtrunA17_Chr6g0463891 26.538 260 162 9 77 313 113 366 9.33e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050010 AT3G02100.1 32.648 438 226 9 1 377 29 458 5.32e-75 240
Msa1050010 AT1G05675.1 25.172 437 256 10 2 376 23 450 3.62e-36 137
Msa1050010 AT1G05680.1 24.943 437 257 10 2 376 23 450 4.27e-34 131
Msa1050010 AT3G46670.1 25.508 443 244 14 1 377 25 447 4.93e-34 131
Msa1050010 AT1G22360.2 29.096 354 207 10 1 315 26 374 1.07e-32 128
Msa1050010 AT1G22360.1 29.096 354 207 10 1 315 26 374 1.21e-32 128
Msa1050010 AT1G22370.2 27.536 345 219 9 1 315 29 372 1.09e-30 122
Msa1050010 AT3G46660.1 24.545 440 254 14 1 377 30 454 4.16e-30 120
Msa1050010 AT1G22400.1 28.451 355 209 11 1 315 29 378 4.59e-29 118
Msa1050010 AT3G22250.1 26.966 267 155 7 85 316 103 364 3.52e-28 115
Msa1050010 AT1G22380.1 27.684 354 212 10 1 315 29 377 4.49e-28 115
Msa1050010 AT3G55710.1 27.354 446 237 18 1 376 24 452 5.79e-28 114
Msa1050010 AT1G22340.1 26.836 354 216 12 1 315 29 378 1.32e-26 111
Msa1050010 AT1G78270.1 28.653 349 215 10 1 315 29 377 2.68e-26 110
Msa1050010 AT2G31750.1 23.820 445 254 11 1 376 24 452 5.69e-26 108
Msa1050010 AT5G59590.1 25.982 331 220 10 1 315 26 347 6.19e-26 108
Msa1050010 AT2G31750.2 23.820 445 254 11 1 376 24 452 7.26e-26 108
Msa1050010 AT3G21560.1 22.566 452 263 13 1 375 28 469 1.63e-25 108
Msa1050010 AT2G23260.1 24.227 388 227 9 47 376 73 451 5.05e-25 106
Msa1050010 AT3G55700.1 28.107 338 207 16 1 315 24 348 6.57e-25 105
Msa1050010 AT3G46680.1 26.888 331 218 11 1 315 25 347 2.98e-24 103
Msa1050010 AT5G59580.1 25.680 331 220 9 1 315 25 345 7.01e-24 102
Msa1050010 AT3G46690.1 25.758 330 223 10 1 315 25 347 7.65e-24 102
Msa1050010 AT2G23250.1 24.201 438 252 15 1 376 14 433 1.09e-23 102
Msa1050010 AT5G38040.1 25.862 348 199 15 1 315 26 347 1.63e-23 102
Msa1050010 AT3G46700.1 26.220 328 219 9 1 315 25 342 1.98e-23 101
Msa1050010 AT3G46720.1 26.769 325 217 9 1 315 25 338 2.23e-22 98.6
Msa1050010 AT4G15490.1 25.217 345 218 13 1 315 24 358 9.06e-22 97.1
Msa1050010 AT5G38010.1 26.023 342 210 11 1 315 26 351 1.35e-21 96.3
Msa1050010 AT3G11340.1 24.138 435 256 12 1 377 25 443 1.59e-21 95.9
Msa1050010 AT2G43840.2 22.727 440 256 13 2 376 24 444 2.08e-21 95.9
Msa1050010 AT4G15480.1 22.545 448 267 15 1 375 35 475 3.86e-21 95.1
Msa1050010 AT2G26480.1 24.036 337 217 11 1 315 24 343 6.33e-21 94.4
Msa1050010 AT3G46650.1 25.688 327 209 12 1 315 26 330 6.63e-21 94.0
Msa1050010 AT2G43840.1 22.727 440 256 13 2 376 24 444 8.02e-21 94.0
Msa1050010 AT5G37950.1 25.075 335 218 10 1 315 2 323 8.82e-21 92.8
Msa1050010 AT4G15550.1 23.016 378 204 12 69 375 109 470 9.59e-21 94.0
Msa1050010 AT1G22370.1 36.957 138 73 3 192 315 65 202 1.20e-20 91.7
Msa1050010 AT5G37950.2 25.225 333 214 11 1 315 2 317 1.75e-20 92.0
Msa1050010 AT5G05900.1 25.148 338 214 10 1 315 24 345 2.21e-20 92.8
Msa1050010 AT5G05880.1 23.077 442 257 15 1 377 24 447 3.35e-20 92.0
Msa1050010 AT4G15500.1 23.099 355 202 12 85 375 112 459 4.76e-20 92.0
Msa1050010 AT1G01420.2 27.035 344 207 12 5 315 32 364 2.86e-19 89.7
Msa1050010 AT1G01420.1 27.035 344 207 12 5 315 29 361 3.01e-19 89.4
Msa1050010 AT1G05560.2 23.356 441 259 14 1 375 71 498 3.22e-19 89.7
Msa1050010 AT1G05560.1 23.356 441 259 14 1 375 21 448 3.66e-19 89.4
Msa1050010 AT2G31790.1 22.500 440 268 13 1 376 24 454 4.03e-19 89.0
Msa1050010 AT5G05870.1 23.297 455 242 20 1 375 24 451 1.00e-18 87.8
Msa1050010 AT5G05860.1 27.139 339 205 15 1 315 25 345 4.33e-18 85.9
Msa1050010 AT3G16520.3 22.520 373 215 11 70 378 98 460 8.92e-18 85.1
Msa1050010 AT2G43820.1 23.182 440 254 14 2 376 24 444 9.12e-18 85.1
Msa1050010 AT5G05890.1 26.822 343 207 12 1 315 24 350 1.22e-17 84.7
Msa1050010 AT1G01390.2 25.852 352 210 14 1 315 41 378 1.44e-17 84.7
Msa1050010 AT1G01390.1 25.852 352 210 14 1 315 24 361 1.66e-17 84.3
Msa1050010 AT2G29750.1 25.868 317 198 9 27 316 61 367 1.83e-17 84.3
Msa1050010 AT5G49690.1 26.176 340 210 13 1 315 26 349 2.93e-17 83.6
Msa1050010 AT2G15480.1 24.876 402 216 13 48 379 96 481 3.00e-17 83.6
Msa1050010 AT2G15490.1 24.790 476 244 18 1 379 23 481 3.67e-17 83.2
Msa1050010 AT5G66690.1 25.212 353 202 13 5 315 28 360 4.46e-17 83.2
Msa1050010 AT3G21790.1 24.818 274 179 7 67 316 96 366 4.94e-17 82.8
Msa1050010 AT2G15490.3 24.576 472 247 17 1 379 23 478 5.02e-17 82.8
Msa1050010 AT4G01070.1 25.424 354 209 13 1 315 24 361 7.77e-17 82.4
Msa1050010 AT5G26310.1 22.976 457 242 16 5 373 28 462 3.21e-16 80.5
Msa1050010 AT3G21750.1 21.807 321 208 10 26 316 50 357 3.81e-16 80.1
Msa1050010 AT3G16520.2 22.414 348 197 10 70 354 98 435 5.57e-16 79.7
Msa1050010 AT3G16520.1 21.930 342 206 8 70 354 98 435 6.04e-16 79.3
Msa1050010 AT2G30150.1 25.753 299 186 9 34 315 47 326 6.85e-16 79.3
Msa1050010 AT2G30150.2 25.753 299 186 9 34 315 63 342 7.86e-16 79.0
Msa1050010 AT3G21760.1 24.430 307 209 6 32 316 64 369 8.23e-16 79.3
Msa1050010 AT3G50740.1 27.946 297 159 11 56 315 87 365 8.90e-16 79.0
Msa1050010 AT1G05530.1 26.587 252 121 7 187 375 201 451 1.45e-15 78.2
