AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1063340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063340 MtrunA17_Chr7g0242551 97.253 364 10 0 1 364 1 364 0.0 733
Msa1063340 MtrunA17_Chr4g0006371 77.898 371 73 2 2 363 1 371 0.0 614
Msa1063340 MtrunA17_Chr5g0437181 67.403 362 111 3 2 362 1 356 0.0 514
Msa1063340 MtrunA17_Chr3g0113641 64.365 362 124 2 1 362 1 357 1.07e-180 505
Msa1063340 MtrunA17_Chr8g0375601 40.282 355 204 4 11 364 7 354 2.68e-90 275
Msa1063340 MtrunA17_Chr8g0375671 38.395 349 207 2 15 363 18 358 7.13e-88 269
Msa1063340 MtrunA17_Chr8g0375571 41.250 320 180 2 15 334 11 322 5.23e-85 261
Msa1063340 MtrunA17_Chr3g0128001 42.991 321 165 6 24 342 13 317 1.13e-83 257
Msa1063340 MtrunA17_Chr5g0421041 38.110 328 189 4 15 342 13 326 1.60e-82 255
Msa1063340 MtrunA17_Chr5g0423251 37.536 349 206 4 15 363 13 349 2.12e-82 254
Msa1063340 MtrunA17_Chr8g0345831 40.588 340 187 7 21 358 13 339 1.14e-81 253
Msa1063340 MtrunA17_Chr5g0420981 37.195 328 196 4 15 342 18 335 2.21e-81 252
Msa1063340 MtrunA17_Chr5g0423191 38.415 328 190 4 15 342 13 328 2.62e-81 252
Msa1063340 MtrunA17_Chr5g0398291 38.739 333 198 5 14 342 7 337 5.38e-81 251
Msa1063340 MtrunA17_Chr2g0314391 38.806 335 193 4 15 347 36 360 1.55e-80 251
Msa1063340 MtrunA17_Chr8g0365241 36.890 328 196 4 15 342 23 339 2.77e-80 249
Msa1063340 MtrunA17_Chr3g0109041 38.889 360 196 9 10 360 6 350 4.40e-80 249
Msa1063340 MtrunA17_Chr5g0420951 37.805 328 194 4 15 342 18 335 8.48e-80 248
Msa1063340 MtrunA17_Chr5g0423221 37.500 328 194 3 15 342 37 353 9.71e-80 249
Msa1063340 MtrunA17_Chr7g0239101 37.644 348 206 5 11 358 16 352 2.27e-79 247
Msa1063340 MtrunA17_Chr2g0314381 38.602 329 191 4 15 342 42 360 4.32e-79 247
Msa1063340 MtrunA17_Chr5g0423201 37.386 329 193 4 15 342 13 329 6.24e-79 246
Msa1063340 MtrunA17_Chr2g0296371 39.820 334 187 6 12 342 14 336 7.18e-79 246
Msa1063340 MtrunA17_Chr5g0421011 38.110 328 191 3 15 342 13 328 9.98e-79 245
Msa1063340 MtrunA17_Chr5g0420941 37.805 328 192 4 15 342 11 326 1.30e-78 245
Msa1063340 MtrunA17_Chr2g0314401 38.617 347 201 4 15 360 17 352 2.77e-78 244
Msa1063340 MtrunA17_Chr5g0421101 37.500 328 193 4 15 342 13 328 4.23e-78 244
Msa1063340 MtrunA17_Chr7g0239111 38.253 332 194 5 11 342 16 336 9.87e-78 243
Msa1063340 MtrunA17_Chr7g0239821 36.676 349 210 4 11 359 25 362 4.09e-77 242
Msa1063340 MtrunA17_Chr5g0421091 36.474 329 196 4 15 342 11 327 1.68e-76 239
Msa1063340 MtrunA17_Chr5g0420901 37.758 339 196 5 15 350 12 338 1.72e-75 237
Msa1063340 MtrunA17_Chr3g0114861 38.623 334 189 5 12 343 3 322 1.95e-75 236
Msa1063340 MtrunA17_Chr8g0375701 40.000 325 186 4 37 360 37 353 2.87e-75 236
Msa1063340 MtrunA17_Chr1g0162191 39.062 320 186 3 23 342 20 330 5.26e-75 236
Msa1063340 MtrunA17_Chr1g0179801 37.110 353 205 7 15 359 27 370 7.74e-73 231
Msa1063340 MtrunA17_Chr7g0239121 35.244 349 214 6 11 358 12 349 2.66e-72 229
Msa1063340 MtrunA17_Chr8g0370711 38.384 297 178 3 50 346 48 339 9.36e-71 225
Msa1063340 MtrunA17_Chr5g0423211 36.747 332 192 7 15 342 13 330 7.56e-70 223
Msa1063340 MtrunA17_Chr3g0145171 37.024 289 178 2 49 337 47 331 3.70e-69 221
Msa1063340 MtrunA17_Chr7g0239071 40.809 272 158 1 87 358 29 297 9.97e-69 218
Msa1063340 MtrunA17_Chr5g0424201 36.905 336 195 7 12 342 3 326 2.88e-68 218
Msa1063340 MtrunA17_Chr1g0184151 36.728 324 189 7 21 342 10 319 4.73e-68 218
Msa1063340 MtrunA17_Chr7g0265221 34.072 361 213 9 15 359 26 377 4.76e-68 219
Msa1063340 MtrunA17_Chr8g0336781 34.530 362 217 8 1 357 49 395 1.21e-67 218
Msa1063340 MtrunA17_Chr5g0424211 37.538 325 186 7 12 331 3 315 2.02e-67 216
Msa1063340 MtrunA17_Chr8g0375681 40.809 272 158 1 89 360 15 283 3.64e-67 213
Msa1063340 MtrunA17_Chr6g0455481 37.160 331 189 6 24 351 17 331 7.48e-67 214
Msa1063340 MtrunA17_Chr4g0064781 37.627 295 175 3 41 334 36 322 3.01e-66 213
Msa1063340 MtrunA17_Chr8g0370721 37.847 288 175 2 50 337 48 331 4.86e-66 213
Msa1063340 MtrunA17_Chr2g0289341 35.806 310 187 5 53 360 3 302 8.75e-65 208
Msa1063340 MtrunA17_Chr2g0311921 33.983 359 221 6 6 360 10 356 9.11e-65 209
Msa1063340 MtrunA17_Chr8g0336631 33.333 357 218 7 6 357 19 360 1.20e-64 209
Msa1063340 MtrunA17_Chr7g0220011 38.182 330 186 9 24 351 14 327 2.06e-64 207
Msa1063340 MtrunA17_Chr1g0184161 35.385 325 194 7 21 343 10 320 2.21e-64 208
Msa1063340 MtrunA17_Chr5g0405411 35.629 334 195 9 15 343 7 325 2.45e-64 208
Msa1063340 MtrunA17_Chr4g0045411 36.705 346 193 9 28 360 10 342 3.61e-64 207
Msa1063340 MtrunA17_Chr8g0336851 33.521 355 217 7 7 357 20 359 4.81e-64 207
Msa1063340 MtrunA17_Chr4g0066121 33.242 364 223 8 1 359 14 362 5.71e-64 207
Msa1063340 MtrunA17_Chr8g0348081 33.241 361 222 7 1 357 14 359 5.83e-64 207
Msa1063340 MtrunA17_Chr3g0126741 34.971 346 192 8 12 345 20 344 5.86e-64 207
Msa1063340 MtrunA17_Chr2g0311831 35.097 359 216 8 6 360 24 369 4.53e-63 205
Msa1063340 MtrunA17_Chr7g0250511 37.126 334 192 8 17 346 16 335 5.17e-63 205
Msa1063340 MtrunA17_Chr2g0311761 34.262 359 220 7 6 360 24 370 5.76e-63 205
Msa1063340 MtrunA17_Chr8g0336761 33.240 358 216 8 6 357 19 359 1.12e-62 204
Msa1063340 MtrunA17_Chr5g0439011 35.463 313 188 6 52 360 3 305 1.68e-62 202
Msa1063340 MtrunA17_Chr3g0087031 34.627 335 207 7 15 347 24 348 2.83e-62 203
Msa1063340 MtrunA17_Chr8g0336861 33.240 358 220 9 6 358 19 362 3.58e-62 203
Msa1063340 MtrunA17_Chr7g0220001 35.258 329 197 5 24 351 16 329 3.66e-62 202
Msa1063340 MtrunA17_Chr3g0121141 34.951 309 189 6 53 360 3 300 4.12e-62 201
Msa1063340 MtrunA17_Chr8g0371921 34.615 338 201 9 11 343 3 325 4.14e-62 203
Msa1063340 MtrunA17_Chr3g0145181 34.593 344 211 6 15 354 13 346 4.54e-62 202
Msa1063340 MtrunA17_Chr7g0232161 37.011 281 166 4 15 295 25 294 4.97e-62 201
Msa1063340 MtrunA17_Chr8g0371931 34.568 324 194 8 25 343 15 325 6.15e-62 202
Msa1063340 MtrunA17_Chr3g0125201 39.502 281 152 6 54 329 3 270 8.24e-62 200
Msa1063340 MtrunA17_Chr8g0336751 35.311 354 212 7 6 355 50 390 1.28e-61 202
Msa1063340 MtrunA17_Chr1g0162351 33.520 358 205 8 23 360 44 388 3.75e-61 201
Msa1063340 MtrunA17_Chr1g0162361 35.775 355 191 11 23 360 1 335 4.39e-61 199
Msa1063340 MtrunA17_Chr5g0412671 35.860 343 182 9 16 342 5 325 4.47e-61 199
Msa1063340 MtrunA17_Chr5g0426891 33.735 332 203 9 15 342 4 322 1.05e-60 198
Msa1063340 MtrunA17_Chr1g0184121 34.365 323 197 6 21 341 9 318 2.05e-60 197
Msa1063340 MtrunA17_Chr4g0045441 37.538 325 178 8 54 360 26 343 2.42e-60 198
Msa1063340 MtrunA17_Chr5g0412651 35.758 330 200 6 16 342 5 325 2.78e-60 197
Msa1063340 MtrunA17_Chr1g0162321 33.799 358 204 9 23 360 44 388 8.23e-60 197
Msa1063340 MtrunA17_Chr5g0412681 37.755 294 166 7 53 342 32 312 2.07e-59 195
Msa1063340 MtrunA17_Chr1g0184101 36.000 325 191 8 21 342 9 319 3.17e-58 192
Msa1063340 MtrunA17_Chr6g0472861 34.332 367 209 10 6 357 19 368 4.71e-58 192
Msa1063340 MtrunA17_Chr2g0311861 34.637 358 199 10 6 360 20 345 5.56e-58 191
Msa1063340 MtrunA17_Chr4g0050031 35.227 352 210 8 11 355 19 359 7.01e-58 192
Msa1063340 MtrunA17_Chr2g0314371 35.110 319 172 7 15 310 17 323 1.13e-57 190
Msa1063340 MtrunA17_Chr5g0420721 39.130 230 137 1 113 342 4 230 2.14e-57 187
Msa1063340 MtrunA17_Chr3g0145201 36.039 308 186 5 51 354 681 981 3.40e-57 200
Msa1063340 MtrunA17_Chr4g0045471 36.000 325 184 8 54 360 26 344 3.68e-57 189
Msa1063340 MtrunA17_Chr2g0311701 33.333 354 198 9 6 342 24 356 7.92e-57 189
Msa1063340 MtrunA17_Chr4g0045451 33.708 356 205 9 23 360 1 343 1.66e-56 188
Msa1063340 MtrunA17_Chr7g0239091 32.622 328 200 6 15 342 125 431 1.86e-56 191
Msa1063340 MtrunA17_Chr1g0184111 33.025 324 202 6 21 342 9 319 2.05e-56 187
Msa1063340 MtrunA17_Chr8g0364471 32.320 362 222 8 5 358 23 369 2.13e-56 188
Msa1063340 MtrunA17_Chr2g0311691 34.006 347 205 8 6 342 18 350 1.00e-55 186
Msa1063340 MtrunA17_Chr4g0045431 33.811 349 200 9 30 360 8 343 1.41e-55 185
Msa1063340 MtrunA17_Chr2g0311681 32.853 347 209 8 6 342 18 350 2.34e-55 185
Msa1063340 MtrunA17_Chr7g0225881 32.603 365 227 7 6 363 19 371 6.99e-55 184
Msa1063340 MtrunA17_Chr3g0102041 32.381 315 195 5 40 341 13 322 7.38e-55 184
Msa1063340 MtrunA17_Chr1g0184241 33.234 337 209 6 15 350 34 355 1.76e-54 183
Msa1063340 MtrunA17_Chr3g0114871 37.063 286 164 7 10 292 2 274 2.33e-54 180
