AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1072010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072010 MtrunA17_Chr7g0254001 83.475 236 1 3 1 198 1 236 8.96e-133 384
Msa1072010 MtrunA17_Chr7g0254001 88.696 115 3 1 196 310 318 422 2.78e-65 211
Msa1072010 MtrunA17_Chr5g0440341 65.639 227 40 3 10 198 23 249 1.95e-99 298
Msa1072010 MtrunA17_Chr5g0440341 52.874 87 28 3 196 280 331 406 6.46e-18 83.6
Msa1072010 MtrunA17_Chr7g0259501 54.338 219 61 4 17 196 36 254 5.42e-72 228
Msa1072010 MtrunA17_Chr1g0185861 54.128 218 61 4 18 196 41 258 1.27e-69 222
Msa1072010 MtrunA17_Chr4g0002921 64.634 164 37 2 16 158 23 186 7.70e-69 218
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072010 AT3G03740.1 66.812 229 38 3 8 198 36 264 1.04e-101 306
Msa1072010 AT3G03740.1 57.692 104 27 5 198 296 349 440 9.06e-26 107
Msa1072010 AT3G43700.3 59.657 233 56 3 4 198 21 253 6.37e-94 283
Msa1072010 AT3G43700.2 59.657 233 56 3 4 198 21 253 6.44e-94 283
Msa1072010 AT3G43700.1 59.657 233 56 3 4 198 21 253 2.45e-93 283
Msa1072010 AT3G43700.1 51.724 87 31 2 196 281 338 414 9.35e-14 71.6
Msa1072010 AT5G21010.1 52.098 286 90 6 6 251 16 294 1.86e-86 265
Msa1072010 AT5G21010.1 47.191 89 34 3 196 281 331 409 4.39e-15 75.5
Msa1072010 AT3G06190.2 43.396 318 101 6 2 280 16 293 2.26e-73 228
Msa1072010 AT2G39760.4 51.502 233 74 4 4 197 10 242 9.86e-72 225
Msa1072010 AT2G39760.3 51.502 233 74 4 4 197 10 242 9.86e-72 225
Msa1072010 AT2G39760.2 51.502 233 74 4 4 197 10 242 1.18e-71 225
Msa1072010 AT2G39760.1 52.423 227 69 4 10 197 16 242 2.21e-71 226
Msa1072010 AT3G06190.3 51.082 231 75 3 2 194 16 246 3.04e-71 223
Msa1072010 AT3G06190.4 51.082 231 75 3 2 194 16 246 4.28e-71 222
Msa1072010 AT3G06190.5 51.082 231 75 3 2 194 16 246 1.88e-70 223
Msa1072010 AT3G06190.1 51.082 231 75 3 2 194 16 246 8.20e-70 222
Msa1072010 AT5G19000.1 50.685 219 69 4 17 196 32 250 2.28e-64 208
Msa1072010 AT5G19000.3 50.685 219 69 4 17 196 32 250 2.28e-64 208
Msa1072010 AT5G19000.2 48.133 241 85 5 17 217 32 272 4.27e-64 209

Find 104 sgRNAs with CRISPR-Local

Find 549 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTGCACCCAACGGTTTA+TGG 0.177780 7_2:-68931636 None:intergenic
TCTGACATTGGATCTCATTT+TGG 0.215704 7_2:+68925437 Msa1072010:CDS
TGGAAAGAGGTCAGAACTTA+TGG 0.255805 7_2:+68931184 Msa1072010:CDS
GCTTCCATTCCTTGTTAGTT+AGG 0.299694 7_2:+68931269 Msa1072010:three_prime_UTR
ACAACAATAAGTCCCCTATT+TGG 0.318709 7_2:+68931322 Msa1072010:three_prime_UTR
TTGCTTGATCAGAGTCCTAA+TGG 0.354541 7_2:+68924195 Msa1072010:CDS
TGAGATCCAATGTCAGATTC+AGG 0.359655 7_2:-68925431 None:intergenic
CCGCGATACTTAAGAGTATA+AGG 0.362399 7_2:-68924264 None:intergenic
GAATTGCTTAAGACAGTTGC+AGG 0.364544 7_2:+68931048 Msa1072010:CDS
CTGGTATTGCTTTACTTGAT+AGG 0.372875 7_2:+68931532 Msa1072010:three_prime_UTR
GGAAGAACTGCAGGCTGGTA+TGG 0.381954 7_2:-68931692 None:intergenic
TGAACCTTATGCTTTCCATT+AGG 0.387300 7_2:-68924210 None:intergenic
TTTCGTTGGGACAACTTTGA+TGG 0.406677 7_2:+68931658 Msa1072010:three_prime_UTR
CGAGGCGTCGTCCTTCCTTA+AGG 0.407563 7_2:+68925328 Msa1072010:CDS
ACCGTTTACCGTTTCTGTTA+CGG 0.412319 7_2:-68923959 None:intergenic
TCATGCACACAAGCTTGTTA+TGG 0.417093 7_2:+68925520 Msa1072010:CDS
TCTTCAAACAGTCATCCTTA+AGG 0.420565 7_2:-68925343 None:intergenic
GTTAACAATGATCGGAGTCC+AGG 0.426939 7_2:+68931225 Msa1072010:CDS
GGTCAATTTAGAGCAATCTA+TGG 0.427620 7_2:-68925396 None:intergenic
TCTCACCGCCATCAGAAACT+TGG 0.440673 7_2:-68931119 None:intergenic
TAATGACGATGACCATTGTA+TGG 0.441848 7_2:+68931479 Msa1072010:three_prime_UTR
ATCCATAAACCGTTGGGTGC+AGG 0.451554 7_2:+68931634 Msa1072010:three_prime_UTR
TACTCACTTGCAAAAGGAAT+GGG 0.453562 7_2:+68924006 Msa1072010:CDS
CTTTGTCAAGCTTCTTGCCC+TGG 0.454027 7_2:-68931243 None:intergenic
GTTACAATGGTGGCGTATCT+CGG 0.458621 7_2:-68931389 None:intergenic
TCCGTAACAGAAACGGTAAA+CGG 0.459420 7_2:+68923958 Msa1072010:CDS
CACCGTCGGTGGTTACCAAT+GGG 0.465352 7_2:+68924059 Msa1072010:CDS
AGACAACAAACTTGGGAAAA+CGG 0.467336 7_2:+68931159 Msa1072010:CDS
CAGTTTCAAATGCAGTTGAC+CGG 0.472742 7_2:-68925547 None:intergenic
AGTACATTATCATGAAGAAC+TGG 0.478754 7_2:+68931513 Msa1072010:three_prime_UTR
AAAGGCTACTCACTTGCAAA+AGG 0.489102 7_2:+68924000 Msa1072010:CDS
GAGTCCTAATGGAAAGCATA+AGG 0.490324 7_2:+68924206 Msa1072010:CDS
GATTAGATCCATAAACCGTT+GGG 0.490965 7_2:+68931628 Msa1072010:three_prime_UTR
TTCGTTGGGACAACTTTGAT+GGG 0.491122 7_2:+68931659 Msa1072010:three_prime_UTR
TCACCGTCGGTGGTTACCAA+TGG 0.494126 7_2:+68924058 Msa1072010:CDS
ACTTATTGTTGTCTCTGCAA+TGG 0.499509 7_2:-68931311 None:intergenic
GGAGCGTAAGACAACAAACT+TGG 0.501208 7_2:+68931151 Msa1072010:CDS
CTGATGGTGTTAACAATGAT+CGG 0.507201 7_2:+68931217 Msa1072010:CDS
AGCAGAAAATTGTAGACAGA+TGG 0.509800 7_2:-68926044 None:intergenic
CAGTGTTATTGTATGACACT+TGG 0.509800 7_2:+68931578 Msa1072010:three_prime_UTR
TCCCCTATTTGGATGGAGAA+GGG 0.511286 7_2:+68931333 Msa1072010:three_prime_UTR
GGAAAGAGGTCAGAACTTAT+GGG 0.512002 7_2:+68931185 Msa1072010:CDS
GAAGAACTGCAGGCTGGTAT+GGG 0.513522 7_2:-68931691 None:intergenic
TGACCGTGATGTAGTTGTTA+CGG 0.514668 7_2:+68925595 Msa1072010:CDS
CCCTATTTGGATGGAGAAGG+GGG 0.515796 7_2:+68931335 Msa1072010:three_prime_UTR
AATATTAAGGGAAGAACTGC+AGG 0.516148 7_2:-68931701 None:intergenic
GTCAGATTCAGGAACATGTA+TGG 0.516734 7_2:-68925420 None:intergenic
TGTTACGGACATGGAACCTA+AGG 0.519252 7_2:+68925610 Msa1072010:CDS
AGCAATTCTGATTGCAGCAA+CGG 0.519955 7_2:-68931033 None:intergenic
TGATTAGATCCATAAACCGT+TGG 0.522759 7_2:+68931627 Msa1072010:three_prime_UTR
TTATGGGTTAACCTTTCTGA+TGG 0.523289 7_2:+68931201 Msa1072010:CDS
CTACTCACTTGCAAAAGGAA+TGG 0.529343 7_2:+68924005 Msa1072010:CDS
TTCTCGTTCCGTAACAGAAA+CGG 0.531967 7_2:+68923951 Msa1072010:CDS
CATTGTTAACACCATCAGAA+AGG 0.533987 7_2:-68931212 None:intergenic
ATGGCGGTGAGACTAATGAT+AGG 0.534143 7_2:+68931130 Msa1072010:CDS
CAATAAGTCCCCTATTTGGA+TGG 0.544340 7_2:+68931326 Msa1072010:three_prime_UTR
TTTCAAACGTGCTCAACTCG+AGG 0.551258 7_2:+68925310 Msa1072010:CDS
TGAGCCTAACTAACAAGGAA+TGG 0.554452 7_2:-68931273 None:intergenic
GTCCCCTATTTGGATGGAGA+AGG 0.556183 7_2:+68931332 Msa1072010:three_prime_UTR
CTTGCAAAAGGAATGGGAGT+TGG 0.557765 7_2:+68924012 Msa1072010:CDS
CCCCTATTTGGATGGAGAAG+GGG 0.558138 7_2:+68931334 Msa1072010:three_prime_UTR
AGTTTCAAATGCAGTTGACC+GGG 0.561213 7_2:-68925546 None:intergenic
TTTGATCGTTCTCTTGAGAG+TGG 0.561546 7_2:+68924240 Msa1072010:CDS
ACAAGCTTGTTATGGCAGCC+CGG 0.567478 7_2:+68925528 Msa1072010:CDS
CATGTTCCTGAATCTGACAT+TGG 0.572485 7_2:+68925425 Msa1072010:CDS
TGATGTAGTTGTTACGGACA+TGG 0.576712 7_2:+68925601 Msa1072010:CDS
CCCCTTCTCCATCCAAATAG+GGG 0.577465 7_2:-68931334 None:intergenic
TGGGAAAACGGAGTGGAAAG+AGG 0.577776 7_2:+68931171 Msa1072010:CDS
GACAGTTGCAGGAGGCGAAG+AGG 0.579180 7_2:+68931059 Msa1072010:CDS
GCAGCTGTGATGCAGTCTGA+TGG 0.579745 7_2:+68930985 Msa1072010:intron