Msa1050010 AT3G21800.1 21.316 380 221 10 71 375 96 472 1.65e-15 78.2
Msa1050010 AT4G15260.1 23.868 243 154 7 98 316 7 242 2.13e-15 77.0
Msa1050010 AT3G21780.1 32.215 149 82 4 187 316 209 357 2.19e-15 77.8
Msa1050010 AT2G36800.1 26.331 357 201 16 4 315 31 370 2.31e-15 77.8
Msa1050010 AT2G15480.2 26.460 291 177 9 48 316 96 371 2.62e-15 77.8
Msa1050010 AT4G15280.2 23.358 274 175 8 71 316 128 394 6.96e-15 76.3
Msa1050010 AT4G15280.1 23.358 274 175 8 71 316 96 362 8.00e-15 76.3
Msa1050010 AT2G36970.1 23.009 339 227 9 7 315 32 366 1.01e-14 75.9
Msa1050010 AT4G14090.1 25.000 220 117 6 204 375 233 452 1.28e-14 75.5
Msa1050010 AT4G34135.1 26.354 277 172 10 61 316 105 370 5.28e-14 73.6
Msa1050010 AT1G07250.1 26.724 232 154 6 99 316 136 365 8.00e-14 73.2
Msa1050010 AT2G29740.1 24.534 322 196 9 27 316 61 367 9.56e-14 72.8
Msa1050010 AT4G34131.1 25.606 289 179 9 49 316 97 370 1.47e-13 72.4
Msa1050010 AT4G01070.2 26.214 309 188 12 1 286 24 315 3.74e-13 70.5
Msa1050010 AT4G34138.1 22.520 373 203 13 74 375 118 475 6.26e-13 70.5
Msa1050010 AT2G28080.1 24.269 342 214 16 7 315 40 369 6.64e-13 70.1
Msa1050010 AT2G30140.1 25.589 297 188 9 34 315 63 341 7.03e-13 70.1
Msa1050010 AT2G36770.1 22.905 358 217 14 1 315 30 371 8.17e-13 70.1
Msa1050010 AT5G54010.1 23.724 333 223 10 1 316 22 340 9.51e-13 69.7
Msa1050010 AT3G53160.1 24.887 221 104 7 215 375 261 479 1.40e-12 69.3
Msa1050010 AT2G18560.1 35.246 122 62 4 207 315 150 267 1.42e-12 68.9
Msa1050010 AT3G53150.1 27.607 163 95 4 174 315 222 382 1.70e-12 68.9
Msa1050010 AT2G18570.1 32.031 128 70 3 201 315 234 357 1.73e-12 68.9
Msa1050010 AT5G12890.1 23.824 340 208 12 14 315 46 372 2.09e-12 68.9
Msa1050010 AT1G07240.1 26.455 189 126 5 141 316 176 364 2.79e-12 68.2
Msa1050010 AT2G30140.2 25.753 299 184 10 34 315 63 340 4.78e-12 67.4
Msa1050010 AT2G36750.1 24.928 349 216 15 3 315 28 366 4.79e-12 67.8
Msa1050010 AT5G65550.1 22.767 347 223 12 1 316 25 357 5.77e-12 67.4
Msa1050010 AT1G07260.1 22.713 317 212 8 26 316 55 364 8.13e-12 67.0
Msa1050010 AT4G36770.1 35.938 128 59 4 207 316 237 359 8.86e-12 66.6
Msa1050010 AT2G29710.1 30.769 143 83 5 187 316 215 354 1.04e-11 66.6
Msa1050010 AT1G50580.1 24.771 218 117 6 204 375 219 435 1.09e-11 66.6
Msa1050010 AT2G36780.1 23.677 359 213 13 1 315 30 371 1.20e-11 66.6
Msa1050010 AT4G27560.1 34.783 92 55 3 229 315 248 339 2.05e-11 65.5
Msa1050010 AT4G27570.1 34.783 92 55 3 229 315 248 339 2.21e-11 65.5
Msa1050010 AT2G36760.1 29.530 149 83 5 187 315 225 371 6.54e-11 64.3
Msa1050010 AT5G17040.2 28.696 115 79 2 204 316 122 235 6.60e-11 63.5
Msa1050010 AT5G17050.1 22.619 252 149 6 169 375 203 453 8.17e-11 63.9

Find 90 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATGCAAACTTTAAATTT+TGG 0.146513 7_2:-13845383 Msa1050010:CDS
TATTATTGTTACATTTAATA+TGG 0.157168 7_2:-13846556 Msa1050010:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7_2:+13845147 None:intergenic
TTACTTCCATGGAAATCATT+AGG 0.251367 7_2:+13845050 None:intergenic
TCGCCCAACTAATAAACTTT+TGG 0.254931 7_2:+13844674 None:intergenic
TTCTTGACAAGCCATTTCTT+TGG 0.268711 7_2:-13845115 Msa1050010:CDS
ACAACAACAAAAGTTCATTT+TGG 0.269702 7_2:-13845265 Msa1050010:CDS
ATATGTTTCCTTTGGTAGTA+TGG 0.280834 7_2:-13845186 Msa1050010:CDS
ATATCACTTCTATCATCTTC+AGG 0.282907 7_2:+13846678 None:intergenic
TCTTGACAAGCCATTTCTTT+GGG 0.301629 7_2:-13845114 Msa1050010:CDS
GTGTCCATCATAGGTATATC+AGG 0.307459 7_2:+13845461 None:intergenic
TACTTCCATGGAAATCATTA+GGG 0.333367 7_2:+13845051 None:intergenic
AGTGACTTTGCAACCATGTT+TGG 0.348198 7_2:+13846794 None:intergenic
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7_2:+13845153 None:intergenic
TCTTCAGGTTCCAACTCATC+TGG 0.364609 7_2:+13846693 None:intergenic
TTAACTTCTTCTATAAGCTT+TGG 0.364725 7_2:+13846609 None:intergenic
AAGATACAACTTGCTTAGAT+TGG 0.366197 7_2:-13845238 Msa1050010:CDS
ATCCCATCTTCAATAAGTTT+AGG 0.371481 7_2:+13846441 None:intergenic
ATTTAATATGGGTTGGGCCT+TGG 0.371850 7_2:-13846544 Msa1050010:CDS
AAGTTTGTTGTGTCCATCAT+AGG 0.375882 7_2:+13845452 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.377369 7_2:-13845294 Msa1050010:CDS
TCTCCAAAAGTTTATTAGTT+GGG 0.379670 7_2:-13844677 Msa1050010:CDS
TGTTACATTTAATATGGGTT+GGG 0.391046 7_2:-13846550 Msa1050010:CDS
TTGTTGTTACTTTCCATCAA+TGG 0.392206 7_2:+13845281 None:intergenic
ATAAGCTTTGGAAGTCTAGT+AGG 0.397645 7_2:+13846621 None:intergenic
AACTATAAACGATCGAAAAC+CGG 0.398350 7_2:-13846753 Msa1050010:CDS
TCGTCCTAGTAATGACAATA+AGG 0.399447 7_2:-13845087 Msa1050010:CDS
GTAAAGGTAAAATTGTTAGT+TGG 0.403350 7_2:-13845031 Msa1050010:CDS
ATCTCCAAAAGTTTATTAGT+TGG 0.404458 7_2:-13844678 Msa1050010:CDS
CTTGGAAGTGGGCAACAACT+TGG 0.406559 7_2:-13846526 Msa1050010:CDS
TAAAGGTAAAATTGTTAGTT+GGG 0.409569 7_2:-13845030 Msa1050010:CDS
ATTATTGTTACATTTAATAT+GGG 0.411868 7_2:-13846555 Msa1050010:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.416978 7_2:-13846481 Msa1050010:CDS