Msa1063340 MtrunA17_Chr1g0167951 33.618 351 215 8 6 353 11 346 1.07e-53 181
Msa1063340 MtrunA17_Chr1g0167911 34.593 344 200 8 6 342 11 336 1.12e-53 181
Msa1063340 MtrunA17_Chr6g0488511 38.628 277 154 7 54 326 3 267 4.42e-53 177
Msa1063340 MtrunA17_Chr2g0311741 33.754 317 199 6 36 350 9 316 4.93e-53 178
Msa1063340 MtrunA17_Chr1g0187811 31.148 366 229 10 5 358 135 489 7.15e-53 182
Msa1063340 MtrunA17_Chr1g0187831 31.165 369 233 9 5 364 20 376 7.27e-53 179
Msa1063340 MtrunA17_Chr7g0235951 30.194 361 231 7 5 358 23 369 1.08e-52 178
Msa1063340 MtrunA17_Chr2g0332191 35.127 316 183 8 38 342 29 333 1.19e-52 178
Msa1063340 MtrunA17_Chr1g0161041 34.884 344 206 8 2 342 47 375 2.79e-52 178
Msa1063340 MtrunA17_Chr6g0474391 33.851 322 195 4 25 339 42 352 3.10e-52 177
Msa1063340 MtrunA17_Chr1g0187821 32.425 367 216 10 5 358 19 366 3.69e-52 177
Msa1063340 MtrunA17_Chr2g0311711 33.528 343 205 10 8 342 24 351 1.69e-51 175
Msa1063340 MtrunA17_Chr3g0093761 32.378 349 214 8 15 358 18 349 2.50e-51 174
Msa1063340 MtrunA17_Chr8g0351101 32.198 323 202 6 23 339 30 341 6.96e-51 174
Msa1063340 MtrunA17_Chr1g0204181 33.540 322 196 5 25 339 37 347 7.43e-51 174
Msa1063340 MtrunA17_Chr7g0266651 31.551 374 223 11 2 363 11 363 1.07e-50 173
Msa1063340 MtrunA17_Chr8g0354261 33.537 328 196 8 15 334 33 346 1.12e-50 173
Msa1063340 MtrunA17_Chr8g0354241 32.822 326 201 7 15 334 33 346 1.73e-50 173
Msa1063340 MtrunA17_Chr2g0319491 35.274 292 169 8 54 343 33 306 3.29e-50 171
Msa1063340 MtrunA17_Chr1g0161081 34.139 331 200 9 15 342 37 352 9.55e-50 171
Msa1063340 MtrunA17_Chr3g0093741 32.000 350 215 9 15 358 18 350 3.09e-49 169
Msa1063340 MtrunA17_Chr1g0167961 32.370 346 214 9 15 355 35 365 5.17e-49 169
Msa1063340 MtrunA17_Chr3g0093751 31.714 350 216 9 15 358 18 350 6.21e-49 168
Msa1063340 MtrunA17_Chr4g0055591 31.781 365 220 11 5 360 15 359 1.30e-48 167
Msa1063340 MtrunA17_Chr3g0125421 31.343 335 203 6 24 347 14 332 2.81e-48 167
Msa1063340 MtrunA17_Chr1g0161111 33.233 331 203 9 15 342 96 411 7.26e-47 164
Msa1063340 MtrunA17_Chr2g0311631 32.249 338 201 9 15 342 22 341 2.01e-46 162
Msa1063340 MtrunA17_Chr4g0045461 36.275 306 172 9 54 342 26 325 5.41e-46 161
Msa1063340 MtrunA17_Chr8g0384461 31.529 314 186 7 51 349 44 343 1.89e-45 159
Msa1063340 MtrunA17_Chr7g0247991 31.728 353 220 9 5 350 23 361 1.15e-44 157
Msa1063340 MtrunA17_Chr1g0167931 30.618 356 190 10 6 357 11 313 1.58e-44 155
Msa1063340 MtrunA17_Chr8g0335411 29.917 361 232 8 5 358 23 369 1.98e-44 157
Msa1063340 MtrunA17_Chr1g0191201 30.449 312 198 4 47 347 46 349 2.11e-44 157
Msa1063340 MtrunA17_Chr7g0265351 33.013 312 187 9 53 358 38 333 2.60e-44 155
Msa1063340 MtrunA17_Chr4g0066991 28.729 362 215 8 5 358 23 349 6.70e-44 155
Msa1063340 MtrunA17_Chr3g0105281 33.221 298 162 8 54 343 34 302 1.02e-43 154
Msa1063340 MtrunA17_Chr1g0194321 33.230 322 188 8 38 343 4 314 5.99e-42 149
Msa1063340 MtrunA17_Chr3g0130391 32.534 292 186 3 55 339 67 354 8.56e-42 150
Msa1063340 MtrunA17_Chr2g0285931 31.667 300 182 9 54 343 28 314 1.97e-41 148
Msa1063340 MtrunA17_Chr4g0011311 31.673 281 175 7 5 283 23 288 2.75e-41 147
Msa1063340 MtrunA17_Chr4g0068891 32.550 298 178 7 54 343 20 302 3.63e-41 147
Msa1063340 MtrunA17_Chr7g0236011 29.972 357 217 11 15 358 33 369 4.75e-40 145
Msa1063340 MtrunA17_Chr8g0358941 29.968 317 187 9 40 343 20 314 6.26e-40 144
Msa1063340 MtrunA17_Chr1g0148771 30.124 322 202 9 9 322 13 319 7.68e-40 144
Msa1063340 MtrunA17_Chr3g0092531 31.000 300 193 9 54 350 6 294 5.94e-36 133
Msa1063340 MtrunA17_Chr7g0235981 31.273 275 175 4 92 360 59 325 2.28e-35 132
Msa1063340 MtrunA17_Chr5g0420881 44.355 124 69 0 219 342 1 124 2.85e-35 126
Msa1063340 MtrunA17_Chr3g0126761 40.230 174 101 3 171 344 44 214 2.15e-34 126
Msa1063340 MtrunA17_Chr2g0313111 28.391 317 206 9 32 343 6 306 5.61e-34 128
Msa1063340 MtrunA17_Chr8g0384481 29.801 302 190 9 51 341 56 346 6.35e-34 129
Msa1063340 MtrunA17_Chr8g0336831 32.083 240 149 5 1 239 14 240 1.79e-33 124
Msa1063340 MtrunA17_Chr4g0053251 30.137 292 172 8 53 321 7 289 1.82e-33 126
Msa1063340 MtrunA17_Chr8g0375661 37.580 157 93 1 15 171 18 169 4.17e-33 121
Msa1063340 MtrunA17_Chr5g0394071 40.678 177 91 5 173 347 4 168 2.73e-32 119
Msa1063340 MtrunA17_Chr8g0375641 35.669 157 96 1 15 171 18 169 6.07e-32 118
Msa1063340 MtrunA17_Chr4g0075471 45.669 127 67 1 218 342 28 154 1.03e-31 117
Msa1063340 MtrunA17_Chr8g0362741 30.714 280 164 8 5 283 23 273 1.93e-31 120
Msa1063340 MtrunA17_Chr4g0052251 29.000 300 189 11 54 343 29 314 2.23e-31 121
Msa1063340 MtrunA17_Chr4g0064771 37.267 161 99 1 174 334 29 187 4.37e-31 117
Msa1063340 MtrunA17_Chr7g0233661 46.565 131 63 2 217 347 19 142 1.41e-29 111
Msa1063340 MtrunA17_Chr8g0336801 39.716 141 81 2 220 357 12 151 1.59e-29 111
Msa1063340 MtrunA17_Chr5g0407781 28.912 294 187 7 53 343 4 278 2.18e-29 115
Msa1063340 MtrunA17_Chr8g0389941 30.070 286 175 8 77 342 51 331 3.34e-29 115
Msa1063340 MtrunA17_Chr5g0407731 30.169 295 180 8 54 343 33 306 1.24e-27 110
Msa1063340 MtrunA17_Chr1g0170631 34.270 178 110 3 171 346 3 175 2.72e-27 106
Msa1063340 MtrunA17_Chr2g0293931 36.517 178 104 5 174 343 10 186 3.92e-27 106
Msa1063340 MtrunA17_Chr4g0055911 28.618 304 193 11 52 342 7 299 3.93e-27 109
Msa1063340 MtrunA17_Chr4g0037611 40.645 155 79 5 191 343 11 154 1.23e-26 104
Msa1063340 MtrunA17_Chr4g0055871 28.713 303 189 11 52 342 7 294 2.19e-26 107
Msa1063340 MtrunA17_Chr8g0348951 28.065 310 195 11 47 345 3 295 2.84e-26 107
Msa1063340 MtrunA17_Chr4g0004061 30.897 301 180 10 54 342 9 293 1.88e-25 104
Msa1063340 MtrunA17_Chr7g0247741 29.508 305 182 10 54 345 11 295 2.35e-25 104
Msa1063340 MtrunA17_Chr1g0158011 37.288 177 105 5 168 341 67 240 2.41e-25 103
Msa1063340 MtrunA17_Chr8g0336871 35.088 171 98 4 182 349 1 161 2.62e-25 100
Msa1063340 MtrunA17_Chr6g0486831 30.928 291 168 12 77 342 38 320 3.44e-25 104
Msa1063340 MtrunA17_Chr4g0004071 29.293 297 189 10 54 342 9 292 5.26e-24 100
Msa1063340 MtrunA17_Chr5g0420891 32.484 157 97 2 15 171 12 159 1.60e-23 95.5
Msa1063340 MtrunA17_Chr3g0138351 25.723 311 195 10 51 342 4 297 2.11e-23 99.0
Msa1063340 MtrunA17_Chr8g0364171 43.478 115 61 2 169 283 16 126 2.41e-23 94.4
Msa1063340 MtrunA17_Chr4g0009541 26.667 285 178 10 73 342 27 295 3.92e-22 95.5
Msa1063340 MtrunA17_Chr7g0256741 28.028 289 190 10 77 357 34 312 1.09e-21 94.4
Msa1063340 MtrunA17_Chr8g0336791 31.183 186 117 4 1 185 14 189 1.86e-21 90.9
Msa1063340 MtrunA17_Chr8g0375581 58.730 63 26 0 217 279 23 85 1.39e-20 85.1
Msa1063340 MtrunA17_Chr1g0158021 29.778 225 143 8 54 275 49 261 2.92e-20 89.4
Msa1063340 MtrunA17_Chr1g0158031 34.659 176 94 7 170 341 1 159 4.61e-20 86.7
Msa1063340 MtrunA17_Chr4g0009561 25.887 282 180 9 75 342 32 298 1.82e-19 87.8
Msa1063340 MtrunA17_Chr1g0161101 45.631 103 45 3 214 315 401 493 1.16e-18 87.0
Msa1063340 MtrunA17_Chr1g0167921 39.640 111 63 3 172 282 50 156 3.96e-17 78.2
Msa1063340 MtrunA17_Chr8g0375591 34.746 118 71 2 15 131 11 123 8.58e-17 76.3
Msa1063340 MtrunA17_Chr3g0092581 30.178 169 110 6 183 349 3 165 2.70e-16 76.3
Msa1063340 MtrunA17_Chr7g0219991 37.383 107 63 1 172 278 249 351 4.88e-16 78.6
Msa1063340 MtrunA17_Chr7g0219991 29.333 150 94 5 24 171 14 153 1.05e-12 68.6
Msa1063340 MtrunA17_Chr2g0311611 44.444 72 32 2 219 283 1 71 9.04e-16 71.6
Msa1063340 MtrunA17_Chr4g0075431 30.380 158 96 4 54 209 4 149 4.13e-15 72.8
Msa1063340 MtrunA17_Chr8g0340641 26.087 276 183 6 71 331 83 352 4.68e-15 75.9
Msa1063340 MtrunA17_Chr2g0319521 37.815 119 65 5 171 283 9 124 5.05e-14 68.6
Msa1063340 MtrunA17_Chr1g0148781 24.739 287 186 10 75 346 34 305 5.16e-14 72.0
Msa1063340 MtrunA17_Chr2g0311641 32.353 136 81 3 15 148 22 148 6.33e-14 69.3
Msa1063340 MtrunA17_Chr2g0311621 37.864 103 55 2 15 117 22 115 9.41e-14 67.4
Msa1063340 MtrunA17_Chr1g0170641 30.380 158 96 6 20 174 18 164 3.69e-13 67.0
Msa1063340 MtrunA17_Chr7g0235991 28.947 152 102 3 50 200 17 163 1.12e-12 66.2
Msa1063340 MtrunA17_Chr8g0364161 29.252 147 89 5 15 155 33 170 1.27e-12 65.9
Msa1063340 MtrunA17_Chr2g0319531 40.000 105 52 5 50 148 35 134 1.70e-12 65.5
Msa1063340 MtrunA17_Chr1g0168001 27.333 150 107 2 6 154 11 159 1.95e-11 62.0
Msa1063340 MtrunA17_Chr3g0092571 31.667 120 76 3 54 172 6 120 2.69e-11 60.8
