Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055950 | PNX85465.1 | 82.880 | 368 | 62 | 1 | 1 | 368 | 1 | 367 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055950 | sp|Q9SXB4|Y1130_ARATH | 41.333 | 375 | 208 | 7 | 1 | 368 | 1 | 370 | 1.25e-92 | 297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055950 | A0A2K3M3U1 | 82.880 | 368 | 62 | 1 | 1 | 368 | 1 | 367 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1055950 | Msa1104840 | 0.815864 | 7.429702e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055950 | MtrunA17_Chr7g0236651 | 79.121 | 364 | 75 | 1 | 5 | 368 | 3 | 365 | 0.0 | 604 |
| Msa1055950 | MtrunA17_Chr7g0236511 | 75.543 | 368 | 89 | 1 | 1 | 368 | 7 | 373 | 0.0 | 575 |
| Msa1055950 | MtrunA17_Chr7g0236551 | 74.457 | 368 | 88 | 2 | 1 | 368 | 1 | 362 | 0.0 | 563 |
| Msa1055950 | MtrunA17_Chr7g0236691 | 74.457 | 368 | 93 | 1 | 1 | 368 | 1 | 367 | 0.0 | 543 |
| Msa1055950 | MtrunA17_Chr7g0236561 | 74.709 | 344 | 86 | 1 | 25 | 368 | 5 | 347 | 0.0 | 540 |
| Msa1055950 | MtrunA17_Chr4g0055021 | 70.190 | 369 | 108 | 2 | 1 | 368 | 1 | 368 | 0.0 | 531 |
| Msa1055950 | MtrunA17_Chr7g0236641 | 68.293 | 369 | 115 | 2 | 1 | 368 | 1 | 368 | 0.0 | 530 |
| Msa1055950 | MtrunA17_Chr7g0236341 | 71.390 | 367 | 99 | 2 | 1 | 367 | 1 | 361 | 0.0 | 530 |
| Msa1055950 | MtrunA17_Chr7g0236521 | 70.195 | 359 | 92 | 2 | 10 | 368 | 4 | 347 | 5.11e-178 | 500 |
| Msa1055950 | MtrunA17_Chr7g0236471 | 95.755 | 212 | 9 | 0 | 157 | 368 | 1 | 212 | 6.52e-149 | 435 |
| Msa1055950 | MtrunA17_Chr7g0236161 | 56.952 | 374 | 153 | 5 | 1 | 368 | 1 | 372 | 5.75e-146 | 431 |
| Msa1055950 | MtrunA17_Chr7g0236201 | 56.952 | 374 | 153 | 5 | 1 | 368 | 1 | 372 | 1.42e-145 | 431 |
| Msa1055950 | MtrunA17_Chr7g0236121 | 56.952 | 374 | 153 | 5 | 1 | 368 | 1 | 372 | 1.78e-145 | 431 |
| Msa1055950 | MtrunA17_Chr7g0236591 | 76.210 | 248 | 56 | 2 | 1 | 246 | 28 | 274 | 7.09e-130 | 373 |
| Msa1055950 | MtrunA17_Chr2g0280841 | 47.861 | 374 | 179 | 8 | 7 | 368 | 8 | 377 | 2.08e-118 | 350 |
| Msa1055950 | MtrunA17_Chr7g0236231 | 48.413 | 378 | 173 | 8 | 1 | 369 | 11 | 375 | 1.58e-114 | 352 |
| Msa1055950 | MtrunA17_Chr2g0280791 | 46.505 | 372 | 184 | 9 | 8 | 368 | 4 | 371 | 3.20e-107 | 333 |
| Msa1055950 | MtrunA17_Chr7g0236571 | 69.953 | 213 | 63 | 1 | 157 | 369 | 9 | 220 | 2.13e-101 | 313 |
| Msa1055950 | MtrunA17_Chr2g0280801 | 45.213 | 376 | 186 | 10 | 7 | 368 | 8 | 377 | 3.93e-101 | 317 |
| Msa1055950 | MtrunA17_Chr8g0340061 | 41.644 | 365 | 203 | 4 | 8 | 368 | 10 | 368 | 7.45e-95 | 292 |
| Msa1055950 | MtrunA17_Chr2g0280771 | 44.297 | 377 | 186 | 11 | 9 | 368 | 1 | 370 | 1.60e-94 | 295 |
| Msa1055950 | MtrunA17_Chr2g0280781 | 44.533 | 375 | 185 | 11 | 9 | 368 | 1 | 367 | 1.85e-93 | 296 |
| Msa1055950 | MtrunA17_Chr8g0340071 | 41.209 | 364 | 207 | 4 | 8 | 368 | 10 | 369 | 6.42e-90 | 287 |
| Msa1055950 | MtrunA17_Chr8g0340081 | 41.047 | 363 | 208 | 3 | 8 | 368 | 12 | 370 | 4.52e-89 | 285 |
| Msa1055950 | MtrunA17_Chr8g0340111 | 43.103 | 348 | 185 | 6 | 28 | 368 | 31 | 372 | 1.09e-86 | 279 |
| Msa1055950 | MtrunA17_Chr4g0048581 | 40.111 | 359 | 202 | 9 | 17 | 369 | 23 | 374 | 1.38e-77 | 255 |
| Msa1055950 | MtrunA17_Chr8g0340091 | 38.292 | 363 | 187 | 6 | 9 | 366 | 63 | 393 | 2.35e-75 | 249 |
| Msa1055950 | MtrunA17_Chr4g0023071 | 34.232 | 371 | 228 | 8 | 9 | 368 | 6 | 371 | 1.13e-72 | 241 |
| Msa1055950 | MtrunA17_Chr2g0280681 | 37.568 | 370 | 206 | 7 | 10 | 368 | 6 | 361 | 1.67e-69 | 233 |
| Msa1055950 | MtrunA17_Chr8g0361261 | 38.950 | 362 | 198 | 11 | 12 | 365 | 42 | 388 | 1.75e-68 | 230 |
| Msa1055950 | MtrunA17_Chr2g0323301 | 34.341 | 364 | 225 | 8 | 13 | 368 | 13 | 370 | 1.46e-67 | 228 |
| Msa1055950 | MtrunA17_Chr8g0361311 | 37.293 | 362 | 203 | 11 | 13 | 365 | 11 | 357 | 4.08e-67 | 219 |
| Msa1055950 | MtrunA17_Chr8g0361301 | 38.398 | 362 | 200 | 11 | 12 | 365 | 11 | 357 | 1.63e-66 | 224 |
| Msa1055950 | MtrunA17_Chr5g0428101 | 37.677 | 353 | 201 | 8 | 20 | 365 | 22 | 362 | 2.58e-66 | 224 |
| Msa1055950 | MtrunA17_Chr2g0280731 | 38.342 | 386 | 187 | 17 | 6 | 369 | 12 | 368 | 5.03e-66 | 224 |
| Msa1055950 | MtrunA17_Chr5g0422921 | 36.828 | 372 | 203 | 9 | 9 | 365 | 1 | 355 | 6.12e-66 | 223 |
| Msa1055950 | MtrunA17_Chr8g0361441 | 35.770 | 383 | 196 | 12 | 8 | 365 | 4 | 361 | 2.68e-64 | 219 |
| Msa1055950 | MtrunA17_Chr8g0361431 | 37.569 | 362 | 204 | 8 | 9 | 363 | 16 | 362 | 2.69e-64 | 218 |
| Msa1055950 | MtrunA17_Chr8g0361251 | 37.293 | 362 | 203 | 11 | 13 | 365 | 11 | 357 | 4.89e-64 | 218 |
| Msa1055950 | MtrunA17_Chr4g0048631 | 36.134 | 357 | 196 | 10 | 28 | 369 | 28 | 367 | 4.98e-64 | 218 |
| Msa1055950 | MtrunA17_Chr4g0020081 | 38.320 | 381 | 185 | 17 | 12 | 369 | 11 | 364 | 1.11e-63 | 217 |
| Msa1055950 | MtrunA17_Chr4g0048651 | 32.620 | 374 | 224 | 9 | 9 | 367 | 28 | 388 | 4.97e-63 | 209 |
| Msa1055950 | MtrunA17_Chr2g0318841 | 36.264 | 364 | 209 | 9 | 11 | 365 | 3 | 352 | 6.07e-63 | 215 |
| Msa1055950 | MtrunA17_Chr4g0042361 | 36.467 | 351 | 198 | 9 | 28 | 365 | 60 | 398 | 8.77e-63 | 215 |
| Msa1055950 | MtrunA17_Chr2g0318831 | 35.246 | 366 | 212 | 9 | 9 | 365 | 6 | 355 | 2.10e-62 | 213 |
| Msa1055950 | MtrunA17_Chr2g0280751 | 38.587 | 368 | 170 | 16 | 29 | 369 | 35 | 373 | 2.12e-62 | 214 |
| Msa1055950 | MtrunA17_Chr2g0280691 | 34.316 | 373 | 211 | 10 | 10 | 369 | 9 | 360 | 2.52e-62 | 213 |
| Msa1055950 | MtrunA17_Chr4g0048721 | 32.283 | 381 | 223 | 11 | 8 | 367 | 6 | 372 | 1.13e-61 | 205 |
| Msa1055950 | MtrunA17_Chr4g0048691 | 32.773 | 357 | 208 | 10 | 28 | 367 | 47 | 388 | 1.35e-60 | 203 |
| Msa1055950 | MtrunA17_Chr5g0428111 | 35.977 | 353 | 207 | 8 | 20 | 365 | 23 | 363 | 1.93e-60 | 208 |
| Msa1055950 | MtrunA17_Chr4g0042341 | 33.773 | 379 | 211 | 11 | 9 | 365 | 5 | 365 | 4.82e-59 | 204 |
| Msa1055950 | MtrunA17_Chr3g0093161 | 33.607 | 366 | 223 | 9 | 7 | 365 | 2 | 354 | 6.72e-59 | 204 |
| Msa1055950 | MtrunA17_Chr4g0048741 | 33.333 | 369 | 219 | 8 | 13 | 367 | 27 | 382 | 7.07e-59 | 204 |
| Msa1055950 | MtrunA17_Chr4g0048761 | 33.333 | 366 | 219 | 9 | 13 | 365 | 27 | 380 | 9.21e-59 | 201 |
| Msa1055950 | MtrunA17_Chr3g0078541 | 36.389 | 360 | 199 | 11 | 27 | 368 | 37 | 384 | 2.67e-58 | 202 |
| Msa1055950 | MtrunA17_Chr2g0280711 | 34.181 | 354 | 203 | 10 | 30 | 369 | 30 | 367 | 9.46e-58 | 201 |
| Msa1055950 | MtrunA17_Chr3g0078521 | 35.106 | 376 | 211 | 11 | 9 | 365 | 9 | 370 | 4.40e-57 | 199 |