AAACTTGGGCCCACACACTT+CGG 0.579983 7_2:-68931104 None:intergenic
TCACACAAGTTCGTAATCAA+AGG 0.585618 7_2:+68923982 Msa1072010:CDS
CTCACCGCCATCAGAAACTT+GGG 0.588896 7_2:-68931118 None:intergenic
CAAACAGTCATCCTTAAGGA+AGG 0.597960 7_2:-68925339 None:intergenic
GCAATTTACTTCTACCCCGA+CGG 0.600192 7_2:+68924081 Msa1072010:CDS
TTAAGGGAAGAACTGCAGGC+TGG 0.608902 7_2:-68931697 None:intergenic
GAAGAGGAATTTAGCGGTGA+AGG 0.612837 7_2:+68931075 Msa1072010:CDS
ACCGACGGTGAAAGTCTCGC+TGG 0.614457 7_2:-68924046 None:intergenic
AAGGAAAATGCCGAAGTGTG+TGG 0.618132 7_2:+68931094 Msa1072010:CDS
TGCCCATTGGTAACCACCGA+CGG 0.620357 7_2:-68924061 None:intergenic
GGACAACTTTGATGGGTCAG+TGG 0.620930 7_2:+68931666 Msa1072010:three_prime_UTR
AGCGAGACTTTCACCGTCGG+TGG 0.626234 7_2:+68924048 Msa1072010:CDS
AGGAAAATGCCGAAGTGTGT+GGG 0.626396 7_2:+68931095 Msa1072010:CDS
ATATGATTACAAGGATTGAG+TGG 0.627108 7_2:+68931446 Msa1072010:three_prime_UTR
GTGTGGGCCCAAGTTTCTGA+TGG 0.628006 7_2:+68931111 Msa1072010:CDS
TTAACAATGATCGGAGTCCA+GGG 0.628068 7_2:+68931226 Msa1072010:CDS
GGTAGAAGTAAATTGCCCAT+TGG 0.630166 7_2:-68924074 None:intergenic
GAGCGTAAGACAACAAACTT+GGG 0.632119 7_2:+68931152 Msa1072010:CDS
ATATTTGAGCCTAACTAACA+AGG 0.632982 7_2:-68931278 None:intergenic
CAACGAAAACCTGCACCCAA+CGG 0.634092 7_2:-68931643 None:intergenic
GGAGGCGAAGAGGAATTTAG+CGG 0.646253 7_2:+68931069 Msa1072010:CDS
CCTTATACTCTTAAGTATCG+CGG 0.648643 7_2:+68924264 Msa1072010:CDS
TAGACAAGCTTTCCATACAA+TGG 0.652879 7_2:-68931491 None:intergenic
GGACGACACAACAACACCAA+CGG 0.658560 7_2:-68925375 None:intergenic
TTGCTTAAGACAGTTGCAGG+AGG 0.660695 7_2:+68931051 Msa1072010:CDS
TCGTGATGACAGAATGCTCA+TGG 0.666515 7_2:-68923923 None:intergenic
TTGAAGATAAACTGCACCGT+TGG 0.667229 7_2:+68925359 Msa1072010:CDS
AATAAACAAACTCACCAACA+AGG 0.669992 7_2:-68926072 None:intergenic
CCTATTTGGATGGAGAAGGG+GGG 0.687481 7_2:+68931336 Msa1072010:three_prime_UTR
TGGGCCCAAGTTTCTGATGG+CGG 0.690246 7_2:+68931114 Msa1072010:CDS
ACAAACTTGGGAAAACGGAG+TGG 0.690303 7_2:+68931164 Msa1072010:CDS
AGATTCAGGAACATGTATGG+TGG 0.696100 7_2:-68925417 None:intergenic
GCCAGCGAGACTTTCACCGT+CGG 0.702261 7_2:+68924045 Msa1072010:CDS
TGTCCGTAACAACTACATCA+CGG 0.703388 7_2:-68925598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATTAAATGAAGTA+TGG + chr7_2:68925112-68925131 Msa1072010:intron 10.0%
!!! ATGTAAACATATTTATATTT+TGG - chr7_2:68926218-68926237 None:intergenic 10.0%
!!! TCTTTTTTATATAATAATTG+TGG + chr7_2:68926391-68926410 Msa1072010:intron 10.0%
!! TTTACTAAAATTAGAAAAAA+TGG + chr7_2:68928294-68928313 Msa1072010:intron 10.0%
!!! AAAATTAAATGTTTTATGAA+GGG - chr7_2:68930577-68930596 None:intergenic 10.0%
!!! AAAAATTAAATGTTTTATGA+AGG - chr7_2:68930578-68930597 None:intergenic 10.0%
!! GAAAGAATATATTCTAATAT+GGG - chr7_2:68926690-68926709 None:intergenic 15.0%
!! AGAAAGAATATATTCTAATA+TGG - chr7_2:68926691-68926710 None:intergenic 15.0%
!!! CATAAAAACTAAGTTTTTTT+TGG - chr7_2:68926869-68926888 None:intergenic 15.0%
!! CTAATATTATCTTAGAATTT+CGG + chr7_2:68927825-68927844 Msa1072010:intron 15.0%
!!! TCTAATTTTAGTAAAATTGA+TGG - chr7_2:68928289-68928308 None:intergenic 15.0%
!! CAAATTAGTTATTCAATATT+TGG + chr7_2:68928536-68928555 Msa1072010:intron 15.0%
!!! TACATTTTGTTTATATTTGT+TGG - chr7_2:68928625-68928644 None:intergenic 15.0%
!!! ATAATATTGGGTAATTTTTT+GGG + chr7_2:68929126-68929145 Msa1072010:intron 15.0%
!! TATTAAGGAAAAAAAATTTG+GGG - chr7_2:68929206-68929225 None:intergenic 15.0%
!! CTATTAAGGAAAAAAAATTT+GGG - chr7_2:68929207-68929226 None:intergenic 15.0%
!! TTTAGTGTAAACATAAAAAA+AGG + chr7_2:68929369-68929388 Msa1072010:intron 15.0%
!!! GTTTTAAAATATTTCCATTT+TGG - chr7_2:68929657-68929676 None:intergenic 15.0%
!!! AAATGGAAATATTTTAAAAC+AGG + chr7_2:68929657-68929676 Msa1072010:intron 15.0%
!! AAAAAGAATATTTGATCAAA+AGG + chr7_2:68930650-68930669 Msa1072010:intron 15.0%
!!! TTTTTGATTATATGATTACA+AGG + chr7_2:68931437-68931456 Msa1072010:three_prime_UTR 15.0%
!! CTACAGAATTGAATTAAAAT+TGG - chr7_2:68924325-68924344 None:intergenic 20.0%
!!! AACAGTTTTTTAAATTTGCA+CGG - chr7_2:68924414-68924433 None:intergenic 20.0%
!! AATACATTGAATTGAATCAA+TGG + chr7_2:68924807-68924826 Msa1072010:intron 20.0%
!! GATATGATTTATGTGTAATT+AGG + chr7_2:68925200-68925219 Msa1072010:intron 20.0%
!! TGAAAACTTGAGTTTAAATT+GGG + chr7_2:68927517-68927536 Msa1072010:intron 20.0%
!! AATTATTCAGTGCTTATAAA+AGG - chr7_2:68927590-68927609 None:intergenic 20.0%
!!! TAACCAAAATTTGAAGTATT+CGG + chr7_2:68928066-68928085 Msa1072010:intron 20.0%
!! CGATGGTAAAAATATTATAT+TGG - chr7_2:68928109-68928128 None:intergenic 20.0%
!!! ATAATATTTTCGACAGAAAA+AGG - chr7_2:68928166-68928185 None:intergenic 20.0%
!!! GAATTGATTTTTAATAGAGA+AGG + chr7_2:68928360-68928379 Msa1072010:intron 20.0%
!! TCAACTAACAAAAAAATCAA+AGG - chr7_2:68928489-68928508 None:intergenic 20.0%
!!! GATTTTTTTGTTAGTTGAAT+AGG + chr7_2:68928491-68928510 Msa1072010:intron 20.0%
!! TTAGAATCAGTAAAATTTCT+CGG + chr7_2:68928673-68928692 Msa1072010:intron 20.0%
!! AATGAAATCTAGAAAAAGAA+CGG - chr7_2:68928774-68928793 None:intergenic 20.0%
!! CAAAAAATTACCCAATATTA+TGG - chr7_2:68929127-68929146 None:intergenic 20.0%
!!! CATAATATTGGGTAATTTTT+TGG + chr7_2:68929125-68929144 Msa1072010:intron 20.0%
!! CCTATTAAGGAAAAAAAATT+TGG - chr7_2:68929208-68929227 None:intergenic 20.0%
!!! CCAAATTTTTTTTCCTTAAT+AGG + chr7_2:68929205-68929224 Msa1072010:intron 20.0%
!! ATACTATTTAACAATGTTTG+TGG + chr7_2:68929261-68929280 Msa1072010:intron 20.0%
!! AAAGTTTAAAGAATTCTATG+TGG - chr7_2:68929454-68929473 None:intergenic 20.0%
!! TATAGTATGTTATAACTCTT+TGG + chr7_2:68929490-68929509 Msa1072010:intron 20.0%
!!! CATGTTCTGTTTTTTTTTTT+GGG + chr7_2:68930370-68930389 Msa1072010:intron 20.0%
!! ATGCAAAACAATGTAAAAAA+AGG + chr7_2:68931363-68931382 Msa1072010:three_prime_UTR 20.0%
!! AATCAAAAGAAAAACAACAA+TGG - chr7_2:68931419-68931438 None:intergenic 20.0%
!!! GTTGTAACTAGTTTGAATTT+TGG + chr7_2:68924350-68924369 Msa1072010:intron 25.0%
!!! ACTAGTTTGAATTTTGGATT+AGG + chr7_2:68924356-68924375 Msa1072010:intron 25.0%
!!! GATTAGAATAACTTTTTCGA+AGG - chr7_2:68924714-68924733 None:intergenic 25.0%
! ACAATTTAAATCTTGACATC+AGG - chr7_2:68924966-68924985 None:intergenic 25.0%
! TAAGAAAATCACCATGTAAT+AGG - chr7_2:68925145-68925164 None:intergenic 25.0%
!! AACATCAAAGAGTTTTTCAT+GGG - chr7_2:68925178-68925197 None:intergenic 25.0%
! AAAGTATACAACAAAATGGA+TGG - chr7_2:68925240-68925259 None:intergenic 25.0%
! TCACAAAGTATACAACAAAA+TGG - chr7_2:68925244-68925263 None:intergenic 25.0%
!!! AACTGAGTTTTTCAATAGTA+TGG + chr7_2:68925565-68925584 Msa1072010:CDS 25.0%
! GAATAAAAGATAGCTACAAA+AGG - chr7_2:68925681-68925700 None:intergenic 25.0%
! AGATAACCAAGCAAATAATA+TGG - chr7_2:68925751-68925770 None:intergenic 25.0%
! TTTACATTATACTATAGCGT+AGG + chr7_2:68926231-68926250 Msa1072010:intron 25.0%