CTTTGGTAGTATGGTAGTAA+TGG 0.420468 7_2:-13845177 Msa1050010:CDS
TATGGGTTGGGCCTTGGAAG+TGG 0.420744 7_2:-13846538 Msa1050010:CDS
TTTGTCATATATGTTTCCTT+TGG 0.426065 7_2:-13845194 Msa1050010:CDS
CAAGTTGTTGCCCACTTCCA+AGG 0.426651 7_2:+13846527 None:intergenic
TTGTTACATTTAATATGGGT+TGG 0.444713 7_2:-13846551 Msa1050010:CDS
AGTTGGTGATAATGACATAA+AGG 0.445350 7_2:-13844767 Msa1050010:CDS
CTTTCCATCAATGGACCAAT+TGG 0.450743 7_2:+13845290 None:intergenic
GAATTAGAGAAAGATGATAA+TGG 0.451028 7_2:-13844832 Msa1050010:CDS
CTCCCCTGATATACCTATGA+TGG 0.458771 7_2:-13845465 Msa1050010:CDS
GGACCAATTGGTAGGAACTT+TGG 0.458930 7_2:+13845302 None:intergenic
GGACGAACAACCCAAAGAAA+TGG 0.465539 7_2:+13845104 None:intergenic
ATACCTAAACTTATTGAAGA+TGG 0.468134 7_2:-13846444 Msa1050010:CDS
GGCAACAACTTGGGAATCAA+AGG 0.471334 7_2:-13846516 Msa1050010:CDS
GCCAAAGTAGTGGCAGAAGC+TGG 0.476655 7_2:+13846480 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7_2:-13845047 Msa1050010:CDS
TCACCAAAGTTCCTACCAAT+TGG 0.485412 7_2:-13845305 Msa1050010:CDS
TGTCAAGAAGATCAAGTCCT+AGG 0.486727 7_2:+13845129 None:intergenic
CACTTGTATCTTGTCTTGCT+CGG 0.488719 7_2:+13846725 None:intergenic
TTTACCTTATTGTCATTACT+AGG 0.497913 7_2:+13845083 None:intergenic
TACCTAAACTTATTGAAGAT+GGG 0.498856 7_2:-13846443 Msa1050010:CDS
AAGAAGGTGGATCAAGTAGT+TGG 0.501502 7_2:-13844784 Msa1050010:CDS
ATGATAATGGATATATATCA+AGG 0.502276 7_2:-13844819 Msa1050010:CDS
CTTTGCAACCATGTTTGGCT+AGG 0.507069 7_2:+13846799 None:intergenic
GAAACATATATGACAAATTG+AGG 0.516237 7_2:+13845200 None:intergenic
CTTACGAAGCAAGCAATGGC+TGG 0.518730 7_2:+13844981 None:intergenic
GCATACCCTAATGATTTCCA+TGG 0.524493 7_2:-13845056 Msa1050010:CDS
ACTACTAATAATATAGAAGA+AGG 0.531304 7_2:-13844718 Msa1050010:CDS
ATGGGTTGGGCCTTGGAAGT+GGG 0.539774 7_2:-13846537 Msa1050010:CDS
CGAAGCAAGCAATGGCTGGA+TGG 0.540208 7_2:+13844985 None:intergenic
GATGGGATTATTGATTCTGA+AGG 0.541173 7_2:-13846426 Msa1050010:intron
CTTGTCTTGCTCGGAAACAC+CGG 0.544929 7_2:+13846734 None:intergenic
TTGGAAGTGGGCAACAACTT+GGG 0.545545 7_2:-13846525 Msa1050010:CDS
TGGTAGGAACTTTGGTGACA+TGG 0.547060 7_2:+13845310 None:intergenic
ATATATCAAGGCAAGAGATA+AGG 0.554655 7_2:-13844807 Msa1050010:CDS
CTTCAGGTTCCAACTCATCT+GGG 0.556823 7_2:+13846694 None:intergenic
ACAACAAACTTTCCATGGCA+TGG 0.559550 7_2:-13845440 Msa1050010:CDS
TTTGGAGATTATGTGATGAC+TGG 0.561048 7_2:+13844692 None:intergenic
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7_2:-13845341 Msa1050010:CDS
GGTGACACTCCCAGATGAGT+TGG 0.565054 7_2:-13846703 Msa1050010:CDS
AAGGCAAGAGATAAGGAAGA+AGG 0.565891 7_2:-13844800 Msa1050010:CDS
GCAACAACTTGGGAATCAAA+GGG 0.566986 7_2:-13846515 Msa1050010:CDS
TGTCCATCATAGGTATATCA+GGG 0.572365 7_2:+13845462 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.574039 7_2:+13845294 None:intergenic
CTTTGGAAGTCTAGTAGGCA+TGG 0.581752 7_2:+13846626 None:intergenic
GTCAAGAAGATCAAGTCCTA+GGG 0.586434 7_2:+13845130 None:intergenic
TGGACACAACAAACTTTCCA+TGG 0.588818 7_2:-13845445 Msa1050010:CDS
CAATTTAATGAACTAGCCCT+AGG 0.592472 7_2:-13845146 Msa1050010:CDS
CATTACTACCATACTACCAA+AGG 0.593449 7_2:+13845178 None:intergenic
GACAGCACATGCCAAAGTAG+TGG 0.615295 7_2:+13846470 None:intergenic
TCACAAATCCTAGCCAAACA+TGG 0.621146 7_2:-13846807 Msa1050010:CDS
GCAAGAGATAAGGAAGAAGG+TGG 0.626801 7_2:-13844797 Msa1050010:CDS
ACTAATAATATAGAAGAAGG+TGG 0.628133 7_2:-13844715 Msa1050010:CDS
CAACAACTTGGGAATCAAAG+GGG 0.628439 7_2:-13846514 Msa1050010:CDS
GGTGACATGGAAAATACACC+AGG 0.649715 7_2:+13845323 None:intergenic
CGAGCAAGACAAGATACAAG+TGG 0.649951 7_2:-13846724 Msa1050010:CDS
ATGACTTACGAAGCAAGCAA+TGG 0.654090 7_2:+13844977 None:intergenic
GTCCATCATAGGTATATCAG+GGG 0.691231 7_2:+13845463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTGTTACATTTAATA+TGG - chr7_2:13844929-13844948 Msa1050010:intron 10.0%
!! ATTATTGTTACATTTAATAT+GGG - chr7_2:13844930-13844949 Msa1050010:intron 10.0%
!!! AATTTCACAATTAAATTTTT+TGG - chr7_2:13845104-13845123 Msa1050010:CDS 10.0%
!!! TAGACTATAATATTTTTTTT+AGG - chr7_2:13845688-13845707 Msa1050010:intron 10.0%
!! TATTATTGTTACATTTAATA+TGG - chr7_2:13844929-13844948 Msa1050010:intron 10.0%
!! ATTATTGTTACATTTAATAT+GGG - chr7_2:13844930-13844949 Msa1050010:intron 10.0%
!!! AATTTCACAATTAAATTTTT+TGG - chr7_2:13845104-13845123 Msa1050010:CDS 10.0%
!!! TAGACTATAATATTTTTTTT+AGG - chr7_2:13845688-13845707 Msa1050010:intron 10.0%
!!! CAACTTTTCTTATTTATTTA+TGG - chr7_2:13845186-13845205 Msa1050010:CDS 15.0%
!! ATTAAGTGATTATACAATTT+GGG - chr7_2:13845538-13845557 Msa1050010:intron 15.0%
!! ATATTGAAGAAAGAAAAAAA+AGG - chr7_2:13845627-13845646 Msa1050010:intron 15.0%
!!! CAACTTTTCTTATTTATTTA+TGG - chr7_2:13845186-13845205 Msa1050010:CDS 15.0%
!! ATTAAGTGATTATACAATTT+GGG - chr7_2:13845538-13845557 Msa1050010:intron 15.0%
!! ATATTGAAGAAAGAAAAAAA+AGG - chr7_2:13845627-13845646 Msa1050010:intron 15.0%
!! GATTAAGTGATTATACAATT+TGG - chr7_2:13845537-13845556 Msa1050010:intron 20.0%
!! TTAAGTGATTATACAATTTG+GGG - chr7_2:13845539-13845558 Msa1050010:intron 20.0%