| Msa1055950 | MtrunA17_Chr3g0084451 | 33.529 | 340 | 210 | 5 | 29 | 365 | 31 | 357 | 6.49e-57 | 198 |
| Msa1055950 | MtrunA17_Chr3g0084491 | 34.694 | 343 | 204 | 7 | 29 | 365 | 44 | 372 | 8.34e-57 | 198 |
| Msa1055950 | MtrunA17_Chr2g0318811 | 33.607 | 366 | 216 | 9 | 10 | 365 | 4 | 352 | 1.94e-56 | 197 |
| Msa1055950 | MtrunA17_Chr3g0078551 | 36.550 | 342 | 186 | 11 | 16 | 335 | 16 | 348 | 2.63e-56 | 197 |
| Msa1055950 | MtrunA17_Chr4g0042351 | 34.758 | 351 | 188 | 9 | 30 | 365 | 28 | 352 | 4.46e-56 | 196 |
| Msa1055950 | MtrunA17_Chr4g0048801 | 33.711 | 353 | 209 | 10 | 27 | 365 | 21 | 362 | 1.56e-55 | 194 |
| Msa1055950 | MtrunA17_Chr2g0280701 | 34.254 | 362 | 217 | 8 | 12 | 364 | 6 | 355 | 1.63e-55 | 194 |
| Msa1055950 | MtrunA17_Chr3g0084691 | 34.985 | 343 | 202 | 7 | 29 | 365 | 31 | 358 | 1.69e-55 | 194 |
| Msa1055950 | MtrunA17_Chr3g0098791 | 34.294 | 347 | 202 | 6 | 27 | 365 | 31 | 359 | 3.12e-55 | 191 |
| Msa1055950 | MtrunA17_Chr3g0084621 | 33.626 | 342 | 210 | 6 | 29 | 365 | 31 | 360 | 5.51e-55 | 190 |
| Msa1055950 | MtrunA17_Chr3g0084411 | 33.699 | 365 | 216 | 10 | 12 | 365 | 8 | 357 | 2.32e-54 | 191 |
| Msa1055950 | MtrunA17_Chr3g0078531 | 35.465 | 344 | 202 | 8 | 9 | 335 | 19 | 359 | 4.72e-54 | 191 |
| Msa1055950 | MtrunA17_Chr3g0084681 | 34.884 | 344 | 203 | 7 | 29 | 365 | 31 | 360 | 7.24e-54 | 189 |
| Msa1055950 | MtrunA17_Chr3g0084651 | 32.877 | 365 | 222 | 7 | 12 | 365 | 8 | 360 | 8.95e-54 | 183 |
| Msa1055950 | MtrunA17_Chr8g0361281 | 31.865 | 386 | 214 | 11 | 9 | 369 | 3 | 364 | 4.36e-53 | 188 |
| Msa1055950 | MtrunA17_Chr4g0042421 | 31.926 | 379 | 210 | 13 | 12 | 365 | 5 | 360 | 4.39e-53 | 186 |
| Msa1055950 | MtrunA17_Chr4g0042401 | 32.891 | 377 | 209 | 13 | 12 | 365 | 5 | 360 | 1.17e-52 | 186 |
| Msa1055950 | MtrunA17_Chr4g0042441 | 31.335 | 367 | 227 | 9 | 12 | 365 | 5 | 359 | 3.13e-52 | 185 |
| Msa1055950 | MtrunA17_Chr3g0084441 | 32.948 | 346 | 210 | 7 | 29 | 365 | 31 | 363 | 1.05e-51 | 184 |
| Msa1055950 | MtrunA17_Chr4g0048791 | 32.386 | 352 | 211 | 9 | 28 | 365 | 41 | 379 | 2.40e-51 | 183 |
| Msa1055950 | MtrunA17_Chr4g0042391 | 32.743 | 339 | 211 | 6 | 30 | 365 | 28 | 352 | 3.08e-51 | 182 |
| Msa1055950 | MtrunA17_Chr4g0023221 | 33.000 | 400 | 205 | 13 | 3 | 365 | 18 | 391 | 4.49e-51 | 183 |
| Msa1055950 | MtrunA17_Chr4g0048641 | 32.456 | 342 | 177 | 9 | 36 | 365 | 57 | 356 | 1.52e-50 | 180 |
| Msa1055950 | MtrunA17_Chr4g0042381 | 33.634 | 333 | 201 | 8 | 38 | 365 | 35 | 352 | 9.79e-50 | 178 |
| Msa1055950 | MtrunA17_Chr3g0084431 | 32.659 | 346 | 202 | 8 | 29 | 365 | 31 | 354 | 2.90e-47 | 171 |
| Msa1055950 | MtrunA17_Chr3g0084421 | 33.750 | 320 | 191 | 7 | 53 | 365 | 14 | 319 | 7.53e-47 | 170 |
| Msa1055950 | MtrunA17_Chr2g0323341 | 37.778 | 225 | 134 | 4 | 145 | 368 | 62 | 281 | 3.34e-43 | 159 |
| Msa1055950 | MtrunA17_Chr7g0236661 | 79.268 | 82 | 17 | 0 | 23 | 104 | 1 | 82 | 4.21e-41 | 139 |
| Msa1055950 | MtrunA17_Chr8g0361151 | 31.322 | 348 | 206 | 11 | 9 | 346 | 15 | 339 | 4.02e-39 | 144 |
| Msa1055950 | MtrunA17_Chr2g0323241 | 30.628 | 382 | 211 | 18 | 9 | 365 | 6 | 358 | 1.26e-37 | 140 |
| Msa1055950 | MtrunA17_Chr8g0361141 | 31.105 | 344 | 194 | 9 | 5 | 340 | 17 | 325 | 9.21e-37 | 141 |
| Msa1055950 | MtrunA17_Chr7g0236411 | 63.415 | 82 | 30 | 0 | 195 | 276 | 30 | 111 | 9.31e-32 | 115 |
| Msa1055950 | MtrunA17_Chr1g0162031 | 33.824 | 204 | 101 | 5 | 167 | 369 | 13 | 183 | 3.84e-31 | 118 |
| Msa1055950 | MtrunA17_Chr8g0348661 | 29.022 | 317 | 205 | 11 | 29 | 334 | 14 | 321 | 4.50e-31 | 124 |
| Msa1055950 | MtrunA17_Chr4g0055001 | 70.833 | 72 | 21 | 0 | 297 | 368 | 14 | 85 | 8.85e-31 | 114 |
| Msa1055950 | MtrunA17_Chr6g0453581 | 39.157 | 166 | 91 | 4 | 9 | 164 | 4 | 169 | 1.21e-30 | 115 |
| Msa1055950 | MtrunA17_Chr4g0023111 | 30.227 | 397 | 206 | 20 | 8 | 366 | 13 | 376 | 1.60e-27 | 114 |
| Msa1055950 | MtrunA17_Chr8g0360201 | 30.078 | 256 | 151 | 7 | 112 | 366 | 9 | 237 | 4.18e-27 | 112 |
| Msa1055950 | MtrunA17_Chr0c04g0492001 | 31.034 | 348 | 191 | 20 | 37 | 363 | 36 | 355 | 1.25e-25 | 108 |
| Msa1055950 | MtrunA17_Chr0c04g0492031 | 31.034 | 348 | 191 | 20 | 37 | 363 | 36 | 355 | 2.07e-25 | 108 |
| Msa1055950 | MtrunA17_Chr3g0134291 | 31.034 | 348 | 191 | 20 | 37 | 363 | 36 | 355 | 2.44e-25 | 107 |
| Msa1055950 | MtrunA17_Chr6g0453571 | 32.243 | 214 | 119 | 8 | 157 | 365 | 4 | 196 | 2.73e-22 | 97.4 |
| Msa1055950 | MtrunA17_Chr3g0106221 | 28.490 | 351 | 203 | 18 | 36 | 361 | 29 | 356 | 1.93e-21 | 96.3 |
| Msa1055950 | MtrunA17_Chr3g0106211 | 28.729 | 362 | 207 | 17 | 9 | 349 | 9 | 340 | 2.35e-21 | 95.9 |
| Msa1055950 | MtrunA17_Chr3g0106151 | 27.401 | 354 | 188 | 16 | 38 | 366 | 34 | 343 | 1.01e-20 | 94.0 |
| Msa1055950 | MtrunA17_Chr7g0274221 | 56.842 | 95 | 24 | 6 | 288 | 368 | 2 | 93 | 1.08e-20 | 87.8 |
| Msa1055950 | MtrunA17_Chr7g0237331 | 27.635 | 351 | 203 | 15 | 32 | 362 | 33 | 352 | 2.00e-20 | 93.2 |
| Msa1055950 | MtrunA17_Chr1g0202331 | 25.356 | 351 | 199 | 19 | 5 | 314 | 8 | 336 | 3.17e-20 | 92.4 |
| Msa1055950 | MtrunA17_Chr8g0357631 | 26.923 | 286 | 183 | 6 | 27 | 309 | 36 | 298 | 1.73e-19 | 90.1 |
| Msa1055950 | MtrunA17_Chr3g0106131 | 30.030 | 333 | 187 | 17 | 36 | 347 | 27 | 334 | 3.35e-19 | 89.4 |
| Msa1055950 | MtrunA17_Chr7g0237341 | 26.686 | 341 | 203 | 14 | 36 | 358 | 36 | 347 | 4.28e-19 | 89.0 |
| Msa1055950 | MtrunA17_Chr7g0236601 | 64.815 | 54 | 19 | 0 | 256 | 309 | 1 | 54 | 1.29e-18 | 79.0 |
| Msa1055950 | MtrunA17_Chr3g0106141 | 26.404 | 356 | 221 | 16 | 12 | 350 | 6 | 337 | 2.27e-18 | 87.0 |
| Msa1055950 | MtrunA17_Chr4g0053161 | 27.596 | 337 | 197 | 14 | 40 | 358 | 60 | 367 | 5.12e-18 | 85.9 |
| Msa1055950 | MtrunA17_Chr3g0106201 | 26.111 | 360 | 218 | 15 | 12 | 350 | 6 | 338 | 1.27e-17 | 84.7 |
| Msa1055950 | MtrunA17_Chr8g0357651 | 30.131 | 229 | 137 | 7 | 41 | 264 | 50 | 260 | 3.38e-17 | 83.2 |
| Msa1055950 | MtrunA17_Chr3g0106121 | 27.019 | 359 | 192 | 19 | 36 | 362 | 27 | 347 | 3.41e-17 | 83.2 |
| Msa1055950 | MtrunA17_Chr7g0237351 | 28.155 | 309 | 174 | 12 | 40 | 323 | 41 | 326 | 7.38e-17 | 82.4 |
| Msa1055950 | MtrunA17_Chr4g0063691 | 24.848 | 330 | 206 | 14 | 44 | 347 | 54 | 367 | 9.24e-17 | 82.0 |
| Msa1055950 | MtrunA17_Chr7g0237391 | 28.107 | 338 | 196 | 14 | 40 | 359 | 40 | 348 | 1.98e-16 | 80.9 |
| Msa1055950 | MtrunA17_Chr8g0357801 | 27.304 | 293 | 180 | 11 | 28 | 309 | 33 | 303 | 2.22e-16 | 80.5 |