!! TATGTCATTGGAATATTTTC+TGG + chr7_2:68926320-68926339 Msa1072010:intron 25.0%
!! ATATTTTTCCCACTACAAAA+TGG - chr7_2:68926494-68926513 None:intergenic 25.0%
!! TGTATAGAATTGAGACATTT+TGG - chr7_2:68926785-68926804 None:intergenic 25.0%
! AGGATCAAATGGTAAATAAT+AGG - chr7_2:68926812-68926831 None:intergenic 25.0%
! AAAACAAGAACGATACAATA+AGG - chr7_2:68926832-68926851 None:intergenic 25.0%
! TCATCAATGTTGTTAAATAG+CGG + chr7_2:68926999-68927018 Msa1072010:intron 25.0%
! TGAACAAATCACTATTGTTA+CGG + chr7_2:68927058-68927077 Msa1072010:intron 25.0%
!! AATGAATCTGAAAAGTATAG+AGG - chr7_2:68927281-68927300 None:intergenic 25.0%
!! TTTGTTTCTCTTCAAAGAAT+AGG + chr7_2:68927300-68927319 Msa1072010:intron 25.0%
!! CATAAAAATAACTGAGTTGA+AGG + chr7_2:68927439-68927458 Msa1072010:intron 25.0%
! CTGAAAACTTGAGTTTAAAT+TGG + chr7_2:68927516-68927535 Msa1072010:intron 25.0%
! ACTGAATAATTCATAACTCT+AGG + chr7_2:68927599-68927618 Msa1072010:intron 25.0%
! TTTATCCTAGATCCATTATT+GGG - chr7_2:68927803-68927822 None:intergenic 25.0%
! ATTATCTTAGAATTTCGGTT+TGG + chr7_2:68927830-68927849 Msa1072010:intron 25.0%
! TGTAGAACTTATAAAAGCTT+TGG - chr7_2:68927904-68927923 None:intergenic 25.0%
! GGTAGAACATTGAATTAAAT+AGG - chr7_2:68928145-68928164 None:intergenic 25.0%
! TCAATACAAAATGAAAGACA+TGG - chr7_2:68928211-68928230 None:intergenic 25.0%
!!! TTTCATTTTGTATTGAGTTG+AGG + chr7_2:68928215-68928234 Msa1072010:intron 25.0%
!! TGATTTTTAATAGAGAAGGA+TGG + chr7_2:68928364-68928383 Msa1072010:intron 25.0%
!! AAATTTTCATTTACTCTTCG+CGG - chr7_2:68928590-68928609 None:intergenic 25.0%
!!! TGATTCTAAGAAGATTTTGA+CGG - chr7_2:68928662-68928681 None:intergenic 25.0%
! ATGAAATCTAGAAAAAGAAC+GGG - chr7_2:68928773-68928792 None:intergenic 25.0%
!!! GGTAATTTTTTGGGATTTTT+TGG + chr7_2:68929135-68929154 Msa1072010:intron 25.0%
!! AGTCCTGAATAACTTTATTT+AGG + chr7_2:68929935-68929954 Msa1072010:intron 25.0%
! AGACCTAAATAAAGTTATTC+AGG - chr7_2:68929941-68929960 None:intergenic 25.0%
!! GAATAACTTTATTTAGGTCT+TGG + chr7_2:68929941-68929960 Msa1072010:intron 25.0%
! GAATACAGACATGTTAAAAA+TGG - chr7_2:68930097-68930116 None:intergenic 25.0%
! CCAAAAAAAAAAACAGAACA+TGG - chr7_2:68930372-68930391 None:intergenic 25.0%
!!! CCATGTTCTGTTTTTTTTTT+TGG + chr7_2:68930369-68930388 Msa1072010:intron 25.0%
! ATCAATTGTTATACAACTGA+GGG - chr7_2:68930932-68930951 None:intergenic 25.0%
! AATCAATTGTTATACAACTG+AGG - chr7_2:68930933-68930952 None:intergenic 25.0%
! CAAAACAATGTAAAAAAAGG+AGG + chr7_2:68931366-68931385 Msa1072010:three_prime_UTR 25.0%
CATAAGCAGAATTATCTTCT+GGG - chr7_2:68924113-68924132 None:intergenic 30.0%
ACATAAGCAGAATTATCTTC+TGG - chr7_2:68924114-68924133 None:intergenic 30.0%
! TTCAAAAAGAGCTCTAACAT+CGG - chr7_2:68924169-68924188 None:intergenic 30.0%
AACATACACTAAAGCTAGTT+GGG - chr7_2:68924529-68924548 None:intergenic 30.0%
AAACATACACTAAAGCTAGT+TGG - chr7_2:68924530-68924549 None:intergenic 30.0%
! CTTTAGTGTATGTTTTGTGT+GGG + chr7_2:68924535-68924554 Msa1072010:intron 30.0%
TTTCAGTAAAAGCTACACTT+TGG - chr7_2:68924595-68924614 None:intergenic 30.0%
! AGTGTAGCTTTTACTGAAAT+TGG + chr7_2:68924596-68924615 Msa1072010:intron 30.0%
!!! TATGCGGTTTTATTATGACA+GGG + chr7_2:68924659-68924678 Msa1072010:intron 30.0%
!! GTTTTATTATGACAGGGTTT+GGG + chr7_2:68924665-68924684 Msa1072010:intron 30.0%
! CTAATCTAAAGTCAGTTTGT+TGG + chr7_2:68924728-68924747 Msa1072010:intron 30.0%
AGGACACAATACATCTTAAT+TGG - chr7_2:68924763-68924782 None:intergenic 30.0%
TGTTAACTCGCTATAATTCA+AGG - chr7_2:68924783-68924802 None:intergenic 30.0%
AAATTGTACTATGTGCTACA+TGG + chr7_2:68924979-68924998 Msa1072010:intron 30.0%
AGAATAAACATATGTCCAGA+AGG - chr7_2:68925079-68925098 None:intergenic 30.0%
!! ATGGCTTTAATCCTATTACA+TGG + chr7_2:68925131-68925150 Msa1072010:intron 30.0%
! CAACATCAAAGAGTTTTTCA+TGG - chr7_2:68925179-68925198 None:intergenic 30.0%
!! TGAGTTTTTCAATAGTATGG+AGG + chr7_2:68925568-68925587 Msa1072010:CDS 30.0%
AAAAGATAGCTACAAAAGGA+CGG - chr7_2:68925677-68925696 None:intergenic 30.0%
AGTGTTCCATATTATTTGCT+TGG + chr7_2:68925742-68925761 Msa1072010:intron 30.0%
GCAAATGTTTCAGATATTGA+AGG - chr7_2:68925878-68925897 None:intergenic 30.0%
AATAAACAAACTCACCAACA+AGG - chr7_2:68926075-68926094 None:intergenic 30.0%
TCGATATACTGTAAGTTCAA+AGG - chr7_2:68926120-68926139 None:intergenic 30.0%
!! TATCTGAGTCATTTTATGTC+AGG + chr7_2:68926152-68926171 Msa1072010:intron 30.0%
TTATACTATAGCGTAGGAAA+TGG + chr7_2:68926237-68926256 Msa1072010:intron 30.0%
TCTTGTGTTACATATGTCAT+TGG + chr7_2:68926308-68926327 Msa1072010:intron 30.0%
CATTATCAAACCATATAGCT+AGG - chr7_2:68926346-68926365 None:intergenic 30.0%
CTAGCTATATGGTTTGATAA+TGG + chr7_2:68926344-68926363 Msa1072010:intron 30.0%
CTACAAAATGGATCAAGATA+TGG - chr7_2:68926482-68926501 None:intergenic 30.0%
! TATCTTGATCCATTTTGTAG+TGG + chr7_2:68926482-68926501 Msa1072010:intron 30.0%
! ATCTTGATCCATTTTGTAGT+GGG + chr7_2:68926483-68926502 Msa1072010:intron 30.0%
TAGTGGGAAAAATATTGCAT+AGG + chr7_2:68926499-68926518 Msa1072010:intron 30.0%
TTCTATACATTTGCGTGTAT+AGG - chr7_2:68926532-68926551 None:intergenic 30.0%
ATGATGTTTCTTGTGACATT+GGG - chr7_2:68926752-68926771 None:intergenic 30.0%
AATGATGTTTCTTGTGACAT+TGG - chr7_2:68926753-68926772 None:intergenic 30.0%
!!! GAATTGAGACATTTTGGAAT+AGG - chr7_2:68926779-68926798 None:intergenic 30.0%
ACGATACAATAAGGATCAAA+TGG - chr7_2:68926823-68926842 None:intergenic 30.0%
!!! ACTAAGTTTTTTTTGGACAG+TGG - chr7_2:68926862-68926881 None:intergenic 30.0%
GAACAAATCACTATTGTTAC+GGG + chr7_2:68927059-68927078 Msa1072010:intron 30.0%
! GCTATAACACTGTTTTGTAA+CGG + chr7_2:68927128-68927147 Msa1072010:intron 30.0%
TCTCTTCAAAGAATAGGTAA+AGG + chr7_2:68927306-68927325 Msa1072010:intron 30.0%
AAGTTGTACTAGAAGCTTTA+AGG + chr7_2:68927376-68927395 Msa1072010:intron 30.0%
TGAAATTGACCAGTAAGTTT+GGG - chr7_2:68927421-68927440 None:intergenic 30.0%
ATGAAATTGACCAGTAAGTT+TGG - chr7_2:68927422-68927441 None:intergenic 30.0%
TACTTCCTAGATTCATATGT+AGG + chr7_2:68927463-68927482 Msa1072010:intron 30.0%
AAATGCCTACATATGAATCT+AGG - chr7_2:68927471-68927490 None:intergenic 30.0%
TCTTACAAACCAGTTTAGTA+AGG - chr7_2:68927553-68927572 None:intergenic 30.0%
TTCAGTGCTTATAAAAGGTT+AGG - chr7_2:68927585-68927604 None:intergenic 30.0%
ATTCATAACTCTAGGTAATG+TGG + chr7_2:68927607-68927626 Msa1072010:intron 30.0%
TTCATAACTCTAGGTAATGT+GGG + chr7_2:68927608-68927627 Msa1072010:intron 30.0%
GTTTATCCTAGATCCATTAT+TGG - chr7_2:68927804-68927823 None:intergenic 30.0%
!! TTAGAATTTCGGTTTGGATT+GGG + chr7_2:68927836-68927855 Msa1072010:intron 30.0%
CTAACTAACCCGTAAAAAAT+CGG + chr7_2:68927860-68927879 Msa1072010:intron 30.0%
!!! CTTACAAACCGATTTTTTAC+GGG - chr7_2:68927871-68927890 None:intergenic 30.0%
!!! CCTTACAAACCGATTTTTTA+CGG - chr7_2:68927872-68927891 None:intergenic 30.0%
CAACTTAAATGCCACAATTA+AGG + chr7_2:68928006-68928025 Msa1072010:intron 30.0%
