Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077290 | KEH23954.1 | 93.882 | 425 | 13 | 1 | 1 | 412 | 31 | 455 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077290 | sp|B5WWZ9|FAO2_LOTJA | 77.901 | 362 | 75 | 2 | 455 | 811 | 120 | 481 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077290 | A0A072U2N6 | 93.882 | 425 | 13 | 1 | 1 | 412 | 31 | 455 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1077290 | Msa1077390 | 0.826835 | 2.180955e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077290 | MtrunA17_Chr7g0261581 | 93.882 | 425 | 13 | 1 | 1 | 412 | 31 | 455 | 0.0 | 799 |
| Msa1077290 | MtrunA17_Chr7g0261561 | 95.028 | 362 | 15 | 1 | 453 | 811 | 110 | 471 | 0.0 | 675 |
| Msa1077290 | MtrunA17_Chr1g0183461 | 66.746 | 421 | 125 | 2 | 5 | 412 | 19 | 437 | 0.0 | 565 |
| Msa1077290 | MtrunA17_Chr1g0187271 | 55.189 | 424 | 166 | 5 | 5 | 411 | 39 | 455 | 4.33e-137 | 424 |
| Msa1077290 | MtrunA17_Chr4g0041761 | 53.297 | 364 | 160 | 4 | 456 | 810 | 124 | 486 | 2.64e-121 | 383 |
| Msa1077290 | MtrunA17_Chr5g0409291 | 46.798 | 406 | 202 | 2 | 19 | 411 | 17 | 421 | 2.37e-104 | 334 |
| Msa1077290 | MtrunA17_Chr8g0369551 | 46.040 | 404 | 198 | 5 | 19 | 406 | 12 | 411 | 1.12e-98 | 319 |
| Msa1077290 | MtrunA17_Chr1g0152501 | 41.981 | 424 | 223 | 6 | 2 | 407 | 15 | 433 | 1.46e-87 | 292 |
| Msa1077290 | MtrunA17_Chr1g0187391 | 52.066 | 242 | 100 | 2 | 507 | 746 | 3 | 230 | 4.56e-77 | 259 |
| Msa1077290 | MtrunA17_Chr8g0369761 | 38.168 | 393 | 203 | 7 | 456 | 811 | 150 | 539 | 5.49e-68 | 241 |
| Msa1077290 | MtrunA17_Chr5g0408241 | 38.539 | 397 | 202 | 9 | 453 | 811 | 162 | 554 | 7.75e-68 | 241 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077290 | AT4G28600.1 | 54.286 | 420 | 170 | 4 | 6 | 406 | 44 | 460 | 8.35e-137 | 423 |
| Msa1077290 | AT4G28600.2 | 54.286 | 420 | 170 | 4 | 6 | 406 | 44 | 460 | 8.35e-137 | 423 |
| Msa1077290 | AT4G28600.3 | 54.286 | 420 | 170 | 4 | 6 | 406 | 44 | 460 | 8.82e-137 | 424 |
| Msa1077290 | AT4G28570.1 | 55.586 | 367 | 149 | 4 | 457 | 810 | 113 | 478 | 6.66e-123 | 387 |
| Msa1077290 | AT4G28570.2 | 55.586 | 367 | 149 | 4 | 457 | 810 | 113 | 478 | 6.66e-123 | 387 |
| Msa1077290 | AT3G23410.2 | 54.396 | 364 | 155 | 4 | 456 | 810 | 44 | 405 | 3.90e-122 | 383 |
| Msa1077290 | AT3G23410.1 | 54.396 | 364 | 155 | 4 | 456 | 810 | 112 | 473 | 1.78e-121 | 384 |
| Msa1077290 | AT1G03990.1 | 52.316 | 367 | 159 | 6 | 457 | 811 | 127 | 489 | 1.32e-112 | 360 |
| Msa1077290 | AT1G27460.2 | 41.284 | 436 | 221 | 6 | 3 | 419 | 16 | 435 | 8.77e-94 | 305 |
| Msa1077290 | AT1G27460.1 | 41.284 | 436 | 221 | 6 | 3 | 419 | 16 | 435 | 3.11e-92 | 305 |
| Msa1077290 | AT1G27460.3 | 41.284 | 436 | 221 | 6 | 3 | 419 | 16 | 435 | 3.52e-92 | 305 |
| Msa1077290 | AT2G43040.2 | 46.135 | 401 | 202 | 2 | 19 | 406 | 23 | 422 | 1.73e-88 | 295 |
| Msa1077290 | AT2G43040.1 | 46.135 | 401 | 202 | 2 | 19 | 406 | 23 | 422 | 1.73e-88 | 295 |
| Msa1077290 | AT4G19380.1 | 38.539 | 397 | 209 | 9 | 449 | 818 | 79 | 467 | 6.83e-67 | 236 |
| Msa1077290 | AT4G19380.2 | 38.539 | 397 | 209 | 9 | 449 | 818 | 121 | 509 | 8.09e-67 | 237 |
Find 232 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTCTGTCATTCAAATT+AGG | 0.139329 | 7_2:-75885397 | Msa1077290:CDS |
| TTGGATTAAGGAAGTCTTTA+AGG | 0.146681 | 7_2:-75883458 | Msa1077290:three_prime_UTR |
| AAGGAAGTCTTTAAGGATTT+TGG | 0.147533 | 7_2:-75883451 | Msa1077290:three_prime_UTR |
| ACATGTTCCTGCTTTGTTAA+TGG | 0.165390 | 7_2:-75886800 | Msa1077290:CDS |
| TCATTTGCTCTATCGGTTTC+CGG | 0.181851 | 7_2:-75886946 | Msa1077290:CDS |
| CAATTTCTCTGAGATTTCTT+TGG | 0.209802 | 7_2:-75885321 | Msa1077290:CDS |
| TAGGATGACACAACCCATTT+TGG | 0.218536 | 7_2:+75886552 | None:intergenic |
| GCCTCTTCAATGTTATTTCT+TGG | 0.225634 | 7_2:+75887048 | None:intergenic |
| TCGACTGCAAGTGGGATTTC+TGG | 0.229111 | 7_2:-75888918 | Msa1077290:CDS |
| TTGAGCTACTTCCAGAATTA+TGG | 0.231888 | 7_2:-75887251 | Msa1077290:CDS |
| TAGTTACTTTGGATTCTATT+TGG | 0.246811 | 7_2:+75883897 | None:intergenic |
| AACAAAGCAGGAACATGTTT+TGG | 0.250400 | 7_2:+75886805 | None:intergenic |
| AAAATCTTAGAATTGGATTA+AGG | 0.256561 | 7_2:-75883470 | Msa1077290:three_prime_UTR |
| TCAGCAAGTTTCCATAATTC+TGG | 0.257651 | 7_2:+75887240 | None:intergenic |
| CATTTGCTCTATCGGTTTCC+GGG | 0.259373 | 7_2:-75886945 | Msa1077290:CDS |
| TCTCTTCGATTGATAGTAAC+AGG | 0.264972 | 7_2:+75886883 | None:intergenic |
| CTCACCAATGGCATTGCTTC+TGG | 0.268395 | 7_2:+75885430 | None:intergenic |
| TGCAAGCACTATGACCAAAA+TGG | 0.273238 | 7_2:-75886566 | Msa1077290:CDS |
| CCATCCAGTTCAATTTGCTT+GGG | 0.287851 | 7_2:-75883790 | Msa1077290:three_prime_UTR |
| GGATTCTGTCATTCAAATTA+GGG | 0.293627 | 7_2:-75885396 | Msa1077290:CDS |
| TGCAAGAGATTCCGATGAAT+TGG | 0.293773 | 7_2:+75888959 | None:intergenic |
| ATTATAGAAGCACCTGCTTT+AGG | 0.296752 | 7_2:-75883663 | Msa1077290:three_prime_UTR |
| ATCCAATCCCTGAATGAAAA+AGG | 0.297546 | 7_2:-75884646 | Msa1077290:CDS |
| CCCATCCAGTTCAATTTGCT+TGG | 0.299636 | 7_2:-75883791 | Msa1077290:three_prime_UTR |
| GACAGAGAAAATCTTAGAAT+TGG | 0.302166 | 7_2:-75883477 | Msa1077290:three_prime_UTR |
| AAGTTATGATTCCTCCTTCA+TGG | 0.302332 | 7_2:+75883727 | None:intergenic |
| TGAAGATTCCTTCCAATGTT+TGG | 0.309399 | 7_2:+75883816 | None:intergenic |
| CGAAACACCGAGTAAGAAAT+TGG | 0.309854 | 7_2:+75886669 | None:intergenic |
| AAAACAAATGGATACCTCTA+AGG | 0.315779 | 7_2:-75885262 | Msa1077290:CDS |
| CAGGAAGCTAGAGCTTTGTT+AGG | 0.315828 | 7_2:-75888166 | Msa1077290:CDS |
| CTTCATCTTCAGTGACTTCA+AGG | 0.331159 | 7_2:+75884623 | None:intergenic |
| CATTCGGAACCAAAGTTTCC+AGG | 0.338840 | 7_2:+75887303 | None:intergenic |
| CTTGATTGAGTCTTCTTTAC+CGG | 0.339392 | 7_2:-75887334 | Msa1077290:CDS |
| CATTGGTGAGGTGGATTCTA+TGG | 0.342290 | 7_2:-75885417 | Msa1077290:CDS |
| GCTAAAGGCAAAATGTTTGC+AGG | 0.345068 | 7_2:-75887951 | Msa1077290:CDS |
| TTGTCTCTATTAGTCCTTCC+TGG | 0.345240 | 7_2:+75884692 | None:intergenic |
| GTGGAGGTTCAGCTATAAAC+TGG | 0.347090 | 7_2:-75884357 | Msa1077290:CDS |
| CCAAACATGCAAAATTATTC+TGG | 0.350014 | 7_2:-75887358 | Msa1077290:CDS |
| AAACCAATGTGGAAGGCAAT+AGG | 0.350351 | 7_2:-75884763 | Msa1077290:CDS |
| CTGTTGAGGTTGGAACTTAT+AGG | 0.352665 | 7_2:-75883416 | Msa1077290:three_prime_UTR |
| GTTAGGGAGATATGAATATC+AGG | 0.361853 | 7_2:-75888149 | Msa1077290:CDS |
| TGTCTCTAACCAATGCAAAA+AGG | 0.362568 | 7_2:+75883556 | None:intergenic |
| TGGTTCCGAATGTAAATTGC+AGG | 0.369443 | 7_2:-75887292 | Msa1077290:CDS |
| TCTTTACCGGAAGGCTTACC+TGG | 0.369588 | 7_2:-75887321 | Msa1077290:CDS |
| ATCGGAATCTCTTGCAACTA+AGG | 0.370962 | 7_2:-75888952 | Msa1077290:CDS |
| TGCTGTTACGGTTGTAGAAC+CGG | 0.371663 | 7_2:-75884091 | Msa1077290:CDS |
| GTTTAGTTCTGCACATCAAA+TGG | 0.373441 | 7_2:-75883283 | Msa1077290:three_prime_UTR |
| GTTGAGAGGAGGCTGGATTC+TGG | 0.373951 | 7_2:-75888882 | Msa1077290:CDS |
| AGAGTGATCATCCTAGAAAA+AGG | 0.376831 | 7_2:-75884505 | Msa1077290:CDS |
| TCCTGGAGAGGCCTCTTCTT+CGG | 0.378893 | 7_2:+75884709 | None:intergenic |
| CTCAGATCTTCGTTCCCATA+TGG | 0.379479 | 7_2:-75887085 | Msa1077290:CDS |
| AACACAAGCACCGCCCTTAG+AGG | 0.384539 | 7_2:+75885248 | None:intergenic |
| ACATGATGAAATAGTTACTT+TGG | 0.389119 | 7_2:+75883886 | None:intergenic |
| GTACAAATGAACTGTCCATA+TGG | 0.389274 | 7_2:+75887070 | None:intergenic |
| GGATTGGATTAATGTAGAAT+TGG | 0.391272 | 7_2:+75884660 | None:intergenic |