!! CATCAAATTTATATTCAGAA+AGG - chr7_2:13845574-13845593 Msa1050010:intron 20.0%
!! AAACTACATCTACTATTTAA+TGG - chr7_2:13845810-13845829 Msa1050010:intron 20.0%
!!! AATATTTCATGATTTCGTTT+TGG - chr7_2:13845958-13845977 Msa1050010:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG + chr7_2:13846001-13846020 None:intergenic 20.0%
!!! AAACTTTAAATTTTGGAGAA+TGG - chr7_2:13846109-13846128 Msa1050010:intron 20.0%
!! TAAAGGTAAAATTGTTAGTT+GGG - chr7_2:13846455-13846474 Msa1050010:CDS 20.0%
!! AGAAATTGATCAATTGAAAA+TGG + chr7_2:13846591-13846610 None:intergenic 20.0%
!!! ATGATAATGGATATATATCA+AGG - chr7_2:13846666-13846685 Msa1050010:CDS 20.0%
!! ACTACTAATAATATAGAAGA+AGG - chr7_2:13846767-13846786 Msa1050010:CDS 20.0%
!! GATTAAGTGATTATACAATT+TGG - chr7_2:13845537-13845556 Msa1050010:intron 20.0%
!! TTAAGTGATTATACAATTTG+GGG - chr7_2:13845539-13845558 Msa1050010:intron 20.0%
!! CATCAAATTTATATTCAGAA+AGG - chr7_2:13845574-13845593 Msa1050010:intron 20.0%
!! AAACTACATCTACTATTTAA+TGG - chr7_2:13845810-13845829 Msa1050010:intron 20.0%
!!! AATATTTCATGATTTCGTTT+TGG - chr7_2:13845958-13845977 Msa1050010:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG + chr7_2:13846001-13846020 None:intergenic 20.0%
!!! AAACTTTAAATTTTGGAGAA+TGG - chr7_2:13846109-13846128 Msa1050010:intron 20.0%
!! TAAAGGTAAAATTGTTAGTT+GGG - chr7_2:13846455-13846474 Msa1050010:CDS 20.0%
!! AGAAATTGATCAATTGAAAA+TGG + chr7_2:13846591-13846610 None:intergenic 20.0%
!!! ATGATAATGGATATATATCA+AGG - chr7_2:13846666-13846685 Msa1050010:CDS 20.0%
!! ACTACTAATAATATAGAAGA+AGG - chr7_2:13846767-13846786 Msa1050010:CDS 20.0%
! TTAACTTCTTCTATAAGCTT+TGG + chr7_2:13844879-13844898 None:intergenic 25.0%
! TTGTTACATTTAATATGGGT+TGG - chr7_2:13844934-13844953 Msa1050010:intron 25.0%
! TGTTACATTTAATATGGGTT+GGG - chr7_2:13844935-13844954 Msa1050010:intron 25.0%
! ATACCTAAACTTATTGAAGA+TGG - chr7_2:13845041-13845060 Msa1050010:CDS 25.0%
! TACCTAAACTTATTGAAGAT+GGG - chr7_2:13845042-13845061 Msa1050010:CDS 25.0%
! TAAAAAATTAAGCGAAAGAG+AGG - chr7_2:13845386-13845405 Msa1050010:CDS 25.0%
!! TTAGAAAGCTATTTCATTGA+AGG + chr7_2:13845510-13845529 None:intergenic 25.0%
! TAAGTGATTATACAATTTGG+GGG - chr7_2:13845540-13845559 Msa1050010:intron 25.0%
!!! TTCTTTTCTTATTTGAGTGA+GGG - chr7_2:13845658-13845677 Msa1050010:intron 25.0%
! GTTATTACTTGAGTGAATTA+AGG + chr7_2:13845789-13845808 None:intergenic 25.0%
!!! TGAATTTCTTGTTTTTTGGT+TGG + chr7_2:13845997-13846016 None:intergenic 25.0%
!! GAGATGCAAACTTTAAATTT+TGG - chr7_2:13846102-13846121 Msa1050010:intron 25.0%
!! ACAACAACAAAAGTTCATTT+TGG - chr7_2:13846220-13846239 Msa1050010:intron 25.0%
! GAAACATATATGACAAATTG+AGG + chr7_2:13846288-13846307 None:intergenic 25.0%
! TTTGTCATATATGTTTCCTT+TGG - chr7_2:13846291-13846310 Msa1050010:intron 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG + chr7_2:13846335-13846354 None:intergenic 25.0%
! TTTACCTTATTGTCATTACT+AGG + chr7_2:13846405-13846424 None:intergenic 25.0%
! GTAAAGGTAAAATTGTTAGT+TGG - chr7_2:13846454-13846473 Msa1050010:CDS 25.0%
!! TGGTTCAATATTTTACTTTG+TGG + chr7_2:13846483-13846502 None:intergenic 25.0%
! AATCATATATTTGTGATGTG+TGG - chr7_2:13846618-13846637 Msa1050010:CDS 25.0%
! GAATTAGAGAAAGATGATAA+TGG - chr7_2:13846653-13846672 Msa1050010:CDS 25.0%
! ACTAATAATATAGAAGAAGG+TGG - chr7_2:13846770-13846789 Msa1050010:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG - chr7_2:13846807-13846826 Msa1050010:CDS 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG - chr7_2:13846808-13846827 Msa1050010:CDS 25.0%
! TTAACTTCTTCTATAAGCTT+TGG + chr7_2:13844879-13844898 None:intergenic 25.0%
! TTGTTACATTTAATATGGGT+TGG - chr7_2:13844934-13844953 Msa1050010:intron 25.0%
! TGTTACATTTAATATGGGTT+GGG - chr7_2:13844935-13844954 Msa1050010:intron 25.0%
! ATACCTAAACTTATTGAAGA+TGG - chr7_2:13845041-13845060 Msa1050010:CDS 25.0%
! TACCTAAACTTATTGAAGAT+GGG - chr7_2:13845042-13845061 Msa1050010:CDS 25.0%
! TAAAAAATTAAGCGAAAGAG+AGG - chr7_2:13845386-13845405 Msa1050010:CDS 25.0%
!! TTAGAAAGCTATTTCATTGA+AGG + chr7_2:13845510-13845529 None:intergenic 25.0%
! TAAGTGATTATACAATTTGG+GGG - chr7_2:13845540-13845559 Msa1050010:intron 25.0%
!!! TTCTTTTCTTATTTGAGTGA+GGG - chr7_2:13845658-13845677 Msa1050010:intron 25.0%
! GTTATTACTTGAGTGAATTA+AGG + chr7_2:13845789-13845808 None:intergenic 25.0%
!!! TGAATTTCTTGTTTTTTGGT+TGG + chr7_2:13845997-13846016 None:intergenic 25.0%
!! GAGATGCAAACTTTAAATTT+TGG - chr7_2:13846102-13846121 Msa1050010:intron 25.0%
!! ACAACAACAAAAGTTCATTT+TGG - chr7_2:13846220-13846239 Msa1050010:intron 25.0%
! GAAACATATATGACAAATTG+AGG + chr7_2:13846288-13846307 None:intergenic 25.0%
! TTTGTCATATATGTTTCCTT+TGG - chr7_2:13846291-13846310 Msa1050010:intron 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG + chr7_2:13846335-13846354 None:intergenic 25.0%
! TTTACCTTATTGTCATTACT+AGG + chr7_2:13846405-13846424 None:intergenic 25.0%
! GTAAAGGTAAAATTGTTAGT+TGG - chr7_2:13846454-13846473 Msa1050010:CDS 25.0%