Msa1063340 MtrunA17_Chr7g0233671 30.159 126 79 3 51 173 38 157 4.32e-11 60.8
Msa1063340 MtrunA17_Chr2g0293941 33.333 111 62 5 52 161 17 116 4.45e-11 60.8
Msa1063340 MtrunA17_Chr5g0407591 37.037 81 51 0 263 343 7 87 5.34e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063340 AT5G05600.1 66.197 355 115 2 8 362 20 369 3.95e-177 497
Msa1063340 AT3G11180.1 65.084 358 120 2 5 362 46 398 5.78e-176 495
Msa1063340 AT3G11180.2 65.318 346 115 2 5 350 46 386 3.65e-171 483
Msa1063340 AT3G55970.1 61.602 362 137 2 2 362 1 361 7.07e-165 465
Msa1063340 AT2G38240.1 61.236 356 130 3 5 360 2 349 6.36e-161 455
Msa1063340 AT5G05600.2 65.942 276 89 2 8 283 20 290 3.21e-135 387
Msa1063340 AT3G55970.2 61.484 283 107 2 2 283 1 282 6.99e-128 369
Msa1063340 AT4G22880.1 36.769 359 212 6 12 363 4 354 2.77e-79 247
Msa1063340 AT4G22880.2 36.769 359 212 6 12 363 4 354 2.77e-79 247
Msa1063340 AT4G22880.3 36.769 359 212 6 12 363 4 354 2.77e-79 247
Msa1063340 AT3G21420.1 40.841 333 191 4 12 342 14 342 6.60e-78 244
Msa1063340 AT1G17020.1 35.652 345 215 3 16 360 19 356 1.28e-77 243
Msa1063340 AT4G10490.1 40.673 327 175 9 21 342 13 325 4.53e-76 239
Msa1063340 AT4G25300.1 36.585 328 198 4 16 342 18 336 3.91e-75 236
Msa1063340 AT5G24530.1 38.080 323 181 7 24 342 13 320 5.58e-75 236
Msa1063340 AT1G17010.1 36.280 328 200 4 16 342 19 338 1.54e-74 235
Msa1063340 AT4G10500.1 39.185 319 180 7 26 342 20 326 1.13e-73 233
Msa1063340 AT1G78550.1 34.218 339 212 4 6 342 7 336 1.26e-72 230
Msa1063340 AT4G16330.2 39.617 313 168 8 53 360 66 362 2.80e-72 229
Msa1063340 AT4G25310.1 36.364 319 191 4 24 342 27 333 1.83e-69 222
Msa1063340 AT5G08640.2 38.507 335 190 7 12 342 3 325 1.14e-68 219
Msa1063340 AT5G08640.1 38.507 335 190 7 12 342 3 325 1.14e-68 219
Msa1063340 AT2G36690.2 34.930 355 206 9 15 359 21 360 3.77e-65 211
Msa1063340 AT2G36690.1 34.930 355 206 9 15 359 21 360 3.77e-65 211
Msa1063340 AT3G51240.1 36.533 323 192 7 21 341 10 321 7.76e-65 210
Msa1063340 AT3G13610.1 36.103 349 200 11 15 358 27 357 5.04e-64 208
Msa1063340 AT3G60290.1 34.682 346 211 8 18 360 19 352 6.43e-63 205
Msa1063340 AT1G06620.1 35.511 352 204 9 6 350 18 353 2.62e-62 204
Msa1063340 AT5G54000.2 34.132 334 209 5 15 345 9 334 9.81e-62 202
Msa1063340 AT5G20400.1 35.915 284 179 2 51 334 42 322 1.46e-61 201
Msa1063340 AT1G55290.1 35.429 350 202 11 15 358 26 357 2.13e-61 201
Msa1063340 AT1G49390.1 36.111 288 181 2 51 338 42 326 2.45e-61 201
Msa1063340 AT4G16330.1 41.016 256 139 5 109 360 9 256 1.11e-60 196
Msa1063340 AT1G78550.2 35.409 257 163 1 86 342 5 258 1.95e-60 196
Msa1063340 AT1G77330.1 40.511 274 147 4 54 322 3 265 2.53e-60 197
Msa1063340 AT1G12010.1 33.758 314 193 6 51 362 4 304 1.88e-59 195
Msa1063340 AT5G20550.1 34.337 332 195 7 15 337 9 326 3.51e-59 195
Msa1063340 AT1G06650.2 34.444 360 216 8 6 357 17 364 8.73e-59 194
Msa1063340 AT4G25420.1 34.743 331 197 5 24 347 38 356 3.73e-58 193
Msa1063340 AT3G19000.1 39.692 325 167 11 54 360 32 345 4.19e-58 192
Msa1063340 AT2G44800.1 34.535 333 203 8 17 346 18 338 4.89e-58 192
Msa1063340 AT1G05010.1 37.091 275 162 5 53 326 3 267 1.51e-57 190
Msa1063340 AT1G62380.1 33.333 300 187 5 51 349 4 291 7.20e-57 188
Msa1063340 AT5G54000.1 35.547 256 163 1 90 345 1 254 9.13e-56 184
Msa1063340 AT3G19010.1 33.540 322 190 7 54 360 28 340 9.18e-56 186
Msa1063340 AT3G19010.4 33.540 322 190 7 54 360 28 340 9.18e-56 186
Msa1063340 AT1G06640.1 33.333 360 220 8 6 357 17 364 2.61e-55 186
Msa1063340 AT1G03410.2 35.613 351 199 11 3 342 8 342 4.30e-55 185
Msa1063340 AT1G03410.1 35.613 351 199 11 3 342 45 379 5.11e-55 186
Msa1063340 AT5G43440.1 33.824 340 199 9 15 344 24 347 5.52e-55 184
Msa1063340 AT1G49390.2 36.145 249 157 1 90 338 1 247 1.34e-54 181
Msa1063340 AT5G51810.1 33.046 348 210 8 24 364 40 371 2.70e-54 183
Msa1063340 AT2G19590.1 38.628 277 157 5 51 326 8 272 3.39e-54 181
Msa1063340 AT1G06645.1 34.349 361 212 9 6 357 30 374 8.88e-54 182
Msa1063340 AT5G63590.1 35.974 303 182 7 46 344 5 299 1.32e-53 179
Msa1063340 AT5G63600.1 34.708 291 178 6 52 342 31 309 2.23e-53 179
Msa1063340 AT5G59530.1 32.603 365 201 11 15 360 24 362 2.28e-53 180
Msa1063340 AT5G63600.2 34.932 292 177 7 52 342 31 310 1.77e-52 177
Msa1063340 AT5G59540.1 31.302 361 230 8 6 360 16 364 1.96e-52 178
Msa1063340 AT1G04350.1 32.362 343 211 10 6 342 13 340 1.05e-51 176
Msa1063340 AT2G30840.1 33.426 359 221 11 3 355 9 355 5.21e-51 174
Msa1063340 AT1G60980.1 33.762 311 183 6 26 325 36 334 1.56e-50 173
Msa1063340 AT3G51240.2 38.819 237 138 4 107 341 6 237 1.58e-49 167
Msa1063340 AT4G25310.2 31.348 319 179 4 24 342 27 305 2.07e-49 169
Msa1063340 AT3G61400.1 32.486 354 212 11 2 342 12 351 2.47e-49 170
Msa1063340 AT3G12900.1 35.119 336 189 11 15 342 22 336 2.57e-49 169
Msa1063340 AT5G43450.1 31.250 336 206 8 15 342 24 342 3.02e-49 169
Msa1063340 AT2G30830.1 32.464 345 207 9 5 341 11 337 1.22e-48 168
Msa1063340 AT1G15550.1 34.576 295 175 9 53 342 56 337 1.65e-48 167
Msa1063340 AT5G07480.1 32.335 334 205 8 20 346 18 337 2.61e-48 167
Msa1063340 AT1G04380.1 34.472 322 173 11 51 357 42 340 3.98e-48 166
Msa1063340 AT1G03400.1 32.303 356 208 10 3 349 8 339 7.56e-48 166
Msa1063340 AT2G30840.3 33.148 359 216 12 3 355 9 349 1.73e-47 165
Msa1063340 AT1G06620.2 35.125 279 167 7 6 283 18 283 4.26e-47 162
Msa1063340 AT5G07200.1 31.392 309 193 5 26 326 37 334 2.26e-46 162
Msa1063340 AT2G19590.2 39.024 246 140 4 82 326 21 257 1.06e-45 158
Msa1063340 AT3G19010.3 30.435 322 170 7 54 360 28 310 3.91e-45 157
Msa1063340 AT1G06650.1 34.859 284 175 5 6 288 17 291 4.14e-45 157
Msa1063340 AT3G19000.2 41.532 248 117 10 54 283 32 269 5.25e-45 156
Msa1063340 AT4G21200.1 35.906 298 164 11 51 343 39 314 5.64e-45 157
Msa1063340 AT1G80330.1 35.256 312 172 12 44 342 39 333 7.85e-44 155
Msa1063340 AT1G44090.1 31.034 319 211 5 50 362 59 374 9.76e-44 155
Msa1063340 AT4G25420.2 34.082 267 157 5 24 283 38 292 1.17e-43 153
Msa1063340 AT5G43440.2 33.213 277 164 7 15 285 24 285 2.48e-43 152
Msa1063340 AT5G63595.1 33.333 267 150 5 53 319 24 262 4.78e-43 151
Msa1063340 AT1G80340.1 33.670 297 179 8 51 342 47 330 8.37e-43 152
Msa1063340 AT5G12270.1 31.700 347 209 9 23 360 30 357 1.50e-42 152
Msa1063340 AT1G03400.2 30.208 384 207 11 3 349 8 367 2.75e-42 152
Msa1063340 AT1G06640.2 33.692 279 175 5 6 283 17 286 5.70e-42 149
Msa1063340 AT2G25450.1 31.250 368 218 13 6 360 12 357 6.14e-42 150
Msa1063340 AT5G51810.2 33.942 274 158 7 24 290 40 297 8.72e-42 148
Msa1063340 AT5G63580.2 38.627 233 131 5 53 283 18 240 9.09e-42 146
Msa1063340 AT5G43935.1 33.108 296 159 7 54 342 19 282 1.57e-41 147
Msa1063340 AT1G06640.3 33.818 275 172 5 6 279 17 282 1.90e-41 147
Msa1063340 AT4G21690.1 31.229 301 180 10 54 342 47 332 2.85e-41 148
Msa1063340 AT5G63580.1 38.528 231 130 5 53 281 18 238 3.17e-41 145
Msa1063340 AT4G25300.2 39.306 173 103 1 170 342 72 242 3.75e-41 145
Msa1063340 AT1G30040.1 31.313 297 185 9 53 343 30 313 9.70e-41 147
Msa1063340 AT1G50960.1 31.629 313 195 8 33 343 20 315 1.43e-40 146
Msa1063340 AT3G19010.2 34.553 246 138 6 54 284 28 265 1.56e-40 145
Msa1063340 AT1G78440.1 31.457 302 179 10 54 343 18 303 2.00e-40 145
Msa1063340 AT2G30840.2 33.452 281 172 8 5 282 11 279 4.86e-40 144
Msa1063340 AT2G34555.1 29.966 297 188 9 54 344 27 309 4.48e-39 142
Msa1063340 AT3G50210.4 32.542 295 167 11 53 321 7 295 8.09e-39 141
Msa1063340 AT3G50210.1 32.542 295 167 11 53 321 7 295 8.09e-39 141
Msa1063340 AT3G50210.3 32.542 295 167 11 53 321 7 295 8.09e-39 141
Msa1063340 AT5G59540.2 31.690 284 173 8 6 283 16 284 2.20e-38 139
Msa1063340 AT3G61400.2 32.302 291 174 9 2 283 12 288 2.56e-38 139
Msa1063340 AT5G43450.2 30.403 273 168 7 15 282 24 279 1.16e-36 134
Msa1063340 AT1G04380.2 34.959 246 127 9 51 285 42 265 1.49e-34 128
Msa1063340 AT3G49630.1 30.822 292 169 10 54 321 9 291 5.24e-33 125
Msa1063340 AT3G49620.1 32.082 293 164 11 54 321 34 316 1.18e-32 125
Msa1063340 AT3G49630.3 31.022 274 164 9 64 321 23 287 2.59e-32 124
Msa1063340 AT5G58660.1 31.126 302 160 10 51 322 31 314 1.05e-31 122
Msa1063340 AT3G47190.1 26.012 346 169 10 40 348 18 313 9.86e-31 119
Msa1063340 AT1G02400.1 27.848 316 211 9 35 343 5 310 5.38e-30 117