| TTCTCAAGATTATTCTTCCT+TGG | 0.392128 | 7_2:-75884470 | Msa1077290:CDS |
| GAGGGTGCAGTTGATGAGAA+TGG | 0.395238 | 7_2:-75883231 | Msa1077290:three_prime_UTR |
| GAGAAGAAATTCTCAAGAAA+TGG | 0.402058 | 7_2:-75885292 | Msa1077290:CDS |
| CAGGTTCTTGCAAGGTTTGA+AGG | 0.403012 | 7_2:-75887932 | Msa1077290:intron |
| AAATGCGATGTTGTCATTGT+TGG | 0.403271 | 7_2:-75884580 | Msa1077290:CDS |
| TGATTCCGAGAGCGTCTCTT+GGG | 0.406377 | 7_2:+75888028 | None:intergenic |
| TGATGAGAATGGAGAAAGTT+GGG | 0.414388 | 7_2:-75883220 | Msa1077290:three_prime_UTR |
| TGTGGAACTCTTTCTTGCAT+TGG | 0.415327 | 7_2:-75885361 | Msa1077290:CDS |
| TTGCTGCAGACAGATGTAAA+TGG | 0.419312 | 7_2:-75884790 | Msa1077290:intron |
| GCACCTTTCATTTGCTCTAT+CGG | 0.421680 | 7_2:-75886953 | Msa1077290:CDS |
| TACAGCTGGATTACTATTAG+AGG | 0.424245 | 7_2:-75887981 | Msa1077290:CDS |
| AAGTTTCCAGGTAAGCCTTC+CGG | 0.427980 | 7_2:+75887315 | None:intergenic |
| GCTTTCAAAATCAAGTTCTT+CGG | 0.428581 | 7_2:-75884189 | Msa1077290:CDS |
| TTCTTATAGACTTGATCAAA+TGG | 0.433097 | 7_2:-75883499 | Msa1077290:three_prime_UTR |
| GCAAGAGATTCCGATGAATT+GGG | 0.434083 | 7_2:+75888960 | None:intergenic |
| TTTGCATTGGTTAGAGACAT+AGG | 0.434303 | 7_2:-75883552 | Msa1077290:three_prime_UTR |
| AACCCTGACCTTGCAAAAGA+TGG | 0.435423 | 7_2:-75886757 | Msa1077290:CDS |
| CATTCCTTCTTAACAGAGTC+AGG | 0.435806 | 7_2:+75884316 | None:intergenic |
| TGCAACTCCTCCACCGCTAC+CGG | 0.435895 | 7_2:+75884555 | None:intergenic |
| TCAGAGAAATTGAGAACAAA+AGG | 0.436118 | 7_2:+75885332 | None:intergenic |
| AACCAATGTGGAAGGCAATA+GGG | 0.438614 | 7_2:-75884762 | Msa1077290:CDS |
| CGGAAAGGGTGCGAGAGAAT+CGG | 0.450150 | 7_2:-75884169 | Msa1077290:CDS |
| AATGGTCAAAAGAAAACAAA+TGG | 0.451166 | 7_2:-75885274 | Msa1077290:CDS |
| TGAGTCGGATCCTTCAATAA+TGG | 0.451894 | 7_2:-75886977 | Msa1077290:CDS |
| ACTCTTTCTTGCATTGGAAG+TGG | 0.452250 | 7_2:-75885355 | Msa1077290:CDS |
| AAAATCAAGTTCTTCGGAAA+GGG | 0.453657 | 7_2:-75884183 | Msa1077290:CDS |
| GTATTAGTTCCATGGATCTC+AGG | 0.457639 | 7_2:-75883624 | Msa1077290:three_prime_UTR |
| ACCGAAGAAGAGGCCTCTCC+AGG | 0.458071 | 7_2:-75884710 | Msa1077290:CDS |
| AGTCTCCTGCAATTTACATT+CGG | 0.458679 | 7_2:+75887287 | None:intergenic |
| TATTGTGGTTCGTGCTGTTA+CGG | 0.459201 | 7_2:-75884103 | Msa1077290:CDS |
| TAGCCCCAAGCAAATTGAAC+TGG | 0.461727 | 7_2:+75883786 | None:intergenic |
| GCAAGCACTATGACCAAAAT+GGG | 0.462135 | 7_2:-75886565 | Msa1077290:intron |
| GCGGCGGGAGCTGTTGAGGT+TGG | 0.464809 | 7_2:-75883426 | Msa1077290:three_prime_UTR |
| GAGAAATTCATAATAGAAGA+TGG | 0.465338 | 7_2:-75883989 | Msa1077290:CDS |
| CAAAATCAAGTTCTTCGGAA+AGG | 0.466408 | 7_2:-75884184 | Msa1077290:CDS |
| CTTCTATACTTTGTTCTCAA+AGG | 0.469534 | 7_2:-75885210 | Msa1077290:intron |
| GTTGGTTCCGGTAGCGGTGG+AGG | 0.473180 | 7_2:-75884562 | Msa1077290:CDS |
| CAAATGGGAAGTTGTAGAAT+GGG | 0.473735 | 7_2:-75883267 | Msa1077290:three_prime_UTR |
| GAAAACATGACAAGCTTAAG+TGG | 0.474318 | 7_2:-75883756 | Msa1077290:three_prime_UTR |
| TTGATGAGAATGGAGAAAGT+TGG | 0.475999 | 7_2:-75883221 | Msa1077290:three_prime_UTR |
| GTCATTGTTGGTTCCGGTAG+CGG | 0.476027 | 7_2:-75884568 | Msa1077290:CDS |
| GAAGGCTTACCTGGAAACTT+TGG | 0.478833 | 7_2:-75887312 | Msa1077290:CDS |
| GTGATTCCGAGAGCGTCTCT+TGG | 0.482794 | 7_2:+75888027 | None:intergenic |
| ACTAATACTGAAAATGATCC+AGG | 0.486166 | 7_2:+75883639 | None:intergenic |
| TTGGTTGATGCTGTTGAAAA+CGG | 0.486532 | 7_2:-75884040 | Msa1077290:CDS |
| TCAAATGGGAAGTTGTAGAA+TGG | 0.486816 | 7_2:-75883268 | Msa1077290:three_prime_UTR |
| TACCCTATTGCCTTCCACAT+TGG | 0.486945 | 7_2:+75884760 | None:intergenic |
| TTTAGTTCTGCACATCAAAT+GGG | 0.491700 | 7_2:-75883282 | Msa1077290:three_prime_UTR |
| CCAAGCAAATTGAACTGGAT+GGG | 0.494955 | 7_2:+75883791 | None:intergenic |
| TTGCAGAGCGCGTGAGAACT+TGG | 0.496506 | 7_2:-75886722 | Msa1077290:CDS |
| GGAGAAAGTTGGGAAGCAAA+AGG | 0.497184 | 7_2:-75883210 | Msa1077290:three_prime_UTR |
| TTGGTTAGAGACATAGGATC+AGG | 0.497758 | 7_2:-75883546 | Msa1077290:three_prime_UTR |
| TACAAAATCCAAACATTGGA+AGG | 0.499960 | 7_2:-75883824 | Msa1077290:three_prime_UTR |
| TGGAGGGATCAAAGAAGAAC+CGG | 0.502512 | 7_2:-75883370 | Msa1077290:three_prime_UTR |
| CATCCAGTTCAATTTGCTTG+GGG | 0.502949 | 7_2:-75883789 | Msa1077290:three_prime_UTR |
| AAATCATTAGAGGAGGTGTA+AGG | 0.503520 | 7_2:+75883856 | None:intergenic |
| AACACCTGACTCTGTTAAGA+AGG | 0.504540 | 7_2:-75884320 | Msa1077290:CDS |
| ACCCTGACCTTGCAAAAGAT+GGG | 0.504650 | 7_2:-75886756 | Msa1077290:CDS |
| GATGTTGTCATTGTTGGTTC+CGG | 0.504889 | 7_2:-75884574 | Msa1077290:CDS |
| GGAATCATGCCAACTCTTGA+CGG | 0.506088 | 7_2:-75884412 | Msa1077290:CDS |
| CGCGGTCTAGAAGTGAACTT+TGG | 0.506190 | 7_2:-75883311 | Msa1077290:three_prime_UTR |
| ATGTGTCAAAGTATATTATG+TGG | 0.506585 | 7_2:-75882933 | Msa1077290:three_prime_UTR |
| ACAAAGAGAAAGAATTGCTC+AGG | 0.508005 | 7_2:-75883965 | Msa1077290:CDS |
| TCAGGAGAAGTAAGAAGTGA+AGG | 0.509587 | 7_2:-75883528 | Msa1077290:three_prime_UTR |
| GAATTTCTCAGCTCTACATC+CGG | 0.510686 | 7_2:+75884003 | None:intergenic |
| GGTAAAATGATGATCTTAGC+TGG | 0.512374 | 7_2:-75884391 | Msa1077290:CDS |
| CAGGGAGTAATTCTTCCCAT+TGG | 0.513891 | 7_2:+75886902 | None:intergenic |
| CTCTGATTATCAATCTGCTA+TGG | 0.514444 | 7_2:-75884260 | Msa1077290:CDS |
| TGCAGTTGGTGTTAACCCTA+TGG | 0.514783 | 7_2:-75883154 | Msa1077290:three_prime_UTR |
| CGCTCTAAATAAAATTGAGT+CGG | 0.515212 | 7_2:-75886992 | Msa1077290:CDS |
| AAAAGTTGAAACCGAAGAAG+AGG | 0.517257 | 7_2:-75884720 | Msa1077290:CDS |
| TACAAATGAACTGTCCATAT+GGG | 0.517292 | 7_2:+75887071 | None:intergenic |
| AGGAAGCTAGAGCTTTGTTA+GGG | 0.517630 | 7_2:-75888165 | Msa1077290:CDS |
| GAGAAAGTTGGGAAGCAAAA+GGG | 0.519118 | 7_2:-75883209 | Msa1077290:three_prime_UTR |
| ACAGTATGCTGTAGACTGAA+TGG | 0.519256 | 7_2:+75883128 | None:intergenic |
| AGTCCACTAGAAATCATTAG+AGG | 0.522212 | 7_2:+75883846 | None:intergenic |
| GTAGACTGAATGGTTACCAT+AGG | 0.522559 | 7_2:+75883138 | None:intergenic |
| CATCAAGATTCCATCGATGA+AGG | 0.526435 | 7_2:+75887178 | None:intergenic |
| ATTGCAGGAGACTCTAAGTA+AGG | 0.527304 | 7_2:-75887277 | Msa1077290:CDS |
| ATTAGAGGCGATCTTGCTAA+AGG | 0.527574 | 7_2:-75887966 | Msa1077290:CDS |
| CCCAAGCAAATTGAACTGGA+TGG | 0.531985 | 7_2:+75883790 | None:intergenic |
| AACAATGGTTCCCAATTCAT+CGG | 0.533758 | 7_2:-75888970 | None:intergenic |
| GAGTAATTCTTCCCATTGGT+TGG | 0.534713 | 7_2:+75886906 | None:intergenic |
| GACTCGGTATGCAGAAGGAT+TGG | 0.536556 | 7_2:-75884238 | Msa1077290:CDS |
| GACAGCTTTAGCCAACCAAT+GGG | 0.537588 | 7_2:-75886917 | Msa1077290:CDS |
| AGTCTAGCCAATTTCTTACT+CGG | 0.538440 | 7_2:-75886676 | Msa1077290:CDS |
| TTACTATCAATCGAAGAGAA+AGG | 0.541680 | 7_2:-75886879 | Msa1077290:CDS |
| CCAATGTCTATACATACAGC+TGG | 0.541945 | 7_2:-75887995 | Msa1077290:CDS |
| TGATACTGTCACGGTTGTCG+AGG | 0.542979 | 7_2:-75883337 | Msa1077290:three_prime_UTR |
| TTATCAATCTGCTATGGACT+CGG | 0.543005 | 7_2:-75884254 | Msa1077290:CDS |
| AATGTTTGCAGGTTCTTGCA+AGG | 0.544652 | 7_2:-75887940 | Msa1077290:CDS |
| GCTGGCTCAACAGTCGGTGG+AGG | 0.547651 | 7_2:-75884373 | Msa1077290:CDS |
| AAGCAATGCCATTGGTGAGG+TGG | 0.547665 | 7_2:-75885426 | Msa1077290:CDS |
| ATGGGTAAGAATGAAGAAGA+GGG | 0.548348 | 7_2:-75883249 | Msa1077290:three_prime_UTR |
| GGGTTAACACCAACTGCACT+AGG | 0.549107 | 7_2:+75883159 | None:intergenic |
| GAATCGTCGTTGCGTGAGAG+TGG | 0.552416 | 7_2:-75888843 | Msa1077290:CDS |