| Msa1055950 | MtrunA17_Chr8g0357711 | 28.058 | 278 | 169 | 10 | 42 | 309 | 51 | 307 | 8.38e-16 | 79.0 |
| Msa1055950 | MtrunA17_Chr4g0048671 | 45.714 | 70 | 36 | 1 | 28 | 95 | 25 | 94 | 1.87e-15 | 71.2 |
| Msa1055950 | MtrunA17_Chr8g0357691 | 29.319 | 191 | 125 | 6 | 28 | 212 | 37 | 223 | 2.71e-15 | 77.4 |
| Msa1055950 | MtrunA17_Chr8g0357681 | 28.369 | 282 | 165 | 10 | 41 | 309 | 52 | 309 | 3.42e-15 | 76.3 |
| Msa1055950 | MtrunA17_Chr2g0314611 | 25.146 | 342 | 188 | 12 | 8 | 315 | 18 | 325 | 8.40e-15 | 75.9 |
| Msa1055950 | MtrunA17_Chr8g0357881 | 29.775 | 178 | 113 | 5 | 42 | 212 | 52 | 224 | 1.26e-14 | 75.5 |
| Msa1055950 | MtrunA17_Chr8g0358031 | 26.160 | 237 | 152 | 6 | 41 | 271 | 46 | 265 | 1.29e-14 | 75.5 |
| Msa1055950 | MtrunA17_Chr8g0357761 | 27.465 | 284 | 165 | 11 | 41 | 309 | 53 | 310 | 1.66e-14 | 75.1 |
| Msa1055950 | MtrunA17_Chr8g0358071 | 26.027 | 219 | 138 | 6 | 42 | 254 | 46 | 246 | 2.20e-14 | 74.7 |
| Msa1055950 | MtrunA17_Chr7g0236671 | 49.091 | 55 | 28 | 0 | 210 | 264 | 5 | 59 | 2.24e-14 | 68.2 |
| Msa1055950 | MtrunA17_Chr3g0134321 | 29.947 | 187 | 108 | 10 | 37 | 214 | 33 | 205 | 4.82e-14 | 73.6 |
| Msa1055950 | MtrunA17_Chr1g0149381 | 32.558 | 172 | 96 | 8 | 42 | 209 | 58 | 213 | 5.43e-14 | 73.6 |
| Msa1055950 | MtrunA17_Chr8g0357991 | 27.982 | 218 | 131 | 6 | 42 | 254 | 45 | 241 | 7.31e-14 | 73.2 |
| Msa1055950 | MtrunA17_Chr8g0357821 | 31.081 | 148 | 98 | 3 | 42 | 185 | 54 | 201 | 1.31e-13 | 69.3 |
| Msa1055950 | MtrunA17_Chr8g0357931 | 27.749 | 191 | 127 | 4 | 28 | 212 | 32 | 217 | 3.26e-13 | 70.9 |
| Msa1055950 | MtrunA17_Chr3g0137741 | 29.167 | 192 | 121 | 5 | 19 | 209 | 30 | 207 | 3.67e-13 | 70.9 |
| Msa1055950 | MtrunA17_Chr8g0357961 | 26.724 | 232 | 144 | 6 | 28 | 254 | 32 | 242 | 6.42e-13 | 70.1 |
| Msa1055950 | MtrunA17_Chr1g0191111 | 28.643 | 199 | 122 | 7 | 21 | 212 | 40 | 225 | 7.89e-13 | 68.2 |
| Msa1055950 | MtrunA17_Chr8g0358151 | 28.095 | 210 | 133 | 9 | 73 | 274 | 72 | 271 | 1.14e-12 | 68.6 |
| Msa1055950 | MtrunA17_Chr2g0318171 | 30.178 | 169 | 99 | 5 | 19 | 185 | 33 | 184 | 1.57e-12 | 68.9 |
| Msa1055950 | MtrunA17_Chr4g0063701 | 25.843 | 356 | 199 | 18 | 1 | 316 | 3 | 333 | 1.65e-12 | 68.9 |
| Msa1055950 | MtrunA17_Chr2g0315851 | 33.099 | 142 | 85 | 5 | 75 | 214 | 93 | 226 | 2.53e-12 | 67.8 |
| Msa1055950 | MtrunA17_Chr6g0467281 | 24.830 | 294 | 164 | 10 | 64 | 338 | 61 | 316 | 3.40e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055950 | AT1G11300.1 | 41.333 | 375 | 208 | 7 | 1 | 368 | 1 | 370 | 1.27e-93 | 297 |
| Msa1055950 | AT1G11300.2 | 41.333 | 375 | 208 | 7 | 1 | 368 | 1 | 370 | 1.47e-93 | 297 |
| Msa1055950 | AT1G11303.1 | 41.713 | 362 | 195 | 8 | 16 | 368 | 16 | 370 | 6.71e-90 | 288 |
| Msa1055950 | AT1G11330.3 | 43.417 | 357 | 183 | 11 | 26 | 368 | 29 | 380 | 4.11e-87 | 278 |
| Msa1055950 | AT1G11330.1 | 43.417 | 357 | 183 | 11 | 26 | 368 | 29 | 380 | 3.02e-86 | 278 |
| Msa1055950 | AT1G11330.2 | 43.417 | 357 | 183 | 11 | 26 | 368 | 29 | 380 | 3.06e-86 | 278 |
| Msa1055950 | AT1G11350.1 | 41.292 | 356 | 196 | 9 | 18 | 364 | 13 | 364 | 2.01e-85 | 276 |
| Msa1055950 | AT1G61610.2 | 38.636 | 352 | 201 | 7 | 28 | 369 | 30 | 376 | 1.59e-79 | 259 |
| Msa1055950 | AT1G61610.1 | 38.636 | 352 | 201 | 7 | 28 | 369 | 30 | 376 | 5.67e-79 | 259 |
| Msa1055950 | AT4G21390.2 | 35.526 | 380 | 219 | 11 | 1 | 366 | 1 | 368 | 1.93e-70 | 234 |
| Msa1055950 | AT4G21390.1 | 35.526 | 380 | 219 | 11 | 1 | 366 | 1 | 368 | 4.11e-70 | 235 |
| Msa1055950 | AT1G61420.1 | 38.369 | 331 | 194 | 6 | 40 | 368 | 36 | 358 | 2.22e-67 | 227 |
| Msa1055950 | AT1G61420.2 | 38.369 | 331 | 194 | 6 | 40 | 368 | 36 | 358 | 2.32e-67 | 227 |
| Msa1055950 | AT1G61420.4 | 38.369 | 331 | 194 | 6 | 40 | 368 | 36 | 358 | 2.32e-67 | 227 |
| Msa1055950 | AT2G19130.1 | 34.699 | 366 | 217 | 9 | 14 | 369 | 10 | 363 | 2.76e-67 | 227 |
| Msa1055950 | AT1G61500.1 | 37.151 | 358 | 215 | 5 | 13 | 368 | 10 | 359 | 8.68e-66 | 223 |
| Msa1055950 | AT1G61500.3 | 37.151 | 358 | 215 | 5 | 13 | 368 | 15 | 364 | 9.04e-66 | 223 |
| Msa1055950 | AT1G61550.1 | 36.364 | 363 | 211 | 7 | 9 | 368 | 8 | 353 | 1.08e-65 | 223 |
| Msa1055950 | AT1G61440.1 | 35.043 | 351 | 218 | 5 | 20 | 368 | 9 | 351 | 1.63e-65 | 222 |
| Msa1055950 | AT1G61440.3 | 35.043 | 351 | 218 | 5 | 20 | 368 | 9 | 351 | 1.82e-65 | 222 |
| Msa1055950 | AT1G61440.2 | 35.043 | 351 | 218 | 5 | 20 | 368 | 9 | 351 | 2.51e-65 | 222 |
| Msa1055950 | AT1G61360.1 | 36.856 | 369 | 213 | 8 | 13 | 369 | 1 | 361 | 7.85e-65 | 220 |
| Msa1055950 | AT4G27290.1 | 34.409 | 372 | 217 | 7 | 6 | 365 | 3 | 359 | 1.11e-64 | 219 |
| Msa1055950 | AT1G61390.1 | 34.247 | 365 | 227 | 8 | 13 | 369 | 24 | 383 | 1.62e-64 | 220 |
| Msa1055950 | AT4G27290.2 | 34.409 | 372 | 217 | 7 | 6 | 365 | 3 | 359 | 1.75e-64 | 219 |
| Msa1055950 | AT1G61370.1 | 35.946 | 370 | 211 | 10 | 11 | 368 | 11 | 366 | 1.91e-64 | 219 |
| Msa1055950 | AT1G61500.2 | 37.719 | 342 | 203 | 5 | 29 | 368 | 8 | 341 | 1.97e-64 | 219 |
| Msa1055950 | AT1G61380.1 | 34.341 | 364 | 228 | 7 | 9 | 368 | 5 | 361 | 2.19e-63 | 216 |
| Msa1055950 | AT1G11280.5 | 35.112 | 356 | 214 | 5 | 21 | 368 | 21 | 367 | 3.01e-63 | 214 |
| Msa1055950 | AT1G61480.1 | 35.890 | 365 | 215 | 7 | 9 | 368 | 8 | 358 | 3.51e-63 | 216 |
| Msa1055950 | AT1G11280.3 | 35.112 | 356 | 214 | 5 | 21 | 368 | 21 | 367 | 1.20e-62 | 214 |
| Msa1055950 | AT1G11280.2 | 35.112 | 356 | 214 | 5 | 21 | 368 | 21 | 367 | 1.29e-62 | 214 |
| Msa1055950 | AT1G11280.4 | 35.112 | 356 | 214 | 5 | 21 | 368 | 31 | 377 | 1.44e-62 | 214 |
| Msa1055950 | AT1G11280.1 | 35.112 | 356 | 214 | 5 | 21 | 368 | 31 | 377 | 1.70e-62 | 214 |
| Msa1055950 | AT1G61400.1 | 36.254 | 331 | 201 | 5 | 40 | 368 | 46 | 368 | 4.20e-62 | 213 |
| Msa1055950 | AT1G61400.2 | 36.254 | 331 | 201 | 5 | 40 | 368 | 46 | 368 | 4.53e-62 | 213 |
| Msa1055950 | AT4G21380.2 | 35.174 | 344 | 203 | 7 | 29 | 365 | 33 | 363 | 8.99e-62 | 209 |
| Msa1055950 | AT1G61490.4 | 34.530 | 362 | 223 | 7 | 12 | 368 | 6 | 358 | 1.74e-61 | 211 |
| Msa1055950 | AT1G61490.1 | 34.530 | 362 | 223 | 7 | 12 | 368 | 6 | 358 | 1.74e-61 | 211 |
| Msa1055950 | AT1G61490.2 | 34.530 | 362 | 223 | 7 | 12 | 368 | 6 | 358 | 1.74e-61 | 211 |
| Msa1055950 | AT1G61490.5 | 34.530 | 362 | 223 | 7 | 12 | 368 | 6 | 358 | 1.74e-61 | 211 |