Msa1063340 AT1G47990.1 29.126 309 183 11 51 343 12 300 3.49e-29 115
Msa1063340 AT5G07480.2 33.171 205 127 4 148 346 28 228 4.76e-29 113
Msa1063340 AT1G14130.1 30.293 307 186 10 50 348 2 288 6.36e-29 114
Msa1063340 AT1G30040.2 31.224 237 144 9 53 283 30 253 2.12e-28 112
Msa1063340 AT4G23340.1 31.190 311 179 10 49 345 5 294 2.50e-27 110
Msa1063340 AT3G46500.5 29.618 314 195 11 45 342 5 308 8.89e-27 108
Msa1063340 AT5G58660.2 30.224 268 138 10 51 289 31 278 4.99e-25 103
Msa1063340 AT1G14120.2 27.682 289 187 8 54 338 8 278 8.94e-24 100
Msa1063340 AT1G14120.1 27.682 289 187 8 54 338 8 278 8.94e-24 100
Msa1063340 AT1G14120.3 27.682 289 187 8 54 338 8 278 8.94e-24 100
Msa1063340 AT1G28030.1 28.904 301 187 11 52 339 11 297 1.28e-23 100
Msa1063340 AT3G46500.7 30.175 285 173 11 45 313 5 279 5.89e-23 97.8
Msa1063340 AT4G03070.1 27.157 313 184 11 71 362 32 321 8.73e-23 97.8
Msa1063340 AT1G52820.1 27.597 308 190 10 52 345 10 298 9.41e-23 97.8
Msa1063340 AT3G50210.2 33.333 165 103 3 162 321 51 213 3.04e-22 94.7
Msa1063340 AT3G46490.1 30.189 265 159 9 77 320 34 293 3.46e-22 96.3
Msa1063340 AT3G49630.2 33.133 166 97 4 162 321 61 218 1.51e-21 93.2
Msa1063340 AT5G51310.1 28.223 287 154 11 52 311 3 264 3.96e-21 93.2
Msa1063340 AT1G35190.1 27.673 318 197 12 48 342 3 310 1.23e-19 89.0
Msa1063340 AT1G02400.2 26.199 271 184 8 35 299 5 265 1.46e-19 87.8
Msa1063340 AT3G46490.2 29.412 255 154 9 77 310 34 283 9.31e-19 86.3
Msa1063340 AT1G35190.2 26.349 315 182 12 48 342 3 287 1.29e-18 85.9
Msa1063340 AT4G16765.6 29.911 224 143 8 130 342 15 235 5.90e-18 82.8
Msa1063340 AT4G16765.1 29.911 224 143 8 130 342 15 235 5.90e-18 82.8
Msa1063340 AT4G16765.2 29.911 224 143 8 130 342 15 235 5.90e-18 82.8
Msa1063340 AT4G22870.1 37.607 117 62 3 251 363 1 110 1.38e-17 78.2
Msa1063340 AT4G16765.3 30.556 216 136 8 130 334 15 227 6.09e-17 79.7
Msa1063340 AT1G52800.1 25.503 298 188 11 54 337 10 287 9.87e-17 80.5
Msa1063340 AT4G23340.2 31.638 177 115 4 174 345 1 176 1.56e-16 77.8
Msa1063340 AT4G22870.2 33.835 133 71 5 241 363 26 151 2.70e-16 75.9
Msa1063340 AT3G46500.10 29.730 185 121 5 164 342 53 234 3.50e-15 75.1
Msa1063340 AT3G46500.1 29.730 185 121 5 164 342 53 234 3.50e-15 75.1
Msa1063340 AT3G46500.4 38.261 115 64 3 233 342 60 172 5.00e-15 73.2
Msa1063340 AT4G16770.1 27.757 263 154 11 29 273 2 246 6.56e-13 68.6
Msa1063340 AT3G46480.1 41.489 94 48 3 232 320 155 246 4.09e-12 66.6
Msa1063340 AT4G03050.2 36.283 113 69 3 229 339 271 382 6.73e-12 66.6
Msa1063340 AT4G03050.1 36.283 113 69 3 229 339 271 382 6.73e-12 66.6
Msa1063340 AT3G46500.3 30.818 159 95 6 164 313 53 205 9.19e-12 64.7
Msa1063340 AT3G46500.6 43.023 86 42 3 233 313 91 174 1.61e-11 63.2
Msa1063340 AT3G46500.8 43.023 86 42 3 233 313 91 174 1.61e-11 63.2
Msa1063340 AT1G52820.2 26.423 246 148 10 52 283 10 236 2.09e-11 63.9
Msa1063340 AT4G16765.5 33.333 117 71 3 231 342 75 189 2.17e-11 63.2
Msa1063340 AT2G06960.1 31.579 133 76 4 219 351 30 147 6.57e-11 60.5

Find 133 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACATGATTAATTATTAT+TGG 0.139078 7_2:+55020647 None:intergenic
TTTGCATATAATTAAATAAT+TGG 0.161106 7_2:-55020609 Msa1063340:three_prime_UTR
GTTATTGGCTTGGTCTATTC+AGG 0.182945 7_2:-55020461 Msa1063340:three_prime_UTR
TGATGAGAACGAGAATATTT+TGG 0.206373 7_2:+55020232 None:intergenic
CCACAACCTGACCTTACTTT+AGG 0.259112 7_2:-55021551 Msa1063340:CDS
AAAGACTCAAGTTGAATCTT+TGG 0.262346 7_2:-55020690 Msa1063340:CDS
GTGTGTTTGTGTTTCACTTT+TGG 0.264124 7_2:+55025479 None:intergenic
CTCATCATGTCTTTAGTTTG+AGG 0.278408 7_2:-55020553 Msa1063340:three_prime_UTR
ATGAACTTGGTGCTTGTCTA+AGG 0.285343 7_2:-55021595 Msa1063340:CDS
AGGAAAATAATTGCTGAATA+TGG 0.291479 7_2:-55021716 Msa1063340:CDS
GGTCAGGTTGTGGGCACTTT+GGG 0.293915 7_2:+55021561 None:intergenic
TTGAGTAGCAAAAGTGGTTT+TGG 0.294078 7_2:+55025329 None:intergenic
CCACATAAGCATATTCAAAT+TGG 0.297251 7_2:+55020300 None:intergenic
TCAATTAGCAAATCACTCTT+TGG 0.302764 7_2:+55020812 None:intergenic
ATTCAATAATGGTGAGTGAT+AGG 0.307867 7_2:-55020430 Msa1063340:three_prime_UTR
CACAACCTGACCTTACTTTA+GGG 0.313166 7_2:-55021550 Msa1063340:CDS
ATTGTATGCCTCCTTCTCTT+AGG 0.321604 7_2:-55024993 Msa1063340:CDS
GATTTCCTTATGAATGCATT+TGG 0.349260 7_2:-55021626 Msa1063340:CDS
CTCGGAGGCGTGTCGGGAGT+GGG 0.352008 7_2:-55025214 Msa1063340:CDS
CTCAAGGATGATGGAGTTGC+AGG 0.353715 7_2:+55024955 None:intergenic
CAACATTGGTGACCAAATTC+AGG 0.362684 7_2:-55021402 Msa1063340:intron
TCTCGGAGGCGTGTCGGGAG+TGG 0.362920 7_2:-55025215 Msa1063340:CDS
GCGTGTCTCGGAGGCGTGTC+GGG 0.379504 7_2:-55025220 Msa1063340:CDS
CTCCTCCAAATGCATTCATA+AGG 0.381458 7_2:+55021621 None:intergenic
ATGTTGATGATAAAAGCATT+AGG 0.385222 7_2:+55021419 None:intergenic
AGAGGTATAGGACCTGAATT+TGG 0.393176 7_2:+55021390 None:intergenic
TAACTCTCCTAGTACTTATG+AGG 0.398201 7_2:-55025082 Msa1063340:CDS
CCTAGTACTTATGAGGGTTA+TGG 0.400331 7_2:-55025075 Msa1063340:CDS
GAGGGTTATGGTAGTAGGTT+GGG 0.401553 7_2:-55025063 Msa1063340:CDS
CTTATGAGGGTTATGGTAGT+AGG 0.409116 7_2:-55025068 Msa1063340:CDS
TGAGGGTTATGGTAGTAGGT+TGG 0.420723 7_2:-55025064 Msa1063340:CDS
TATCATCTCAGTTATTGGCT+TGG 0.421199 7_2:-55020471 Msa1063340:three_prime_UTR
CCATAACCCTCATAAGTACT+AGG 0.433102 7_2:+55025075 None:intergenic
GGCCACTTTCAGCTAAGGCT+TGG 0.436609 7_2:+55025400 None:intergenic
AATAAAAGACCGTGTTTCCT+TGG 0.441448 7_2:-55020849 Msa1063340:CDS
TGTTGATGATAAAAGCATTA+GGG 0.446025 7_2:+55021420 None:intergenic
CTATCCCCTCACTCTGATCC+TGG 0.448294 7_2:-55021527 Msa1063340:CDS
TTTGTCACAAGCTCCTTAGC+AGG 0.448606 7_2:+55020788 None:intergenic
AAGGCTTGGACTCGAACTAT+AGG 0.455196 7_2:+55025414 None:intergenic
CTATAGGTTCTGGCCATGCT+TGG 0.458667 7_2:+55025430 None:intergenic
CCAATTTGAATATGCTTATG+TGG 0.464835 7_2:-55020300 Msa1063340:three_prime_UTR
CTTTCATTATCATCCACATA+AGG 0.465083 7_2:+55020345 None:intergenic
CTGTATTCATCATAGGTCAT+TGG 0.466598 7_2:+55020743 None:intergenic
CACTATGGTAACTAGTAACA+TGG 0.468799 7_2:+55020388 None:intergenic
TTTGCTACTCAAAATGATCA+TGG 0.468929 7_2:-55025318 Msa1063340:CDS
AATTCTTCCTTCACTTCAAG+TGG 0.472457 7_2:+55025108 None:intergenic
GACTAAAAGCTTACCTTATG+TGG 0.475654 7_2:-55020358 Msa1063340:three_prime_UTR
TGGATATGTTGCTCTTGAGT+TGG 0.476132 7_2:-55020589 Msa1063340:three_prime_UTR
TTATTGGCTTGGTCTATTCA+GGG 0.482684 7_2:-55020460 Msa1063340:three_prime_UTR
TGGGATTAGTCATGAGTTGA+TGG 0.486105 7_2:-55025169 Msa1063340:CDS
ATGTTGCTCTTGAGTTGGGT+AGG 0.486310 7_2:-55020584 Msa1063340:three_prime_UTR
AGCGTGTCTCGGAGGCGTGT+CGG 0.490742 7_2:-55025221 Msa1063340:CDS
TGGACTCGAACTATAGGTTC+TGG 0.493170 7_2:+55025420 None:intergenic
TTCAATAATGGTGAGTGATA+GGG 0.495056 7_2:-55020429 Msa1063340:three_prime_UTR
AGGTCAGGTTGTGGGCACTT+TGG 0.498360 7_2:+55021560 None:intergenic
GGATATGTTGCTCTTGAGTT+GGG 0.499215 7_2:-55020588 Msa1063340:three_prime_UTR
TATAGGTTCTGGCCATGCTT+GGG 0.499656 7_2:+55025431 None:intergenic
GAGTCAACACTTGTACCATA+TGG 0.500208 7_2:-55020166 Msa1063340:three_prime_UTR
GACTGTGCTCAAGCGTGTCT+CGG 0.500548 7_2:-55025232 Msa1063340:CDS
AAAGGGATTATGAGTGGCGG+TGG 0.501148 7_2:-55020262 Msa1063340:three_prime_UTR
GAGTTGCAGGCCACTTAGCT+TGG 0.501978 7_2:+55024968 None:intergenic
AGTCCATACACAAAATCATC+AGG 0.505463 7_2:+55021485 None:intergenic
ATGATAAAAGCATTAGGGAC+AGG 0.506796 7_2:+55021425 None:intergenic
CATTTCTTAGTTTATCCATA+CGG 0.509374 7_2:+55020109 None:intergenic
AATTCATTCTCAAGAATGAA+TGG 0.509773 7_2:-55020070 Msa1063340:three_prime_UTR
GGTGAGGAAGTGGTTAAGCT+AGG 0.510212 7_2:-55021695 Msa1063340:CDS
GCTTAGGCCACTTTCAGCTA+AGG 0.517429 7_2:+55025395 None:intergenic
CTTCCTTCACTTCAAGTGGA+AGG 0.517701 7_2:+55025112 None:intergenic
AAGTACGTAAAGGAAATGAC+TGG 0.520753 7_2:-55021460 Msa1063340:CDS
TGTGCAAACCTCAAGGATGA+TGG 0.523893 7_2:+55024946 None:intergenic
GTCATTGGTGAGTACAAGGC+TGG 0.527335 7_2:+55020758 None:intergenic
TTCCTTATGAATGCATTTGG+AGG 0.531076 7_2:-55021623 Msa1063340:CDS
AGCACAGTCTCTCTGAGGAC+AGG 0.531914 7_2:+55025246 None:intergenic
AAGTGGTTAAGCTAGGAGGA+AGG 0.532439 7_2:-55021688 Msa1063340:CDS
AGGTGCTCAAGGTCGATCAC+GGG 0.533851 7_2:+55025282 None:intergenic
TTTGCTAATTGAACCTGCTA+AGG 0.534847 7_2:-55020801 Msa1063340:CDS
TAATCCCATGATTCACCACT+TGG 0.535021 7_2:+55025184 None:intergenic