| GAAAGGTGCTCCATTATTGA+AGG | 0.552665 | 7_2:+75886967 | None:intergenic |
| TATTATTCCTCGACTGCAAG+TGG | 0.555085 | 7_2:-75888927 | Msa1077290:CDS |
| GCTTCAGAAGATCATTATTG+TGG | 0.555846 | 7_2:-75884118 | Msa1077290:CDS |
| GGTTGCGGCGGGAGCTGTTG+AGG | 0.556378 | 7_2:-75883430 | Msa1077290:three_prime_UTR |
| ATTGAGTCTTCTTTACCGGA+AGG | 0.556391 | 7_2:-75887330 | Msa1077290:CDS |
| AGCTAATGTTGTTGTTCAAG+AGG | 0.556714 | 7_2:-75885459 | Msa1077290:CDS |
| CTCTTCGATTGATAGTAACA+GGG | 0.557026 | 7_2:+75886884 | None:intergenic |
| TTAGAAGCCATTAACAAAGC+AGG | 0.558425 | 7_2:+75886793 | None:intergenic |
| TGGACAAGTTGAGAGGAGGC+TGG | 0.561191 | 7_2:-75888889 | Msa1077290:CDS |
| AGTGGGATTTCTGGTCAAGA+TGG | 0.561795 | 7_2:-75888909 | Msa1077290:CDS |
| ATCTTAGCTGGCTCAACAGT+CGG | 0.561829 | 7_2:-75884379 | Msa1077290:CDS |
| GGACTACAAAATCCAAACAT+TGG | 0.561944 | 7_2:-75883828 | Msa1077290:three_prime_UTR |
| GTTCATCGCTGAACTTTCCA+AGG | 0.562299 | 7_2:+75884453 | None:intergenic |
| CTGACTCTGTTAAGAAGGAA+TGG | 0.564307 | 7_2:-75884315 | Msa1077290:CDS |
| ATTGTTGGTTCCGGTAGCGG+TGG | 0.565231 | 7_2:-75884565 | Msa1077290:CDS |
| GTTGGAACTTATAGGAGTGA+TGG | 0.565498 | 7_2:-75883408 | Msa1077290:three_prime_UTR |
| AGAAATCCCACTTGCAGTCG+AGG | 0.567491 | 7_2:+75888920 | None:intergenic |
| CAAGCAAATTGAACTGGATG+GGG | 0.567533 | 7_2:+75883792 | None:intergenic |
| ATTCCGAGAGCGTCTCTTGG+GGG | 0.568706 | 7_2:+75888030 | None:intergenic |
| CTATGGACTCGGTATGCAGA+AGG | 0.572855 | 7_2:-75884243 | Msa1077290:CDS |
| AGGTACTGACTCAACTTGGT+TGG | 0.573721 | 7_2:-75884059 | Msa1077290:CDS |
| TCTATTAGTCCTTCCTGGAG+AGG | 0.575506 | 7_2:+75884697 | None:intergenic |
| GTGGAAGGCAATAGGGTACA+AGG | 0.575769 | 7_2:-75884755 | Msa1077290:CDS |
| TGACAGCTTTAGCCAACCAA+TGG | 0.576727 | 7_2:-75886918 | Msa1077290:CDS |
| AATGGGTAAGAATGAAGAAG+AGG | 0.577458 | 7_2:-75883250 | Msa1077290:three_prime_UTR |
| TGGCTATAAACCAATGTGGA+AGG | 0.578210 | 7_2:-75884770 | Msa1077290:CDS |
| AATGATCCAGGTCCTAAAGC+AGG | 0.580745 | 7_2:+75883651 | None:intergenic |
| GCTGCAATTCTTGCAAACTC+AGG | 0.581743 | 7_2:-75884532 | Msa1077290:CDS |
| GAGTGATTGCTGCAACAAGT+TGG | 0.582523 | 7_2:-75883943 | Msa1077290:CDS |
| ACCAAGAAATAACATTGAAG+AGG | 0.583566 | 7_2:-75887049 | Msa1077290:CDS |
| GAAGCACCTGCTTTAGGACC+TGG | 0.586542 | 7_2:-75883657 | Msa1077290:three_prime_UTR |
| GGAGTTTCTTGATACTGTCA+CGG | 0.587716 | 7_2:-75883346 | Msa1077290:three_prime_UTR |
| CAATCGAAGAGAAAGGTACC+TGG | 0.587867 | 7_2:-75886872 | Msa1077290:CDS |
| TGTGTCAAAGTATATTATGT+GGG | 0.590684 | 7_2:-75882932 | Msa1077290:three_prime_UTR |
| TTCCGAGAGCGTCTCTTGGG+GGG | 0.595155 | 7_2:+75888031 | None:intergenic |
| TGCACCAGAAGCAATGCCAT+TGG | 0.595426 | 7_2:-75885434 | Msa1077290:CDS |
| ATATCGAGTCCTGAGATCCA+TGG | 0.595456 | 7_2:+75883615 | None:intergenic |
| TTAAGTGGTAATAACCATGA+AGG | 0.599115 | 7_2:-75883741 | Msa1077290:three_prime_UTR |
| TGATTGCTGCAACAAGTTGG+AGG | 0.600505 | 7_2:-75883940 | Msa1077290:CDS |
| GGAATGCACTCCTTCATCGA+TGG | 0.601079 | 7_2:-75887188 | Msa1077290:CDS |
| CATAGAATCCACCTCACCAA+TGG | 0.602003 | 7_2:+75885418 | None:intergenic |
| ACAGTATCAAGAAACTCCTC+CGG | 0.602330 | 7_2:+75883351 | None:intergenic |
| AACGGCGCAGTTATCCTCAC+CGG | 0.603490 | 7_2:-75884022 | Msa1077290:CDS |
| TAGACTGAATGGTTACCATA+GGG | 0.604114 | 7_2:+75883139 | None:intergenic |
| GGGAGATATGAATATCAGGA+AGG | 0.606477 | 7_2:-75888145 | Msa1077290:CDS |
| GATTCCGAGAGCGTCTCTTG+GGG | 0.607422 | 7_2:+75888029 | None:intergenic |
| AAAGGGTTGTATGTGTGTGA+TGG | 0.608484 | 7_2:-75883192 | Msa1077290:three_prime_UTR |
| TTGCTGTTTCTAACTCTGAG+AGG | 0.609678 | 7_2:-75886627 | Msa1077290:CDS |
| GCTGTATGTATAGACATTGG+TGG | 0.609862 | 7_2:+75887998 | None:intergenic |
| AAACAAATGGATACCTCTAA+GGG | 0.609941 | 7_2:-75885261 | Msa1077290:CDS |
| CATATGGGAACGAAGATCTG+AGG | 0.613947 | 7_2:+75887086 | None:intergenic |
| ACTCGATATGAAAGACAGAA+TGG | 0.616506 | 7_2:-75883601 | Msa1077290:three_prime_UTR |
| AAGAAGAGGCCTCTCCAGGA+AGG | 0.616993 | 7_2:-75884706 | Msa1077290:CDS |
| GATACTGTCACGGTTGTCGA+GGG | 0.617089 | 7_2:-75883336 | Msa1077290:three_prime_UTR |
| TAAGAAGATTAAGTGCCACC+AGG | 0.618623 | 7_2:+75886854 | None:intergenic |
| GTCAAGATGGACAAGTTGAG+AGG | 0.622304 | 7_2:-75888896 | Msa1077290:CDS |
| CCAGCTGTATGTATAGACAT+TGG | 0.623587 | 7_2:+75887995 | None:intergenic |
| CCTCCTCTAATGATTTCTAG+TGG | 0.623746 | 7_2:-75883849 | Msa1077290:exon |
| AACAAGCTCTACGAATCATG+TGG | 0.625384 | 7_2:-75884433 | Msa1077290:CDS |
| CTATTGGATTCAAATATGAG+AGG | 0.626561 | 7_2:+75882885 | None:intergenic |
| ATTTGCTCTATCGGTTTCCG+GGG | 0.634408 | 7_2:-75886944 | Msa1077290:CDS |
| AGTGGTAATAACCATGAAGG+AGG | 0.637889 | 7_2:-75883738 | Msa1077290:three_prime_UTR |
| AAACCGATAGAGCAAATGAA+AGG | 0.641771 | 7_2:+75886950 | None:intergenic |
| ATATGGGAACGAAGATCTGA+GGG | 0.642498 | 7_2:+75887087 | None:intergenic |
| CCCTGACCTTGCAAAAGATG+GGG | 0.643436 | 7_2:-75886755 | Msa1077290:CDS |
| CCACTAGAAATCATTAGAGG+AGG | 0.647396 | 7_2:+75883849 | None:intergenic |
| TGGAGGTTCAGCTATAAACT+GGG | 0.647546 | 7_2:-75884356 | Msa1077290:CDS |
| TTAGCTGGCTCAACAGTCGG+TGG | 0.653010 | 7_2:-75884376 | Msa1077290:CDS |
| ATTATTCCTCGACTGCAAGT+GGG | 0.654555 | 7_2:-75888926 | Msa1077290:CDS |
| AAGATGGACAAGTTGAGAGG+AGG | 0.654876 | 7_2:-75888893 | Msa1077290:CDS |
| TCACGGTTGTCGAGGGACCG+CGG | 0.657850 | 7_2:-75883329 | Msa1077290:three_prime_UTR |
| CAGAAGCAATGCCATTGGTG+AGG | 0.657876 | 7_2:-75885429 | Msa1077290:CDS |
| TAAATGGCTATAAACCAATG+TGG | 0.670511 | 7_2:-75884774 | Msa1077290:CDS |
| AGGGATCAAAGAAGAACCGG+AGG | 0.683256 | 7_2:-75883367 | Msa1077290:three_prime_UTR |
| TAAGACAAAATAACTTCACG+TGG | 0.691526 | 7_2:+75887213 | None:intergenic |
| AAAGTTGTTGAGTAGCAGTG+AGG | 0.694474 | 7_2:-75886830 | Msa1077290:CDS |
| CAAATGGATACCTCTAAGGG+CGG | 0.696692 | 7_2:-75885258 | Msa1077290:CDS |
| TCTCAGCTCTACATCCGGTG+AGG | 0.705853 | 7_2:+75884008 | None:intergenic |
| CAAAGTTCACTTCTAGACCG+CGG | 0.721209 | 7_2:+75883312 | None:intergenic |
| TCGAAGAGAAAGGTACCTGG+TGG | 0.725281 | 7_2:-75886869 | Msa1077290:CDS |
| GAAGGCAATAGGGTACAAGG+TGG | 0.747351 | 7_2:-75884752 | Msa1077290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATTCATTTTATAAATAT+CGG | + | chr7_2:75884370-75884389 | None:intergenic | 10.0% |
| !!! | TTTATATTAGTAAACATTTT+GGG | + | chr7_2:75884457-75884476 | None:intergenic | 10.0% |
| !!! | TTTTATATTAGTAAACATTT+TGG | + | chr7_2:75884458-75884477 | None:intergenic | 10.0% |
| !! | AAGAAAAATACATTAAAAAA+TGG | + | chr7_2:75885686-75885705 | None:intergenic | 10.0% |
| !!! | ATCATTTTTATTAAAAACAT+TGG | - | chr7_2:75887030-75887049 | Msa1077290:CDS | 10.0% |
| !!! | TCATTTTTATTAAAAACATT+GGG | - | chr7_2:75887031-75887050 | Msa1077290:CDS | 10.0% |
| !!! | ATTTTCAATTAAATTGTTCA+AGG | + | chr7_2:75883133-75883152 | None:intergenic | 15.0% |
| !!! | TAATATACCGAATTATTTTA+AGG | + | chr7_2:75883448-75883467 | None:intergenic | 15.0% |
| !!! | TGATTCATTTTATAAATATC+GGG | + | chr7_2:75884369-75884388 | None:intergenic | 15.0% |
| !! | TTCATTTATATAAAGTGAAT+AGG | + | chr7_2:75885332-75885351 | None:intergenic | 15.0% |
| !! | CATTAAAAAATGGATAAATT+TGG | + | chr7_2:75885676-75885695 | None:intergenic | 15.0% |
| !!! | TCAATTTTTCAAAAAAATTC+CGG | - | chr7_2:75885846-75885865 | Msa1077290:intron | 15.0% |