| Msa1055950 | AT1G11340.2 | 33.144 | 353 | 217 | 7 | 25 | 369 | 85 | 426 | 4.27e-61 | 209 |
| Msa1055950 | AT1G11340.3 | 33.144 | 353 | 217 | 7 | 25 | 369 | 85 | 426 | 7.57e-61 | 209 |
| Msa1055950 | AT1G11340.1 | 33.144 | 353 | 217 | 7 | 25 | 369 | 17 | 358 | 1.17e-60 | 209 |
| Msa1055950 | AT4G21380.1 | 35.843 | 332 | 193 | 7 | 41 | 365 | 45 | 363 | 1.87e-60 | 209 |
| Msa1055950 | AT1G65790.3 | 35.191 | 341 | 203 | 7 | 29 | 365 | 31 | 357 | 8.88e-60 | 203 |
| Msa1055950 | AT1G65790.2 | 35.191 | 341 | 203 | 7 | 29 | 365 | 31 | 357 | 8.88e-60 | 203 |
| Msa1055950 | AT1G61430.4 | 34.731 | 334 | 201 | 6 | 40 | 368 | 13 | 334 | 1.37e-59 | 202 |
| Msa1055950 | AT1G61430.2 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 1.59e-59 | 202 |
| Msa1055950 | AT1G61430.6 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 1.59e-59 | 202 |
| Msa1055950 | AT1G61430.3 | 34.195 | 348 | 212 | 6 | 26 | 368 | 31 | 366 | 1.82e-59 | 202 |
| Msa1055950 | AT1G61490.6 | 34.530 | 362 | 197 | 9 | 12 | 368 | 6 | 332 | 5.11e-59 | 204 |
| Msa1055950 | AT1G61490.7 | 34.530 | 362 | 197 | 9 | 12 | 368 | 6 | 332 | 5.11e-59 | 204 |
| Msa1055950 | AT1G61430.10 | 34.731 | 334 | 201 | 6 | 40 | 368 | 13 | 334 | 8.82e-59 | 202 |
| Msa1055950 | AT1G61430.8 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 1.40e-58 | 202 |
| Msa1055950 | AT1G61430.7 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 1.40e-58 | 202 |
| Msa1055950 | AT1G61430.5 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 1.58e-58 | 202 |
| Msa1055950 | AT1G65790.1 | 35.191 | 341 | 203 | 7 | 29 | 365 | 31 | 357 | 1.71e-58 | 203 |
| Msa1055950 | AT1G11410.1 | 33.048 | 351 | 214 | 8 | 28 | 369 | 23 | 361 | 2.49e-58 | 203 |
| Msa1055950 | AT1G61430.9 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 2.83e-58 | 202 |
| Msa1055950 | AT1G61430.11 | 34.731 | 334 | 201 | 6 | 40 | 368 | 13 | 334 | 3.20e-58 | 202 |
| Msa1055950 | AT1G61430.12 | 34.731 | 334 | 201 | 6 | 40 | 368 | 13 | 334 | 3.20e-58 | 202 |
| Msa1055950 | AT1G61430.13 | 34.731 | 334 | 201 | 6 | 40 | 368 | 13 | 334 | 3.20e-58 | 202 |
| Msa1055950 | AT1G61430.1 | 34.731 | 334 | 201 | 6 | 40 | 368 | 36 | 357 | 3.22e-58 | 202 |
| Msa1055950 | AT1G11410.4 | 33.048 | 351 | 214 | 8 | 28 | 369 | 30 | 368 | 4.31e-58 | 202 |
| Msa1055950 | AT1G65800.2 | 34.670 | 349 | 206 | 9 | 29 | 369 | 31 | 365 | 1.15e-57 | 197 |
| Msa1055950 | AT1G11410.3 | 32.945 | 343 | 209 | 8 | 36 | 369 | 7 | 337 | 6.46e-57 | 199 |
| Msa1055950 | AT1G65800.1 | 34.770 | 348 | 205 | 9 | 29 | 368 | 31 | 364 | 1.48e-56 | 198 |
| Msa1055950 | AT3G12000.1 | 32.861 | 353 | 209 | 11 | 27 | 364 | 32 | 371 | 8.85e-55 | 186 |
| Msa1055950 | AT1G61460.1 | 32.628 | 331 | 178 | 6 | 40 | 368 | 37 | 324 | 8.39e-52 | 184 |
| Msa1055950 | AT4G27300.1 | 33.894 | 357 | 206 | 12 | 23 | 365 | 21 | 361 | 5.45e-48 | 174 |
| Msa1055950 | AT1G61360.2 | 36.491 | 285 | 167 | 6 | 91 | 369 | 4 | 280 | 1.26e-46 | 169 |
| Msa1055950 | AT1G61360.3 | 36.491 | 285 | 167 | 6 | 91 | 369 | 4 | 280 | 1.26e-46 | 169 |
| Msa1055950 | AT1G61360.4 | 36.491 | 285 | 167 | 6 | 91 | 369 | 4 | 280 | 1.26e-46 | 169 |
| Msa1055950 | AT4G03230.8 | 31.915 | 376 | 221 | 13 | 8 | 365 | 4 | 362 | 7.28e-45 | 165 |
| Msa1055950 | AT4G03230.4 | 33.136 | 338 | 197 | 11 | 40 | 365 | 42 | 362 | 1.40e-44 | 164 |
| Msa1055950 | AT4G03230.1 | 33.136 | 338 | 197 | 11 | 40 | 365 | 42 | 362 | 1.40e-44 | 164 |
| Msa1055950 | AT4G00340.2 | 32.081 | 346 | 213 | 10 | 29 | 363 | 20 | 354 | 1.77e-44 | 164 |
| Msa1055950 | AT4G00340.1 | 32.081 | 346 | 213 | 10 | 29 | 363 | 20 | 354 | 2.16e-44 | 164 |
| Msa1055950 | AT1G11410.2 | 30.120 | 249 | 161 | 4 | 123 | 369 | 9 | 246 | 2.56e-35 | 137 |
| Msa1055950 | AT1G61420.3 | 38.426 | 216 | 125 | 5 | 153 | 368 | 1 | 208 | 2.57e-35 | 137 |
| Msa1055950 | AT1G61420.5 | 38.426 | 216 | 125 | 5 | 153 | 368 | 1 | 208 | 2.59e-35 | 137 |
| Msa1055950 | AT1G61370.2 | 39.904 | 208 | 104 | 8 | 171 | 368 | 19 | 215 | 4.72e-35 | 136 |
| Msa1055950 | AT4G11900.10 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 2.49e-33 | 131 |
| Msa1055950 | AT4G11900.5 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 2.49e-33 | 131 |
| Msa1055950 | AT4G11900.7 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 3.12e-33 | 131 |
| Msa1055950 | AT1G67520.4 | 34.746 | 236 | 140 | 5 | 28 | 252 | 25 | 257 | 3.47e-33 | 131 |
| Msa1055950 | AT4G11900.6 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 3.77e-33 | 130 |
| Msa1055950 | AT4G11900.4 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 3.77e-33 | 130 |
| Msa1055950 | AT4G11900.2 | 28.392 | 398 | 222 | 18 | 8 | 363 | 7 | 383 | 3.93e-33 | 130 |
| Msa1055950 | AT4G11900.3 | 28.392 | 398 | 222 | 18 | 8 | 363 | 7 | 383 | 3.93e-33 | 130 |
| Msa1055950 | AT4G11900.1 | 27.833 | 406 | 214 | 19 | 8 | 363 | 7 | 383 | 4.40e-33 | 131 |
| Msa1055950 | AT1G67520.1 | 35.983 | 239 | 132 | 7 | 28 | 253 | 25 | 255 | 5.80e-33 | 129 |
| Msa1055950 | AT1G67520.2 | 35.021 | 237 | 137 | 6 | 28 | 253 | 25 | 255 | 6.25e-33 | 130 |
| Msa1055950 | AT1G67520.6 | 35.021 | 237 | 137 | 6 | 28 | 253 | 32 | 262 | 1.06e-32 | 130 |
| Msa1055950 | AT1G67520.3 | 35.021 | 237 | 137 | 6 | 28 | 253 | 25 | 255 | 1.06e-32 | 130 |
| Msa1055950 | AT1G61390.2 | 34.091 | 220 | 137 | 6 | 153 | 369 | 1 | 215 | 1.80e-31 | 125 |
| Msa1055950 | AT1G61380.2 | 33.945 | 218 | 138 | 5 | 153 | 368 | 1 | 214 | 7.10e-30 | 121 |
| Msa1055950 | AT4G03230.5 | 31.900 | 279 | 165 | 9 | 95 | 365 | 29 | 290 | 7.41e-30 | 121 |
| Msa1055950 | AT1G61490.3 | 32.870 | 216 | 137 | 3 | 153 | 368 | 1 | 208 | 3.39e-29 | 119 |
| Msa1055950 | AT3G16030.1 | 32.669 | 251 | 146 | 7 | 9 | 241 | 6 | 251 | 2.08e-28 | 117 |
| Msa1055950 | AT3G16030.7 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 3.03e-27 | 114 |
| Msa1055950 | AT3G16030.3 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 3.05e-27 | 113 |
| Msa1055950 | AT3G16030.8 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 3.05e-27 | 113 |
| Msa1055950 | AT3G16030.5 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 3.05e-27 | 113 |
| Msa1055950 | AT3G16030.4 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 3.67e-27 | 113 |
| Msa1055950 | AT3G16030.6 | 30.916 | 262 | 147 | 7 | 9 | 241 | 6 | 262 | 6.08e-27 | 113 |
| Msa1055950 | AT5G18470.1 | 29.245 | 318 | 188 | 11 | 28 | 318 | 31 | 338 | 6.46e-27 | 110 |