AAAATCATCAGGAAGAAGAA+TGG 0.539442 7_2:+55021496 None:intergenic
TAACCTTCCACTTGAAGTGA+AGG 0.540370 7_2:-55025115 Msa1063340:CDS
CTAAAGTAAGGTCAGGTTGT+GGG 0.541140 7_2:+55021552 None:intergenic
TCGGAGGCGTGTCGGGAGTG+GGG 0.544877 7_2:-55025213 Msa1063340:CDS
GTCCAAGCCTTAGCTGAAAG+TGG 0.545042 7_2:-55025402 Msa1063340:CDS
GGAAATCTTCTTTCAAACCA+AGG 0.546832 7_2:+55021642 None:intergenic
ATAGGTCATTGGTGAGTACA+AGG 0.548760 7_2:+55020754 None:intergenic
CTGCAACTCCATCATCCTTG+AGG 0.549447 7_2:-55024954 Msa1063340:intron
TTCTCAAGAATGAATGGTAG+AGG 0.549651 7_2:-55020064 None:intergenic
TGCTAAGGAGCTTGTGACAA+AGG 0.555227 7_2:-55020786 Msa1063340:CDS
GAGGGGATAGCCCTAAAGTA+AGG 0.558676 7_2:+55021540 None:intergenic
GATAGCCCTAAAGTAAGGTC+AGG 0.561497 7_2:+55021545 None:intergenic
GAGGTGCTCAAGGTCGATCA+CGG 0.564571 7_2:+55025281 None:intergenic
TGAGTCACACTTGTACCGTA+TGG 0.566353 7_2:-55020124 Msa1063340:three_prime_UTR
ATGTTACTAGTTACCATAGT+GGG 0.571369 7_2:-55020386 Msa1063340:three_prime_UTR
ACTAAGAAATGAATGATGAT+CGG 0.571756 7_2:-55020097 Msa1063340:three_prime_UTR
TTAGCTTGGTTCCTAAGAGA+AGG 0.572072 7_2:+55024982 None:intergenic
TGAGTTGATGGAAAGTGCTA+AGG 0.572726 7_2:-55025157 Msa1063340:CDS
CCTAAAGTAAGGTCAGGTTG+TGG 0.573037 7_2:+55021551 None:intergenic
TATGGACTTCAAGTACGTAA+AGG 0.576798 7_2:-55021470 Msa1063340:CDS
TGCTGAATATGGTGAGGAAG+TGG 0.578645 7_2:-55021705 Msa1063340:CDS
TAAGCTAGGAGGAAGGATGT+TGG 0.579391 7_2:-55021681 Msa1063340:CDS
GTGGCTTGATGTAGCGTGAA+GGG 0.582977 7_2:+55025367 None:intergenic
TTTGGAGGAGAAAATGAACT+TGG 0.587177 7_2:-55021608 Msa1063340:CDS
CCTCGCTAGAGAGGTGCTCA+AGG 0.588257 7_2:+55025271 None:intergenic
AGCGTGAAGGGATTGAGCTT+AGG 0.589231 7_2:+55025379 None:intergenic
CTCTTAGGAACCAAGCTAAG+TGG 0.594381 7_2:-55024978 Msa1063340:CDS
ATGAATAAAGGGATTATGAG+TGG 0.596665 7_2:-55020268 Msa1063340:three_prime_UTR
GAGGAAGTGGTTAAGCTAGG+AGG 0.597674 7_2:-55021692 Msa1063340:CDS
TTGGCTGGTCTTTGAGAACG+TGG 0.597772 7_2:+55025348 None:intergenic
CATGTTACTAGTTACCATAG+TGG 0.599783 7_2:-55020387 Msa1063340:three_prime_UTR
TACCACCAGGATCAGAGTGA+GGG 0.605250 7_2:+55021522 None:intergenic
CGTGGCTTGATGTAGCGTGA+AGG 0.607503 7_2:+55025366 None:intergenic
TGATGAGTTGTGCCCAAGCA+TGG 0.609188 7_2:-55025443 Msa1063340:CDS
GCTTGGTTCCTAAGAGAAGG+AGG 0.615362 7_2:+55024985 None:intergenic
TGAACTTGGTGCTTGTCTAA+GGG 0.624355 7_2:-55021594 Msa1063340:CDS
AATAATTGCTGAATATGGTG+AGG 0.626627 7_2:-55021711 Msa1063340:CDS
GGACAGGATCCTCGCTAGAG+AGG 0.627633 7_2:+55025262 None:intergenic
ATTAGGATGAAAGGACCTTG+TGG 0.628056 7_2:-55020713 Msa1063340:CDS
AGAAGAATGGTCATACCACC+AGG 0.628750 7_2:+55021509 None:intergenic
TGGATTGTAAAACATGGCCA+AGG 0.629897 7_2:+55020832 None:intergenic
AACTCTCCTAGTACTTATGA+GGG 0.634836 7_2:-55025081 Msa1063340:CDS
TCCCCTCACTCTGATCCTGG+TGG 0.643557 7_2:-55021524 Msa1063340:CDS
TCAACTTGAGTCTTTCCACA+AGG 0.643860 7_2:+55020698 None:intergenic
TGTGCTCAAGCGTGTCTCGG+AGG 0.643931 7_2:-55025229 Msa1063340:CDS
AAAACATGGCCAAGGAAACA+CGG 0.651367 7_2:+55020840 None:intergenic
ACTCTTTGGATTGTAAAACA+TGG 0.651760 7_2:+55020826 None:intergenic
AATAAAGGGATTATGAGTGG+CGG 0.652553 7_2:-55020265 Msa1063340:three_prime_UTR
ACTATGGTAACTAGTAACAT+GGG 0.659386 7_2:+55020389 None:intergenic
ACCACCAGGATCAGAGTGAG+GGG 0.667776 7_2:+55021523 None:intergenic
GGTGCTCAAGGTCGATCACG+GGG 0.668069 7_2:+55025283 None:intergenic
ATACCACCAGGATCAGAGTG+AGG 0.670895 7_2:+55021521 None:intergenic
AGGAGCTTGTGACAAAGGAG+AGG 0.679051 7_2:-55020781 Msa1063340:CDS
CCTTGAGCACCTCTCTAGCG+AGG 0.684240 7_2:-55025271 Msa1063340:CDS
TGGAAAGTGCTAAGGAAGTG+TGG 0.715629 7_2:-55025149 Msa1063340:CDS
GCTTGAGCACAGTCTCTCTG+AGG 0.718892 7_2:+55025241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAATTATTTTAAT+TGG - chr7_2:55022139-55022158 Msa1063340:intron 0.0%
!!! ATATAAAAATTAGTTCTTAA+AGG - chr7_2:55020805-55020824 Msa1063340:CDS 10.0%
!!! ATGATAAATAATTATGTTTT+AGG - chr7_2:55021133-55021152 Msa1063340:intron 10.0%
!!! TGATAAATAATTATGTTTTA+GGG - chr7_2:55021134-55021153 Msa1063340:intron 10.0%
!!! TTTTATCCTTAATTTTATTT+TGG - chr7_2:55021325-55021344 Msa1063340:intron 10.0%
!! ATTTGAACTTTAATATTAAA+AGG + chr7_2:55021367-55021386 None:intergenic 10.0%
!! ATAAATAAATAAAAACAACT+TGG - chr7_2:55023392-55023411 Msa1063340:intron 10.0%
!! TAAATAAATAAAAACAACTT+GGG - chr7_2:55023393-55023412 Msa1063340:intron 10.0%
!!! TAAAAATAATTTTATTGGTA+CGG - chr7_2:55024338-55024357 Msa1063340:intron 10.0%
!! ATTACATGATTAATTATTAT+TGG + chr7_2:55024980-55024999 None:intergenic 10.0%
!! TTTGCATATAATTAAATAAT+TGG - chr7_2:55025015-55025034 Msa1063340:CDS 10.0%
!! ATTGAAACACAAAAATAAAA+AGG + chr7_2:55020960-55020979 None:intergenic 15.0%
!!! TTTTTATTTTTGTGTTTCAA+TGG - chr7_2:55020959-55020978 Msa1063340:intron 15.0%
!!! AAAAAATTTCTCTAACTTTT+TGG + chr7_2:55021256-55021275 None:intergenic 15.0%
!! AAACCTATTAAAATTAAGTA+AGG + chr7_2:55021591-55021610 None:intergenic 15.0%
!!! AGAAGTAATTTTTTTTTGTA+GGG + chr7_2:55021620-55021639 None:intergenic 15.0%
!!! TAGAAGTAATTTTTTTTTGT+AGG + chr7_2:55021621-55021640 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr7_2:55021681-55021700 None:intergenic 15.0%
!! AAAGATAAAATAAACAAATC+TGG - chr7_2:55021810-55021829 Msa1063340:intron 15.0%
!! AATTAAACAAATTTGAATTG+AGG - chr7_2:55021936-55021955 Msa1063340:intron 15.0%
!! AGAACTATTAAAATTAAGTA+AGG - chr7_2:55022001-55022020 Msa1063340:intron 15.0%
!!! CTTAAAGATTTTAACTTTTT+AGG - chr7_2:55022198-55022217 Msa1063340:intron 15.0%
!!! ATTTTCCAAGTATTAATAAA+AGG + chr7_2:55022224-55022243 None:intergenic 15.0%
!!! ACTTGGAAAATTATTTTTTT+AGG - chr7_2:55022233-55022252 Msa1063340:intron 15.0%
!! ATAATATAGTGAAAATTAAC+CGG + chr7_2:55022822-55022841 None:intergenic 15.0%
!!! ACTTTTTTTTTTGAAAGAAT+AGG + chr7_2:55022914-55022933 None:intergenic 15.0%
!! TTCTTTCAAAAAAAAAAGTT+TGG - chr7_2:55022915-55022934 Msa1063340:intron 15.0%
!! TCTTTCAAAAAAAAAAGTTT+GGG - chr7_2:55022916-55022935 Msa1063340:intron 15.0%
!! TCGATAGTTATAAATATTAA+AGG + chr7_2:55023015-55023034 None:intergenic 15.0%
!! TATTTAATCATTTGATTACT+AGG + chr7_2:55023205-55023224 None:intergenic 15.0%
!!! CATAGTATATTTTTGAAAAT+GGG - chr7_2:55023638-55023657 Msa1063340:intron 15.0%
!!! ATAGTATATTTTTGAAAATG+GGG - chr7_2:55023639-55023658 Msa1063340:intron 15.0%
!! TAAGGAAATATATCTATATT+TGG - chr7_2:55023686-55023705 Msa1063340:intron 15.0%
!!! ATTAATAAAAAGTATTCCAA+GGG + chr7_2:55023755-55023774 None:intergenic 15.0%
!! TAAACACATATTTAGATTTA+GGG + chr7_2:55023857-55023876 None:intergenic 15.0%
!! TTAAACACATATTTAGATTT+AGG + chr7_2:55023858-55023877 None:intergenic 15.0%
!!! CACATTAAAACTTTTTTTTT+TGG + chr7_2:55024456-55024475 None:intergenic 15.0%
!! TTATGTGATATTTATGTTAT+AGG - chr7_2:55024700-55024719 Msa1063340:intron 15.0%
!!! AACTCATCATTTTTTCTTTT+GGG + chr7_2:55020170-55020189 None:intergenic 20.0%
!!! TAATGGATTATTATGATCAA+TGG + chr7_2:55020725-55020744 None:intergenic 20.0%
!! ATATTTAAGCGTTTAACTAA+TGG + chr7_2:55020742-55020761 None:intergenic 20.0%
!!! AGCTTTTAGATGAAAATATT+CGG - chr7_2:55020989-55021008 Msa1063340:intron 20.0%
!! ATTTATATCTGAGTTATGTT+TGG - chr7_2:55021225-55021244 Msa1063340:intron 20.0%
!! AAATGAGAGAATTTAAATAG+AGG - chr7_2:55021284-55021303 Msa1063340:intron 20.0%
!! AATGAGAGAATTTAAATAGA+GGG - chr7_2:55021285-55021304 Msa1063340:intron 20.0%
!! AAAGACACATGTTTAATATT+AGG - chr7_2:55021516-55021535 Msa1063340:CDS 20.0%
!! AAGACACATGTTTAATATTA+GGG - chr7_2:55021517-55021536 Msa1063340:CDS 20.0%
!!! ATTAGGGTTAAATATGTTTT+TGG - chr7_2:55021533-55021552 Msa1063340:CDS 20.0%
!!! AGTCCTTACTTAATTTTAAT+AGG - chr7_2:55021585-55021604 Msa1063340:CDS 20.0%
!!! TTAAGGGTTATATATGTTTT+TGG + chr7_2:55022059-55022078 None:intergenic 20.0%
!!! GGAAAATTATTTTTTTAGGA+AGG - chr7_2:55022237-55022256 Msa1063340:intron 20.0%
!!! TCTTTTATCGTTAGTTTTTA+TGG - chr7_2:55022380-55022399 Msa1063340:intron 20.0%
!! AAATCATTAAGTGTTAATCT+AGG - chr7_2:55022409-55022428 Msa1063340:intron 20.0%
!! TTATTGGATAAAATCAATGT+AGG + chr7_2:55022702-55022721 None:intergenic 20.0%
!!! ATTTTATCCAATAAAAGAGT+GGG - chr7_2:55022708-55022727 Msa1063340:intron 20.0%
!!! ACATATTTGTTGTTAATTGA+TGG - chr7_2:55022788-55022807 Msa1063340:intron 20.0%