| !! | GCATTATTAAAATGATAAAA+TGG | + | chr7_2:75886691-75886710 | None:intergenic | 15.0% |
| !! | AAATTGGTCATTTAAATAAA+TGG | - | chr7_2:75886948-75886967 | Msa1077290:CDS | 15.0% |
| !!! | TTTCAAGTGAAAAAAAATGT+CGG | + | chr7_2:75883181-75883200 | None:intergenic | 20.0% |
| !! | TAAAAACTACTTATGATATC+CGG | + | chr7_2:75883301-75883320 | None:intergenic | 20.0% |
| !! | AACTAATGATTAGATGTTAA+GGG | + | chr7_2:75883520-75883539 | None:intergenic | 20.0% |
| !! | CTATGAATCAAAATCAATAA+GGG | + | chr7_2:75883958-75883977 | None:intergenic | 20.0% |
| !! | TCTATGAATCAAAATCAATA+AGG | + | chr7_2:75883959-75883978 | None:intergenic | 20.0% |
| !!! | TTTGCTTTTAAGTAAAGTTT+CGG | + | chr7_2:75884097-75884116 | None:intergenic | 20.0% |
| !! | TTTATAAAATGAATCAAGAC+CGG | - | chr7_2:75884373-75884392 | Msa1077290:CDS | 20.0% |
| !! | TGAGTGTTTAAAAAATTCAA+AGG | - | chr7_2:75884412-75884431 | Msa1077290:CDS | 20.0% |
| !! | TAAAAAATGGATAAATTTGG+TGG | + | chr7_2:75885673-75885692 | None:intergenic | 20.0% |
| !! | TATCTATCATATCATATAAG+TGG | - | chr7_2:75885709-75885728 | Msa1077290:intron | 20.0% |
| !! | ATCTATCATATCATATAAGT+GGG | - | chr7_2:75885710-75885729 | Msa1077290:intron | 20.0% |
| !!! | AAGATTAGGCTTTTTTTTAA+TGG | + | chr7_2:75885950-75885969 | None:intergenic | 20.0% |
| !! | ATCTTTCATTGATATTTGAA+AGG | - | chr7_2:75886094-75886113 | Msa1077290:intron | 20.0% |
| !! | AAAAAGCAAAACATGATATT+TGG | + | chr7_2:75886174-75886193 | None:intergenic | 20.0% |
| !! | ATTTATGTTCAAAAGAACAA+AGG | + | chr7_2:75886201-75886220 | None:intergenic | 20.0% |
| !!! | TGCTATTAATACACTTTTTT+TGG | + | chr7_2:75886827-75886846 | None:intergenic | 20.0% |
| !!! | TTTTACAGTTAAACCAAAAT+GGG | + | chr7_2:75886889-75886908 | None:intergenic | 20.0% |
| !! | TGTTATATGATCTACAAAAT+TGG | - | chr7_2:75886932-75886951 | Msa1077290:CDS | 20.0% |
| !! | ATTATAAAGCTGATGAAAAT+CGG | - | chr7_2:75886993-75887012 | Msa1077290:CDS | 20.0% |
| !!! | AAACGGTAGTTTATATTTTT+CGG | + | chr7_2:75887574-75887593 | None:intergenic | 20.0% |
| !! | AAAATCTTAGAATTGGATTA+AGG | - | chr7_2:75888392-75888411 | Msa1077290:intron | 20.0% |
| ! | TCCGATTCCTTAAAATAATT+CGG | - | chr7_2:75883438-75883457 | Msa1077290:three_prime_UTR | 25.0% |
| !!! | ACCGAATTATTTTAAGGAAT+CGG | + | chr7_2:75883442-75883461 | None:intergenic | 25.0% |
| ! | CAACTAATGATTAGATGTTA+AGG | + | chr7_2:75883521-75883540 | None:intergenic | 25.0% |
| ! | AATGATAAAATGTCACAGTA+AGG | + | chr7_2:75884056-75884075 | None:intergenic | 25.0% |
| ! | CAAAAGAGAAAACAAGAAAT+TGG | + | chr7_2:75884176-75884195 | None:intergenic | 25.0% |
| !!! | CAATTTCTTGTTTTCTCTTT+TGG | - | chr7_2:75884174-75884193 | Msa1077290:CDS | 25.0% |
| !! | CAAAATGATGATTTTATGCT+AGG | + | chr7_2:75884336-75884355 | None:intergenic | 25.0% |
| !! | CTAGCATAAAATCATCATTT+TGG | - | chr7_2:75884334-75884353 | Msa1077290:CDS | 25.0% |
| ! | TTTAAACACTCAGAATTCAA+AGG | + | chr7_2:75884404-75884423 | None:intergenic | 25.0% |
| !! | CAGAATAATTTTGCATGTTT+GGG | + | chr7_2:75884506-75884525 | None:intergenic | 25.0% |
| !!! | GTGAAGTTATTTTGTCTTAT+CGG | - | chr7_2:75884653-75884672 | Msa1077290:CDS | 25.0% |
| !!! | TCCATTTTTCTTCTATATAG+TGG | - | chr7_2:75884739-75884758 | Msa1077290:CDS | 25.0% |
| ! | TCCACTATATAGAAGAAAAA+TGG | + | chr7_2:75884743-75884762 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCTATATAGTGG+AGG | - | chr7_2:75884742-75884761 | Msa1077290:CDS | 25.0% |
| !!! | TTTTTCTTCTATATAGTGGA+GGG | - | chr7_2:75884743-75884762 | Msa1077290:CDS | 25.0% |
| !! | CTTTGTTTAATGGAATGTAA+GGG | + | chr7_2:75885570-75885589 | None:intergenic | 25.0% |
| !! | TCTTTGTTTAATGGAATGTA+AGG | + | chr7_2:75885571-75885590 | None:intergenic | 25.0% |
| ! | CAAAATATCAGTGAAAGATT+AGG | + | chr7_2:75885964-75885983 | None:intergenic | 25.0% |
| !!! | TCTTTCACTGATATTTTGAA+AGG | - | chr7_2:75885966-75885985 | Msa1077290:intron | 25.0% |
| !! | TGATATTTGGTATCGAATTT+CGG | + | chr7_2:75886161-75886180 | None:intergenic | 25.0% |
| ! | TTCATATGAATATTAGACTG+CGG | - | chr7_2:75886380-75886399 | Msa1077290:intron | 25.0% |
| ! | AATGGTCAAAAGAAAACAAA+TGG | - | chr7_2:75886588-75886607 | Msa1077290:CDS | 25.0% |
| !! | AACATTATGTCACACATTTT+AGG | - | chr7_2:75886764-75886783 | Msa1077290:CDS | 25.0% |
| !! | GTTTTACAGTTAAACCAAAA+TGG | + | chr7_2:75886890-75886909 | None:intergenic | 25.0% |
| !!! | GATTTTCATCAGCTTTATAA+TGG | + | chr7_2:75886994-75887013 | None:intergenic | 25.0% |
| !! | TAGTTACTTTGGATTCTATT+TGG | + | chr7_2:75887968-75887987 | None:intergenic | 25.0% |
| ! | ACATGATGAAATAGTTACTT+TGG | + | chr7_2:75887979-75887998 | None:intergenic | 25.0% |
| ! | TTCTTATAGACTTGATCAAA+TGG | - | chr7_2:75888363-75888382 | Msa1077290:intron | 25.0% |
| ! | ATGTGTCAAAGTATATTATG+TGG | - | chr7_2:75888929-75888948 | Msa1077290:CDS | 25.0% |
| ! | TGTGTCAAAGTATATTATGT+GGG | - | chr7_2:75888930-75888949 | Msa1077290:CDS | 25.0% |
| AATTAAATTGTTCAAGGAGC+CGG | + | chr7_2:75883127-75883146 | None:intergenic | 30.0% | |
| AAAATGTCGGAAACACAAAT+AGG | + | chr7_2:75883168-75883187 | None:intergenic | 30.0% | |
| ACTTGAAAGATAAAACTGTG+TGG | - | chr7_2:75883193-75883212 | Msa1077290:three_prime_UTR | 30.0% | |
| ATGGAAATCAAAGAGGATAT+AGG | - | chr7_2:75883216-75883235 | Msa1077290:three_prime_UTR | 30.0% | |
| TGGAAATCAAAGAGGATATA+GGG | - | chr7_2:75883217-75883236 | Msa1077290:three_prime_UTR | 30.0% | |
| GAGAAATTACTGAAAGAAGT+TGG | - | chr7_2:75883265-75883284 | Msa1077290:three_prime_UTR | 30.0% | |
| TGTATACGTGTGTATTCAAT+TGG | - | chr7_2:75883578-75883597 | Msa1077290:three_prime_UTR | 30.0% | |
| GTATACGTGTGTATTCAATT+GGG | - | chr7_2:75883579-75883598 | Msa1077290:three_prime_UTR | 30.0% | |
| TATACGTGTGTATTCAATTG+GGG | - | chr7_2:75883580-75883599 | Msa1077290:three_prime_UTR | 30.0% | |
| ! | TTGTTTGATGGTCTATTTAG+TGG | - | chr7_2:75883640-75883659 | Msa1077290:three_prime_UTR | 30.0% |
| ! | GCAAGGAAAACTTTTATCTT+AGG | + | chr7_2:75883798-75883817 | None:intergenic | 30.0% |
| ! | TTTGATTCATAGATTTGCTC+TGG | - | chr7_2:75883966-75883985 | Msa1077290:CDS | 30.0% |
| ! | TTGATTCATAGATTTGCTCT+GGG | - | chr7_2:75883967-75883986 | Msa1077290:CDS | 30.0% |
| CTATGTTCAAATAAGGAAGA+CGG | + | chr7_2:75884022-75884041 | None:intergenic | 30.0% | |
| ACGAACACTATGTTCAAATA+AGG | + | chr7_2:75884029-75884048 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTACTATCTTGTGG+TGG | + | chr7_2:75884252-75884271 | None:intergenic | 30.0% |
| !!! | GCATTTGTTTTACTATCTTG+TGG | + | chr7_2:75884255-75884274 | None:intergenic | 30.0% |
| ! | ATCAAGATCACTGTTTCTTA+AGG | + | chr7_2:75884277-75884296 | None:intergenic | 30.0% |
| TGATTTCACAACATGACTAA+AGG | - | chr7_2:75884293-75884312 | Msa1077290:CDS | 30.0% | |
| ! | AATAATTTTGCATGTTTGGG+CGG | + | chr7_2:75884503-75884522 | None:intergenic | 30.0% |
| ! | CCAGAATAATTTTGCATGTT+TGG | + | chr7_2:75884507-75884526 | None:intergenic | 30.0% |
| CCAAACATGCAAAATTATTC+TGG | - | chr7_2:75884504-75884523 | Msa1077290:CDS | 30.0% | |
| TAAGACAAAATAACTTCACG+TGG | + | chr7_2:75884652-75884671 | None:intergenic | 30.0% | |
| ! | TTCTTTCTGAATTTTTGCTG+TGG | + | chr7_2:75884716-75884735 | None:intergenic | 30.0% |
| !! | TTTTCTTCTATATAGTGGAG+GGG | - | chr7_2:75884744-75884763 | Msa1077290:CDS | 30.0% |
| TACAAATGAACTGTCCATAT+GGG | + | chr7_2:75884794-75884813 | None:intergenic | 30.0% | |
| ACCAAGAAATAACATTGAAG+AGG | - | chr7_2:75884813-75884832 | Msa1077290:intron | 30.0% | |