! GATCCGAATACTTCAAATTT+TGG - chr7_2:68928072-68928091 None:intergenic 30.0%
AATGGTGGTTAAAACAACAA+AGG + chr7_2:68928333-68928352 Msa1072010:intron 30.0%
TGGTTAAAACAACAAAGGTT+GGG + chr7_2:68928338-68928357 Msa1072010:intron 30.0%
!! TTGGAGGTTTTATAAGACTT+AGG - chr7_2:68928393-68928412 None:intergenic 30.0%
TTCAAAGTACGCAAAATTCA+AGG - chr7_2:68928438-68928457 None:intergenic 30.0%
GAAAGTTTACTTTACCTATC+TGG + chr7_2:68928455-68928474 Msa1072010:intron 30.0%
AGTAAAATTTCTCGGTGAAA+AGG + chr7_2:68928681-68928700 Msa1072010:intron 30.0%
TTCCGTAGAATACTCAAATT+GGG - chr7_2:68928722-68928741 None:intergenic 30.0%
CTATTTAACAATGTTTGTGG+TGG + chr7_2:68929264-68929283 Msa1072010:intron 30.0%
GTTTAGTAGACATGATTGAT+TGG + chr7_2:68929628-68929647 Msa1072010:intron 30.0%
TGATTGATTGGTATCCAAAA+TGG + chr7_2:68929640-68929659 Msa1072010:intron 30.0%
!! ATTTTGATGGGTACCAATAT+TGG - chr7_2:68929733-68929752 None:intergenic 30.0%
! AACACCAATATTTGACTTCA+AGG + chr7_2:68929767-68929786 Msa1072010:intron 30.0%
AGTTACAAGGGAATAAAATC+TGG - chr7_2:68930309-68930328 None:intergenic 30.0%
TCCTAACTGAAAAGTTACAA+GGG - chr7_2:68930321-68930340 None:intergenic 30.0%
CAGAACATGGTAGAATATAT+AGG - chr7_2:68930359-68930378 None:intergenic 30.0%
!!! GTTCTGTTTTTTTTTTTGGG+AGG + chr7_2:68930373-68930392 Msa1072010:intron 30.0%
!! TTTTGATGATCAACAGAACT+TGG - chr7_2:68930400-68930419 None:intergenic 30.0%
TCCTTAGACTTGAAAACAAA+GGG - chr7_2:68930463-68930482 None:intergenic 30.0%
TTCCTTAGACTTGAAAACAA+AGG - chr7_2:68930464-68930483 None:intergenic 30.0%
TAGAAGAACTTACGTATATG+AGG + chr7_2:68930506-68930525 Msa1072010:intron 30.0%
AGAAGAACTTACGTATATGA+GGG + chr7_2:68930507-68930526 Msa1072010:intron 30.0%
GCACAAATATAACCTAAACT+GGG - chr7_2:68930754-68930773 None:intergenic 30.0%
AGCACAAATATAACCTAAAC+TGG - chr7_2:68930755-68930774 None:intergenic 30.0%
!! GCACTTCCAATATTTTAAAG+TGG + chr7_2:68930823-68930842 Msa1072010:intron 30.0%
!! GATGAGCCACTTTAAAATAT+TGG - chr7_2:68930832-68930851 None:intergenic 30.0%
AAGATAAACAGATATCATCC+AGG - chr7_2:68930854-68930873 None:intergenic 30.0%
! TCTGTGATTTTCATTTTCAG+CGG + chr7_2:68930873-68930892 Msa1072010:intron 30.0%
! TTGGTCATTTCCTGATTTTT+AGG - chr7_2:68930902-68930921 None:intergenic 30.0%
ATATTTGAGCCTAACTAACA+AGG - chr7_2:68931281-68931300 None:intergenic 30.0%
!!! CAACAATGGTTTTGTTACAA+TGG - chr7_2:68931405-68931424 None:intergenic 30.0%
ATATGATTACAAGGATTGAG+TGG + chr7_2:68931446-68931465 Msa1072010:three_prime_UTR 30.0%
AGTACATTATCATGAAGAAC+TGG + chr7_2:68931513-68931532 Msa1072010:three_prime_UTR 30.0%
TCACACAAGTTCGTAATCAA+AGG + chr7_2:68923982-68924001 Msa1072010:CDS 35.0%
TACTCACTTGCAAAAGGAAT+GGG + chr7_2:68924006-68924025 Msa1072010:CDS 35.0%
TGAACCTTATGCTTTCCATT+AGG - chr7_2:68924213-68924232 None:intergenic 35.0%
! CCTTATACTCTTAAGTATCG+CGG + chr7_2:68924264-68924283 Msa1072010:CDS 35.0%
! CCATGTGGCATGATTTTATT+GGG + chr7_2:68924446-68924465 Msa1072010:intron 35.0%
! TGATTTTATTGGGCCACATA+TGG + chr7_2:68924456-68924475 Msa1072010:intron 35.0%
! CATCTCAATTTTGCCATATG+TGG - chr7_2:68924472-68924491 None:intergenic 35.0%
CATATGGCAAAATTGAGATG+TGG + chr7_2:68924472-68924491 Msa1072010:intron 35.0%
! GCTTTAGTGTATGTTTTGTG+TGG + chr7_2:68924534-68924553 Msa1072010:intron 35.0%
TGGTGAGTTTATCAAAATCG+CGG + chr7_2:68924558-68924577 Msa1072010:intron 35.0%
! AGCTTTTACTGAAATTGGAC+TGG + chr7_2:68924601-68924620 Msa1072010:intron 35.0%
ATAATAAAACCGCATACGTG+CGG - chr7_2:68924655-68924674 None:intergenic 35.0%
!!! GTATGCGGTTTTATTATGAC+AGG + chr7_2:68924658-68924677 Msa1072010:intron 35.0%
!!! GGTTTTATTATGACAGGGTT+TGG + chr7_2:68924664-68924683 Msa1072010:intron 35.0%
ACACAAAAGCAGTGTATCAT+TGG - chr7_2:68925272-68925291 None:intergenic 35.0%
!! TGATACACTGCTTTTGTGTT+AGG + chr7_2:68925273-68925292 Msa1072010:intron 35.0%
!! GATACACTGCTTTTGTGTTA+GGG + chr7_2:68925274-68925293 Msa1072010:intron 35.0%
!! ATACACTGCTTTTGTGTTAG+GGG + chr7_2:68925275-68925294 Msa1072010:intron 35.0%
TCTTCAAACAGTCATCCTTA+AGG - chr7_2:68925346-68925365 None:intergenic 35.0%
! GGTCAATTTAGAGCAATCTA+TGG - chr7_2:68925399-68925418 None:intergenic 35.0%
! TCTGACATTGGATCTCATTT+TGG + chr7_2:68925437-68925456 Msa1072010:CDS 35.0%
!! TCTGATGTTACTTTCTCTGT+TGG + chr7_2:68925485-68925504 Msa1072010:intron 35.0%
AATGACACTTTCGAGGAAAA+GGG - chr7_2:68925648-68925667 None:intergenic 35.0%
AAATGACACTTTCGAGGAAA+AGG - chr7_2:68925649-68925668 None:intergenic 35.0%
ATGTTTCAGATATTGAAGGC+AGG - chr7_2:68925874-68925893 None:intergenic 35.0%
AGCAAAATTATTAGCTGCTG+CGG + chr7_2:68925898-68925917 Msa1072010:intron 35.0%
AGATTCTGTTGCCTATATTC+TGG + chr7_2:68925985-68926004 Msa1072010:intron 35.0%
AGCAGAAAATTGTAGACAGA+TGG - chr7_2:68926047-68926066 None:intergenic 35.0%
! TTTTCTGCTGAAAACCTTGT+TGG + chr7_2:68926058-68926077 Msa1072010:CDS 35.0%
TCATTTGATAAACCAGTCCT+AGG + chr7_2:68926284-68926303 Msa1072010:intron 35.0%
!! TATTTTCTGGCCTAGCTATA+TGG + chr7_2:68926333-68926352 Msa1072010:intron 35.0%
! ATATCCTTTTCTAGACTCAG+AGG + chr7_2:68926419-68926438 Msa1072010:intron 35.0%
!! TTTATTTTCCGGGTGTTTGT+GGG + chr7_2:68926451-68926470 Msa1072010:intron 35.0%
GGGAAAAATATTGCATAGGT+TGG + chr7_2:68926503-68926522 Msa1072010:intron 35.0%
GTATTATCTCTTGACGAACT+AGG - chr7_2:68926892-68926911 None:intergenic 35.0%
! TAGTGTTGGGCTTCTTAAAT+TGG - chr7_2:68926944-68926963 None:intergenic 35.0%
CAACATTGATGAGACATAAG+TGG - chr7_2:68926991-68927010 None:intergenic 35.0%
TTGTCAAATAGCTGCTATAG+TGG + chr7_2:68927104-68927123 Msa1072010:intron 35.0%
TAATGCAGAGATGAAGTTGT+GGG - chr7_2:68927204-68927223 None:intergenic 35.0%
! CTTTTGCTAGAGAAAGATGA+AGG - chr7_2:68927233-68927252 None:intergenic 35.0%
TTTCACATGTGTTTCAGTGT+TGG + chr7_2:68927488-68927507 Msa1072010:intron 35.0%
CAGTTTAGTAAGGATGAGTT+AGG - chr7_2:68927543-68927562 None:intergenic 35.0%
CTAACTCATCCTTACTAAAC+TGG + chr7_2:68927541-68927560 Msa1072010:intron 35.0%
! TCACGTTAATTGTGGCATTT+TGG - chr7_2:68927693-68927712 None:intergenic 35.0%
!! CTTAGAATTTCGGTTTGGAT+TGG + chr7_2:68927835-68927854 Msa1072010:intron 35.0%
!!! CGATTTTTTACGGGTTAGTT+AGG - chr7_2:68927862-68927881 None:intergenic 35.0%
!! CCGTAAAAAATCGGTTTGTA+AGG + chr7_2:68927869-68927888 Msa1072010:intron 35.0%
TGGAAATTCTGCCTTAATTG+TGG - chr7_2:68928020-68928039 None:intergenic 35.0%
! TTGAAGTATTCGGATCTTCA+AGG + chr7_2:68928076-68928095 Msa1072010:intron 35.0%
TAGGAAACAAAAGTCATCGA+TGG - chr7_2:68928126-68928145 None:intergenic 35.0%
!!! CATTTTGTATTGAGTTGAGG+AGG + chr7_2:68928218-68928237 Msa1072010:intron 35.0%
GGAAAACCTAAGTTAGACAA+TGG + chr7_2:68928315-68928334 Msa1072010:intron 35.0%
AAACCTAAGTTAGACAATGG+TGG + chr7_2:68928318-68928337 Msa1072010:intron 35.0%
TAACCACCATTGTCTAACTT+AGG - chr7_2:68928324-68928343 None:intergenic 35.0%
GTGGTTAAAACAACAAAGGT+TGG + chr7_2:68928337-68928356 Msa1072010:intron 35.0%