!!! CATATTTGTTGTTAATTGAT+GGG - chr7_2:55022789-55022808 Msa1063340:intron 20.0%
!! CACTATATTATACTATATCA+AGG - chr7_2:55022831-55022850 Msa1063340:intron 20.0%
!! TAGAATTATATGCATAAACT+AGG - chr7_2:55022867-55022886 Msa1063340:intron 20.0%
!!! TAGGTAAGATTTTAAAAGTT+TGG - chr7_2:55022886-55022905 Msa1063340:intron 20.0%
!!! AGGTAAGATTTTAAAAGTTT+GGG - chr7_2:55022887-55022906 Msa1063340:intron 20.0%
!! TAATATTTATAACTATCGAG+TGG - chr7_2:55023016-55023035 Msa1063340:intron 20.0%
!! AATATTTATAACTATCGAGT+GGG - chr7_2:55023017-55023036 Msa1063340:intron 20.0%
!! ACAAAATACCAAATTAACAT+AGG - chr7_2:55023174-55023193 Msa1063340:intron 20.0%
!! CAAAATACCAAATTAACATA+GGG - chr7_2:55023175-55023194 Msa1063340:intron 20.0%
!! AAAATACCAAATTAACATAG+GGG - chr7_2:55023176-55023195 Msa1063340:intron 20.0%
!! GAGAAAACAAAAAAAATTAC+TGG + chr7_2:55023599-55023618 None:intergenic 20.0%
!!! GCATAGTATATTTTTGAAAA+TGG - chr7_2:55023637-55023656 Msa1063340:intron 20.0%
!! TTATCATACTTGGAAAATAT+TGG + chr7_2:55023666-55023685 None:intergenic 20.0%
!!! ATTTTCCAAGTATGATAATA+AGG - chr7_2:55023668-55023687 Msa1063340:intron 20.0%
!! TATTTCCTTATTATCATACT+TGG + chr7_2:55023676-55023695 None:intergenic 20.0%
!!! CATTAATAAAAAGTATTCCA+AGG + chr7_2:55023756-55023775 None:intergenic 20.0%
!!! CTTGGAATACTTTTTATTAA+TGG - chr7_2:55023754-55023773 Msa1063340:intron 20.0%
!! CATTTACCAAAATCAAAATA+CGG + chr7_2:55024429-55024448 None:intergenic 20.0%
!!! TATTTTGATTTTGGTAAATG+TGG - chr7_2:55024429-55024448 Msa1063340:intron 20.0%
!!! CTATAGTTTTTTTTTTCAAG+AGG + chr7_2:55024541-55024560 None:intergenic 20.0%
!! GTTATTATTTCAACAATTAG+TGG - chr7_2:55024655-55024674 Msa1063340:intron 20.0%
!!! ATGAATACAGACTTTTTATT+AGG - chr7_2:55024894-55024913 Msa1063340:intron 20.0%
!! AGGGAAAAAAAATTCAATAA+TGG - chr7_2:55025183-55025202 Msa1063340:CDS 20.0%
!!! TGGAACTTTTATATGAATAA+AGG - chr7_2:55025344-55025363 Msa1063340:CDS 20.0%
!!! GGAACTTTTATATGAATAAA+GGG - chr7_2:55025345-55025364 Msa1063340:CDS 20.0%
!!! CAACTCATCATTTTTTCTTT+TGG + chr7_2:55020171-55020190 None:intergenic 25.0%
!! ATTTTCATCTAAAAGCTAGT+AGG + chr7_2:55020986-55021005 None:intergenic 25.0%
!!! GAAAAGTTGATGGATTTTAT+TGG - chr7_2:55021175-55021194 Msa1063340:intron 25.0%
! TCTGCTCCAAAATAAAATTA+AGG + chr7_2:55021334-55021353 None:intergenic 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr7_2:55021549-55021568 Msa1063340:CDS 25.0%
!! TAGAAGTTCCCAATTTTATA+GGG + chr7_2:55021560-55021579 None:intergenic 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG + chr7_2:55021561-55021580 None:intergenic 25.0%
!! AAACAAACTTTGTTGTAACA+AGG + chr7_2:55021652-55021671 None:intergenic 25.0%
!!! TTTGCGATAATTTTTTGCAA+AGG - chr7_2:55021848-55021867 Msa1063340:intron 25.0%
!!! TGAGTGCAGAATTTTATTTT+AGG - chr7_2:55021971-55021990 Msa1063340:intron 25.0%
!!! GAGTGCAGAATTTTATTTTA+GGG - chr7_2:55021972-55021991 Msa1063340:intron 25.0%
! AAGTAAGGACTAAACTTAAA+AGG - chr7_2:55022016-55022035 Msa1063340:intron 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG - chr7_2:55022031-55022050 Msa1063340:intron 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG - chr7_2:55022032-55022051 Msa1063340:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG + chr7_2:55021549-55021568 None:intergenic 25.0%
!! TTAGGCCTTTTATTAATACT+TGG - chr7_2:55022216-55022235 Msa1063340:intron 25.0%
! AATAATCGTCGAAATGAAAT+AGG - chr7_2:55022575-55022594 Msa1063340:intron 25.0%
!! GATTTTATCCAATAAAAGAG+TGG - chr7_2:55022707-55022726 Msa1063340:intron 25.0%
! TACTATATCAAGGTCATTAA+AGG - chr7_2:55022841-55022860 Msa1063340:intron 25.0%
! ACTATATCAAGGTCATTAAA+GGG - chr7_2:55022842-55022861 Msa1063340:intron 25.0%
!! ACTTTTTGTGTTCATATTTG+AGG - chr7_2:55023276-55023295 Msa1063340:intron 25.0%
! AGGAAAATAATTGCTGAATA+TGG - chr7_2:55023908-55023927 Msa1063340:intron 25.0%
!!! TGTTGATGATAAAAGCATTA+GGG + chr7_2:55024207-55024226 None:intergenic 25.0%
!!! ATGTTGATGATAAAAGCATT+AGG + chr7_2:55024208-55024227 None:intergenic 25.0%
!! AATGCTTTTATCATCAACAT+TGG - chr7_2:55024208-55024227 Msa1063340:intron 25.0%
! CTCACATGATTAAAATTAGA+TGG - chr7_2:55024402-55024421 Msa1063340:intron 25.0%
!!! AAGTTTTAATGTGAAGTGTA+TGG - chr7_2:55024463-55024482 Msa1063340:intron 25.0%
!!! TTTTTTCAAGAGGAATGTAA+TGG + chr7_2:55024531-55024550 None:intergenic 25.0%
!!! TTTTTTCAAGAGGAATGTAA+TGG + chr7_2:55024531-55024550 None:intergenic 25.0%
!!! GGCTATAATTTTTTTTCAAG+AGG + chr7_2:55024574-55024593 None:intergenic 25.0%
! AAAAAGTCTGTATTCATCAT+AGG + chr7_2:55024891-55024910 None:intergenic 25.0%
!! AGACTTTTTATTAGGATGAA+AGG - chr7_2:55024902-55024921 Msa1063340:intron 25.0%
!! TGTTTTATCATCTCAGTTAT+TGG - chr7_2:55025148-55025167 Msa1063340:CDS 25.0%
!!! GTTTTCTTAATTTGTCCATA+TGG + chr7_2:55025476-55025495 None:intergenic 25.0%
! CATTTCTTAGTTTATCCATA+CGG + chr7_2:55025518-55025537 None:intergenic 25.0%
! ACTAAGAAATGAATGATGAT+CGG - chr7_2:55025527-55025546 Msa1063340:five_prime_UTR 25.0%
! AATTCATTCTCAAGAATGAA+TGG - chr7_2:55025554-55025573 Msa1063340:five_prime_UTR 25.0%
AAAAATAAAGAGGGATTGGA+AGG + chr7_2:55020096-55020115 None:intergenic 30.0%
! GAGAAGCACAAAAATAAAGA+GGG + chr7_2:55020105-55020124 None:intergenic 30.0%
! AGAGAAGCACAAAAATAAAG+AGG + chr7_2:55020106-55020125 None:intergenic 30.0%
!! TGTGTTTGTGTTTCACTTTT+GGG + chr7_2:55020147-55020166 None:intergenic 30.0%
!! ATCATTTTGAGTAGCAAAAG+TGG + chr7_2:55020304-55020323 None:intergenic 30.0%
TTTGCTACTCAAAATGATCA+TGG - chr7_2:55020306-55020325 Msa1063340:three_prime_UTR 30.0%
!!! AGTGAAAAAAGGTGCTATTT+TGG - chr7_2:55020584-55020603 Msa1063340:three_prime_UTR 30.0%
!!! AAAAAGGTGCTATTTTGGAT+TGG - chr7_2:55020589-55020608 Msa1063340:three_prime_UTR 30.0%
TATATTATGTGCAAACCTCA+AGG + chr7_2:55020688-55020707 None:intergenic 30.0%
TTTGACATTTGTAAAGCGAT+AGG - chr7_2:55021043-55021062 Msa1063340:intron 30.0%
! CAACACTTTTAACATGTGTA+AGG + chr7_2:55021106-55021125 None:intergenic 30.0%
!!! ATTATGTTTTAGGGTGTGTT+TGG - chr7_2:55021143-55021162 Msa1063340:intron 30.0%
GTTCAATAGAGAAAAGTTGA+TGG - chr7_2:55021165-55021184 Msa1063340:intron 30.0%
!!! TTGATGGATTTTATTGGAGA+AGG - chr7_2:55021181-55021200 Msa1063340:intron 30.0%
!!! TGATGGATTTTATTGGAGAA+GGG - chr7_2:55021182-55021201 Msa1063340:intron 30.0%
CTTTATGTCTTAGTAAGTGT+TGG + chr7_2:55021430-55021449 None:intergenic 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr7_2:55021548-55021567 Msa1063340:CDS 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr7_2:55021715-55021734 Msa1063340:CDS 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG + chr7_2:55021548-55021567 None:intergenic 30.0%
TAATCTAGGTGAAAGAAAGT+AGG - chr7_2:55022423-55022442 Msa1063340:intron 30.0%
! TTTCGACGATTATTGATTGT+CGG + chr7_2:55022569-55022588 None:intergenic 30.0%
!!! TCTAGCACTCACTTTTTTAT+TGG - chr7_2:55022620-55022639 Msa1063340:intron 30.0%
!!! CTAGCACTCACTTTTTTATT+GGG - chr7_2:55022621-55022640 Msa1063340:intron 30.0%
AAAATGAAACCCACATAAAG+TGG + chr7_2:55022667-55022686 None:intergenic 30.0%
!! TTTGTTGTTAATTGATGGGT+CGG - chr7_2:55022793-55022812 Msa1063340:intron 30.0%
CTATATCAAGGTCATTAAAG+GGG - chr7_2:55022843-55022862 Msa1063340:intron 30.0%
CTATCAAATTGTAGGTAGTT+GGG - chr7_2:55022941-55022960 Msa1063340:intron 30.0%
ATATGTGCATGTAAAACGTT+TGG - chr7_2:55023106-55023125 Msa1063340:intron 30.0%
! TTGTTAGCATGAGTTAGTTT+AGG + chr7_2:55023332-55023351 None:intergenic 30.0%
GTAAAAATCATCTAGTGCAA+TGG + chr7_2:55023435-55023454 None:intergenic 30.0%
ACACAATTGAAAGAGACTTA+TGG + chr7_2:55023515-55023534 None:intergenic 30.0%
CTCTTTCAATTGTGTAAAAG+TGG - chr7_2:55023520-55023539 Msa1063340:intron 30.0%
! GTATATATGACATTTTCCCT+TGG - chr7_2:55023736-55023755 Msa1063340:intron 30.0%
AATAATTGCTGAATATGGTG+AGG - chr7_2:55023913-55023932 Msa1063340:intron 30.0%
GATTTCCTTATGAATGCATT+TGG - chr7_2:55023998-55024017 Msa1063340:intron 30.0%
AAAATCATCAGGAAGAAGAA+TGG + chr7_2:55024131-55024150 None:intergenic 30.0%
! TAACAACTTGAAAGAGGTAT+AGG + chr7_2:55024249-55024268 None:intergenic 30.0%
ACTATGTAACAACTTGAAAG+AGG + chr7_2:55024255-55024274 None:intergenic 30.0%
ACTCTTTGGATTGTAAAACA+TGG + chr7_2:55024801-55024820 None:intergenic 30.0%
TCAATTAGCAAATCACTCTT+TGG + chr7_2:55024815-55024834 None:intergenic 30.0%