!! TGGTTCAATATTTTACTTTG+TGG + chr7_2:13846483-13846502 None:intergenic 25.0%
! AATCATATATTTGTGATGTG+TGG - chr7_2:13846618-13846637 Msa1050010:CDS 25.0%
! GAATTAGAGAAAGATGATAA+TGG - chr7_2:13846653-13846672 Msa1050010:CDS 25.0%
! ACTAATAATATAGAAGAAGG+TGG - chr7_2:13846770-13846789 Msa1050010:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG - chr7_2:13846807-13846826 Msa1050010:CDS 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG - chr7_2:13846808-13846827 Msa1050010:CDS 25.0%
AACTATAAACGATCGAAAAC+CGG - chr7_2:13844732-13844751 Msa1050010:CDS 30.0%
ATATCACTTCTATCATCTTC+AGG + chr7_2:13844810-13844829 None:intergenic 30.0%
ATCCCATCTTCAATAAGTTT+AGG + chr7_2:13845047-13845066 None:intergenic 30.0%
GGAATAGAATTACATAAAGC+TGG - chr7_2:13845125-13845144 Msa1050010:CDS 30.0%
GAGAGGTAAAATTTACGAAA+CGG - chr7_2:13845403-13845422 Msa1050010:CDS 30.0%
TCTTTCTTCAATATGCGTTT+GGG + chr7_2:13845621-13845640 None:intergenic 30.0%
TTCTTTCTTCAATATGCGTT+TGG + chr7_2:13845622-13845641 None:intergenic 30.0%
!! GTTCTTTTCTTATTTGAGTG+AGG - chr7_2:13845657-13845676 Msa1050010:intron 30.0%
! TACTATTTAATGGACACACT+TGG - chr7_2:13845820-13845839 Msa1050010:intron 30.0%
! TCTTTTGTTACTAGTTGTTG+AGG - chr7_2:13845899-13845918 Msa1050010:intron 30.0%
!! CTTTAAATTTTGGAGAATGG+TGG - chr7_2:13846112-13846131 Msa1050010:intron 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG + chr7_2:13846207-13846226 None:intergenic 30.0%
! AAGATACAACTTGCTTAGAT+TGG - chr7_2:13846247-13846266 Msa1050010:intron 30.0%
! ATATGTTTCCTTTGGTAGTA+TGG - chr7_2:13846299-13846318 Msa1050010:intron 30.0%
TACTTCCATGGAAATCATTA+GGG + chr7_2:13846437-13846456 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+AGG + chr7_2:13846438-13846457 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG - chr7_2:13846438-13846457 Msa1050010:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG + chr7_2:13846449-13846468 None:intergenic 30.0%
ATATATCAAGGCAAGAGATA+AGG - chr7_2:13846678-13846697 Msa1050010:CDS 30.0%
!! AGTTGGTGATAATGACATAA+AGG - chr7_2:13846718-13846737 Msa1050010:CDS 30.0%
AACTATAAACGATCGAAAAC+CGG - chr7_2:13844732-13844751 Msa1050010:CDS 30.0%
ATATCACTTCTATCATCTTC+AGG + chr7_2:13844810-13844829 None:intergenic 30.0%
ATCCCATCTTCAATAAGTTT+AGG + chr7_2:13845047-13845066 None:intergenic 30.0%
GGAATAGAATTACATAAAGC+TGG - chr7_2:13845125-13845144 Msa1050010:CDS 30.0%
GAGAGGTAAAATTTACGAAA+CGG - chr7_2:13845403-13845422 Msa1050010:CDS 30.0%
TCTTTCTTCAATATGCGTTT+GGG + chr7_2:13845621-13845640 None:intergenic 30.0%
TTCTTTCTTCAATATGCGTT+TGG + chr7_2:13845622-13845641 None:intergenic 30.0%
!! GTTCTTTTCTTATTTGAGTG+AGG - chr7_2:13845657-13845676 Msa1050010:intron 30.0%
! TACTATTTAATGGACACACT+TGG - chr7_2:13845820-13845839 Msa1050010:intron 30.0%
! TCTTTTGTTACTAGTTGTTG+AGG - chr7_2:13845899-13845918 Msa1050010:intron 30.0%
!! CTTTAAATTTTGGAGAATGG+TGG - chr7_2:13846112-13846131 Msa1050010:intron 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG + chr7_2:13846207-13846226 None:intergenic 30.0%
! AAGATACAACTTGCTTAGAT+TGG - chr7_2:13846247-13846266 Msa1050010:intron 30.0%
! ATATGTTTCCTTTGGTAGTA+TGG - chr7_2:13846299-13846318 Msa1050010:intron 30.0%
TACTTCCATGGAAATCATTA+GGG + chr7_2:13846437-13846456 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+AGG + chr7_2:13846438-13846457 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG - chr7_2:13846438-13846457 Msa1050010:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG + chr7_2:13846449-13846468 None:intergenic 30.0%
ATATATCAAGGCAAGAGATA+AGG - chr7_2:13846678-13846697 Msa1050010:CDS 30.0%
!! AGTTGGTGATAATGACATAA+AGG - chr7_2:13846718-13846737 Msa1050010:CDS 30.0%
!! ATAAGCTTTGGAAGTCTAGT+AGG + chr7_2:13844867-13844886 None:intergenic 35.0%
!! GATGGGATTATTGATTCTGA+AGG - chr7_2:13845059-13845078 Msa1050010:CDS 35.0%
GTGGGAAATAGGAAAACAAA+TGG - chr7_2:13845454-13845473 Msa1050010:CDS 35.0%
!! TTTTCTTATTTGAGTGAGGG+TGG - chr7_2:13845661-13845680 Msa1050010:intron 35.0%
! TTTCTTATTTGAGTGAGGGT+GGG - chr7_2:13845662-13845681 Msa1050010:intron 35.0%
! TTTTTGTACTCCTCCAAAGT+CGG - chr7_2:13845744-13845763 Msa1050010:intron 35.0%
TGTCCATCATAGGTATATCA+GGG + chr7_2:13846026-13846045 None:intergenic 35.0%
!! AAGTTTGTTGTGTCCATCAT+AGG + chr7_2:13846036-13846055 None:intergenic 35.0%
CATTACTACCATACTACCAA+AGG + chr7_2:13846310-13846329 None:intergenic 35.0%
! CTTTGGTAGTATGGTAGTAA+TGG - chr7_2:13846308-13846327 Msa1050010:intron 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG + chr7_2:13846341-13846360 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG - chr7_2:13846339-13846358 Msa1050010:intron 35.0%
TTCTTGACAAGCCATTTCTT+TGG - chr7_2:13846370-13846389 Msa1050010:intron 35.0%
TCTTGACAAGCCATTTCTTT+GGG - chr7_2:13846371-13846390 Msa1050010:intron 35.0%
TCGTCCTAGTAATGACAATA+AGG - chr7_2:13846398-13846417 Msa1050010:intron 35.0%
TTTGGAGATTATGTGATGAC+TGG + chr7_2:13846796-13846815 None:intergenic 35.0%