AGGCAATCGTCTAAAAATCA+GGG - chr7_2:68928418-68928437 None:intergenic 35.0%
AAGGCAATCGTCTAAAAATC+AGG - chr7_2:68928419-68928438 None:intergenic 35.0%
!!! CAAAGGTTTTTTGTCCAGAT+AGG - chr7_2:68928472-68928491 None:intergenic 35.0%
ACCCCAATTTGAGTATTCTA+CGG + chr7_2:68928717-68928736 Msa1072010:intron 35.0%
TCCGTAGAATACTCAAATTG+GGG - chr7_2:68928721-68928740 None:intergenic 35.0%
CTTCCGTAGAATACTCAAAT+TGG - chr7_2:68928723-68928742 None:intergenic 35.0%
TTTCATTATACGTCACAAGC+AGG + chr7_2:68928787-68928806 Msa1072010:intron 35.0%
ACGAAGTCGAAGTTATTCTT+TGG + chr7_2:68928968-68928987 Msa1072010:intron 35.0%
CGAAGTCGAAGTTATTCTTT+GGG + chr7_2:68928969-68928988 Msa1072010:intron 35.0%
! GTTCTAAACTCACATGAAGA+AGG + chr7_2:68928993-68929012 Msa1072010:intron 35.0%
GAAGTGAAGAAACAGATAGA+TGG + chr7_2:68929020-68929039 Msa1072010:intron 35.0%
AACAGATAGATGGATCTGTT+TGG + chr7_2:68929030-68929049 Msa1072010:intron 35.0%
ACAGATAGATGGATCTGTTT+GGG + chr7_2:68929031-68929050 Msa1072010:intron 35.0%
!!! ATTTTTTGGCATTCAGTCAG+TGG + chr7_2:68929149-68929168 Msa1072010:intron 35.0%
ATGAGTCAGACTTGCAAATT+TGG + chr7_2:68929547-68929566 Msa1072010:intron 35.0%
AACAGGAGTGAATTCTTGAT+TGG + chr7_2:68929674-68929693 Msa1072010:intron 35.0%
!! GTCGACGATTCAATTTTGAT+GGG - chr7_2:68929702-68929721 None:intergenic 35.0%
! AGTCGACGATTCAATTTTGA+TGG - chr7_2:68929703-68929722 None:intergenic 35.0%
!!! GTTTCTCGTGTCATTTTGAT+GGG - chr7_2:68929745-68929764 None:intergenic 35.0%
!!! TGTTTCTCGTGTCATTTTGA+TGG - chr7_2:68929746-68929765 None:intergenic 35.0%
AATCCCTACAACTCTAATGA+CGG - chr7_2:68929793-68929812 None:intergenic 35.0%
!! TGTTAGCTTTCAAATAGCAC+CGG + chr7_2:68929815-68929834 Msa1072010:intron 35.0%
!!! GGTTTATGCTTTTAGCTTCA+TGG + chr7_2:68929885-68929904 Msa1072010:intron 35.0%
!!! ATGGCTTTTGTGCTATTTCT+GGG + chr7_2:68929904-68929923 Msa1072010:intron 35.0%
! TCAAATTGACTTTACACTCC+AGG + chr7_2:68930008-68930027 Msa1072010:intron 35.0%
! CAAATTGACTTTACACTCCA+GGG + chr7_2:68930009-68930028 Msa1072010:intron 35.0%
CAAGCTGAAAATCAAAGTGA+TGG - chr7_2:68930150-68930169 None:intergenic 35.0%
!! ACTTTGATTTTCAGCTTGAC+AGG + chr7_2:68930152-68930171 Msa1072010:intron 35.0%
! TCCCTTGTAACTTTTCAGTT+AGG + chr7_2:68930317-68930336 Msa1072010:intron 35.0%
GTCCTAACTGAAAAGTTACA+AGG - chr7_2:68930322-68930341 None:intergenic 35.0%
AAACAAAGGGAAGAAAGAAG+CGG - chr7_2:68930450-68930469 None:intergenic 35.0%
!!! TCCCTTTGTTTTCAAGTCTA+AGG + chr7_2:68930459-68930478 Msa1072010:intron 35.0%
AACATTCTTTCTTCCGTTTC+TGG - chr7_2:68930721-68930740 None:intergenic 35.0%
CAAATATAACCTAAACTGGG+TGG - chr7_2:68930751-68930770 None:intergenic 35.0%
!!! TATTTTAAAGTGGCTCATCC+TGG + chr7_2:68930833-68930852 Msa1072010:intron 35.0%
AGACAACAAACTTGGGAAAA+CGG + chr7_2:68931159-68931178 Msa1072010:CDS 35.0%
! TTATGGGTTAACCTTTCTGA+TGG + chr7_2:68931201-68931220 Msa1072010:CDS 35.0%
CATTGTTAACACCATCAGAA+AGG - chr7_2:68931215-68931234 None:intergenic 35.0%
! CTGATGGTGTTAACAATGAT+CGG + chr7_2:68931217-68931236 Msa1072010:CDS 35.0%
ACTTATTGTTGTCTCTGCAA+TGG - chr7_2:68931314-68931333 None:intergenic 35.0%
ACAACAATAAGTCCCCTATT+TGG + chr7_2:68931322-68931341 Msa1072010:three_prime_UTR 35.0%
!!! CAATGGTTTTGTTACAATGG+TGG - chr7_2:68931402-68931421 None:intergenic 35.0%
TAATGACGATGACCATTGTA+TGG + chr7_2:68931479-68931498 Msa1072010:three_prime_UTR 35.0%
TAGACAAGCTTTCCATACAA+TGG - chr7_2:68931494-68931513 None:intergenic 35.0%
CTGGTATTGCTTTACTTGAT+AGG + chr7_2:68931532-68931551 Msa1072010:three_prime_UTR 35.0%
! CAGTGTTATTGTATGACACT+TGG + chr7_2:68931578-68931597 Msa1072010:three_prime_UTR 35.0%
TGATTAGATCCATAAACCGT+TGG + chr7_2:68931627-68931646 Msa1072010:three_prime_UTR 35.0%
GATTAGATCCATAAACCGTT+GGG + chr7_2:68931628-68931647 Msa1072010:three_prime_UTR 35.0%
TTCTCGTTCCGTAACAGAAA+CGG + chr7_2:68923951-68923970 Msa1072010:CDS 40.0%
TCCGTAACAGAAACGGTAAA+CGG + chr7_2:68923958-68923977 Msa1072010:CDS 40.0%
ACCGTTTACCGTTTCTGTTA+CGG - chr7_2:68923962-68923981 None:intergenic 40.0%
AAAGGCTACTCACTTGCAAA+AGG + chr7_2:68924000-68924019 Msa1072010:CDS 40.0%
CTACTCACTTGCAAAAGGAA+TGG + chr7_2:68924005-68924024 Msa1072010:CDS 40.0%
GGTAGAAGTAAATTGCCCAT+TGG - chr7_2:68924077-68924096 None:intergenic 40.0%
! ATCTTCTGGGTTTTTACCGT+CGG - chr7_2:68924100-68924119 None:intergenic 40.0%
TTGCTTGATCAGAGTCCTAA+TGG + chr7_2:68924195-68924214 Msa1072010:CDS 40.0%
! GAGTCCTAATGGAAAGCATA+AGG + chr7_2:68924206-68924225 Msa1072010:CDS 40.0%
TTTGATCGTTCTCTTGAGAG+TGG + chr7_2:68924240-68924259 Msa1072010:CDS 40.0%
! CCGCGATACTTAAGAGTATA+AGG - chr7_2:68924267-68924286 None:intergenic 40.0%
!!! GTTGCTTTTATTGTGCCATG+TGG + chr7_2:68924431-68924450 Msa1072010:intron 40.0%
! GCCATGTGGCATGATTTTAT+TGG + chr7_2:68924445-68924464 Msa1072010:intron 40.0%
CCCAATAAAATCATGCCACA+TGG - chr7_2:68924449-68924468 None:intergenic 40.0%
ATGGCAAAATTGAGATGTGG+AGG + chr7_2:68924475-68924494 Msa1072010:intron 40.0%
! TAGTGTATGTTTTGTGTGGG+TGG + chr7_2:68924538-68924557 Msa1072010:intron 40.0%
TGAGTTTATCAAAATCGCGG+TGG + chr7_2:68924561-68924580 Msa1072010:intron 40.0%
! CTGTGAAAAGTATACAAGCG+AGG - chr7_2:68924914-68924933 None:intergenic 40.0%
! TCCATCGAGTTATTTCCTTC+TGG + chr7_2:68925061-68925080 Msa1072010:intron 40.0%
TCCAGAAGGAAATAACTCGA+TGG - chr7_2:68925065-68925084 None:intergenic 40.0%
!! TACACTGCTTTTGTGTTAGG+GGG + chr7_2:68925276-68925295 Msa1072010:intron 40.0%
! TTTGTGTTAGGGGGTATAAG+CGG + chr7_2:68925285-68925304 Msa1072010:intron 40.0%
CAAACAGTCATCCTTAAGGA+AGG - chr7_2:68925342-68925361 None:intergenic 40.0%
TTGAAGATAAACTGCACCGT+TGG + chr7_2:68925359-68925378 Msa1072010:CDS 40.0%
AGATTCAGGAACATGTATGG+TGG - chr7_2:68925420-68925439 None:intergenic 40.0%
GTCAGATTCAGGAACATGTA+TGG - chr7_2:68925423-68925442 None:intergenic 40.0%
CATGTTCCTGAATCTGACAT+TGG + chr7_2:68925425-68925444 Msa1072010:CDS 40.0%
TGAGATCCAATGTCAGATTC+AGG - chr7_2:68925434-68925453 None:intergenic 40.0%
ATGCTGTTAGAGAATGAGGA+AGG + chr7_2:68925461-68925480 Msa1072010:intron 40.0%
!! GATGTTACTTTCTCTGTTGG+CGG + chr7_2:68925488-68925507 Msa1072010:intron 40.0%
!! TCATGCACACAAGCTTGTTA+TGG + chr7_2:68925520-68925539 Msa1072010:CDS 40.0%
AGTTTCAAATGCAGTTGACC+GGG - chr7_2:68925549-68925568 None:intergenic 40.0%
CAGTTTCAAATGCAGTTGAC+CGG - chr7_2:68925550-68925569 None:intergenic 40.0%
TGACCGTGATGTAGTTGTTA+CGG + chr7_2:68925595-68925614 Msa1072010:CDS 40.0%
TGTCCGTAACAACTACATCA+CGG - chr7_2:68925601-68925620 None:intergenic 40.0%
TGATGTAGTTGTTACGGACA+TGG + chr7_2:68925601-68925620 Msa1072010:CDS 40.0%
! CATGGAACCTAAGGTTTTCA+AGG + chr7_2:68925619-68925638 Msa1072010:intron 40.0%
CTTGAGTTCTATTGTTGAGC+AGG + chr7_2:68925778-68925797 Msa1072010:intron 40.0%
ATCAGCAAGAGCCAGAATAT+AGG - chr7_2:68925999-68926018 None:intergenic 40.0%