!! AAAGACTCAAGTTGAATCTT+TGG - chr7_2:55024934-55024953 Msa1063340:intron 30.0%
ATTCAATAATGGTGAGTGAT+AGG - chr7_2:55025194-55025213 Msa1063340:CDS 30.0%
TTCAATAATGGTGAGTGATA+GGG - chr7_2:55025195-55025214 Msa1063340:CDS 30.0%
ACTATGGTAACTAGTAACAT+GGG + chr7_2:55025238-55025257 None:intergenic 30.0%
ATGTTACTAGTTACCATAGT+GGG - chr7_2:55025238-55025257 Msa1063340:CDS 30.0%
CTTTCATTATCATCCACATA+AGG + chr7_2:55025282-55025301 None:intergenic 30.0%
CCACATAAGCATATTCAAAT+TGG + chr7_2:55025327-55025346 None:intergenic 30.0%
CCAATTTGAATATGCTTATG+TGG - chr7_2:55025324-55025343 Msa1063340:CDS 30.0%
ATGAATAAAGGGATTATGAG+TGG - chr7_2:55025356-55025375 Msa1063340:CDS 30.0%
! TGATGAGAACGAGAATATTT+TGG + chr7_2:55025395-55025414 None:intergenic 30.0%
GCACAAAAATAAAGAGGGAT+TGG + chr7_2:55020100-55020119 None:intergenic 35.0%
! GTGTGTTTGTGTTTCACTTT+TGG + chr7_2:55020148-55020167 None:intergenic 35.0%
! TTGAGTAGCAAAAGTGGTTT+TGG + chr7_2:55020298-55020317 None:intergenic 35.0%
! TTTTTCCAAGTGGTGAATCA+TGG - chr7_2:55020435-55020454 Msa1063340:three_prime_UTR 35.0%
! TTTTCCAAGTGGTGAATCAT+GGG - chr7_2:55020436-55020455 Msa1063340:three_prime_UTR 35.0%
AATTCTTCCTTCACTTCAAG+TGG + chr7_2:55020519-55020538 None:intergenic 35.0%
TAACTCTCCTAGTACTTATG+AGG - chr7_2:55020542-55020561 Msa1063340:three_prime_UTR 35.0%
AACTCTCCTAGTACTTATGA+GGG - chr7_2:55020543-55020562 Msa1063340:three_prime_UTR 35.0%
!! AGGTTCAAACTTCTAAAGCA+GGG + chr7_2:55022271-55022290 None:intergenic 35.0%
!! AAGGTTCAAACTTCTAAAGC+AGG + chr7_2:55022272-55022291 None:intergenic 35.0%
!! GCTTTAGAAGTTTGAACCTT+AGG - chr7_2:55022272-55022291 Msa1063340:intron 35.0%
GAGAGAATGGAATGGAAATA+GGG + chr7_2:55022301-55022320 None:intergenic 35.0%
AGAGAGAATGGAATGGAAAT+AGG + chr7_2:55022302-55022321 None:intergenic 35.0%
TATGTCTCACCACTTTATGT+GGG - chr7_2:55022655-55022674 Msa1063340:intron 35.0%
! GGGTTTCATTTTCAAAGTGT+AGG - chr7_2:55022675-55022694 Msa1063340:intron 35.0%
! TTTAGCACCCACTCTTTTAT+TGG + chr7_2:55022718-55022737 None:intergenic 35.0%
! TTTGGGACCTATCAAATTGT+AGG - chr7_2:55022933-55022952 Msa1063340:intron 35.0%
CCAACTACCTACAATTTGAT+AGG + chr7_2:55022943-55022962 None:intergenic 35.0%
CCTATCAAATTGTAGGTAGT+TGG - chr7_2:55022940-55022959 Msa1063340:intron 35.0%
ATTTATAACTATCGAGTGGG+TGG - chr7_2:55023020-55023039 Msa1063340:intron 35.0%
ACATGCACATATAGAGTGTA+GGG + chr7_2:55023098-55023117 None:intergenic 35.0%
TACATGCACATATAGAGTGT+AGG + chr7_2:55023099-55023118 None:intergenic 35.0%
TACCACTATATATGCCAGTA+TGG - chr7_2:55023133-55023152 Msa1063340:intron 35.0%
AATAGTTGTCTTAGCCATAC+TGG + chr7_2:55023150-55023169 None:intergenic 35.0%
AGGATACCCCTATGTTAATT+TGG + chr7_2:55023185-55023204 None:intergenic 35.0%
GTTACTGTTGCATGATTATG+AGG + chr7_2:55023476-55023495 None:intergenic 35.0%
CAATTGTGTAAAAGTGGTCA+TGG - chr7_2:55023526-55023545 Msa1063340:intron 35.0%
TGCACGTATATGCATGAAAT+GGG + chr7_2:55023572-55023591 None:intergenic 35.0%
AATATACTATGCTACTCGTG+AGG + chr7_2:55023629-55023648 None:intergenic 35.0%
! ATGCTTTTCATGATCTTAGC+TGG + chr7_2:55023793-55023812 None:intergenic 35.0%
GAACTGATGTCAAAAAACCT+TGG - chr7_2:55023965-55023984 Msa1063340:intron 35.0%
GGAAATCTTCTTTCAAACCA+AGG + chr7_2:55023985-55024004 None:intergenic 35.0%
TTCCTTATGAATGCATTTGG+AGG - chr7_2:55024001-55024020 Msa1063340:intron 35.0%
TTTGGAGGAGAAAATGAACT+TGG - chr7_2:55024016-55024035 Msa1063340:intron 35.0%
! CTTCCTGATGATTTTGTGTA+TGG - chr7_2:55024136-55024155 Msa1063340:intron 35.0%
AGTCCATACACAAAATCATC+AGG + chr7_2:55024142-55024161 None:intergenic 35.0%
TATGGACTTCAAGTACGTAA+AGG - chr7_2:55024154-55024173 Msa1063340:intron 35.0%
AAGTACGTAAAGGAAATGAC+TGG - chr7_2:55024164-55024183 Msa1063340:intron 35.0%
!! ATGATAAAAGCATTAGGGAC+AGG + chr7_2:55024202-55024221 None:intergenic 35.0%
!!! GATGGTCCGTATTTTGATTT+TGG - chr7_2:55024420-55024439 Msa1063340:intron 35.0%
TTATAGCCTCTTGAAGTGTA+TGG - chr7_2:55024586-55024605 Msa1063340:intron 35.0%
AATAAAAGACCGTGTTTCCT+TGG - chr7_2:55024775-55024794 Msa1063340:intron 35.0%
TTTGCTAATTGAACCTGCTA+AGG - chr7_2:55024823-55024842 Msa1063340:intron 35.0%
CTGTATTCATCATAGGTCAT+TGG + chr7_2:55024884-55024903 None:intergenic 35.0%
!! CTCATCATGTCTTTAGTTTG+AGG - chr7_2:55025071-55025090 Msa1063340:CDS 35.0%
! TATCATCTCAGTTATTGGCT+TGG - chr7_2:55025153-55025172 Msa1063340:CDS 35.0%
!! TTATTGGCTTGGTCTATTCA+GGG - chr7_2:55025164-55025183 Msa1063340:CDS 35.0%
CACTATGGTAACTAGTAACA+TGG + chr7_2:55025239-55025258 None:intergenic 35.0%
CATGTTACTAGTTACCATAG+TGG - chr7_2:55025237-55025256 Msa1063340:CDS 35.0%
GACTAAAAGCTTACCTTATG+TGG - chr7_2:55025266-55025285 Msa1063340:CDS 35.0%
AATAAAGGGATTATGAGTGG+CGG - chr7_2:55025359-55025378 Msa1063340:CDS 35.0%
TAATCCCATGATTCACCACT+TGG + chr7_2:55020443-55020462 None:intergenic 40.0%
!! TGGGATTAGTCATGAGTTGA+TGG - chr7_2:55020455-55020474 Msa1063340:three_prime_UTR 40.0%
!! TGAGTTGATGGAAAGTGCTA+AGG - chr7_2:55020467-55020486 Msa1063340:three_prime_UTR 40.0%
TAACCTTCCACTTGAAGTGA+AGG - chr7_2:55020509-55020528 Msa1063340:three_prime_UTR 40.0%
CCATAACCCTCATAAGTACT+AGG + chr7_2:55020552-55020571 None:intergenic 40.0%
CCTAGTACTTATGAGGGTTA+TGG - chr7_2:55020549-55020568 Msa1063340:three_prime_UTR 40.0%
CTTATGAGGGTTATGGTAGT+AGG - chr7_2:55020556-55020575 Msa1063340:three_prime_UTR 40.0%
! AGTAGGTTGGGAGTGAAAAA+AGG - chr7_2:55020573-55020592 Msa1063340:three_prime_UTR 40.0%
ATTGTATGCCTCCTTCTCTT+AGG - chr7_2:55020631-55020650 Msa1063340:three_prime_UTR 40.0%
! TTAGCTTGGTTCCTAAGAGA+AGG + chr7_2:55020645-55020664 None:intergenic 40.0%
AATTCCCACTTTCAGATACG+AGG - chr7_2:55021395-55021414 Msa1063340:intron 40.0%
GTTTCCTCGTATCTGAAAGT+GGG + chr7_2:55021402-55021421 None:intergenic 40.0%
!! GTCTTAGTAAGTGTTGGATC+AGG + chr7_2:55021424-55021443 None:intergenic 40.0%
!! GGTTCAAACTTCTAAAGCAG+GGG + chr7_2:55022270-55022289 None:intergenic 40.0%
AATGGAAATAGGGTGACCTA+AGG + chr7_2:55022291-55022310 None:intergenic 40.0%
CTCTTCAAGAGAGAATGGAA+TGG + chr7_2:55022309-55022328 None:intergenic 40.0%
CATTCCATTCTCTCTTGAAG+AGG - chr7_2:55022307-55022326 Msa1063340:intron 40.0%
GTATGTCTCACCACTTTATG+TGG - chr7_2:55022654-55022673 Msa1063340:intron 40.0%
! TTAATTGATGGGTCGGTAAC+CGG - chr7_2:55022800-55022819 Msa1063340:intron 40.0%
AGCCATACTGGCATATATAG+TGG + chr7_2:55023138-55023157 None:intergenic 40.0%
TTGTGTAAAAGTGGTCATGG+TGG - chr7_2:55023529-55023548 Msa1063340:intron 40.0%
GCACGTATATGCATGAAATG+GGG + chr7_2:55023571-55023590 None:intergenic 40.0%
CTGCACGTATATGCATGAAA+TGG + chr7_2:55023573-55023592 None:intergenic 40.0%
CTCCTCCAAATGCATTCATA+AGG + chr7_2:55024006-55024025 None:intergenic 40.0%
!! ATGAACTTGGTGCTTGTCTA+AGG - chr7_2:55024029-55024048 Msa1063340:intron 40.0%
!! TGAACTTGGTGCTTGTCTAA+GGG - chr7_2:55024030-55024049 Msa1063340:intron 40.0%
! CTAAAGTAAGGTCAGGTTGT+GGG + chr7_2:55024075-55024094 None:intergenic 40.0%
CACAACCTGACCTTACTTTA+GGG - chr7_2:55024074-55024093 Msa1063340:intron 40.0%
! CAACATTGGTGACCAAATTC+AGG - chr7_2:55024222-55024241 Msa1063340:intron 40.0%
! AGAGGTATAGGACCTGAATT+TGG + chr7_2:55024237-55024256 None:intergenic 40.0%
AAAACATGGCCAAGGAAACA+CGG + chr7_2:55024787-55024806 None:intergenic 40.0%
TGGATTGTAAAACATGGCCA+AGG + chr7_2:55024795-55024814 None:intergenic 40.0%
ATAGGTCATTGGTGAGTACA+AGG + chr7_2:55024873-55024892 None:intergenic 40.0%
ATTAGGATGAAAGGACCTTG+TGG - chr7_2:55024911-55024930 Msa1063340:intron 40.0%
TCAACTTGAGTCTTTCCACA+AGG + chr7_2:55024929-55024948 None:intergenic 40.0%
TGGATATGTTGCTCTTGAGT+TGG - chr7_2:55025035-55025054 Msa1063340:CDS 40.0%
GGATATGTTGCTCTTGAGTT+GGG - chr7_2:55025036-55025055 Msa1063340:CDS 40.0%
!! GTTATTGGCTTGGTCTATTC+AGG - chr7_2:55025163-55025182 Msa1063340:CDS 40.0%
! TTTTAGTCAGCATCCCACTA+TGG + chr7_2:55025254-55025273 None:intergenic 40.0%
GAGTCAACACTTGTACCATA+TGG - chr7_2:55025458-55025477 Msa1063340:exon 40.0%
! TATAGGTTCTGGCCATGCTT+GGG + chr7_2:55020196-55020215 None:intergenic 45.0%
TGGACTCGAACTATAGGTTC+TGG + chr7_2:55020207-55020226 None:intergenic 45.0%
AAGGCTTGGACTCGAACTAT+AGG + chr7_2:55020213-55020232 None:intergenic 45.0%
!!! GTAGCAAAAGTGGTTTTGGC+TGG + chr7_2:55020294-55020313 None:intergenic 45.0%