| Msa1055950 | AT4G11900.8 | 28.358 | 335 | 182 | 16 | 66 | 363 | 1 | 314 | 3.35e-25 | 107 |
| Msa1055950 | AT4G11900.9 | 28.358 | 335 | 182 | 16 | 66 | 363 | 1 | 314 | 3.37e-25 | 107 |
| Msa1055950 | AT5G24080.2 | 28.242 | 347 | 182 | 18 | 13 | 314 | 13 | 337 | 1.03e-19 | 91.3 |
| Msa1055950 | AT4G03230.2 | 28.689 | 244 | 155 | 9 | 129 | 365 | 31 | 262 | 7.76e-17 | 82.8 |
| Msa1055950 | AT4G03230.6 | 28.689 | 244 | 155 | 9 | 129 | 365 | 31 | 262 | 7.76e-17 | 82.8 |
| Msa1055950 | AT2G41890.1 | 27.273 | 297 | 182 | 12 | 33 | 311 | 30 | 310 | 7.49e-16 | 79.7 |
| Msa1055950 | AT4G03230.3 | 28.986 | 207 | 131 | 6 | 164 | 365 | 2 | 197 | 3.59e-15 | 77.4 |
| Msa1055950 | AT4G03230.7 | 28.986 | 207 | 131 | 6 | 164 | 365 | 10 | 205 | 3.60e-15 | 77.4 |
| Msa1055950 | AT5G39370.1 | 35.897 | 117 | 69 | 3 | 74 | 185 | 10 | 125 | 4.57e-14 | 68.9 |
| Msa1055950 | AT1G78850.1 | 25.287 | 261 | 166 | 9 | 75 | 315 | 90 | 341 | 1.55e-12 | 68.9 |
| Msa1055950 | AT1G78860.1 | 30.928 | 194 | 119 | 9 | 48 | 237 | 59 | 241 | 7.09e-12 | 67.0 |
| Msa1055950 | AT1G34300.1 | 24.252 | 301 | 173 | 11 | 54 | 338 | 53 | 314 | 3.71e-11 | 65.1 |
Find 86 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAACACTTCAATTATATT+TGG | 0.100741 | 7_2:-32289794 | None:intergenic |
| GGAAATCTTATTGTATTAAA+TGG | 0.171182 | 7_2:+32289503 | Msa1055950:CDS |
| CAAACCGCTACGTTGGAATT+TGG | 0.204035 | 7_2:+32289393 | Msa1055950:CDS |
| CTTCGGTAACCTTGTCCTTT+TGG | 0.218759 | 7_2:+32289595 | Msa1055950:CDS |
| TCTTTGGAGATTAGAGTTTC+AGG | 0.229454 | 7_2:-32289329 | None:intergenic |
| TGAACACTTCAATTATATTT+GGG | 0.254773 | 7_2:-32289793 | None:intergenic |
| AAAGGTGAAGTTACCGTCTT+TGG | 0.255629 | 7_2:-32289345 | None:intergenic |
| AGTGAAGACCTCGCCGTTCC+AGG | 0.282586 | 7_2:-32289852 | None:intergenic |
| TTCCATTGTTCTATGTTTCT+CGG | 0.312820 | 7_2:-32290163 | None:intergenic |
| CAACCACTGAATGATTCTAA+TGG | 0.336037 | 7_2:+32289458 | Msa1055950:CDS |
| ATATAATTGAAGTGTTCATT+TGG | 0.339108 | 7_2:+32289798 | Msa1055950:CDS |
| AACAATGGAATATACGTAAC+TGG | 0.371858 | 7_2:+32290176 | Msa1055950:CDS |
| AGTCTCAATCTACAATCATA+TGG | 0.379675 | 7_2:+32289420 | Msa1055950:CDS |
| AGGAAGAAATGCAAGTTCTA+TGG | 0.382610 | 7_2:+32290038 | Msa1055950:CDS |
| AGTCAAACCTCAGCAAAATC+TGG | 0.387909 | 7_2:-32290304 | None:intergenic |
| AAAGACGGTAACTTCACCTT+TGG | 0.402111 | 7_2:+32289347 | Msa1055950:CDS |
| AAAGGAGAATTAGAAGAAAC+GGG | 0.405231 | 7_2:+32290001 | Msa1055950:CDS |
| AACCACTGAATGATTCTAAT+GGG | 0.417556 | 7_2:+32289459 | Msa1055950:CDS |
| CGAGGAGGAGATGATGGAGA+AGG | 0.431493 | 7_2:+32289914 | Msa1055950:CDS |
| ATCTATAACCTAAATTCAAA+AGG | 0.433793 | 7_2:+32289983 | Msa1055950:CDS |
| AAACATCACACTCTGATTCC+CGG | 0.436536 | 7_2:-32290066 | None:intergenic |
| AAAAGGAGAATTAGAAGAAA+CGG | 0.440179 | 7_2:+32290000 | Msa1055950:CDS |
| CTTTGGAGATTAGAGTTTCA+GGG | 0.446467 | 7_2:-32289328 | None:intergenic |
| GGAATGGAAGTCGACCATAT+TGG | 0.453445 | 7_2:+32289819 | Msa1055950:CDS |
| ACTTGTATTTGTTGCTATGT+TGG | 0.457852 | 7_2:-32289558 | None:intergenic |
| GACACCTTTGCAGTGTGAAA+TGG | 0.467046 | 7_2:+32290219 | Msa1055950:CDS |
| ATTGAAGTGTTCATTTGGAA+TGG | 0.468292 | 7_2:+32289803 | Msa1055950:CDS |
| ATGGACAGAAACGAGTCGTT+TGG | 0.475397 | 7_2:+32289522 | Msa1055950:CDS |
| TGCAAGTTCTATGGACAAGC+CGG | 0.481798 | 7_2:+32290047 | Msa1055950:CDS |
| CAGGGTCCACTTCGCCAATA+TGG | 0.495763 | 7_2:-32289833 | None:intergenic |
| AGAGTGTAAATCTCGAATCA+TGG | 0.496724 | 7_2:+32289714 | Msa1055950:CDS |
| CCCGTCTTCCTTTCTACTGG+TGG | 0.502503 | 7_2:-32290254 | None:intergenic |
| TGGAACGGCGAGGTCTTCAC+TGG | 0.504183 | 7_2:+32289854 | Msa1055950:CDS |
| CATTAGAATCATTCAGTGGT+TGG | 0.505456 | 7_2:-32289457 | None:intergenic |
| GTGAAGACCTCGCCGTTCCA+GGG | 0.505609 | 7_2:-32289851 | None:intergenic |
| CACATCATCTCGATTTATCA+AGG | 0.506622 | 7_2:+32289304 | Msa1055950:CDS |
| GAGGAGGAGATGATGGAGAA+GGG | 0.508402 | 7_2:+32289915 | Msa1055950:CDS |
| TGTTGCTATTTGCTACATGT+TGG | 0.511657 | 7_2:+32289263 | Msa1055950:CDS |
| GTCTCAATCTACAATCATAT+GGG | 0.512601 | 7_2:+32289421 | Msa1055950:CDS |
| TTCCAGTTGTAATCTCCAAA+AGG | 0.520777 | 7_2:-32289610 | None:intergenic |
| AAACCCGTCTTCCTTTCTAC+TGG | 0.521752 | 7_2:-32290257 | None:intergenic |
| ACCGCTACGTTGGAATTTGG+TGG | 0.522039 | 7_2:+32289396 | Msa1055950:CDS |
| CAATAAAACCACCAGTAGAA+AGG | 0.525216 | 7_2:+32290246 | Msa1055950:CDS |
| CATATTGGCGAAGTGGACCC+TGG | 0.534112 | 7_2:+32289834 | Msa1055950:CDS |
| CTATAGAAATTGCCAACAGA+TGG | 0.536969 | 7_2:-32289752 | None:intergenic |
| ACTGTCACAGTAACTGAAGA+TGG | 0.537839 | 7_2:+32289482 | Msa1055950:CDS |
| TTGCCAACAGATGGGTCAGA+AGG | 0.540385 | 7_2:-32289743 | None:intergenic |
| AACGGGGTGGGATGATGAGA+AGG | 0.544370 | 7_2:+32290018 | Msa1055950:CDS |
| AGCCCTTCTGACCCATCTGT+TGG | 0.550086 | 7_2:+32289740 | Msa1055950:CDS |
| AACACTTCAATTATATTTGG+GGG | 0.554019 | 7_2:-32289791 | None:intergenic |
| GAACACTTCAATTATATTTG+GGG | 0.560442 | 7_2:-32289792 | None:intergenic |
| GCAAGTTCTATGGACAAGCC+GGG | 0.566091 | 7_2:+32290048 | Msa1055950:CDS |
| CTAGGCAGTAATGTATCTGT+AGG | 0.566206 | 7_2:-32289659 | None:intergenic |
| CCAACATGTAGCTGTTTGAG+AGG | 0.566815 | 7_2:+32290133 | Msa1055950:CDS |
| TTGATTGAAAGCTTCATGCT+AGG | 0.569190 | 7_2:-32289677 | None:intergenic |
| TGTGATGTTTACGATATATG+TGG | 0.577885 | 7_2:+32290079 | Msa1055950:CDS |
| AATTCTACAAACCGCTACGT+TGG | 0.582122 | 7_2:+32289386 | Msa1055950:CDS |
| TTGACCATTTCACACTGCAA+AGG | 0.582700 | 7_2:-32290223 | None:intergenic |
| TGCCAACAGATGGGTCAGAA+GGG | 0.585187 | 7_2:-32289742 | None:intergenic |
| TTTAGGGCTAAAGAATCCAA+AGG | 0.590713 | 7_2:-32289363 | None:intergenic |
| TGTCCTTCGAACACACCCAC+CGG | 0.590891 | 7_2:-32290200 | None:intergenic |
| CAACATGTAGCTGTTTGAGA+GGG | 0.595166 | 7_2:+32290134 | Msa1055950:CDS |
| TATAGAAATTGCCAACAGAT+GGG | 0.596696 | 7_2:-32289751 | None:intergenic |
| TGGCGAAGTGGACCCTGGAA+CGG | 0.604181 | 7_2:+32289839 | Msa1055950:CDS |
| GGACCGGTGGGTGTGTTCGA+AGG | 0.605786 | 7_2:+32290197 | Msa1055950:CDS |
| TGGAATATACGTAACTGGAC+CGG | 0.608641 | 7_2:+32290181 | Msa1055950:CDS |
| CCACCAGTAGAAAGGAAGAC+GGG | 0.610274 | 7_2:+32290254 | Msa1055950:CDS |
| AATATACGTAACTGGACCGG+TGG | 0.610445 | 7_2:+32290184 | Msa1055950:CDS |
| AGAATTAGAAGAAACGGGGT+GGG | 0.618227 | 7_2:+32290006 | Msa1055950:CDS |
| CCTCTCAAACAGCTACATGT+TGG | 0.620111 | 7_2:-32290133 | None:intergenic |