| ! | CGCTCTAAATAAAATTGAGT+CGG | - | chr7_2:75884870-75884889 | Msa1077290:intron | 30.0% |
| TTACTATCAATCGAAGAGAA+AGG | - | chr7_2:75884983-75885002 | Msa1077290:intron | 30.0% | |
| GGTTGAAAAATGTAATCAGT+TGG | - | chr7_2:75885161-75885180 | Msa1077290:intron | 30.0% | |
| TAATGGAATGTAAGGGAAAA+GGG | + | chr7_2:75885563-75885582 | None:intergenic | 30.0% | |
| TTAATGGAATGTAAGGGAAA+AGG | + | chr7_2:75885564-75885583 | None:intergenic | 30.0% | |
| ! | TGTGAGACTTCTTTGTTTAA+TGG | + | chr7_2:75885580-75885599 | None:intergenic | 30.0% |
| TGTTGAATACCTGTCAAAAA+TGG | + | chr7_2:75885775-75885794 | None:intergenic | 30.0% | |
| ATGTATCAGTACACTAACAT+AGG | + | chr7_2:75885803-75885822 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr7_2:75885830-75885849 | None:intergenic | 30.0% | |
| ATAAAACACTGATACAGACA+CGG | + | chr7_2:75886054-75886073 | None:intergenic | 30.0% | |
| TGGATTCTGTCATTCAAATT+AGG | - | chr7_2:75886465-75886484 | Msa1077290:intron | 30.0% | |
| GGATTCTGTCATTCAAATTA+GGG | - | chr7_2:75886466-75886485 | Msa1077290:intron | 30.0% | |
| TCAGAGAAATTGAGAACAAA+AGG | + | chr7_2:75886533-75886552 | None:intergenic | 30.0% | |
| !! | CAATTTCTCTGAGATTTCTT+TGG | - | chr7_2:75886541-75886560 | Msa1077290:intron | 30.0% |
| GAGAAGAAATTCTCAAGAAA+TGG | - | chr7_2:75886570-75886589 | Msa1077290:CDS | 30.0% | |
| AAAACAAATGGATACCTCTA+AGG | - | chr7_2:75886600-75886619 | Msa1077290:CDS | 30.0% | |
| AAACAAATGGATACCTCTAA+GGG | - | chr7_2:75886601-75886620 | Msa1077290:CDS | 30.0% | |
| CTTCTATACTTTGTTCTCAA+AGG | - | chr7_2:75886652-75886671 | Msa1077290:CDS | 30.0% | |
| ! | TCATCAGCTTTATAATGGTT+CGG | + | chr7_2:75886989-75887008 | None:intergenic | 30.0% |
| TAAATGGCTATAAACCAATG+TGG | - | chr7_2:75887088-75887107 | Msa1077290:CDS | 30.0% | |
| GGATTGGATTAATGTAGAAT+TGG | + | chr7_2:75887205-75887224 | None:intergenic | 30.0% | |
| ! | CAAAATACTCTCCTTTTTCT+AGG | + | chr7_2:75887371-75887390 | None:intergenic | 30.0% |
| TTCTCAAGATTATTCTTCCT+TGG | - | chr7_2:75887392-75887411 | Msa1077290:intron | 30.0% | |
| TAATCAGAGCTTGTGAAAAA+CGG | + | chr7_2:75887591-75887610 | None:intergenic | 30.0% | |
| GCTTTCAAAATCAAGTTCTT+CGG | - | chr7_2:75887673-75887692 | Msa1077290:intron | 30.0% | |
| AAAATCAAGTTCTTCGGAAA+GGG | - | chr7_2:75887679-75887698 | Msa1077290:intron | 30.0% | |
| TACAAAATCCAAACATTGGA+AGG | - | chr7_2:75888038-75888057 | Msa1077290:CDS | 30.0% | |
| ! | TTAAGCTTGTCATGTTTTCA+GGG | + | chr7_2:75888105-75888124 | None:intergenic | 30.0% |
| TTAAGTGGTAATAACCATGA+AGG | - | chr7_2:75888121-75888140 | Msa1077290:CDS | 30.0% | |
| !!! | TTCTATAATGATTTTTGGCG+TGG | + | chr7_2:75888188-75888207 | None:intergenic | 30.0% |
| ! | GGTGCTTCTATAATGATTTT+TGG | + | chr7_2:75888193-75888212 | None:intergenic | 30.0% |
| ACTAATACTGAAAATGATCC+AGG | + | chr7_2:75888226-75888245 | None:intergenic | 30.0% | |
| ! | CATTTTCAGTATTAGTTCCA+TGG | - | chr7_2:75888230-75888249 | Msa1077290:intron | 30.0% |
| GACAGAGAAAATCTTAGAAT+TGG | - | chr7_2:75888385-75888404 | Msa1077290:intron | 30.0% | |
| TTGGATTAAGGAAGTCTTTA+AGG | - | chr7_2:75888404-75888423 | Msa1077290:intron | 30.0% | |
| !! | AAGGAAGTCTTTAAGGATTT+TGG | - | chr7_2:75888411-75888430 | Msa1077290:intron | 30.0% |
| GATGGACAAAAAATCAAATG+TGG | - | chr7_2:75888472-75888491 | Msa1077290:intron | 30.0% | |
| GACAAAAAATCAAATGTGGA+GGG | - | chr7_2:75888476-75888495 | Msa1077290:intron | 30.0% | |
| !! | TTTAGTTCTGCACATCAAAT+GGG | - | chr7_2:75888580-75888599 | Msa1077290:intron | 30.0% |
| !! | GAGTGGTATTTTGAACTATG+AGG | - | chr7_2:75883036-75883055 | Msa1077290:three_prime_UTR | 35.0% |
| !! | GGTATTTTGAACTATGAGGT+TGG | - | chr7_2:75883040-75883059 | Msa1077290:three_prime_UTR | 35.0% |
| TGGATTTCTTTGCTCTTTGA+TGG | - | chr7_2:75883060-75883079 | Msa1077290:three_prime_UTR | 35.0% | |
| ! | GATTTGCTCTATTGTTTAGC+CGG | - | chr7_2:75883105-75883124 | Msa1077290:three_prime_UTR | 35.0% |
| GAAAGATAAAACTGTGTGGA+TGG | - | chr7_2:75883197-75883216 | Msa1077290:three_prime_UTR | 35.0% | |
| AGAAGTTGGAAAAATCTCAC+CGG | - | chr7_2:75883279-75883298 | Msa1077290:three_prime_UTR | 35.0% | |
| TACGTAGTCTCTACAGTATA+AGG | + | chr7_2:75883411-75883430 | None:intergenic | 35.0% | |
| ACTCAACCTTCCACAAATAA+AGG | + | chr7_2:75883496-75883515 | None:intergenic | 35.0% | |
| TGATGCATGTAGTTGTTTGA+TGG | - | chr7_2:75883628-75883647 | Msa1077290:three_prime_UTR | 35.0% | |
| GTTAGGGAGATATGAATATC+AGG | - | chr7_2:75883713-75883732 | Msa1077290:three_prime_UTR | 35.0% | |
| TACAGCTGGATTACTATTAG+AGG | - | chr7_2:75883881-75883900 | Msa1077290:CDS | 35.0% | |
| ! | CATTAGCACTTTTACTCTTC+AGG | - | chr7_2:75884222-75884241 | Msa1077290:CDS | 35.0% |
| TCAGAATTCAAAGGAAATGC+CGG | + | chr7_2:75884395-75884414 | None:intergenic | 35.0% | |
| CTTGATTGAGTCTTCTTTAC+CGG | - | chr7_2:75884528-75884547 | Msa1077290:CDS | 35.0% | |
| AGTCTCCTGCAATTTACATT+CGG | + | chr7_2:75884578-75884597 | None:intergenic | 35.0% | |
| TTGAGCTACTTCCAGAATTA+TGG | - | chr7_2:75884611-75884630 | Msa1077290:CDS | 35.0% | |
| TCAGCAAGTTTCCATAATTC+TGG | + | chr7_2:75884625-75884644 | None:intergenic | 35.0% | |
| GTACAAATGAACTGTCCATA+TGG | + | chr7_2:75884795-75884814 | None:intergenic | 35.0% | |
| !! | GCCTCTTCAATGTTATTTCT+TGG | + | chr7_2:75884817-75884836 | None:intergenic | 35.0% |
| AAACCGATAGAGCAAATGAA+AGG | + | chr7_2:75884915-75884934 | None:intergenic | 35.0% | |
| ! | CTCTTCGATTGATAGTAACA+GGG | + | chr7_2:75884981-75885000 | None:intergenic | 35.0% |
| ! | TCTCTTCGATTGATAGTAAC+AGG | + | chr7_2:75884982-75885001 | None:intergenic | 35.0% |
| ! | AACAAAGCAGGAACATGTTT+TGG | + | chr7_2:75885060-75885079 | None:intergenic | 35.0% |
| ! | ACATGTTCCTGCTTTGTTAA+TGG | - | chr7_2:75885062-75885081 | Msa1077290:intron | 35.0% |
| TTAGAAGCCATTAACAAAGC+AGG | + | chr7_2:75885072-75885091 | None:intergenic | 35.0% | |
| AGTCTAGCCAATTTCTTACT+CGG | - | chr7_2:75885186-75885205 | Msa1077290:intron | 35.0% | |
| TGTGATTGCAAAAAGAGCAA+TGG | - | chr7_2:75885435-75885454 | Msa1077290:CDS | 35.0% | |
| AAAGAGAAAGGTTATAGCCA+TGG | - | chr7_2:75885493-75885512 | Msa1077290:intron | 35.0% | |
| TCTGAGAGGTTAAAAATCCA+TGG | + | chr7_2:75885513-75885532 | None:intergenic | 35.0% | |
| AAGTTGAATAGAAGGATGAG+AGG | + | chr7_2:75885612-75885631 | None:intergenic | 35.0% | |
| TCATCCTTCTATTCAACTTC+TGG | - | chr7_2:75885613-75885632 | Msa1077290:intron | 35.0% | |
| AGAACCAGAAGTTGAATAGA+AGG | + | chr7_2:75885620-75885639 | None:intergenic | 35.0% | |
| AAAGAACCTCATCAGGAAAT+GGG | + | chr7_2:75885648-75885667 | None:intergenic | 35.0% | |
| AAAAGAACCTCATCAGGAAA+TGG | + | chr7_2:75885649-75885668 | None:intergenic | 35.0% | |
| !! | TCAAAAATGGTGGATGCTAT+AGG | + | chr7_2:75885762-75885781 | None:intergenic | 35.0% |
| TGAATACCTGTCAAAAATGG+TGG | + | chr7_2:75885772-75885791 | None:intergenic | 35.0% | |
| CGACACTAACATATTGATAC+CGG | + | chr7_2:75885868-75885887 | None:intergenic | 35.0% | |
| CGGTATCAATATGTTAGTGT+CGG | - | chr7_2:75885866-75885885 | Msa1077290:intron | 35.0% | |
| ! | AGCTAATGTTGTTGTTCAAG+AGG | - | chr7_2:75886403-75886422 | Msa1077290:intron | 35.0% |
| !!! | TTAGGGACACTTTTTCTTTG+TGG | - | chr7_2:75886483-75886502 | Msa1077290:intron | 35.0% |
| AAAAGTTGAAACCGAAGAAG+AGG | - | chr7_2:75887142-75887161 | Msa1077290:CDS | 35.0% | |