!! TGGAAAGTGCTAAGGAAGTG+TGG - chr7_2:55020475-55020494 Msa1063340:three_prime_UTR 45.0%
CTTCCTTCACTTCAAGTGGA+AGG + chr7_2:55020515-55020534 None:intergenic 45.0%
TGAGGGTTATGGTAGTAGGT+TGG - chr7_2:55020560-55020579 Msa1063340:three_prime_UTR 45.0%
GAGGGTTATGGTAGTAGGTT+GGG - chr7_2:55020561-55020580 Msa1063340:three_prime_UTR 45.0%
CTCTTAGGAACCAAGCTAAG+TGG - chr7_2:55020646-55020665 Msa1063340:three_prime_UTR 45.0%
TGTGCAAACCTCAAGGATGA+TGG + chr7_2:55020681-55020700 None:intergenic 45.0%
GGTTTCCTCGTATCTGAAAG+TGG + chr7_2:55021403-55021422 None:intergenic 45.0%
TCCATTCTCTCTTGAAGAGG+AGG - chr7_2:55022310-55022329 Msa1063340:intron 45.0%
TCCTCCTCTTCAAGAGAGAA+TGG + chr7_2:55022314-55022333 None:intergenic 45.0%
ATAACTATCGAGTGGGTGGT+AGG - chr7_2:55023024-55023043 Msa1063340:intron 45.0%
ATACTATGCTACTCGTGAGG+TGG + chr7_2:55023626-55023645 None:intergenic 45.0%
CATGATCTTAGCTGGTGACA+AGG + chr7_2:55023785-55023804 None:intergenic 45.0%
TGCTGAATATGGTGAGGAAG+TGG - chr7_2:55023919-55023938 Msa1063340:intron 45.0%
AAGTGGTTAAGCTAGGAGGA+AGG - chr7_2:55023936-55023955 Msa1063340:intron 45.0%
TAAGCTAGGAGGAAGGATGT+TGG - chr7_2:55023943-55023962 Msa1063340:intron 45.0%
! CCTAAAGTAAGGTCAGGTTG+TGG + chr7_2:55024076-55024095 None:intergenic 45.0%
CCACAACCTGACCTTACTTT+AGG - chr7_2:55024073-55024092 Msa1063340:intron 45.0%
GATAGCCCTAAAGTAAGGTC+AGG + chr7_2:55024082-55024101 None:intergenic 45.0%
AGAAGAATGGTCATACCACC+AGG + chr7_2:55024118-55024137 None:intergenic 45.0%
TGTGCACCATACACTTCAAG+AGG + chr7_2:55024595-55024614 None:intergenic 45.0%
TTTGTCACAAGCTCCTTAGC+AGG + chr7_2:55024839-55024858 None:intergenic 45.0%
TGCTAAGGAGCTTGTGACAA+AGG - chr7_2:55024838-55024857 Msa1063340:intron 45.0%
!! ATGTTGCTCTTGAGTTGGGT+AGG - chr7_2:55025040-55025059 Msa1063340:CDS 45.0%
TGAGTCACACTTGTACCGTA+TGG - chr7_2:55025500-55025519 Msa1063340:five_prime_UTR 45.0%
!!! AAATTAATTTTCAAAATATT+TGG - chr7_2:55020886-55020905 Msa1063340:CDS 5.0%
!! AATATTAGTATTAATATTAA+GGG + chr7_2:55022075-55022094 None:intergenic 5.0%
!! AAATATTAGTATTAATATTA+AGG + chr7_2:55022076-55022095 None:intergenic 5.0%
!!! ATTAATTTTTTTATGATAAT+AGG - chr7_2:55023888-55023907 Msa1063340:intron 5.0%
!!! CTAATTAAAAATAATTTTAT+TGG - chr7_2:55024333-55024352 Msa1063340:intron 5.0%
TGATGAGTTGTGCCCAAGCA+TGG - chr7_2:55020181-55020200 Msa1063340:three_prime_UTR 50.0%
! CTATAGGTTCTGGCCATGCT+TGG + chr7_2:55020197-55020216 None:intergenic 50.0%
GTCCAAGCCTTAGCTGAAAG+TGG - chr7_2:55020222-55020241 Msa1063340:three_prime_UTR 50.0%
! GCTTAGGCCACTTTCAGCTA+AGG + chr7_2:55020232-55020251 None:intergenic 50.0%
AGCGTGAAGGGATTGAGCTT+AGG + chr7_2:55020248-55020267 None:intergenic 50.0%
GTGGCTTGATGTAGCGTGAA+GGG + chr7_2:55020260-55020279 None:intergenic 50.0%
!! TTGGCTGGTCTTTGAGAACG+TGG + chr7_2:55020279-55020298 None:intergenic 50.0%
!!! GGAGTGGGGTTTTTTCCAAG+TGG - chr7_2:55020425-55020444 Msa1063340:three_prime_UTR 50.0%
GCTTGGTTCCTAAGAGAAGG+AGG + chr7_2:55020642-55020661 None:intergenic 50.0%
!! CTCAAGGATGATGGAGTTGC+AGG + chr7_2:55020672-55020691 None:intergenic 50.0%
CTGCAACTCCATCATCCTTG+AGG - chr7_2:55020670-55020689 Msa1063340:exon 50.0%
GGTGAGGAAGTGGTTAAGCT+AGG - chr7_2:55023929-55023948 Msa1063340:intron 50.0%
GAGGAAGTGGTTAAGCTAGG+AGG - chr7_2:55023932-55023951 Msa1063340:intron 50.0%
GAGGGGATAGCCCTAAAGTA+AGG + chr7_2:55024087-55024106 None:intergenic 50.0%
TACCACCAGGATCAGAGTGA+GGG + chr7_2:55024105-55024124 None:intergenic 50.0%
ATACCACCAGGATCAGAGTG+AGG + chr7_2:55024106-55024125 None:intergenic 50.0%
AGGAGCTTGTGACAAAGGAG+AGG - chr7_2:55024843-55024862 Msa1063340:intron 50.0%
GTCATTGGTGAGTACAAGGC+TGG + chr7_2:55024869-55024888 None:intergenic 50.0%
AAAGGGATTATGAGTGGCGG+TGG - chr7_2:55025362-55025381 Msa1063340:CDS 50.0%
! GGCCACTTTCAGCTAAGGCT+TGG + chr7_2:55020227-55020246 None:intergenic 55.0%
CGTGGCTTGATGTAGCGTGA+AGG + chr7_2:55020261-55020280 None:intergenic 55.0%
AGGTGCTCAAGGTCGATCAC+GGG + chr7_2:55020345-55020364 None:intergenic 55.0%
! GAGGTGCTCAAGGTCGATCA+CGG + chr7_2:55020346-55020365 None:intergenic 55.0%
! AGCACAGTCTCTCTGAGGAC+AGG + chr7_2:55020381-55020400 None:intergenic 55.0%
GCTTGAGCACAGTCTCTCTG+AGG + chr7_2:55020386-55020405 None:intergenic 55.0%
GACTGTGCTCAAGCGTGTCT+CGG - chr7_2:55020392-55020411 Msa1063340:three_prime_UTR 55.0%
GAGTTGCAGGCCACTTAGCT+TGG + chr7_2:55020659-55020678 None:intergenic 55.0%
! GGTCAGGTTGTGGGCACTTT+GGG + chr7_2:55024066-55024085 None:intergenic 55.0%
! AGGTCAGGTTGTGGGCACTT+TGG + chr7_2:55024067-55024086 None:intergenic 55.0%
CTATCCCCTCACTCTGATCC+TGG - chr7_2:55024097-55024116 Msa1063340:intron 55.0%
ACCACCAGGATCAGAGTGAG+GGG + chr7_2:55024104-55024123 None:intergenic 55.0%
GGTGCTCAAGGTCGATCACG+GGG + chr7_2:55020344-55020363 None:intergenic 60.0%
!! CCTCGCTAGAGAGGTGCTCA+AGG + chr7_2:55020356-55020375 None:intergenic 60.0%
CCTTGAGCACCTCTCTAGCG+AGG - chr7_2:55020353-55020372 Msa1063340:three_prime_UTR 60.0%
GGACAGGATCCTCGCTAGAG+AGG + chr7_2:55020365-55020384 None:intergenic 60.0%
TGTGCTCAAGCGTGTCTCGG+AGG - chr7_2:55020395-55020414 Msa1063340:three_prime_UTR 60.0%
TCCCCTCACTCTGATCCTGG+TGG - chr7_2:55024100-55024119 Msa1063340:intron 60.0%
! AGCGTGTCTCGGAGGCGTGT+CGG - chr7_2:55020403-55020422 Msa1063340:three_prime_UTR 65.0%
! GCGTGTCTCGGAGGCGTGTC+GGG - chr7_2:55020404-55020423 Msa1063340:three_prime_UTR 70.0%
! TCTCGGAGGCGTGTCGGGAG+TGG - chr7_2:55020409-55020428 Msa1063340:three_prime_UTR 70.0%
! CTCGGAGGCGTGTCGGGAGT+GGG - chr7_2:55020410-55020429 Msa1063340:three_prime_UTR 70.0%
! TCGGAGGCGTGTCGGGAGTG+GGG - chr7_2:55020411-55020430 Msa1063340:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 55020067 55025579 55020067 ID=Msa1063340;Name=Msa1063340
chr7_2 mRNA 55020067 55025579 55020067 ID=Msa1063340-mRNA-1;Parent=Msa1063340;Name=Msa1063340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=113|1|1|1|1|1|3|609|364
chr7_2 exon 55020067 55020924 55020067 ID=Msa1063340-mRNA-1:exon:10226;Parent=Msa1063340-mRNA-1
chr7_2 exon 55021403 55021736 55021403 ID=Msa1063340-mRNA-1:exon:10225;Parent=Msa1063340-mRNA-1
chr7_2 exon 55024955 55025579 55024955 ID=Msa1063340-mRNA-1:exon:10224;Parent=Msa1063340-mRNA-1
chr7_2 five_prime_UTR 55025467 55025579 55025467 ID=Msa1063340-mRNA-1:five_prime_utr;Parent=Msa1063340-mRNA-1
chr7_2 CDS 55024955 55025466 55024955 ID=Msa1063340-mRNA-1:cds;Parent=Msa1063340-mRNA-1
chr7_2 CDS 55021403 55021736 55021403 ID=Msa1063340-mRNA-1:cds;Parent=Msa1063340-mRNA-1
chr7_2 CDS 55020676 55020924 55020676 ID=Msa1063340-mRNA-1:cds;Parent=Msa1063340-mRNA-1
chr7_2 three_prime_UTR 55020067 55020675 55020067 ID=Msa1063340-mRNA-1:three_prime_utr;Parent=Msa1063340-mRNA-1
Gene Sequence

>Msa1063340

ATGATGAGTTGTGCCCAAGCATGGCCAGAACCTATAGTTCGAGTCCAAGCCTTAGCTGAAAGTGGCCTAAGCTCAATCCCTTCACGCTACATCAAGCCACGTTCTCAAAGACCAGCCAAAACCACTTTTGCTACTCAAAATGATCATGGTGATATTAACATCCCCGTGATCGACCTTGAGCACCTCTCTAGCGAGGATCCTGTCCTCAGAGAGACTGTGCTCAAGCGTGTCTCGGAGGCGTGTCGGGAGTGGGGTTTTTTCCAAGTGGTGAATCATGGGATTAGTCATGAGTTGATGGAAAGTGCTAAGGAAGTGTGGCGTGAGTTCTTTAACCTTCCACTTGAAGTGAAGGAAGAATTTGCTAACTCTCCTAGTACTTATGAGGGTTATGGTAGTAGGTTGGGAGTGAAAAAAGGTGCTATTTTGGATTGGAGTGACTACTTTTTTCTTCATTGTATGCCTCCTTCTCTTAGGAACCAAGCTAAGTGGCCTGCAACTCCATCATCCTTGAGGAAAATAATTGCTGAATATGGTGAGGAAGTGGTTAAGCTAGGAGGAAGGATGTTGGAACTGATGTCAAAAAACCTTGGTTTGAAAGAAGATTTCCTTATGAATGCATTTGGAGGAGAAAATGAACTTGGTGCTTGTCTAAGGGTGAATTTCTACCCAAAGTGCCCACAACCTGACCTTACTTTAGGGCTATCCCCTCACTCTGATCCTGGTGGTATGACCATTCTTCTTCCTGATGATTTTGTGTATGGACTTCAAGTACGTAAAGGAAATGACTGGATCACTGTTAAGCCTGTCCCTAATGCTTTTATCATCAACATTGGTGACCAAATTCAGGTGCTGAGCAATGCAATATACAAGAGTGTAGAACATAGAGTGATTGTGAACTCAATAAAAGACCGTGTTTCCTTGGCCATGTTTTACAATCCAAAGAGTGATTTGCTAATTGAACCTGCTAAGGAGCTTGTGACAAAGGAGAGGCCAGCCTTGTACTCACCAATGACCTATGATGAATACAGACTTTTTATTAGGATGAAAGGACCTTGTGGAAAGACTCAAGTTGAATCTTTGGCTTCACAAGTGTAA
Protein sequence

>Msa1063340

MMSCAQAWPEPIVRVQALAESGLSSIPSRYIKPRSQRPAKTTFATQNDHGDINIPVIDLEHLSSEDPVLRETVLKRVSEACREWGFFQVVNHGISHELMESAKEVWREFFNLPLEVKEEFANSPSTYEGYGSRLGVKKGAILDWSDYFFLHCMPPSLRNQAKWPATPSSLRKIIAEYGEEVVKLGGRMLELMSKNLGLKEDFLMNAFGGENELGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTILLPDDFVYGLQVRKGNDWITVKPVPNAFIINIGDQIQVLSNAIYKSVEHRVIVNSIKDRVSLAMFYNPKSDLLIEPAKELVTKERPALYSPMTYDEYRLFIRMKGPCGKTQVESLASQV*