| GAAACTCTAATCTCCAAAGA+CGG | 0.623420 | 7_2:+32289332 | Msa1055950:CDS |
| GTGATGTTTACGATATATGT+GGG | 0.623987 | 7_2:+32290080 | Msa1055950:CDS |
| ACACTTCAATTATATTTGGG+GGG | 0.627739 | 7_2:-32289790 | None:intergenic |
| TATTTGCTACATGTTGGTGT+CGG | 0.629759 | 7_2:+32289269 | Msa1055950:CDS |
| TCCACCAAATTCCAACGTAG+CGG | 0.633401 | 7_2:-32289397 | None:intergenic |
| ACCACCAGTAGAAAGGAAGA+CGG | 0.633544 | 7_2:+32290253 | Msa1055950:CDS |
| AGTCGACCATATTGGCGAAG+TGG | 0.635984 | 7_2:+32289827 | Msa1055950:CDS |
| GAGAATTAGAAGAAACGGGG+TGG | 0.638781 | 7_2:+32290005 | Msa1055950:CDS |
| AACCGAGAAACATAGAACAA+TGG | 0.642165 | 7_2:+32290161 | Msa1055950:CDS |
| GTCCCATTAGAATCATTCAG+TGG | 0.655199 | 7_2:-32289461 | None:intergenic |
| TTGTAATCTCCAAAAGGACA+AGG | 0.657807 | 7_2:-32289604 | None:intergenic |
| GATAAATCGAGATGATGTGA+TGG | 0.677104 | 7_2:-32289300 | None:intergenic |
| ATATACGTAACTGGACCGGT+GGG | 0.685241 | 7_2:+32290185 | Msa1055950:CDS |
| AAGTGGACCCTGGAACGGCG+AGG | 0.687521 | 7_2:+32289844 | Msa1055950:CDS |
| TGATGTTTACGATATATGTG+GGG | 0.765676 | 7_2:+32290081 | Msa1055950:CDS |
| AAGGAGAATTAGAAGAAACG+GGG | 0.774873 | 7_2:+32290002 | Msa1055950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATAGATTCATATTTTTT+TGG | + | chr7_2:32289887-32289906 | Msa1055950:CDS | 15.0% |
| !!! | ATGATAGATTCATATTTTTT+TGG | + | chr7_2:32289887-32289906 | Msa1055950:CDS | 15.0% |
| !! | GGAAATCTTATTGTATTAAA+TGG | + | chr7_2:32289503-32289522 | Msa1055950:CDS | 20.0% |
| !! | TGAACACTTCAATTATATTT+GGG | - | chr7_2:32289796-32289815 | None:intergenic | 20.0% |
| !! | ATGAACACTTCAATTATATT+TGG | - | chr7_2:32289797-32289816 | None:intergenic | 20.0% |
| !!! | ATATAATTGAAGTGTTCATT+TGG | + | chr7_2:32289798-32289817 | Msa1055950:CDS | 20.0% |
| !! | ATCTATAACCTAAATTCAAA+AGG | + | chr7_2:32289983-32290002 | Msa1055950:CDS | 20.0% |
| !! | GGAAATCTTATTGTATTAAA+TGG | + | chr7_2:32289503-32289522 | Msa1055950:CDS | 20.0% |
| !! | TGAACACTTCAATTATATTT+GGG | - | chr7_2:32289796-32289815 | None:intergenic | 20.0% |
| !! | ATGAACACTTCAATTATATT+TGG | - | chr7_2:32289797-32289816 | None:intergenic | 20.0% |
| !!! | ATATAATTGAAGTGTTCATT+TGG | + | chr7_2:32289798-32289817 | Msa1055950:CDS | 20.0% |
| !! | ATCTATAACCTAAATTCAAA+AGG | + | chr7_2:32289983-32290002 | Msa1055950:CDS | 20.0% |
| !! | AAATACAAGTTCTCAGTTTT+CGG | + | chr7_2:32289571-32289590 | Msa1055950:CDS | 25.0% |
| !! | TTACAACTGGAAACATTTTA+TGG | + | chr7_2:32289621-32289640 | Msa1055950:CDS | 25.0% |
| ! | AACACTTCAATTATATTTGG+GGG | - | chr7_2:32289794-32289813 | None:intergenic | 25.0% |
| ! | GAACACTTCAATTATATTTG+GGG | - | chr7_2:32289795-32289814 | None:intergenic | 25.0% |
| !!! | TCATATTTTTTTGGTTTTCG+AGG | + | chr7_2:32289896-32289915 | Msa1055950:CDS | 25.0% |
| !! | CTAATTCTCCTTTTGAATTT+AGG | - | chr7_2:32289994-32290013 | None:intergenic | 25.0% |
| ! | AAAAGGAGAATTAGAAGAAA+CGG | + | chr7_2:32290000-32290019 | Msa1055950:CDS | 25.0% |
| !! | AAATACAAGTTCTCAGTTTT+CGG | + | chr7_2:32289571-32289590 | Msa1055950:CDS | 25.0% |
| !! | TTACAACTGGAAACATTTTA+TGG | + | chr7_2:32289621-32289640 | Msa1055950:CDS | 25.0% |
| ! | AACACTTCAATTATATTTGG+GGG | - | chr7_2:32289794-32289813 | None:intergenic | 25.0% |
| ! | GAACACTTCAATTATATTTG+GGG | - | chr7_2:32289795-32289814 | None:intergenic | 25.0% |
| !!! | TCATATTTTTTTGGTTTTCG+AGG | + | chr7_2:32289896-32289915 | Msa1055950:CDS | 25.0% |
| !! | CTAATTCTCCTTTTGAATTT+AGG | - | chr7_2:32289994-32290013 | None:intergenic | 25.0% |
| ! | AAAAGGAGAATTAGAAGAAA+CGG | + | chr7_2:32290000-32290019 | Msa1055950:CDS | 25.0% |
| ! | AGCGGTTTGTAGAATTTTTA+GGG | - | chr7_2:32289382-32289401 | None:intergenic | 30.0% |
| ! | TAGCGGTTTGTAGAATTTTT+AGG | - | chr7_2:32289383-32289402 | None:intergenic | 30.0% |
| AGTCTCAATCTACAATCATA+TGG | + | chr7_2:32289420-32289439 | Msa1055950:CDS | 30.0% | |
| GTCTCAATCTACAATCATAT+GGG | + | chr7_2:32289421-32289440 | Msa1055950:CDS | 30.0% | |
| AACCACTGAATGATTCTAAT+GGG | + | chr7_2:32289459-32289478 | Msa1055950:CDS | 30.0% | |
| ! | ACTTGTATTTGTTGCTATGT+TGG | - | chr7_2:32289561-32289580 | None:intergenic | 30.0% |
| TATAGAAATTGCCAACAGAT+GGG | - | chr7_2:32289754-32289773 | None:intergenic | 30.0% | |
| ACACTTCAATTATATTTGGG+GGG | - | chr7_2:32289793-32289812 | None:intergenic | 30.0% | |
| ! | ATTGAAGTGTTCATTTGGAA+TGG | + | chr7_2:32289803-32289822 | Msa1055950:CDS | 30.0% |
| !!! | TATTTTTTTGGTTTTCGAGG+AGG | + | chr7_2:32289899-32289918 | Msa1055950:CDS | 30.0% |
| AAAGGAGAATTAGAAGAAAC+GGG | + | chr7_2:32290001-32290020 | Msa1055950:CDS | 30.0% | |
| TGTGATGTTTACGATATATG+TGG | + | chr7_2:32290079-32290098 | Msa1055950:CDS | 30.0% | |
| GTGATGTTTACGATATATGT+GGG | + | chr7_2:32290080-32290099 | Msa1055950:CDS | 30.0% | |
| TGATGTTTACGATATATGTG+GGG | + | chr7_2:32290081-32290100 | Msa1055950:CDS | 30.0% | |
| TTCCATTGTTCTATGTTTCT+CGG | - | chr7_2:32290166-32290185 | None:intergenic | 30.0% | |
| AACAATGGAATATACGTAAC+TGG | + | chr7_2:32290176-32290195 | Msa1055950:CDS | 30.0% | |
| ! | AGCGGTTTGTAGAATTTTTA+GGG | - | chr7_2:32289382-32289401 | None:intergenic | 30.0% |
| ! | TAGCGGTTTGTAGAATTTTT+AGG | - | chr7_2:32289383-32289402 | None:intergenic | 30.0% |
| AGTCTCAATCTACAATCATA+TGG | + | chr7_2:32289420-32289439 | Msa1055950:CDS | 30.0% | |
| GTCTCAATCTACAATCATAT+GGG | + | chr7_2:32289421-32289440 | Msa1055950:CDS | 30.0% | |
| AACCACTGAATGATTCTAAT+GGG | + | chr7_2:32289459-32289478 | Msa1055950:CDS | 30.0% | |
| ! | ACTTGTATTTGTTGCTATGT+TGG | - | chr7_2:32289561-32289580 | None:intergenic | 30.0% |
| TATAGAAATTGCCAACAGAT+GGG | - | chr7_2:32289754-32289773 | None:intergenic | 30.0% | |
| ACACTTCAATTATATTTGGG+GGG | - | chr7_2:32289793-32289812 | None:intergenic | 30.0% | |
| ! | ATTGAAGTGTTCATTTGGAA+TGG | + | chr7_2:32289803-32289822 | Msa1055950:CDS | 30.0% |
| !!! | TATTTTTTTGGTTTTCGAGG+AGG | + | chr7_2:32289899-32289918 | Msa1055950:CDS | 30.0% |
| AAAGGAGAATTAGAAGAAAC+GGG | + | chr7_2:32290001-32290020 | Msa1055950:CDS | 30.0% | |
| TGTGATGTTTACGATATATG+TGG | + | chr7_2:32290079-32290098 | Msa1055950:CDS | 30.0% | |
| GTGATGTTTACGATATATGT+GGG | + | chr7_2:32290080-32290099 | Msa1055950:CDS | 30.0% | |
| TGATGTTTACGATATATGTG+GGG | + | chr7_2:32290081-32290100 | Msa1055950:CDS | 30.0% | |
| TTCCATTGTTCTATGTTTCT+CGG | - | chr7_2:32290166-32290185 | None:intergenic | 30.0% | |