| ATCCAATCCCTGAATGAAAA+AGG | - | chr7_2:75887216-75887235 | Msa1077290:CDS | 35.0% | |
| !! | TTCAAGGCCTTTTTCATTCA+GGG | + | chr7_2:75887226-75887245 | None:intergenic | 35.0% |
| AAATGCGATGTTGTCATTGT+TGG | - | chr7_2:75887282-75887301 | Msa1077290:CDS | 35.0% | |
| AGAGTGATCATCCTAGAAAA+AGG | - | chr7_2:75887357-75887376 | Msa1077290:CDS | 35.0% | |
| ! | ATCATTTTACCGTCAAGAGT+TGG | + | chr7_2:75887462-75887481 | None:intergenic | 35.0% |
| GGTAAAATGATGATCTTAGC+TGG | - | chr7_2:75887471-75887490 | Msa1077290:intron | 35.0% | |
| CTCTGATTATCAATCTGCTA+TGG | - | chr7_2:75887602-75887621 | Msa1077290:intron | 35.0% | |
| TTATCAATCTGCTATGGACT+CGG | - | chr7_2:75887608-75887627 | Msa1077290:intron | 35.0% | |
| CAAAATCAAGTTCTTCGGAA+AGG | - | chr7_2:75887678-75887697 | Msa1077290:intron | 35.0% | |
| GCTTCAGAAGATCATTATTG+TGG | - | chr7_2:75887744-75887763 | Msa1077290:intron | 35.0% | |
| TGTAGAACCGGAGATAAAAA+AGG | - | chr7_2:75887783-75887802 | Msa1077290:intron | 35.0% | |
| !!! | GTCAGTACCTTTTTTATCTC+CGG | + | chr7_2:75887793-75887812 | None:intergenic | 35.0% |
| !! | AAAAAGGTACTGACTCAACT+TGG | - | chr7_2:75887799-75887818 | Msa1077290:intron | 35.0% |
| ! | TTGGTTGATGCTGTTGAAAA+CGG | - | chr7_2:75887822-75887841 | Msa1077290:intron | 35.0% |
| ACAAAGAGAAAGAATTGCTC+AGG | - | chr7_2:75887897-75887916 | Msa1077290:intron | 35.0% | |
| ! | AAATCATTAGAGGAGGTGTA+AGG | + | chr7_2:75888009-75888028 | None:intergenic | 35.0% |
| AGTCCACTAGAAATCATTAG+AGG | + | chr7_2:75888019-75888038 | None:intergenic | 35.0% | |
| GGACTACAAAATCCAAACAT+TGG | - | chr7_2:75888034-75888053 | Msa1077290:CDS | 35.0% | |
| TGAAGATTCCTTCCAATGTT+TGG | + | chr7_2:75888049-75888068 | None:intergenic | 35.0% | |
| ! | CTTAAGCTTGTCATGTTTTC+AGG | + | chr7_2:75888106-75888125 | None:intergenic | 35.0% |
| GAAAACATGACAAGCTTAAG+TGG | - | chr7_2:75888106-75888125 | Msa1077290:CDS | 35.0% | |
| AAGTTATGATTCCTCCTTCA+TGG | + | chr7_2:75888138-75888157 | None:intergenic | 35.0% | |
| !! | ATTATAGAAGCACCTGCTTT+AGG | - | chr7_2:75888199-75888218 | Msa1077290:intron | 35.0% |
| ACTCGATATGAAAGACAGAA+TGG | - | chr7_2:75888261-75888280 | Msa1077290:intron | 35.0% | |
| ! | AACTGCTAACCTTTTTGCAT+TGG | - | chr7_2:75888297-75888316 | Msa1077290:intron | 35.0% |
| TGTCTCTAACCAATGCAAAA+AGG | + | chr7_2:75888309-75888328 | None:intergenic | 35.0% | |
| !! | TTTGCATTGGTTAGAGACAT+AGG | - | chr7_2:75888310-75888329 | Msa1077290:intron | 35.0% |
| !!! | GTCTTTAAGGATTTTGGTTG+CGG | - | chr7_2:75888417-75888436 | Msa1077290:intron | 35.0% |
| GGACAAAAAATCAAATGTGG+AGG | - | chr7_2:75888475-75888494 | Msa1077290:intron | 35.0% | |
| !! | GTTTAGTTCTGCACATCAAA+TGG | - | chr7_2:75888579-75888598 | Msa1077290:intron | 35.0% |
| TCAAATGGGAAGTTGTAGAA+TGG | - | chr7_2:75888594-75888613 | Msa1077290:intron | 35.0% | |
| CAAATGGGAAGTTGTAGAAT+GGG | - | chr7_2:75888595-75888614 | Msa1077290:intron | 35.0% | |
| AATGGGTAAGAATGAAGAAG+AGG | - | chr7_2:75888612-75888631 | Msa1077290:intron | 35.0% | |
| ATGGGTAAGAATGAAGAAGA+GGG | - | chr7_2:75888613-75888632 | Msa1077290:intron | 35.0% | |
| TTGATGAGAATGGAGAAAGT+TGG | - | chr7_2:75888641-75888660 | Msa1077290:intron | 35.0% | |
| TGATGAGAATGGAGAAAGTT+GGG | - | chr7_2:75888642-75888661 | Msa1077290:intron | 35.0% | |
| TAGACTGAATGGTTACCATA+GGG | + | chr7_2:75888726-75888745 | None:intergenic | 35.0% | |
| GCAAGAGATTCCGATGAATT+GGG | + | chr7_2:75882905-75882924 | None:intergenic | 40.0% | |
| TGCAAGAGATTCCGATGAAT+TGG | + | chr7_2:75882906-75882925 | None:intergenic | 40.0% | |
| ATCGGAATCTCTTGCAACTA+AGG | - | chr7_2:75882910-75882929 | Msa1077290:three_prime_UTR | 40.0% | |
| TATTATTCCTCGACTGCAAG+TGG | - | chr7_2:75882935-75882954 | Msa1077290:three_prime_UTR | 40.0% | |
| ATTATTCCTCGACTGCAAGT+GGG | - | chr7_2:75882936-75882955 | Msa1077290:three_prime_UTR | 40.0% | |
| TGTGTGGATGGAAATCAAAG+AGG | - | chr7_2:75883209-75883228 | Msa1077290:three_prime_UTR | 40.0% | |
| !! | CTACAGTATAAGGAAGCACT+TGG | + | chr7_2:75883401-75883420 | None:intergenic | 40.0% |
| ! | TAAGTCCCTGCCTTTATTTG+TGG | - | chr7_2:75883483-75883502 | Msa1077290:three_prime_UTR | 40.0% |
| ACCTTCCACAAATAAAGGCA+GGG | + | chr7_2:75883491-75883510 | None:intergenic | 40.0% | |
| AACCTTCCACAAATAAAGGC+AGG | + | chr7_2:75883492-75883511 | None:intergenic | 40.0% | |
| CGTATACACATAACAGACTG+AGG | + | chr7_2:75883566-75883585 | None:intergenic | 40.0% | |
| ! | TTGGGGTCTGTGATTTCTTT+TGG | - | chr7_2:75883597-75883616 | Msa1077290:three_prime_UTR | 40.0% |
| !! | AGGAAGCTAGAGCTTTGTTA+GGG | - | chr7_2:75883697-75883716 | Msa1077290:three_prime_UTR | 40.0% |
| GGGAGATATGAATATCAGGA+AGG | - | chr7_2:75883717-75883736 | Msa1077290:three_prime_UTR | 40.0% | |
| GCCTTCAAAAACATGCAAAG+CGG | + | chr7_2:75883754-75883773 | None:intergenic | 40.0% | |
| GCTGTATGTATAGACATTGG+TGG | + | chr7_2:75883867-75883886 | None:intergenic | 40.0% | |
| CCAGCTGTATGTATAGACAT+TGG | + | chr7_2:75883870-75883889 | None:intergenic | 40.0% | |
| CCAATGTCTATACATACAGC+TGG | - | chr7_2:75883867-75883886 | Msa1077290:CDS | 40.0% | |
| ATTAGAGGCGATCTTGCTAA+AGG | - | chr7_2:75883896-75883915 | Msa1077290:CDS | 40.0% | |
| GCTAAAGGCAAAATGTTTGC+AGG | - | chr7_2:75883911-75883930 | Msa1077290:CDS | 40.0% | |
| AATGTTTGCAGGTTCTTGCA+AGG | - | chr7_2:75883922-75883941 | Msa1077290:CDS | 40.0% | |
| !!! | AGTTTTTTCCTTCTGCTGCT+TGG | - | chr7_2:75884130-75884149 | Msa1077290:CDS | 40.0% |
| !! | TAAAAGTGCTAATGCCACAC+TGG | + | chr7_2:75884216-75884235 | None:intergenic | 40.0% |
| ATTGAGTCTTCTTTACCGGA+AGG | - | chr7_2:75884532-75884551 | Msa1077290:CDS | 40.0% | |
| TGGTTCCGAATGTAAATTGC+AGG | - | chr7_2:75884570-75884589 | Msa1077290:CDS | 40.0% | |
| ATTGCAGGAGACTCTAAGTA+AGG | - | chr7_2:75884585-75884604 | Msa1077290:CDS | 40.0% | |
| CATCAAGATTCCATCGATGA+AGG | + | chr7_2:75884687-75884706 | None:intergenic | 40.0% | |
| ATATGGGAACGAAGATCTGA+GGG | + | chr7_2:75884778-75884797 | None:intergenic | 40.0% | |
| TGAGTCGGATCCTTCAATAA+TGG | - | chr7_2:75884885-75884904 | Msa1077290:intron | 40.0% | |
| !! | GAAAGGTGCTCCATTATTGA+AGG | + | chr7_2:75884898-75884917 | None:intergenic | 40.0% |
| GCACCTTTCATTTGCTCTAT+CGG | - | chr7_2:75884909-75884928 | Msa1077290:intron | 40.0% | |
| !! | TCATTTGCTCTATCGGTTTC+CGG | - | chr7_2:75884916-75884935 | Msa1077290:intron | 40.0% |
| GAGTAATTCTTCCCATTGGT+TGG | + | chr7_2:75884959-75884978 | None:intergenic | 40.0% | |
| TAAGAAGATTAAGTGCCACC+AGG | + | chr7_2:75885011-75885030 | None:intergenic | 40.0% | |
| AAAGTTGTTGAGTAGCAGTG+AGG | - | chr7_2:75885032-75885051 | Msa1077290:intron | 40.0% | |
| CGAAACACCGAGTAAGAAAT+TGG | + | chr7_2:75885196-75885215 | None:intergenic | 40.0% | |
| !! | TTGCTGTTTCTAACTCTGAG+AGG | - | chr7_2:75885235-75885254 | Msa1077290:CDS | 40.0% |
| TGCAAGCACTATGACCAAAA+TGG | - | chr7_2:75885296-75885315 | Msa1077290:CDS | 40.0% | |
| GCAAGCACTATGACCAAAAT+GGG | - | chr7_2:75885297-75885316 | Msa1077290:CDS | 40.0% | |
| ! | TAGGATGACACAACCCATTT+TGG | + | chr7_2:75885313-75885332 | None:intergenic | 40.0% |
| GATTCTCATCCTCTATTGAG+AGG | - | chr7_2:75885460-75885479 | Msa1077290:CDS | 40.0% | |
| AACCTCTCAGATGCATGTAT+TGG | - | chr7_2:75885522-75885541 | Msa1077290:intron | 40.0% | |
| !! | TAGCATCCACCATTTTTGAC+AGG | - | chr7_2:75885763-75885782 | Msa1077290:intron | 40.0% |
| AACTGAAACTGCTATGCAGT+CGG | - | chr7_2:75886117-75886136 | Msa1077290:intron | 40.0% | |