! GGAGCTGACTATACTTTTGT+GGG - chr7_2:68926099-68926118 None:intergenic 40.0%
! AGGAGCTGACTATACTTTTG+TGG - chr7_2:68926100-68926119 None:intergenic 40.0%
CATATGTAACACAAGAGCCT+AGG - chr7_2:68926304-68926323 None:intergenic 40.0%
!!! GGCAGACGATCTTTATTTTC+CGG + chr7_2:68926440-68926459 Msa1072010:intron 40.0%
!!! GCAGACGATCTTTATTTTCC+GGG + chr7_2:68926441-68926460 Msa1072010:intron 40.0%
!!! CTTTATTTTCCGGGTGTTTG+TGG + chr7_2:68926450-68926469 Msa1072010:intron 40.0%
GTTTCTTGTGACATTGGGTT+GGG - chr7_2:68926747-68926766 None:intergenic 40.0%
TGTTTCTTGTGACATTGGGT+TGG - chr7_2:68926748-68926767 None:intergenic 40.0%
! ATCCGCTTGATGATAGTGTT+GGG - chr7_2:68926957-68926976 None:intergenic 40.0%
TGATGAGACATAAGTGGAGA+AGG - chr7_2:68926985-68927004 None:intergenic 40.0%
TACGCACTATAGCATCACTA+TGG - chr7_2:68927025-68927044 None:intergenic 40.0%
GGACACAGTATGTTCAATTG+TGG - chr7_2:68927183-68927202 None:intergenic 40.0%
CTAATGCAGAGATGAAGTTG+TGG - chr7_2:68927205-68927224 None:intergenic 40.0%
CTCTAGCAAAAGTCAAGTGT+TGG + chr7_2:68927241-68927260 Msa1072010:intron 40.0%
AACTCCTCAACTCATCTCAA+TGG + chr7_2:68927640-68927659 Msa1072010:intron 40.0%
ATGCCACAATTAACGTGACT+AGG + chr7_2:68927695-68927714 Msa1072010:intron 40.0%
TGCCACAATTAACGTGACTA+GGG + chr7_2:68927696-68927715 Msa1072010:intron 40.0%
TGGAAATTCTGCCTTGATTG+CGG - chr7_2:68927727-68927746 None:intergenic 40.0%
ATCCAAGGACTTGAGCATAA+CGG - chr7_2:68927756-68927775 None:intergenic 40.0%
TTTGCTACACTCTAGATCCA+AGG - chr7_2:68927771-68927790 None:intergenic 40.0%
! GATCTAGAGTGTAGCAAATG+CGG + chr7_2:68927773-68927792 Msa1072010:intron 40.0%
! ATCTAGAGTGTAGCAAATGC+GGG + chr7_2:68927774-68927793 Msa1072010:intron 40.0%
TCTACATAAGTCAGATCGCT+AGG + chr7_2:68927918-68927937 Msa1072010:intron 40.0%
!! TCTAAAAATCAGGGTGTTGG+AGG - chr7_2:68928409-68928428 None:intergenic 40.0%
TCGTCTAAAAATCAGGGTGT+TGG - chr7_2:68928412-68928431 None:intergenic 40.0%
TTCTACGGAAGACTTTGTCA+AGG + chr7_2:68928732-68928751 Msa1072010:intron 40.0%
CTTCAAGGCATGTAACAACT+TGG + chr7_2:68928850-68928869 Msa1072010:intron 40.0%
CCATATACAGAGCAATTCTG+AGG - chr7_2:68928935-68928954 None:intergenic 40.0%
CCTCAGAATTGCTCTGTATA+TGG + chr7_2:68928932-68928951 Msa1072010:intron 40.0%
GAATTGCTCTGTATATGGCT+CGG + chr7_2:68928937-68928956 Msa1072010:intron 40.0%
AATTGCTCTGTATATGGCTC+GGG + chr7_2:68928938-68928957 Msa1072010:intron 40.0%
TTGCAGCACTGCCATAATAT+TGG + chr7_2:68929113-68929132 Msa1072010:intron 40.0%
TGCAGCACTGCCATAATATT+GGG + chr7_2:68929114-68929133 Msa1072010:intron 40.0%
AAGAATTCTATGTGGTGCAG+TGG - chr7_2:68929446-68929465 None:intergenic 40.0%
AAGTCTGACTCATTACAGTG+GGG - chr7_2:68929540-68929559 None:intergenic 40.0%
CAAGTCTGACTCATTACAGT+GGG - chr7_2:68929541-68929560 None:intergenic 40.0%
! GTGAACTGTGTAAACTTGCT+AGG - chr7_2:68929589-68929608 None:intergenic 40.0%
TCGACTTCCAACACCAATAT+TGG + chr7_2:68929717-68929736 Msa1072010:intron 40.0%
ATGGGTACCAATATTGGTGT+TGG - chr7_2:68929727-68929746 None:intergenic 40.0%
ACGGCCTTGAAGTCAAATAT+TGG - chr7_2:68929774-68929793 None:intergenic 40.0%
ACTCATCTATGGGGTTGAAA+GGG - chr7_2:68929849-68929868 None:intergenic 40.0%
CACTATACGACTCATCTATG+GGG - chr7_2:68929858-68929877 None:intergenic 40.0%
CCACTATACGACTCATCTAT+GGG - chr7_2:68929859-68929878 None:intergenic 40.0%
!!! CATGGCTTTTGTGCTATTTC+TGG + chr7_2:68929903-68929922 Msa1072010:intron 40.0%
ATGTCTTCATTAGTGTGCCT+AGG + chr7_2:68930032-68930051 Msa1072010:intron 40.0%
TACGTATATGAGGGAGTAAG+AGG + chr7_2:68930516-68930535 Msa1072010:intron 40.0%
TTCAATGACCTGTTTGTCTC+AGG + chr7_2:68930675-68930694 Msa1072010:intron 40.0%
TCAGGCAGTAGTCGTATAAA+TGG + chr7_2:68930693-68930712 Msa1072010:intron 40.0%
CAGGCAGTAGTCGTATAAAT+GGG + chr7_2:68930694-68930713 Msa1072010:intron 40.0%
CGTATAAATGGGTCCAGAAA+CGG + chr7_2:68930705-68930724 Msa1072010:intron 40.0%
AGCAATTCTGATTGCAGCAA+CGG - chr7_2:68931036-68931055 None:intergenic 40.0%
GAATTGCTTAAGACAGTTGC+AGG + chr7_2:68931048-68931067 Msa1072010:CDS 40.0%
GAGCGTAAGACAACAAACTT+GGG + chr7_2:68931152-68931171 Msa1072010:CDS 40.0%
TGGAAAGAGGTCAGAACTTA+TGG + chr7_2:68931184-68931203 Msa1072010:CDS 40.0%
GGAAAGAGGTCAGAACTTAT+GGG + chr7_2:68931185-68931204 Msa1072010:CDS 40.0%
TTAACAATGATCGGAGTCCA+GGG + chr7_2:68931226-68931245 Msa1072010:CDS 40.0%
GCTTCCATTCCTTGTTAGTT+AGG + chr7_2:68931269-68931288 Msa1072010:three_prime_UTR 40.0%
TGAGCCTAACTAACAAGGAA+TGG - chr7_2:68931276-68931295 None:intergenic 40.0%
CAATAAGTCCCCTATTTGGA+TGG + chr7_2:68931326-68931345 Msa1072010:three_prime_UTR 40.0%
TTTCGTTGGGACAACTTTGA+TGG + chr7_2:68931658-68931677 Msa1072010:three_prime_UTR 40.0%
TTCGTTGGGACAACTTTGAT+GGG + chr7_2:68931659-68931678 Msa1072010:three_prime_UTR 40.0%
CTTGCAAAAGGAATGGGAGT+TGG + chr7_2:68924012-68924031 Msa1072010:CDS 45.0%
GCAATTTACTTCTACCCCGA+CGG + chr7_2:68924081-68924100 Msa1072010:CDS 45.0%
! TCTTCTGGGTTTTTACCGTC+GGG - chr7_2:68924099-68924118 None:intergenic 45.0%
! AGCTCTAACATCGGTACCTT+CGG - chr7_2:68924160-68924179 None:intergenic 45.0%
! ACCAAGCCTTATCCCACTAA+GGG - chr7_2:68924846-68924865 None:intergenic 45.0%
! AACCAAGCCTTATCCCACTA+AGG - chr7_2:68924847-68924866 None:intergenic 45.0%
TTTCAAACGTGCTCAACTCG+AGG + chr7_2:68925310-68925329 Msa1072010:CDS 45.0%
TGGCATGCTGTTAGAGAATG+AGG + chr7_2:68925457-68925476 Msa1072010:intron 45.0%
TGTTACGGACATGGAACCTA+AGG + chr7_2:68925610-68925629 Msa1072010:CDS 45.0%
AGGGCTACCTTGAAAACCTT+AGG - chr7_2:68925629-68925648 None:intergenic 45.0%
GAGGGAAAATGACACTTTCG+AGG - chr7_2:68925655-68925674 None:intergenic 45.0%
GATAGCTACAAAAGGACGGA+GGG - chr7_2:68925673-68925692 None:intergenic 45.0%
AGATAGCTACAAAAGGACGG+AGG - chr7_2:68925674-68925693 None:intergenic 45.0%
AAGCATTTCGACATGGAGCA+TGG - chr7_2:68925703-68925722 None:intergenic 45.0%
TCAGCACAAGCATTTCGACA+TGG - chr7_2:68925710-68925729 None:intergenic 45.0%
TCGCACATCAGCTTAAGTCT+AGG - chr7_2:68925938-68925957 None:intergenic 45.0%
! ACAGATGGACTTTAACTCCG+TGG - chr7_2:68926032-68926051 None:intergenic 45.0%
TAGCGTAGGAAATGGAAGAG+TGG + chr7_2:68926245-68926264 Msa1072010:intron 45.0%
TCTGCCTCTGAGTCTAGAAA+AGG - chr7_2:68926426-68926445 None:intergenic 45.0%
AGCCCAACACTATCATCAAG+CGG + chr7_2:68926952-68926971 Msa1072010:intron 45.0%
! GATCCGCTTGATGATAGTGT+TGG - chr7_2:68926958-68926977 None:intergenic 45.0%
CAGTGAGAACTGAGAGGAAT+TGG - chr7_2:68927342-68927361 None:intergenic 45.0%
!! GAAGCTTTAAGGCCAGTCTT+TGG + chr7_2:68927387-68927406 Msa1072010:intron 45.0%
! TGACCAGTAAGTTTGGGACA+CGG - chr7_2:68927415-68927434 None:intergenic 45.0%
TCCTCAACTCATCTCAATGG+TGG + chr7_2:68927643-68927662 Msa1072010:intron 45.0%
ACCACCATTGAGATGAGTTG+AGG - chr7_2:68927647-68927666 None:intergenic 45.0%
GCCACAATTAACGTGACTAG+GGG + chr7_2:68927697-68927716 Msa1072010:intron 45.0%
TCCAAGGACTTGAGCATAAC+GGG - chr7_2:68927755-68927774 None:intergenic 45.0%