| AACAATGGAATATACGTAAC+TGG | + | chr7_2:32290176-32290195 | Msa1055950:CDS | 30.0% | |
| !! | TGTTGCTATTTGCTACATGT+TGG | + | chr7_2:32289263-32289282 | Msa1055950:CDS | 35.0% |
| ! | TATTTGCTACATGTTGGTGT+CGG | + | chr7_2:32289269-32289288 | Msa1055950:CDS | 35.0% |
| GATAAATCGAGATGATGTGA+TGG | - | chr7_2:32289303-32289322 | None:intergenic | 35.0% | |
| CACATCATCTCGATTTATCA+AGG | + | chr7_2:32289304-32289323 | Msa1055950:CDS | 35.0% | |
| ! | CTTTGGAGATTAGAGTTTCA+GGG | - | chr7_2:32289331-32289350 | None:intergenic | 35.0% |
| ! | TCTTTGGAGATTAGAGTTTC+AGG | - | chr7_2:32289332-32289351 | None:intergenic | 35.0% |
| GAAACTCTAATCTCCAAAGA+CGG | + | chr7_2:32289332-32289351 | Msa1055950:CDS | 35.0% | |
| ! | TTTAGGGCTAAAGAATCCAA+AGG | - | chr7_2:32289366-32289385 | None:intergenic | 35.0% |
| CATTAGAATCATTCAGTGGT+TGG | - | chr7_2:32289460-32289479 | None:intergenic | 35.0% | |
| CAACCACTGAATGATTCTAA+TGG | + | chr7_2:32289458-32289477 | Msa1055950:CDS | 35.0% | |
| TTGTAATCTCCAAAAGGACA+AGG | - | chr7_2:32289607-32289626 | None:intergenic | 35.0% | |
| TTCCAGTTGTAATCTCCAAA+AGG | - | chr7_2:32289613-32289632 | None:intergenic | 35.0% | |
| TTGATTGAAAGCTTCATGCT+AGG | - | chr7_2:32289680-32289699 | None:intergenic | 35.0% | |
| AGAGTGTAAATCTCGAATCA+TGG | + | chr7_2:32289714-32289733 | Msa1055950:CDS | 35.0% | |
| CTATAGAAATTGCCAACAGA+TGG | - | chr7_2:32289755-32289774 | None:intergenic | 35.0% | |
| AAGGAGAATTAGAAGAAACG+GGG | + | chr7_2:32290002-32290021 | Msa1055950:CDS | 35.0% | |
| AGGAAGAAATGCAAGTTCTA+TGG | + | chr7_2:32290038-32290057 | Msa1055950:CDS | 35.0% | |
| AACCGAGAAACATAGAACAA+TGG | + | chr7_2:32290161-32290180 | Msa1055950:CDS | 35.0% | |
| CAATAAAACCACCAGTAGAA+AGG | + | chr7_2:32290246-32290265 | Msa1055950:CDS | 35.0% | |
| ! | TAAAGTTCCAGATTTTGCTG+AGG | + | chr7_2:32290297-32290316 | Msa1055950:CDS | 35.0% |
| !! | TGTTGCTATTTGCTACATGT+TGG | + | chr7_2:32289263-32289282 | Msa1055950:CDS | 35.0% |
| ! | TATTTGCTACATGTTGGTGT+CGG | + | chr7_2:32289269-32289288 | Msa1055950:CDS | 35.0% |
| GATAAATCGAGATGATGTGA+TGG | - | chr7_2:32289303-32289322 | None:intergenic | 35.0% | |
| CACATCATCTCGATTTATCA+AGG | + | chr7_2:32289304-32289323 | Msa1055950:CDS | 35.0% | |
| ! | CTTTGGAGATTAGAGTTTCA+GGG | - | chr7_2:32289331-32289350 | None:intergenic | 35.0% |
| ! | TCTTTGGAGATTAGAGTTTC+AGG | - | chr7_2:32289332-32289351 | None:intergenic | 35.0% |
| GAAACTCTAATCTCCAAAGA+CGG | + | chr7_2:32289332-32289351 | Msa1055950:CDS | 35.0% | |
| ! | TTTAGGGCTAAAGAATCCAA+AGG | - | chr7_2:32289366-32289385 | None:intergenic | 35.0% |
| CATTAGAATCATTCAGTGGT+TGG | - | chr7_2:32289460-32289479 | None:intergenic | 35.0% | |
| CAACCACTGAATGATTCTAA+TGG | + | chr7_2:32289458-32289477 | Msa1055950:CDS | 35.0% | |
| TTGTAATCTCCAAAAGGACA+AGG | - | chr7_2:32289607-32289626 | None:intergenic | 35.0% | |
| TTCCAGTTGTAATCTCCAAA+AGG | - | chr7_2:32289613-32289632 | None:intergenic | 35.0% | |
| TTGATTGAAAGCTTCATGCT+AGG | - | chr7_2:32289680-32289699 | None:intergenic | 35.0% | |
| AGAGTGTAAATCTCGAATCA+TGG | + | chr7_2:32289714-32289733 | Msa1055950:CDS | 35.0% | |
| CTATAGAAATTGCCAACAGA+TGG | - | chr7_2:32289755-32289774 | None:intergenic | 35.0% | |
| AAGGAGAATTAGAAGAAACG+GGG | + | chr7_2:32290002-32290021 | Msa1055950:CDS | 35.0% | |
| AGGAAGAAATGCAAGTTCTA+TGG | + | chr7_2:32290038-32290057 | Msa1055950:CDS | 35.0% | |
| AACCGAGAAACATAGAACAA+TGG | + | chr7_2:32290161-32290180 | Msa1055950:CDS | 35.0% | |
| CAATAAAACCACCAGTAGAA+AGG | + | chr7_2:32290246-32290265 | Msa1055950:CDS | 35.0% | |
| ! | TAAAGTTCCAGATTTTGCTG+AGG | + | chr7_2:32290297-32290316 | Msa1055950:CDS | 35.0% |
| AAAGGTGAAGTTACCGTCTT+TGG | - | chr7_2:32289348-32289367 | None:intergenic | 40.0% | |
| AAAGACGGTAACTTCACCTT+TGG | + | chr7_2:32289347-32289366 | Msa1055950:CDS | 40.0% | |
| AATTCTACAAACCGCTACGT+TGG | + | chr7_2:32289386-32289405 | Msa1055950:CDS | 40.0% | |
| GTCCCATTAGAATCATTCAG+TGG | - | chr7_2:32289464-32289483 | None:intergenic | 40.0% | |
| ACTGTCACAGTAACTGAAGA+TGG | + | chr7_2:32289482-32289501 | Msa1055950:CDS | 40.0% | |
| ! | AGTTCTCAGTTTTCGGACTT+CGG | + | chr7_2:32289578-32289597 | Msa1055950:CDS | 40.0% |
| !! | GTCCTTTTGGAGATTACAAC+TGG | + | chr7_2:32289608-32289627 | Msa1055950:CDS | 40.0% |
| CTAGGCAGTAATGTATCTGT+AGG | - | chr7_2:32289662-32289681 | None:intergenic | 40.0% | |
| AGAATTAGAAGAAACGGGGT+GGG | + | chr7_2:32290006-32290025 | Msa1055950:CDS | 40.0% | |
| AAACATCACACTCTGATTCC+CGG | - | chr7_2:32290069-32290088 | None:intergenic | 40.0% | |
| CAACATGTAGCTGTTTGAGA+GGG | + | chr7_2:32290134-32290153 | Msa1055950:CDS | 40.0% | |
| TGGAATATACGTAACTGGAC+CGG | + | chr7_2:32290181-32290200 | Msa1055950:CDS | 40.0% | |
| TTGACCATTTCACACTGCAA+AGG | - | chr7_2:32290226-32290245 | None:intergenic | 40.0% | |
| AAAGGTGAAGTTACCGTCTT+TGG | - | chr7_2:32289348-32289367 | None:intergenic | 40.0% | |
| AAAGACGGTAACTTCACCTT+TGG | + | chr7_2:32289347-32289366 | Msa1055950:CDS | 40.0% | |
| AATTCTACAAACCGCTACGT+TGG | + | chr7_2:32289386-32289405 | Msa1055950:CDS | 40.0% | |
| GTCCCATTAGAATCATTCAG+TGG | - | chr7_2:32289464-32289483 | None:intergenic | 40.0% | |
| ACTGTCACAGTAACTGAAGA+TGG | + | chr7_2:32289482-32289501 | Msa1055950:CDS | 40.0% | |
| ! | AGTTCTCAGTTTTCGGACTT+CGG | + | chr7_2:32289578-32289597 | Msa1055950:CDS | 40.0% |
| !! | GTCCTTTTGGAGATTACAAC+TGG | + | chr7_2:32289608-32289627 | Msa1055950:CDS | 40.0% |
| CTAGGCAGTAATGTATCTGT+AGG | - | chr7_2:32289662-32289681 | None:intergenic | 40.0% | |
| AGAATTAGAAGAAACGGGGT+GGG | + | chr7_2:32290006-32290025 | Msa1055950:CDS | 40.0% | |
| AAACATCACACTCTGATTCC+CGG | - | chr7_2:32290069-32290088 | None:intergenic | 40.0% | |
| CAACATGTAGCTGTTTGAGA+GGG | + | chr7_2:32290134-32290153 | Msa1055950:CDS | 40.0% | |
| TGGAATATACGTAACTGGAC+CGG | + | chr7_2:32290181-32290200 | Msa1055950:CDS | 40.0% | |
| TTGACCATTTCACACTGCAA+AGG | - | chr7_2:32290226-32290245 | None:intergenic | 40.0% | |
| CAAACCGCTACGTTGGAATT+TGG | + | chr7_2:32289393-32289412 | Msa1055950:CDS | 45.0% | |
| TCCACCAAATTCCAACGTAG+CGG | - | chr7_2:32289400-32289419 | None:intergenic | 45.0% | |
| ATGGACAGAAACGAGTCGTT+TGG | + | chr7_2:32289522-32289541 | Msa1055950:CDS | 45.0% | |
| ! | CTTCGGTAACCTTGTCCTTT+TGG | + | chr7_2:32289595-32289614 | Msa1055950:CDS | 45.0% |