| TAGATCATCTTGCAAGAGCA+TGG | - | chr7_2:75886284-75886303 | Msa1077290:intron | 40.0% | |
| ! | AGATCATCTTGCAAGAGCAT+GGG | - | chr7_2:75886285-75886304 | Msa1077290:intron | 40.0% |
| TGTGGAACTCTTTCTTGCAT+TGG | - | chr7_2:75886501-75886520 | Msa1077290:intron | 40.0% | |
| ACTCTTTCTTGCATTGGAAG+TGG | - | chr7_2:75886507-75886526 | Msa1077290:intron | 40.0% | |
| ! | TCGAAACACAGTTCCCATTT+TGG | - | chr7_2:75886873-75886892 | Msa1077290:CDS | 40.0% |
| ACATCTGTCTGCAGCAATTA+GGG | + | chr7_2:75887069-75887088 | None:intergenic | 40.0% | |
| TACATCTGTCTGCAGCAATT+AGG | + | chr7_2:75887070-75887089 | None:intergenic | 40.0% | |
| TTGCTGCAGACAGATGTAAA+TGG | - | chr7_2:75887072-75887091 | Msa1077290:CDS | 40.0% | |
| TGGCTATAAACCAATGTGGA+AGG | - | chr7_2:75887092-75887111 | Msa1077290:CDS | 40.0% | |
| AAACCAATGTGGAAGGCAAT+AGG | - | chr7_2:75887099-75887118 | Msa1077290:CDS | 40.0% | |
| AACCAATGTGGAAGGCAATA+GGG | - | chr7_2:75887100-75887119 | Msa1077290:CDS | 40.0% | |
| TTGTCTCTATTAGTCCTTCC+TGG | + | chr7_2:75887173-75887192 | None:intergenic | 40.0% | |
| !! | CTTCAAGGCCTTTTTCATTC+AGG | + | chr7_2:75887227-75887246 | None:intergenic | 40.0% |
| CTTCATCTTCAGTGACTTCA+AGG | + | chr7_2:75887242-75887261 | None:intergenic | 40.0% | |
| !! | GATGTTGTCATTGTTGGTTC+CGG | - | chr7_2:75887288-75887307 | Msa1077290:CDS | 40.0% |
| AACAAGCTCTACGAATCATG+TGG | - | chr7_2:75887429-75887448 | Msa1077290:intron | 40.0% | |
| TGGAGGTTCAGCTATAAACT+GGG | - | chr7_2:75887506-75887525 | Msa1077290:intron | 40.0% | |
| AACACCTGACTCTGTTAAGA+AGG | - | chr7_2:75887542-75887561 | Msa1077290:intron | 40.0% | |
| CATTCCTTCTTAACAGAGTC+AGG | + | chr7_2:75887549-75887568 | None:intergenic | 40.0% | |
| CTGACTCTGTTAAGAAGGAA+TGG | - | chr7_2:75887547-75887566 | Msa1077290:intron | 40.0% | |
| ! | TATTGTGGTTCGTGCTGTTA+CGG | - | chr7_2:75887759-75887778 | Msa1077290:intron | 40.0% |
| GAATTTCTCAGCTCTACATC+CGG | + | chr7_2:75887862-75887881 | None:intergenic | 40.0% | |
| CCACTAGAAATCATTAGAGG+AGG | + | chr7_2:75888016-75888035 | None:intergenic | 40.0% | |
| ! | CCTCCTCTAATGATTTCTAG+TGG | - | chr7_2:75888013-75888032 | Msa1077290:CDS | 40.0% |
| CAAGCAAATTGAACTGGATG+GGG | + | chr7_2:75888073-75888092 | None:intergenic | 40.0% | |
| CCAAGCAAATTGAACTGGAT+GGG | + | chr7_2:75888074-75888093 | None:intergenic | 40.0% | |
| ! | CCATCCAGTTCAATTTGCTT+GGG | - | chr7_2:75888072-75888091 | Msa1077290:CDS | 40.0% |
| ! | CATCCAGTTCAATTTGCTTG+GGG | - | chr7_2:75888073-75888092 | Msa1077290:CDS | 40.0% |
| AGTGGTAATAACCATGAAGG+AGG | - | chr7_2:75888124-75888143 | Msa1077290:CDS | 40.0% | |
| GTATTAGTTCCATGGATCTC+AGG | - | chr7_2:75888238-75888257 | Msa1077290:intron | 40.0% | |
| TTGGTTAGAGACATAGGATC+AGG | - | chr7_2:75888316-75888335 | Msa1077290:intron | 40.0% | |
| TCAGGAGAAGTAAGAAGTGA+AGG | - | chr7_2:75888334-75888353 | Msa1077290:intron | 40.0% | |
| !!! | TTTAAGGATTTTGGTTGCGG+CGG | - | chr7_2:75888420-75888439 | Msa1077290:intron | 40.0% |
| CTGTTGAGGTTGGAACTTAT+AGG | - | chr7_2:75888446-75888465 | Msa1077290:intron | 40.0% | |
| GTTGGAACTTATAGGAGTGA+TGG | - | chr7_2:75888454-75888473 | Msa1077290:intron | 40.0% | |
| ACAGTATCAAGAAACTCCTC+CGG | + | chr7_2:75888514-75888533 | None:intergenic | 40.0% | |
| GGAGTTTCTTGATACTGTCA+CGG | - | chr7_2:75888516-75888535 | Msa1077290:intron | 40.0% | |
| GAGAAAGTTGGGAAGCAAAA+GGG | - | chr7_2:75888653-75888672 | Msa1077290:intron | 40.0% | |
| AAAGGGTTGTATGTGTGTGA+TGG | - | chr7_2:75888670-75888689 | Msa1077290:intron | 40.0% | |
| GTAGACTGAATGGTTACCAT+AGG | + | chr7_2:75888727-75888746 | None:intergenic | 40.0% | |
| ACAGTATGCTGTAGACTGAA+TGG | + | chr7_2:75888737-75888756 | None:intergenic | 40.0% | |
| !! | AGTGGGATTTCTGGTCAAGA+TGG | - | chr7_2:75882953-75882972 | Msa1077290:three_prime_UTR | 45.0% |
| ! | GTCAAGATGGACAAGTTGAG+AGG | - | chr7_2:75882966-75882985 | Msa1077290:three_prime_UTR | 45.0% |
| ! | AAGATGGACAAGTTGAGAGG+AGG | - | chr7_2:75882969-75882988 | Msa1077290:three_prime_UTR | 45.0% |
| ! | TCCCTGCCTTTATTTGTGGA+AGG | - | chr7_2:75883487-75883506 | Msa1077290:three_prime_UTR | 45.0% |
| TGCAGATCATAGGTGTGTAG+TGG | + | chr7_2:75883678-75883697 | None:intergenic | 45.0% | |
| ACTACACACCTATGATCTGC+AGG | - | chr7_2:75883677-75883696 | Msa1077290:three_prime_UTR | 45.0% | |
| ! | TCTAGCTTCCTGCAGATCAT+AGG | + | chr7_2:75883688-75883707 | None:intergenic | 45.0% |
| !! | CAGGAAGCTAGAGCTTTGTT+AGG | - | chr7_2:75883696-75883715 | Msa1077290:three_prime_UTR | 45.0% |
| !! | GCCGCTTTGCATGTTTTTGA+AGG | - | chr7_2:75883750-75883769 | Msa1077290:three_prime_UTR | 45.0% |
| CAGGTTCTTGCAAGGTTTGA+AGG | - | chr7_2:75883930-75883949 | Msa1077290:CDS | 45.0% | |
| AAGCTAAACCAAGCAGCAGA+AGG | + | chr7_2:75884141-75884160 | None:intergenic | 45.0% | |
| AAGTTTCCAGGTAAGCCTTC+CGG | + | chr7_2:75884550-75884569 | None:intergenic | 45.0% | |
| GAAGGCTTACCTGGAAACTT+TGG | - | chr7_2:75884550-75884569 | Msa1077290:CDS | 45.0% | |
| CATTCGGAACCAAAGTTTCC+AGG | + | chr7_2:75884562-75884581 | None:intergenic | 45.0% | |
| CATATGGGAACGAAGATCTG+AGG | + | chr7_2:75884779-75884798 | None:intergenic | 45.0% | |
| CTCAGATCTTCGTTCCCATA+TGG | - | chr7_2:75884777-75884796 | Msa1077290:CDS | 45.0% | |
| !! | CATTTGCTCTATCGGTTTCC+GGG | - | chr7_2:75884917-75884936 | Msa1077290:intron | 45.0% |
| !! | ATTTGCTCTATCGGTTTCCG+GGG | - | chr7_2:75884918-75884937 | Msa1077290:intron | 45.0% |
| ! | TGACAGCTTTAGCCAACCAA+TGG | - | chr7_2:75884944-75884963 | Msa1077290:intron | 45.0% |
| ! | GACAGCTTTAGCCAACCAAT+GGG | - | chr7_2:75884945-75884964 | Msa1077290:intron | 45.0% |
| CAGGGAGTAATTCTTCCCAT+TGG | + | chr7_2:75884963-75884982 | None:intergenic | 45.0% | |
| !! | CAATCGAAGAGAAAGGTACC+TGG | - | chr7_2:75884990-75885009 | Msa1077290:intron | 45.0% |
| AACCCTGACCTTGCAAAAGA+TGG | - | chr7_2:75885105-75885124 | Msa1077290:intron | 45.0% | |
| ACCCTGACCTTGCAAAAGAT+GGG | - | chr7_2:75885106-75885125 | Msa1077290:intron | 45.0% | |
| ! | AGCTAACCCCATCTTTTGCA+AGG | + | chr7_2:75885116-75885135 | None:intergenic | 45.0% |
| TCTCATCCTCTATTGAGAGG+AGG | - | chr7_2:75885463-75885482 | Msa1077290:CDS | 45.0% | |
| GGAGGTAGAGGAAAAGAGAA+AGG | - | chr7_2:75885481-75885500 | Msa1077290:intron | 45.0% | |
| AGCCAATACATGCATCTGAG+AGG | + | chr7_2:75885527-75885546 | None:intergenic | 45.0% | |
| !! | AGGGAAAAGGGTGTCACATA+TGG | + | chr7_2:75885551-75885570 | None:intergenic | 45.0% |
| TCAGTTCCCATTTCCTGATG+AGG | - | chr7_2:75885639-75885658 | Msa1077290:intron | 45.0% | |
| GGTGGAAAAAGAACCTCATC+AGG | + | chr7_2:75885655-75885674 | None:intergenic | 45.0% | |
| CATAGAATCCACCTCACCAA+TGG | + | chr7_2:75886447-75886466 | None:intergenic | 45.0% | |
| ! | CATTGGTGAGGTGGATTCTA+TGG | - | chr7_2:75886445-75886464 | Msa1077290:intron | 45.0% |
| ! | CAAATGGATACCTCTAAGGG+CGG | - | chr7_2:75886604-75886623 | Msa1077290:CDS | 45.0% |
| TACCCTATTGCCTTCCACAT+TGG | + | chr7_2:75887105-75887124 | None:intergenic | 45.0% | |
| TCTATTAGTCCTTCCTGGAG+AGG | + | chr7_2:75887168-75887187 | None:intergenic | 45.0% | |
| !! | GGCCTTTTTCATTCAGGGAT+TGG | + | chr7_2:75887221-75887240 | None:intergenic | 45.0% |
| GCTGCAATTCTTGCAAACTC+AGG | - | chr7_2:75887330-75887349 | Msa1077290:CDS | 45.0% | |
| GTTCATCGCTGAACTTTCCA+AGG | + | chr7_2:75887412-75887431 | None:intergenic | 45.0% | |
| GGAATCATGCCAACTCTTGA+CGG | - | chr7_2:75887450-75887469 | Msa1077290:intron | 45.0% | |