AAATGCGGGAAGCCCAATAA+TGG + chr7_2:68927788-68927807 Msa1072010:intron 45.0%
!! GGAAGCCCAATAATGGATCT+AGG + chr7_2:68927795-68927814 Msa1072010:intron 45.0%
GTATTCGGATCTTCAAGGAG+AGG + chr7_2:68928081-68928100 Msa1072010:intron 45.0%
AGTTGAGGAGGTCACAACTA+CGG + chr7_2:68928230-68928249 Msa1072010:intron 45.0%
ACGGAAGACTTTGTCAAGGA+TGG + chr7_2:68928736-68928755 Msa1072010:intron 45.0%
AAGAGTCAAGACCTGTGCTT+AGG + chr7_2:68928823-68928842 Msa1072010:intron 45.0%
CTTGAAGTAGACCTAAGCAC+AGG - chr7_2:68928837-68928856 None:intergenic 45.0%
CTGTGCTTAGGTCTACTTCA+AGG + chr7_2:68928835-68928854 Msa1072010:intron 45.0%
GGTAAATTTAGCAGCCATGC+TGG + chr7_2:68928892-68928911 Msa1072010:intron 45.0%
! TCTGTATATGGCTCGGGAAT+GGG + chr7_2:68928944-68928963 Msa1072010:intron 45.0%
! TTTTGGCATTCAGTCAGTGG+CGG + chr7_2:68929152-68929171 Msa1072010:intron 45.0%
GCACACACACACACCTATTA+AGG - chr7_2:68929221-68929240 None:intergenic 45.0%
TGTGGTGCAGTGGTAAGATT+CGG - chr7_2:68929436-68929455 None:intergenic 45.0%
GCAAGTCTGACTCATTACAG+TGG - chr7_2:68929542-68929561 None:intergenic 45.0%
ATGTCTACTAAACTCCCACG+AGG - chr7_2:68929621-68929640 None:intergenic 45.0%
AAGGCCGTCATTAGAGTTGT+AGG + chr7_2:68929786-68929805 Msa1072010:intron 45.0%
AGGCCGTCATTAGAGTTGTA+GGG + chr7_2:68929787-68929806 Msa1072010:intron 45.0%
GACTCATCTATGGGGTTGAA+AGG - chr7_2:68929850-68929869 None:intergenic 45.0%
CCCATAGATGAGTCGTATAG+TGG + chr7_2:68929856-68929875 Msa1072010:intron 45.0%
GCCACTATACGACTCATCTA+TGG - chr7_2:68929860-68929879 None:intergenic 45.0%
GGTCTTGGTCTCTTCAATTG+TGG + chr7_2:68929956-68929975 Msa1072010:intron 45.0%
TGGTCTCTTCAATTGTGGCA+TGG + chr7_2:68929961-68929980 Msa1072010:intron 45.0%
CACACTAATGAAGACATCCC+TGG - chr7_2:68930029-68930048 None:intergenic 45.0%
TCAGCGGTTGCCTAAAAATC+AGG + chr7_2:68930889-68930908 Msa1072010:intron 45.0%
TACAACTGAGGGACACTACT+TGG - chr7_2:68930921-68930940 None:intergenic 45.0%
TTGCTTAAGACAGTTGCAGG+AGG + chr7_2:68931051-68931070 Msa1072010:CDS 45.0%
GAAGAGGAATTTAGCGGTGA+AGG + chr7_2:68931075-68931094 Msa1072010:CDS 45.0%
AAGGAAAATGCCGAAGTGTG+TGG + chr7_2:68931094-68931113 Msa1072010:CDS 45.0%
AGGAAAATGCCGAAGTGTGT+GGG + chr7_2:68931095-68931114 Msa1072010:CDS 45.0%
ATGGCGGTGAGACTAATGAT+AGG + chr7_2:68931130-68931149 Msa1072010:CDS 45.0%
GGAGCGTAAGACAACAAACT+TGG + chr7_2:68931151-68931170 Msa1072010:CDS 45.0%
ACAAACTTGGGAAAACGGAG+TGG + chr7_2:68931164-68931183 Msa1072010:CDS 45.0%
GTTAACAATGATCGGAGTCC+AGG + chr7_2:68931225-68931244 Msa1072010:CDS 45.0%
TCCCCTATTTGGATGGAGAA+GGG + chr7_2:68931333-68931352 Msa1072010:three_prime_UTR 45.0%
! GTTACAATGGTGGCGTATCT+CGG - chr7_2:68931392-68931411 None:intergenic 45.0%
!! AGAAAATTTAAAAAAAAAAA+AGG + chr7_2:68928258-68928277 Msa1072010:intron 5.0%
! CTTCTGGGTTTTTACCGTCG+GGG - chr7_2:68924098-68924117 None:intergenic 50.0%
TTCATTGCTCTCGCTTCCGA+AGG + chr7_2:68924141-68924160 Msa1072010:intron 50.0%
! TTAAGTATCGCGGCAGCATG+TGG + chr7_2:68924274-68924293 Msa1072010:intron 50.0%
ATAAAACCGCATACGTGCGG+CGG - chr7_2:68924652-68924671 None:intergenic 50.0%
TGTGACTGCGTATCCCTTAG+TGG + chr7_2:68924830-68924849 Msa1072010:intron 50.0%
GTGACTGCGTATCCCTTAGT+GGG + chr7_2:68924831-68924850 Msa1072010:intron 50.0%
GCGTATCCCTTAGTGGGATA+AGG + chr7_2:68924837-68924856 Msa1072010:intron 50.0%
TCCCTTAGTGGGATAAGGCT+TGG + chr7_2:68924842-68924861 Msa1072010:intron 50.0%
GGACGACACAACAACACCAA+CGG - chr7_2:68925378-68925397 None:intergenic 50.0%
CTTTCTCTGTTGGCGGTGAA+AGG + chr7_2:68925495-68925514 Msa1072010:intron 50.0%
!! ACAAGCTTGTTATGGCAGCC+CGG + chr7_2:68925528-68925547 Msa1072010:CDS 50.0%
TGCTGATCGCTATCATGCCA+CGG + chr7_2:68926012-68926031 Msa1072010:intron 50.0%
GTAACACAAGAGCCTAGGAC+TGG - chr7_2:68926299-68926318 None:intergenic 50.0%
TGGTTGATCCCACAAACACC+CGG - chr7_2:68926462-68926481 None:intergenic 50.0%
GTCACTTGACGAACAACGCA+TGG - chr7_2:68926914-68926933 None:intergenic 50.0%
GTCATGCAGTGAGAACTGAG+AGG - chr7_2:68927348-68927367 None:intergenic 50.0%
GAACCGTGTCCCAAACTTAC+TGG + chr7_2:68927409-68927428 Msa1072010:intron 50.0%
! CATCTCAATGGTGGTGCTAG+AGG + chr7_2:68927652-68927671 Msa1072010:intron 50.0%
GCCCCTAGTCACGTTAATTG+TGG - chr7_2:68927701-68927720 None:intergenic 50.0%
! CTTGAGCATAACGGGAGTGT+TGG - chr7_2:68927747-68927766 None:intergenic 50.0%
TCCCGTTATGCTCAAGTCCT+TGG + chr7_2:68927751-68927770 Msa1072010:intron 50.0%
AGTCAGATCGCTAGGTGATG+TGG + chr7_2:68927926-68927945 Msa1072010:intron 50.0%
GTCAGATCGCTAGGTGATGT+GGG + chr7_2:68927927-68927946 Msa1072010:intron 50.0%
ATGAGCTACGTGTGAGGGAT+TGG - chr7_2:68927959-68927978 None:intergenic 50.0%
ATCCCTCACACGTAGCTCAT+TGG + chr7_2:68927959-68927978 Msa1072010:intron 50.0%
CACCAATGAGCTACGTGTGA+GGG - chr7_2:68927964-68927983 None:intergenic 50.0%
!! ACGTAGCTCATTGGTGCTGT+TGG + chr7_2:68927968-68927987 Msa1072010:intron 50.0%
!! CGTAGCTCATTGGTGCTGTT+GGG + chr7_2:68927969-68927988 Msa1072010:intron 50.0%
AGCGTCATCAGCGTATCTGT+TGG - chr7_2:68928040-68928059 None:intergenic 50.0%
TAACAACTTGGCACCAGAGC+TGG + chr7_2:68928862-68928881 Msa1072010:intron 50.0%
AACAACTTGGCACCAGAGCT+GGG + chr7_2:68928863-68928882 Msa1072010:intron 50.0%
! CTCTGTATATGGCTCGGGAA+TGG + chr7_2:68928943-68928962 Msa1072010:intron 50.0%
! AGTCAGTGGCGGAGCATAAT+CGG + chr7_2:68929163-68929182 Msa1072010:intron 50.0%
AGCATAATCGGGACAGAGGT+TGG + chr7_2:68929175-68929194 Msa1072010:intron 50.0%
! CTGTATCTTTCGAGTCGCAG+AGG - chr7_2:68929307-68929326 None:intergenic 50.0%
CTCTGCGACTCGAAAGATAC+AGG + chr7_2:68929305-68929324 Msa1072010:intron 50.0%
CTCATTACAGTGGGGAGCTT+GGG - chr7_2:68929532-68929551 None:intergenic 50.0%
ACTCATTACAGTGGGGAGCT+TGG - chr7_2:68929533-68929552 None:intergenic 50.0%
! TTCACCTGAGTTAGCCTCGT+GGG + chr7_2:68929604-68929623 Msa1072010:intron 50.0%
GGTTGAAAGGGTCATGAGAC+CGG - chr7_2:68929837-68929856 None:intergenic 50.0%
TGAGTCGTATAGTGGCGACA+TGG + chr7_2:68929864-68929883 Msa1072010:intron 50.0%
TGACGCTGGAAACATGACCT+AGG - chr7_2:68930052-68930071 None:intergenic 50.0%
TAGGTCATGTTTCCAGCGTC+AGG + chr7_2:68930051-68930070 Msa1072010:intron 50.0%
GACTACTGCCTGAGACAAAC+AGG - chr7_2:68930686-68930705 None:intergenic 50.0%
TTTGCTCAGCCACCCAGTTT+AGG + chr7_2:68930739-68930758 Msa1072010:intron 50.0%
GGAGGCGAAGAGGAATTTAG+CGG + chr7_2:68931069-68931088 Msa1072010:CDS 50.0%
AAACTTGGGCCCACACACTT+CGG - chr7_2:68931107-68931126 None:intergenic 50.0%
CTCACCGCCATCAGAAACTT+GGG - chr7_2:68931121-68931140 None:intergenic 50.0%
TCTCACCGCCATCAGAAACT+TGG - chr7_2:68931122-68931141 None:intergenic 50.0%
TGGGAAAACGGAGTGGAAAG+AGG + chr7_2:68931171-68931190 Msa1072010:CDS 50.0%
CTTTGTCAAGCTTCTTGCCC+TGG - chr7_2:68931246-68931265 None:intergenic 50.0%
GTCCCCTATTTGGATGGAGA+AGG + chr7_2:68931332-68931351 Msa1072010:three_prime_UTR 50.0%
CCCCTTCTCCATCCAAATAG+GGG - chr7_2:68931337-68931356 None:intergenic 50.0%