! TCGCCCAACTAATAAACTTT+TGG + chr7_2:13846814-13846833 None:intergenic 35.0%
!! ATAAGCTTTGGAAGTCTAGT+AGG + chr7_2:13844867-13844886 None:intergenic 35.0%
!! GATGGGATTATTGATTCTGA+AGG - chr7_2:13845059-13845078 Msa1050010:CDS 35.0%
GTGGGAAATAGGAAAACAAA+TGG - chr7_2:13845454-13845473 Msa1050010:CDS 35.0%
!! TTTTCTTATTTGAGTGAGGG+TGG - chr7_2:13845661-13845680 Msa1050010:intron 35.0%
! TTTCTTATTTGAGTGAGGGT+GGG - chr7_2:13845662-13845681 Msa1050010:intron 35.0%
! TTTTTGTACTCCTCCAAAGT+CGG - chr7_2:13845744-13845763 Msa1050010:intron 35.0%
TGTCCATCATAGGTATATCA+GGG + chr7_2:13846026-13846045 None:intergenic 35.0%
!! AAGTTTGTTGTGTCCATCAT+AGG + chr7_2:13846036-13846055 None:intergenic 35.0%
CATTACTACCATACTACCAA+AGG + chr7_2:13846310-13846329 None:intergenic 35.0%
! CTTTGGTAGTATGGTAGTAA+TGG - chr7_2:13846308-13846327 Msa1050010:intron 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG + chr7_2:13846341-13846360 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG - chr7_2:13846339-13846358 Msa1050010:intron 35.0%
TTCTTGACAAGCCATTTCTT+TGG - chr7_2:13846370-13846389 Msa1050010:intron 35.0%
TCTTGACAAGCCATTTCTTT+GGG - chr7_2:13846371-13846390 Msa1050010:intron 35.0%
TCGTCCTAGTAATGACAATA+AGG - chr7_2:13846398-13846417 Msa1050010:intron 35.0%
TTTGGAGATTATGTGATGAC+TGG + chr7_2:13846796-13846815 None:intergenic 35.0%
! TCGCCCAACTAATAAACTTT+TGG + chr7_2:13846814-13846833 None:intergenic 35.0%
TCACAAATCCTAGCCAAACA+TGG - chr7_2:13844678-13844697 Msa1050010:CDS 40.0%
AGTGACTTTGCAACCATGTT+TGG + chr7_2:13844694-13844713 None:intergenic 40.0%
CACTTGTATCTTGTCTTGCT+CGG + chr7_2:13844763-13844782 None:intergenic 40.0%
!! ATTTAATATGGGTTGGGCCT+TGG - chr7_2:13844941-13844960 Msa1050010:intron 40.0%
GCAACAACTTGGGAATCAAA+GGG - chr7_2:13844970-13844989 Msa1050010:intron 40.0%
CAACAACTTGGGAATCAAAG+GGG - chr7_2:13844971-13844990 Msa1050010:intron 40.0%
TTTCCTATTTCCCACAACAG+AGG + chr7_2:13845449-13845468 None:intergenic 40.0%
GTGATTATACAATTTGGGGG+TGG - chr7_2:13845543-13845562 Msa1050010:intron 40.0%
!!! TTTTTTAGGCCCAGAGCTTT+TGG - chr7_2:13845702-13845721 Msa1050010:intron 40.0%
ACAAAAAGCTCAACCATGCT+GGG + chr7_2:13845731-13845750 None:intergenic 40.0%
TACAAAAAGCTCAACCATGC+TGG + chr7_2:13845732-13845751 None:intergenic 40.0%
! TTTTGTACTCCTCCAAAGTC+GGG - chr7_2:13845745-13845764 Msa1050010:intron 40.0%
GGCAACATAATTTCGAGCTT+AGG - chr7_2:13845920-13845939 Msa1050010:intron 40.0%
!!! TGATTTCGTTTTGGCTTTGC+AGG - chr7_2:13845967-13845986 Msa1050010:intron 40.0%
GTCCATCATAGGTATATCAG+GGG + chr7_2:13846025-13846044 None:intergenic 40.0%
GTGTCCATCATAGGTATATC+AGG + chr7_2:13846027-13846046 None:intergenic 40.0%
TGGACACAACAAACTTTCCA+TGG - chr7_2:13846040-13846059 Msa1050010:intron 40.0%
ACAACAAACTTTCCATGGCA+TGG - chr7_2:13846045-13846064 Msa1050010:intron 40.0%
! ATTTTATCTACGCCATGCCA+TGG + chr7_2:13846060-13846079 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG - chr7_2:13846180-13846199 Msa1050010:intron 40.0%
CTTTCCATCAATGGACCAAT+TGG + chr7_2:13846198-13846217 None:intergenic 40.0%
GTCAAGAAGATCAAGTCCTA+GGG + chr7_2:13846358-13846377 None:intergenic 40.0%
TGTCAAGAAGATCAAGTCCT+AGG + chr7_2:13846359-13846378 None:intergenic 40.0%
GCATACCCTAATGATTTCCA+TGG - chr7_2:13846429-13846448 Msa1050010:CDS 40.0%
ATGACTTACGAAGCAAGCAA+TGG + chr7_2:13846511-13846530 None:intergenic 40.0%
GGATGGAATTCTACCATAGA+AGG - chr7_2:13846534-13846553 Msa1050010:CDS 40.0%
GAAAATGGCCAACACAAGAA+AGG + chr7_2:13846576-13846595 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG - chr7_2:13846626-13846645 Msa1050010:CDS 40.0%
AAGGCAAGAGATAAGGAAGA+AGG - chr7_2:13846685-13846704 Msa1050010:CDS 40.0%
AAGAAGGTGGATCAAGTAGT+TGG - chr7_2:13846701-13846720 Msa1050010:CDS 40.0%
TCACAAATCCTAGCCAAACA+TGG - chr7_2:13844678-13844697 Msa1050010:CDS 40.0%
AGTGACTTTGCAACCATGTT+TGG + chr7_2:13844694-13844713 None:intergenic 40.0%
CACTTGTATCTTGTCTTGCT+CGG + chr7_2:13844763-13844782 None:intergenic 40.0%
!! ATTTAATATGGGTTGGGCCT+TGG - chr7_2:13844941-13844960 Msa1050010:intron 40.0%
GCAACAACTTGGGAATCAAA+GGG - chr7_2:13844970-13844989 Msa1050010:intron 40.0%
CAACAACTTGGGAATCAAAG+GGG - chr7_2:13844971-13844990 Msa1050010:intron 40.0%
TTTCCTATTTCCCACAACAG+AGG + chr7_2:13845449-13845468 None:intergenic 40.0%
GTGATTATACAATTTGGGGG+TGG - chr7_2:13845543-13845562 Msa1050010:intron 40.0%
!!! TTTTTTAGGCCCAGAGCTTT+TGG - chr7_2:13845702-13845721 Msa1050010:intron 40.0%
ACAAAAAGCTCAACCATGCT+GGG + chr7_2:13845731-13845750 None:intergenic 40.0%
TACAAAAAGCTCAACCATGC+TGG + chr7_2:13845732-13845751 None:intergenic 40.0%
! TTTTGTACTCCTCCAAAGTC+GGG - chr7_2:13845745-13845764 Msa1050010:intron 40.0%
GGCAACATAATTTCGAGCTT+AGG - chr7_2:13845920-13845939 Msa1050010:intron 40.0%
!!! TGATTTCGTTTTGGCTTTGC+AGG - chr7_2:13845967-13845986 Msa1050010:intron 40.0%
GTCCATCATAGGTATATCAG+GGG + chr7_2:13846025-13846044 None:intergenic 40.0%
GTGTCCATCATAGGTATATC+AGG + chr7_2:13846027-13846046 None:intergenic 40.0%