| GGAATGGAAGTCGACCATAT+TGG | + | chr7_2:32289819-32289838 | Msa1055950:CDS | 45.0% | |
| GAGAATTAGAAGAAACGGGG+TGG | + | chr7_2:32290005-32290024 | Msa1055950:CDS | 45.0% | |
| TGCAAGTTCTATGGACAAGC+CGG | + | chr7_2:32290047-32290066 | Msa1055950:CDS | 45.0% | |
| CCTCTCAAACAGCTACATGT+TGG | - | chr7_2:32290136-32290155 | None:intergenic | 45.0% | |
| CCAACATGTAGCTGTTTGAG+AGG | + | chr7_2:32290133-32290152 | Msa1055950:CDS | 45.0% | |
| AATATACGTAACTGGACCGG+TGG | + | chr7_2:32290184-32290203 | Msa1055950:CDS | 45.0% | |
| ATATACGTAACTGGACCGGT+GGG | + | chr7_2:32290185-32290204 | Msa1055950:CDS | 45.0% | |
| GACACCTTTGCAGTGTGAAA+TGG | + | chr7_2:32290219-32290238 | Msa1055950:CDS | 45.0% | |
| ACCACCAGTAGAAAGGAAGA+CGG | + | chr7_2:32290253-32290272 | Msa1055950:CDS | 45.0% | |
| AAACCCGTCTTCCTTTCTAC+TGG | - | chr7_2:32290260-32290279 | None:intergenic | 45.0% | |
| CAAACCGCTACGTTGGAATT+TGG | + | chr7_2:32289393-32289412 | Msa1055950:CDS | 45.0% | |
| TCCACCAAATTCCAACGTAG+CGG | - | chr7_2:32289400-32289419 | None:intergenic | 45.0% | |
| ATGGACAGAAACGAGTCGTT+TGG | + | chr7_2:32289522-32289541 | Msa1055950:CDS | 45.0% | |
| ! | CTTCGGTAACCTTGTCCTTT+TGG | + | chr7_2:32289595-32289614 | Msa1055950:CDS | 45.0% |
| GGAATGGAAGTCGACCATAT+TGG | + | chr7_2:32289819-32289838 | Msa1055950:CDS | 45.0% | |
| GAGAATTAGAAGAAACGGGG+TGG | + | chr7_2:32290005-32290024 | Msa1055950:CDS | 45.0% | |
| TGCAAGTTCTATGGACAAGC+CGG | + | chr7_2:32290047-32290066 | Msa1055950:CDS | 45.0% | |
| CCTCTCAAACAGCTACATGT+TGG | - | chr7_2:32290136-32290155 | None:intergenic | 45.0% | |
| CCAACATGTAGCTGTTTGAG+AGG | + | chr7_2:32290133-32290152 | Msa1055950:CDS | 45.0% | |
| AATATACGTAACTGGACCGG+TGG | + | chr7_2:32290184-32290203 | Msa1055950:CDS | 45.0% | |
| ATATACGTAACTGGACCGGT+GGG | + | chr7_2:32290185-32290204 | Msa1055950:CDS | 45.0% | |
| GACACCTTTGCAGTGTGAAA+TGG | + | chr7_2:32290219-32290238 | Msa1055950:CDS | 45.0% | |
| ACCACCAGTAGAAAGGAAGA+CGG | + | chr7_2:32290253-32290272 | Msa1055950:CDS | 45.0% | |
| AAACCCGTCTTCCTTTCTAC+TGG | - | chr7_2:32290260-32290279 | None:intergenic | 45.0% | |
| ACCGCTACGTTGGAATTTGG+TGG | + | chr7_2:32289396-32289415 | Msa1055950:CDS | 50.0% | |
| TGCCAACAGATGGGTCAGAA+GGG | - | chr7_2:32289745-32289764 | None:intergenic | 50.0% | |
| TTGCCAACAGATGGGTCAGA+AGG | - | chr7_2:32289746-32289765 | None:intergenic | 50.0% | |
| AGTCGACCATATTGGCGAAG+TGG | + | chr7_2:32289827-32289846 | Msa1055950:CDS | 50.0% | |
| !! | GGTTTTCGAGGAGGAGATGA+TGG | + | chr7_2:32289908-32289927 | Msa1055950:CDS | 50.0% |
| !! | GAGGAGGAGATGATGGAGAA+GGG | + | chr7_2:32289915-32289934 | Msa1055950:CDS | 50.0% |
| GCAAGTTCTATGGACAAGCC+GGG | + | chr7_2:32290048-32290067 | Msa1055950:CDS | 50.0% | |
| CCACCAGTAGAAAGGAAGAC+GGG | + | chr7_2:32290254-32290273 | Msa1055950:CDS | 50.0% | |
| ACCGCTACGTTGGAATTTGG+TGG | + | chr7_2:32289396-32289415 | Msa1055950:CDS | 50.0% | |
| TGCCAACAGATGGGTCAGAA+GGG | - | chr7_2:32289745-32289764 | None:intergenic | 50.0% | |
| TTGCCAACAGATGGGTCAGA+AGG | - | chr7_2:32289746-32289765 | None:intergenic | 50.0% | |
| AGTCGACCATATTGGCGAAG+TGG | + | chr7_2:32289827-32289846 | Msa1055950:CDS | 50.0% | |
| !! | GGTTTTCGAGGAGGAGATGA+TGG | + | chr7_2:32289908-32289927 | Msa1055950:CDS | 50.0% |
| !! | GAGGAGGAGATGATGGAGAA+GGG | + | chr7_2:32289915-32289934 | Msa1055950:CDS | 50.0% |
| GCAAGTTCTATGGACAAGCC+GGG | + | chr7_2:32290048-32290067 | Msa1055950:CDS | 50.0% | |
| CCACCAGTAGAAAGGAAGAC+GGG | + | chr7_2:32290254-32290273 | Msa1055950:CDS | 50.0% | |
| AGCCCTTCTGACCCATCTGT+TGG | + | chr7_2:32289740-32289759 | Msa1055950:CDS | 55.0% | |
| CAGGGTCCACTTCGCCAATA+TGG | - | chr7_2:32289836-32289855 | None:intergenic | 55.0% | |
| CATATTGGCGAAGTGGACCC+TGG | + | chr7_2:32289834-32289853 | Msa1055950:CDS | 55.0% | |
| !! | CGAGGAGGAGATGATGGAGA+AGG | + | chr7_2:32289914-32289933 | Msa1055950:CDS | 55.0% |
| AACGGGGTGGGATGATGAGA+AGG | + | chr7_2:32290018-32290037 | Msa1055950:CDS | 55.0% | |
| TGTCCTTCGAACACACCCAC+CGG | - | chr7_2:32290203-32290222 | None:intergenic | 55.0% | |
| CCCGTCTTCCTTTCTACTGG+TGG | - | chr7_2:32290257-32290276 | None:intergenic | 55.0% | |
| AGCCCTTCTGACCCATCTGT+TGG | + | chr7_2:32289740-32289759 | Msa1055950:CDS | 55.0% | |
| CAGGGTCCACTTCGCCAATA+TGG | - | chr7_2:32289836-32289855 | None:intergenic | 55.0% | |
| CATATTGGCGAAGTGGACCC+TGG | + | chr7_2:32289834-32289853 | Msa1055950:CDS | 55.0% | |
| !! | CGAGGAGGAGATGATGGAGA+AGG | + | chr7_2:32289914-32289933 | Msa1055950:CDS | 55.0% |
| AACGGGGTGGGATGATGAGA+AGG | + | chr7_2:32290018-32290037 | Msa1055950:CDS | 55.0% | |
| TGTCCTTCGAACACACCCAC+CGG | - | chr7_2:32290203-32290222 | None:intergenic | 55.0% | |
| CCCGTCTTCCTTTCTACTGG+TGG | - | chr7_2:32290257-32290276 | None:intergenic | 55.0% | |
| TGGCGAAGTGGACCCTGGAA+CGG | + | chr7_2:32289839-32289858 | Msa1055950:CDS | 60.0% | |
| GTGAAGACCTCGCCGTTCCA+GGG | - | chr7_2:32289854-32289873 | None:intergenic | 60.0% | |
| AGTGAAGACCTCGCCGTTCC+AGG | - | chr7_2:32289855-32289874 | None:intergenic | 60.0% | |
| TGGAACGGCGAGGTCTTCAC+TGG | + | chr7_2:32289854-32289873 | Msa1055950:CDS | 60.0% | |
| TGGCGAAGTGGACCCTGGAA+CGG | + | chr7_2:32289839-32289858 | Msa1055950:CDS | 60.0% | |
| GTGAAGACCTCGCCGTTCCA+GGG | - | chr7_2:32289854-32289873 | None:intergenic | 60.0% | |
| AGTGAAGACCTCGCCGTTCC+AGG | - | chr7_2:32289855-32289874 | None:intergenic | 60.0% | |
| TGGAACGGCGAGGTCTTCAC+TGG | + | chr7_2:32289854-32289873 | Msa1055950:CDS | 60.0% | |
| AAGTGGACCCTGGAACGGCG+AGG | + | chr7_2:32289844-32289863 | Msa1055950:CDS | 65.0% | |
| GGACCGGTGGGTGTGTTCGA+AGG | + | chr7_2:32290197-32290216 | Msa1055950:CDS | 65.0% | |
| AAGTGGACCCTGGAACGGCG+AGG | + | chr7_2:32289844-32289863 | Msa1055950:CDS | 65.0% | |
| GGACCGGTGGGTGTGTTCGA+AGG | + | chr7_2:32290197-32290216 | Msa1055950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 32289215 | 32290324 | 32289215 | ID=Msa1055950;Name=Msa1055950 |
| chr7_2 | mRNA | 32289215 | 32290324 | 32289215 | ID=Msa1055950-mRNA-1;Parent=Msa1055950;Name=Msa1055950-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|369 |
| chr7_2 | exon | 32289215 | 32290324 | 32289215 | ID=Msa1055950-mRNA-1:exon:6472;Parent=Msa1055950-mRNA-1 |
| chr7_2 | CDS | 32289215 | 32290324 | 32289215 | ID=Msa1055950-mRNA-1:cds;Parent=Msa1055950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