CCCCTATTTGGATGGAGAAG+GGG + chr7_2:68931334-68931353 Msa1072010:three_prime_UTR 50.0%
CCCCCTTCTCCATCCAAATA+GGG - chr7_2:68931338-68931357 None:intergenic 50.0%
CCCTATTTGGATGGAGAAGG+GGG + chr7_2:68931335-68931354 Msa1072010:three_prime_UTR 50.0%
CCTATTTGGATGGAGAAGGG+GGG + chr7_2:68931336-68931355 Msa1072010:three_prime_UTR 50.0%
ATCCATAAACCGTTGGGTGC+AGG + chr7_2:68931634-68931653 Msa1072010:three_prime_UTR 50.0%
AACCTGCACCCAACGGTTTA+TGG - chr7_2:68931639-68931658 None:intergenic 50.0%
CAACGAAAACCTGCACCCAA+CGG - chr7_2:68931646-68931665 None:intergenic 50.0%
! GTTGGGTGCAGGTTTTCGTT+GGG + chr7_2:68931645-68931664 Msa1072010:three_prime_UTR 50.0%
! GGACAACTTTGATGGGTCAG+TGG + chr7_2:68931666-68931685 Msa1072010:three_prime_UTR 50.0%
TCACCGTCGGTGGTTACCAA+TGG + chr7_2:68924058-68924077 Msa1072010:CDS 55.0%
CACCGTCGGTGGTTACCAAT+GGG + chr7_2:68924059-68924078 Msa1072010:CDS 55.0%
! TGCCCATTGGTAACCACCGA+CGG - chr7_2:68924064-68924083 None:intergenic 55.0%
TAAAACCGCATACGTGCGGC+GGG - chr7_2:68924651-68924670 None:intergenic 55.0%
TGGGACACGGTTCCAAAGAC+TGG - chr7_2:68927402-68927421 None:intergenic 55.0%
GCACCAATGAGCTACGTGTG+AGG - chr7_2:68927965-68927984 None:intergenic 55.0%
GCTGTTGGGAGCTGCAATGA+AGG + chr7_2:68927983-68928002 Msa1072010:intron 55.0%
TTTACCACGTCACCCAGCTC+TGG - chr7_2:68928878-68928897 None:intergenic 55.0%
TGTGACAGTGCAGTGATGCC+AGG + chr7_2:68929062-68929081 Msa1072010:intron 55.0%
ACAGTGCAGTGATGCCAGGA+TGG + chr7_2:68929066-68929085 Msa1072010:intron 55.0%
CAGTGCAGTGATGCCAGGAT+GGG + chr7_2:68929067-68929086 Msa1072010:intron 55.0%
GTACGATTGCGATCCCATCC+TGG - chr7_2:68929083-68929102 None:intergenic 55.0%
! GTCAGTGGCGGAGCATAATC+GGG + chr7_2:68929164-68929183 Msa1072010:intron 55.0%
CAATGTTTGTGGTGGCCCAG+TGG + chr7_2:68929272-68929291 Msa1072010:intron 55.0%
! AGCTTGGGTGGATTTCGGAG+GGG - chr7_2:68929517-68929536 None:intergenic 55.0%
! GAGCTTGGGTGGATTTCGGA+GGG - chr7_2:68929518-68929537 None:intergenic 55.0%
! TGGGGAGCTTGGGTGGATTT+CGG - chr7_2:68929522-68929541 None:intergenic 55.0%
ATTACAGTGGGGAGCTTGGG+TGG - chr7_2:68929529-68929548 None:intergenic 55.0%
! GTTCACCTGAGTTAGCCTCG+TGG + chr7_2:68929603-68929622 Msa1072010:intron 55.0%
AACTCCCACGAGGCTAACTC+AGG - chr7_2:68929611-68929630 None:intergenic 55.0%
AGCGCACAAATTCCTGACGC+TGG - chr7_2:68930066-68930085 None:intergenic 55.0%
GCAGCTGTGATGCAGTCTGA+TGG + chr7_2:68930985-68931004 Msa1072010:intron 55.0%
GTGTGGGCCCAAGTTTCTGA+TGG + chr7_2:68931111-68931130 Msa1072010:CDS 55.0%
TGGGCCCAAGTTTCTGATGG+CGG + chr7_2:68931114-68931133 Msa1072010:CDS 55.0%
CCCCCCTTCTCCATCCAAAT+AGG - chr7_2:68931339-68931358 None:intergenic 55.0%
ATTTGGATGGAGAAGGGGGG+AGG + chr7_2:68931339-68931358 Msa1072010:three_prime_UTR 55.0%
! CGTTGGGTGCAGGTTTTCGT+TGG + chr7_2:68931644-68931663 Msa1072010:three_prime_UTR 55.0%
GCCAGCGAGACTTTCACCGT+CGG + chr7_2:68924045-68924064 Msa1072010:CDS 60.0%
ACCGACGGTGAAAGTCTCGC+TGG - chr7_2:68924049-68924068 None:intergenic 60.0%
AGCGAGACTTTCACCGTCGG+TGG + chr7_2:68924048-68924067 Msa1072010:CDS 60.0%
!! CGAGGCGTCGTCCTTCCTTA+AGG + chr7_2:68925328-68925347 Msa1072010:CDS 60.0%
GGTGCTAGAGGCTGCAACGA+AGG + chr7_2:68927664-68927683 Msa1072010:intron 60.0%
CTAGGGGCAGACCGCAATCA+AGG + chr7_2:68927713-68927732 Msa1072010:intron 60.0%
GCGGAGCATAATCGGGACAG+AGG + chr7_2:68929171-68929190 Msa1072010:intron 60.0%
! CAGAGGCGCGCATAACCACT+GGG - chr7_2:68929290-68929309 None:intergenic 60.0%
! GCTTGGGTGGATTTCGGAGG+GGG - chr7_2:68929516-68929535 None:intergenic 60.0%
! GGAGCTTGGGTGGATTTCGG+AGG - chr7_2:68929519-68929538 None:intergenic 60.0%
GACAGTTGCAGGAGGCGAAG+AGG + chr7_2:68931059-68931078 Msa1072010:CDS 60.0%
TTCCACCCGCCGCACGTATG+CGG + chr7_2:68924643-68924662 Msa1072010:intron 65.0%
! GCAGAGGCGCGCATAACCAC+TGG - chr7_2:68929291-68929310 None:intergenic 65.0%
AACCGCATACGTGCGGCGGG+TGG - chr7_2:68924648-68924667 None:intergenic 70.0%
GGCACCAGAGCTGGGTGACG+TGG + chr7_2:68928871-68928890 Msa1072010:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 68923925 68931712 68923925 ID=Msa1072010;Name=Msa1072010
chr7_2 mRNA 68923925 68931712 68923925 ID=Msa1072010-mRNA-1;Parent=Msa1072010;Name=Msa1072010-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0.16|1|0|0.16|6|452|310
chr7_2 exon 68923925 68924102 68923925 ID=Msa1072010-mRNA-1:exon:15222;Parent=Msa1072010-mRNA-1
chr7_2 exon 68924163 68924292 68924163 ID=Msa1072010-mRNA-1:exon:15223;Parent=Msa1072010-mRNA-1
chr7_2 exon 68925295 68925465 68925295 ID=Msa1072010-mRNA-1:exon:15224;Parent=Msa1072010-mRNA-1
chr7_2 exon 68925517 68925631 68925517 ID=Msa1072010-mRNA-1:exon:15225;Parent=Msa1072010-mRNA-1
chr7_2 exon 68926043 68926109 68926043 ID=Msa1072010-mRNA-1:exon:15226;Parent=Msa1072010-mRNA-1
chr7_2 exon 68930989 68931712 68930989 ID=Msa1072010-mRNA-1:exon:15227;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68923925 68924102 68923925 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68924163 68924292 68924163 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68925295 68925465 68925295 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68925517 68925631 68925517 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68926043 68926109 68926043 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 CDS 68930989 68931260 68930989 ID=Msa1072010-mRNA-1:cds;Parent=Msa1072010-mRNA-1
chr7_2 three_prime_UTR 68931261 68931712 68931261 ID=Msa1072010-mRNA-1:three_prime_utr;Parent=Msa1072010-mRNA-1
Gene Sequence

>Msa1072010

ATGAGCATTCTGTCATCACGAACAAGTTCTCGTTCCGTAACAGAAACGGTAAACGGTTCACACAAGTTCGTAATCAAAGGCTACTCACTTGCAAAAGGAATGGGAGTTGGTAAACACATAGCCAGCGAGACTTTCACCGTCGGTGGTTACCAATGGGCAATTTACTTCTACCCCGACGGTACCGATGTTAGAGCTCTTTTTGAACTCACTTTGCTTGATCAGAGTCCTAATGGAAAGCATAAGGTTCATAGTCATTTTGATCGTTCTCTTGAGAGTGGTCCTTATACTCTTAAGTATCGCGGCAGCATGGGGTATAAGCGGTTTTTCAAACGTGCTCAACTCGAGGCGTCGTCCTTCCTTAAGGATGACTGTTTGAAGATAAACTGCACCGTTGGTGTTGTTGTGTCGTCCATAGATTGCTCTAAATTGACCACCATACATGTTCCTGAATCTGACATTGGATCTCATTTTGGCATGCTGTTTCATGCACACAAGCTTGTTATGGCAGCCCGGTCAACTGCATTTGAAACTGAGTTTTTCAATAGTATGGAGGAAGATGACCGTGATGTAGTTGTTACGGACATGGAACCTAAGTCCATCTGTCTACAATTTTCTGCTGAAAACCTTGTTGGTGAGTTTGTTTATTTCCCACAAAAGTATACTGTGATGCAGTCTGATGGTTTTGAGTATCTAAAAGAAAACTGTCCGTTGCTGCAATCAGAATTGCTTAAGACAGTTGCAGGAGGCGAAGAGGAATTTAGCGGTGAAGGAAAATGCCGAAGTGTGTGGGCCCAAGTTTCTGATGGCGGTGAGACTAATGATAGGAGCGTAAGACAACAAACTTGGGAAAACGGAGTGGAAAGAGGTCAGAACTTATGGGTTAACCTTTCTGATGGTGTTAACAATGATCGGAGTCCAGGGCAAGAAGCTTGA
Protein sequence

>Msa1072010

MSILSSRTSSRSVTETVNGSHKFVIKGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGTDVRALFELTLLDQSPNGKHKVHSHFDRSLESGPYTLKYRGSMGYKRFFKRAQLEASSFLKDDCLKINCTVGVVVSSIDCSKLTTIHVPESDIGSHFGMLFHAHKLVMAARSTAFETEFFNSMEEDDRDVVVTDMEPKSICLQFSAENLVGEFVYFPQKYTVMQSDGFEYLKENCPLLQSELLKTVAGGEEEFSGEGKCRSVWAQVSDGGETNDRSVRQQTWENGVERGQNLWVNLSDGVNNDRSPGQEA*