TGGACACAACAAACTTTCCA+TGG - chr7_2:13846040-13846059 Msa1050010:intron 40.0%
ACAACAAACTTTCCATGGCA+TGG - chr7_2:13846045-13846064 Msa1050010:intron 40.0%
! ATTTTATCTACGCCATGCCA+TGG + chr7_2:13846060-13846079 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG - chr7_2:13846180-13846199 Msa1050010:intron 40.0%
CTTTCCATCAATGGACCAAT+TGG + chr7_2:13846198-13846217 None:intergenic 40.0%
GTCAAGAAGATCAAGTCCTA+GGG + chr7_2:13846358-13846377 None:intergenic 40.0%
TGTCAAGAAGATCAAGTCCT+AGG + chr7_2:13846359-13846378 None:intergenic 40.0%
GCATACCCTAATGATTTCCA+TGG - chr7_2:13846429-13846448 Msa1050010:CDS 40.0%
ATGACTTACGAAGCAAGCAA+TGG + chr7_2:13846511-13846530 None:intergenic 40.0%
GGATGGAATTCTACCATAGA+AGG - chr7_2:13846534-13846553 Msa1050010:CDS 40.0%
GAAAATGGCCAACACAAGAA+AGG + chr7_2:13846576-13846595 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG - chr7_2:13846626-13846645 Msa1050010:CDS 40.0%
AAGGCAAGAGATAAGGAAGA+AGG - chr7_2:13846685-13846704 Msa1050010:CDS 40.0%
AAGAAGGTGGATCAAGTAGT+TGG - chr7_2:13846701-13846720 Msa1050010:CDS 40.0%
CTTTGCAACCATGTTTGGCT+AGG + chr7_2:13844689-13844708 None:intergenic 45.0%
CGAGCAAGACAAGATACAAG+TGG - chr7_2:13844761-13844780 Msa1050010:CDS 45.0%
! CTTCAGGTTCCAACTCATCT+GGG + chr7_2:13844794-13844813 None:intergenic 45.0%
! TCTTCAGGTTCCAACTCATC+TGG + chr7_2:13844795-13844814 None:intergenic 45.0%
! CTTTGGAAGTCTAGTAGGCA+TGG + chr7_2:13844862-13844881 None:intergenic 45.0%
TTGGAAGTGGGCAACAACTT+GGG - chr7_2:13844960-13844979 Msa1050010:intron 45.0%
GGCAACAACTTGGGAATCAA+AGG - chr7_2:13844969-13844988 Msa1050010:intron 45.0%
AATTTGTCGCTCCTCTGTTG+TGG - chr7_2:13845435-13845454 Msa1050010:CDS 45.0%
ATTTGTCGCTCCTCTGTTGT+GGG - chr7_2:13845436-13845455 Msa1050010:CDS 45.0%
CTCCCCTGATATACCTATGA+TGG - chr7_2:13846020-13846039 Msa1050010:intron 45.0%
ACTGCTTATGATCTTGAGCC+TGG - chr7_2:13846144-13846163 Msa1050010:intron 45.0%
GGTGACATGGAAAATACACC+AGG + chr7_2:13846165-13846184 None:intergenic 45.0%
! TGGTAGGAACTTTGGTGACA+TGG + chr7_2:13846178-13846197 None:intergenic 45.0%
GGACCAATTGGTAGGAACTT+TGG + chr7_2:13846186-13846205 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG + chr7_2:13846194-13846213 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG - chr7_2:13846191-13846210 Msa1050010:intron 45.0%
GGACGAACAACCCAAAGAAA+TGG + chr7_2:13846384-13846403 None:intergenic 45.0%
GCTTGCTTCGTAAGTCATTG+TGG - chr7_2:13846513-13846532 Msa1050010:CDS 45.0%
GCTTCGTAAGTCATTGTGGA+TGG - chr7_2:13846517-13846536 Msa1050010:CDS 45.0%
! ACCATAGAAGGTGTACATGC+TGG - chr7_2:13846546-13846565 Msa1050010:CDS 45.0%
ACCAGCATGTACACCTTCTA+TGG + chr7_2:13846550-13846569 None:intergenic 45.0%
CTGGTGTACCTTTCTTGTGT+TGG - chr7_2:13846565-13846584 Msa1050010:CDS 45.0%
GCAAGAGATAAGGAAGAAGG+TGG - chr7_2:13846688-13846707 Msa1050010:CDS 45.0%
CTTTGCAACCATGTTTGGCT+AGG + chr7_2:13844689-13844708 None:intergenic 45.0%
CGAGCAAGACAAGATACAAG+TGG - chr7_2:13844761-13844780 Msa1050010:CDS 45.0%
! CTTCAGGTTCCAACTCATCT+GGG + chr7_2:13844794-13844813 None:intergenic 45.0%
! TCTTCAGGTTCCAACTCATC+TGG + chr7_2:13844795-13844814 None:intergenic 45.0%
! CTTTGGAAGTCTAGTAGGCA+TGG + chr7_2:13844862-13844881 None:intergenic 45.0%
TTGGAAGTGGGCAACAACTT+GGG - chr7_2:13844960-13844979 Msa1050010:intron 45.0%
GGCAACAACTTGGGAATCAA+AGG - chr7_2:13844969-13844988 Msa1050010:intron 45.0%
AATTTGTCGCTCCTCTGTTG+TGG - chr7_2:13845435-13845454 Msa1050010:CDS 45.0%
ATTTGTCGCTCCTCTGTTGT+GGG - chr7_2:13845436-13845455 Msa1050010:CDS 45.0%
CTCCCCTGATATACCTATGA+TGG - chr7_2:13846020-13846039 Msa1050010:intron 45.0%
ACTGCTTATGATCTTGAGCC+TGG - chr7_2:13846144-13846163 Msa1050010:intron 45.0%
GGTGACATGGAAAATACACC+AGG + chr7_2:13846165-13846184 None:intergenic 45.0%
! TGGTAGGAACTTTGGTGACA+TGG + chr7_2:13846178-13846197 None:intergenic 45.0%
GGACCAATTGGTAGGAACTT+TGG + chr7_2:13846186-13846205 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG + chr7_2:13846194-13846213 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG - chr7_2:13846191-13846210 Msa1050010:intron 45.0%
GGACGAACAACCCAAAGAAA+TGG + chr7_2:13846384-13846403 None:intergenic 45.0%
GCTTGCTTCGTAAGTCATTG+TGG - chr7_2:13846513-13846532 Msa1050010:CDS 45.0%
GCTTCGTAAGTCATTGTGGA+TGG - chr7_2:13846517-13846536 Msa1050010:CDS 45.0%
! ACCATAGAAGGTGTACATGC+TGG - chr7_2:13846546-13846565 Msa1050010:CDS 45.0%
ACCAGCATGTACACCTTCTA+TGG + chr7_2:13846550-13846569 None:intergenic 45.0%
CTGGTGTACCTTTCTTGTGT+TGG - chr7_2:13846565-13846584 Msa1050010:CDS 45.0%
GCAAGAGATAAGGAAGAAGG+TGG - chr7_2:13846688-13846707 Msa1050010:CDS 45.0%
!!! TAAAATTTTATTTGATAATA+TGG - chr7_2:13846074-13846093 Msa1050010:intron 5.0%
!!! TAAAATTTTATTTGATAATA+TGG - chr7_2:13846074-13846093 Msa1050010:intron 5.0%
CTTGTCTTGCTCGGAAACAC+CGG + chr7_2:13844754-13844773 None:intergenic 50.0%
CAAGTTGTTGCCCACTTCCA+AGG + chr7_2:13844961-13844980 None:intergenic 50.0%
CTTGGAAGTGGGCAACAACT+TGG - chr7_2:13844959-13844978 Msa1050010:intron 50.0%
TCCAGCTTCTGCCACTACTT+TGG - chr7_2:13845004-13845023 Msa1050010:CDS 50.0%
GACAGCACATGCCAAAGTAG+TGG + chr7_2:13845018-13845037 None:intergenic 50.0%
GCTCCTCTGTTGTGGGAAAT+AGG - chr7_2:13845443-13845462 Msa1050010:CDS 50.0%
CTTACGAAGCAAGCAATGGC+TGG + chr7_2:13846507-13846526 None:intergenic 50.0%
CTTGTCTTGCTCGGAAACAC+CGG + chr7_2:13844754-13844773 None:intergenic 50.0%
CAAGTTGTTGCCCACTTCCA+AGG + chr7_2:13844961-13844980 None:intergenic 50.0%
CTTGGAAGTGGGCAACAACT+TGG - chr7_2:13844959-13844978 Msa1050010:intron 50.0%
TCCAGCTTCTGCCACTACTT+TGG - chr7_2:13845004-13845023 Msa1050010:CDS 50.0%
GACAGCACATGCCAAAGTAG+TGG + chr7_2:13845018-13845037 None:intergenic 50.0%
GCTCCTCTGTTGTGGGAAAT+AGG - chr7_2:13845443-13845462 Msa1050010:CDS 50.0%
CTTACGAAGCAAGCAATGGC+TGG + chr7_2:13846507-13846526 None:intergenic 50.0%
GGTGACACTCCCAGATGAGT+TGG - chr7_2:13844782-13844801 Msa1050010:CDS 55.0%
!! TATGGGTTGGGCCTTGGAAG+TGG - chr7_2:13844947-13844966 Msa1050010:intron 55.0%
!! ATGGGTTGGGCCTTGGAAGT+GGG - chr7_2:13844948-13844967 Msa1050010:intron 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG + chr7_2:13845008-13845027 None:intergenic 55.0%
GCTGGGACTCCAAAAGCTCT+GGG + chr7_2:13845714-13845733 None:intergenic 55.0%
TGCTGGGACTCCAAAAGCTC+TGG + chr7_2:13845715-13845734 None:intergenic 55.0%
!!! GAGCTTTTGGAGTCCCAGCA+TGG - chr7_2:13845715-13845734 Msa1050010:intron 55.0%
GTTACACGCAGACCCGACTT+TGG + chr7_2:13845760-13845779 None:intergenic 55.0%
CGAAGCAAGCAATGGCTGGA+TGG + chr7_2:13846503-13846522 None:intergenic 55.0%
GGTGACACTCCCAGATGAGT+TGG - chr7_2:13844782-13844801 Msa1050010:CDS 55.0%
!! TATGGGTTGGGCCTTGGAAG+TGG - chr7_2:13844947-13844966 Msa1050010:intron 55.0%
!! ATGGGTTGGGCCTTGGAAGT+GGG - chr7_2:13844948-13844967 Msa1050010:intron 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG + chr7_2:13845008-13845027 None:intergenic 55.0%
GCTGGGACTCCAAAAGCTCT+GGG + chr7_2:13845714-13845733 None:intergenic 55.0%
TGCTGGGACTCCAAAAGCTC+TGG + chr7_2:13845715-13845734 None:intergenic 55.0%
!!! GAGCTTTTGGAGTCCCAGCA+TGG - chr7_2:13845715-13845734 Msa1050010:intron 55.0%
GTTACACGCAGACCCGACTT+TGG + chr7_2:13845760-13845779 None:intergenic 55.0%
CGAAGCAAGCAATGGCTGGA+TGG + chr7_2:13846503-13846522 None:intergenic 55.0%
ACACGCAGACCCGACTTTGG+AGG + chr7_2:13845757-13845776 None:intergenic 60.0%
ACACGCAGACCCGACTTTGG+AGG + chr7_2:13845757-13845776 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13844669 13846838 13844669 ID=Msa1050010;Name=Msa1050010
chr7_2 mRNA 13844669 13846838 13844669 ID=Msa1050010-mRNA-1;Parent=Msa1050010;Name=Msa1050010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.5|0|1|1|1|3|0|379
chr7_2 exon 13846427 13846838 13846427 ID=Msa1050010-mRNA-1:exon:3405;Parent=Msa1050010-mRNA-1
chr7_2 exon 13844986 13845518 13844986 ID=Msa1050010-mRNA-1:exon:3404;Parent=Msa1050010-mRNA-1
chr7_2 exon 13844669 13844863 13844669 ID=Msa1050010-mRNA-1:exon:3403;Parent=Msa1050010-mRNA-1
chr7_2 CDS 13846427 13846838 13846427 ID=Msa1050010-mRNA-1:cds;Parent=Msa1050010-mRNA-1
chr7_2 CDS 13844986 13845518 13844986 ID=Msa1050010-mRNA-1:cds;Parent=Msa1050010-mRNA-1
chr7_2 CDS 13844669 13844863 13844669 ID=Msa1050010-mRNA-1:cds;Parent=Msa1050010-mRNA-1
Gene Sequence

>Msa1050010

ATGCAATTCTCACAAATCCTAGCCAAACATGGTTGCAAAGTCACTTTTCTACAGACTGAGTTTAACTATAAACGATCGAAAACCGGTGTTTCCGAGCAAGACAAGATACAAGTGGTGACACTCCCAGATGAGTTGGAACCTGAAGATGATAGAAGTGATATAAAGAAAGTTATTTTATCAATTAAAAGCACCATGCCTACTAGACTTCCAAAGCTTATAGAAGAAGTTAATGCTTTGAATGTTGACAACAAGATCAATTGTATTATTGTTACATTTAATATGGGTTGGGCCTTGGAAGTGGGCAACAACTTGGGAATCAAAGGGGCTCTACTTTTTCCAGCTTCTGCCACTACTTTGGCATGTGCTGTCTGCATACCTAAACTTATTGAAGATGGGATTATTGATTCTGAAGGAAATCCAACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATGGACACAACAAACTTTCCATGGCATGGCGTAGATAAAATTTTATTTGATAATATGGTGCAAGAGATGCAAACTTTAAATTTTGGAGAATGGTGGCTTTGTAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATGTCACCAAAGTTCCTACCAATTGGTCCATTGATGGAAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGATACAACTTGCTTAGATTGGTTAGACAAACAAGCACCTCAATTTGTCATATATGTTTCCTTTGGTAGTATGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGATCTTCTTGACAAGCCATTTCTTTGGGTTGTTCGTCCTAGTAATGACAATAAGGTAAACTATGCATACCCTAATGATTTCCATGGAAGTAAAGGTAAAATTGTTAGTTGGGCACCACAAAGTAAAATATTGAACCATCCAGCCATTGCTTGCTTCACTGGACTTGAATTAGAGAAAGATGATAATGGATATATATCAAGGCAAGAGATAAGGAAGAAGGTGGATCAAGTAGTTGGTGATAATGACATAAAGGCAATGTGTTTGAAAATGAAGAAAATGACTACTAATAATATAGAAGAAGGTGGCCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGGGCGAATTAA
Protein sequence

>Msa1050010

MQFSQILAKHGCKVTFLQTEFNYKRSKTGVSEQDKIQVVTLPDELEPEDDRSDIKKVILSIKSTMPTRLPKLIEEVNALNVDNKINCIIVTFNMGWALEVGNNLGIKGALLFPASATTLACAVCIPKLIEDGIIDSEGNPTKKQEIQISPDIPMMDTTNFPWHGVDKILFDNMVQEMQTLNFGEWWLCNTAYDLEPGVFSMSPKFLPIGPLMESNNNKSSFWQEDTTCLDWLDKQAPQFVIYVSFGSMVVMDQNQFNELALGLDLLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVSWAPQSKILNHPAIACFTGLELEKDDNGYISRQEIRKKVDQVVGDNDIKAMCLKMKKMTTNNIEEGGQSSHNLQKFISWAN*