| ! | ATCTTAGCTGGCTCAACAGT+CGG | - | chr7_2:75887483-75887502 | Msa1077290:intron | 45.0% |
| GTGGAGGTTCAGCTATAAAC+TGG | - | chr7_2:75887505-75887524 | Msa1077290:intron | 45.0% | |
| TGCTGTTACGGTTGTAGAAC+CGG | - | chr7_2:75887771-75887790 | Msa1077290:intron | 45.0% | |
| !! | AGGTACTGACTCAACTTGGT+TGG | - | chr7_2:75887803-75887822 | Msa1077290:intron | 45.0% |
| GAGTGATTGCTGCAACAAGT+TGG | - | chr7_2:75887919-75887938 | Msa1077290:intron | 45.0% | |
| ! | TGATTGCTGCAACAAGTTGG+AGG | - | chr7_2:75887922-75887941 | Msa1077290:intron | 45.0% |
| ! | CCCATCCAGTTCAATTTGCT+TGG | - | chr7_2:75888071-75888090 | Msa1077290:CDS | 45.0% |
| CCCAAGCAAATTGAACTGGA+TGG | + | chr7_2:75888075-75888094 | None:intergenic | 45.0% | |
| TAGCCCCAAGCAAATTGAAC+TGG | + | chr7_2:75888079-75888098 | None:intergenic | 45.0% | |
| AATGATCCAGGTCCTAAAGC+AGG | + | chr7_2:75888214-75888233 | None:intergenic | 45.0% | |
| ATATCGAGTCCTGAGATCCA+TGG | + | chr7_2:75888250-75888269 | None:intergenic | 45.0% | |
| !!! | TTAAGGATTTTGGTTGCGGC+GGG | - | chr7_2:75888421-75888440 | Msa1077290:intron | 45.0% |
| TGGAGGGATCAAAGAAGAAC+CGG | - | chr7_2:75888492-75888511 | Msa1077290:intron | 45.0% | |
| CAAAGTTCACTTCTAGACCG+CGG | + | chr7_2:75888553-75888572 | None:intergenic | 45.0% | |
| GGAGAAAGTTGGGAAGCAAA+AGG | - | chr7_2:75888652-75888671 | Msa1077290:intron | 45.0% | |
| ! | AGTGTTTTGCCTAGTGCAGT+TGG | - | chr7_2:75888694-75888713 | Msa1077290:intron | 45.0% |
| !! | TGCAGTTGGTGTTAACCCTA+TGG | - | chr7_2:75888708-75888727 | Msa1077290:intron | 45.0% |
| AGAAATCCCACTTGCAGTCG+AGG | + | chr7_2:75882945-75882964 | None:intergenic | 50.0% | |
| TCGACTGCAAGTGGGATTTC+TGG | - | chr7_2:75882944-75882963 | Msa1077290:three_prime_UTR | 50.0% | |
| !! | GGGGTTCTCTACTTTTGGCA+AGG | + | chr7_2:75883815-75883834 | None:intergenic | 50.0% |
| ! | CTTGGGGGGTTCTCTACTTT+TGG | + | chr7_2:75883820-75883839 | None:intergenic | 50.0% |
| !! | TGATTCCGAGAGCGTCTCTT+GGG | + | chr7_2:75883837-75883856 | None:intergenic | 50.0% |
| ACTGCAATTCTGCTCCAGTG+TGG | - | chr7_2:75884199-75884218 | Msa1077290:CDS | 50.0% | |
| TCTTTACCGGAAGGCTTACC+TGG | - | chr7_2:75884541-75884560 | Msa1077290:CDS | 50.0% | |
| GGAATGCACTCCTTCATCGA+TGG | - | chr7_2:75884674-75884693 | Msa1077290:CDS | 50.0% | |
| !! | TCGAAGAGAAAGGTACCTGG+TGG | - | chr7_2:75884993-75885012 | Msa1077290:intron | 50.0% |
| ! | CCCCATCTTTTGCAAGGTCA+GGG | + | chr7_2:75885110-75885129 | None:intergenic | 50.0% |
| CCCTGACCTTGCAAAAGATG+GGG | - | chr7_2:75885107-75885126 | Msa1077290:intron | 50.0% | |
| ! | ACCCCATCTTTTGCAAGGTC+AGG | + | chr7_2:75885111-75885130 | None:intergenic | 50.0% |
| CCTCTACCTCCTCTCAATAG+AGG | + | chr7_2:75885472-75885491 | None:intergenic | 50.0% | |
| CCTCTATTGAGAGGAGGTAG+AGG | - | chr7_2:75885469-75885488 | Msa1077290:CDS | 50.0% | |
| ! | TGCAGTCTGAGACGTAGATG+TGG | - | chr7_2:75886003-75886022 | Msa1077290:intron | 50.0% |
| AGATGTGGACGTGTCTATGC+CGG | - | chr7_2:75886018-75886037 | Msa1077290:intron | 50.0% | |
| TGCACCAGAAGCAATGCCAT+TGG | - | chr7_2:75886428-75886447 | Msa1077290:intron | 50.0% | |
| CTCACCAATGGCATTGCTTC+TGG | + | chr7_2:75886435-75886454 | None:intergenic | 50.0% | |
| CAGAAGCAATGCCATTGGTG+AGG | - | chr7_2:75886433-75886452 | Msa1077290:intron | 50.0% | |
| AAGCAATGCCATTGGTGAGG+TGG | - | chr7_2:75886436-75886455 | Msa1077290:intron | 50.0% | |
| GTGGAAGGCAATAGGGTACA+AGG | - | chr7_2:75887107-75887126 | Msa1077290:CDS | 50.0% | |
| GAAGGCAATAGGGTACAAGG+TGG | - | chr7_2:75887110-75887129 | Msa1077290:CDS | 50.0% | |
| !! | GTCATTGTTGGTTCCGGTAG+CGG | - | chr7_2:75887294-75887313 | Msa1077290:CDS | 50.0% |
| ! | CTATGGACTCGGTATGCAGA+AGG | - | chr7_2:75887619-75887638 | Msa1077290:intron | 50.0% |
| ! | GACTCGGTATGCAGAAGGAT+TGG | - | chr7_2:75887624-75887643 | Msa1077290:intron | 50.0% |
| AGGGATCAAAGAAGAACCGG+AGG | - | chr7_2:75888495-75888514 | Msa1077290:intron | 50.0% | |
| TGATACTGTCACGGTTGTCG+AGG | - | chr7_2:75888525-75888544 | Msa1077290:intron | 50.0% | |
| GATACTGTCACGGTTGTCGA+GGG | - | chr7_2:75888526-75888545 | Msa1077290:intron | 50.0% | |
| CGCGGTCTAGAAGTGAACTT+TGG | - | chr7_2:75888551-75888570 | Msa1077290:intron | 50.0% | |
| !! | GAGGGTGCAGTTGATGAGAA+TGG | - | chr7_2:75888631-75888650 | Msa1077290:intron | 50.0% |
| GGGTTAACACCAACTGCACT+AGG | + | chr7_2:75888706-75888725 | None:intergenic | 50.0% | |
| ! | TGGACAAGTTGAGAGGAGGC+TGG | - | chr7_2:75882973-75882992 | Msa1077290:three_prime_UTR | 55.0% |
| GTTGAGAGGAGGCTGGATTC+TGG | - | chr7_2:75882980-75882999 | Msa1077290:three_prime_UTR | 55.0% | |
| GAATCGTCGTTGCGTGAGAG+TGG | - | chr7_2:75883019-75883038 | Msa1077290:three_prime_UTR | 55.0% | |
| !! | ATTCCGAGAGCGTCTCTTGG+GGG | + | chr7_2:75883835-75883854 | None:intergenic | 55.0% |
| !! | GATTCCGAGAGCGTCTCTTG+GGG | + | chr7_2:75883836-75883855 | None:intergenic | 55.0% |
| !! | GTGATTCCGAGAGCGTCTCT+TGG | + | chr7_2:75883838-75883857 | None:intergenic | 55.0% |
| GGCTAAAGCTGTCAGATCCC+CGG | + | chr7_2:75884938-75884957 | None:intergenic | 55.0% | |
| TTGCAGAGCGCGTGAGAACT+TGG | - | chr7_2:75885140-75885159 | Msa1077290:intron | 55.0% | |
| CAGACACGGAGAACAGACAC+CGG | + | chr7_2:75886040-75886059 | None:intergenic | 55.0% | |
| TGCTATGCAGTCGGAGCTGT+AGG | - | chr7_2:75886126-75886145 | Msa1077290:intron | 55.0% | |
| GCTATGCAGTCGGAGCTGTA+GGG | - | chr7_2:75886127-75886146 | Msa1077290:intron | 55.0% | |
| ! | AACACAAGCACCGCCCTTAG+AGG | + | chr7_2:75886617-75886636 | None:intergenic | 55.0% |
| TCCTGGAGAGGCCTCTTCTT+CGG | + | chr7_2:75887156-75887175 | None:intergenic | 55.0% | |
| AAGAAGAGGCCTCTCCAGGA+AGG | - | chr7_2:75887156-75887175 | Msa1077290:CDS | 55.0% | |
| !! | ATTGTTGGTTCCGGTAGCGG+TGG | - | chr7_2:75887297-75887316 | Msa1077290:CDS | 55.0% |
| ! | TTAGCTGGCTCAACAGTCGG+TGG | - | chr7_2:75887486-75887505 | Msa1077290:intron | 55.0% |
| ! | CGGAAAGGGTGCGAGAGAAT+CGG | - | chr7_2:75887693-75887712 | Msa1077290:intron | 55.0% |
| AACGGCGCAGTTATCCTCAC+CGG | - | chr7_2:75887840-75887859 | Msa1077290:intron | 55.0% | |
| TCTCAGCTCTACATCCGGTG+AGG | + | chr7_2:75887857-75887876 | None:intergenic | 55.0% | |
| !! | GAAGCACCTGCTTTAGGACC+TGG | - | chr7_2:75888205-75888224 | Msa1077290:intron | 55.0% |
| AACCCCCCAAGAGACGCTCT+CGG | - | chr7_2:75883829-75883848 | Msa1077290:three_prime_UTR | 60.0% | |
| !! | TTCCGAGAGCGTCTCTTGGG+GGG | + | chr7_2:75883834-75883853 | None:intergenic | 60.0% |
| ACCGAAGAAGAGGCCTCTCC+AGG | - | chr7_2:75887152-75887171 | Msa1077290:CDS | 60.0% | |
| TGCAACTCCTCCACCGCTAC+CGG | + | chr7_2:75887310-75887329 | None:intergenic | 60.0% | |
| ! | GTTGGTTCCGGTAGCGGTGG+AGG | - | chr7_2:75887300-75887319 | Msa1077290:CDS | 65.0% |
| ! | GCTGGCTCAACAGTCGGTGG+AGG | - | chr7_2:75887489-75887508 | Msa1077290:intron | 65.0% |
| TCACGGTTGTCGAGGGACCG+CGG | - | chr7_2:75888533-75888552 | Msa1077290:intron | 65.0% | |
| GGTTGCGGCGGGAGCTGTTG+AGG | - | chr7_2:75888432-75888451 | Msa1077290:intron | 70.0% | |
| GCGGCGGGAGCTGTTGAGGT+TGG | - | chr7_2:75888436-75888455 | Msa1077290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 75882896 | 75888988 | 75882896 | ID=Msa1077290;Name=Msa1077290 |
| chr7_2 | mRNA | 75882896 | 75888988 | 75882896 | ID=Msa1077290-mRNA-1;Parent=Msa1077290;Name=Msa1077290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.25|0.4|1|1|1|5|966|818 |
| chr7_2 | exon | 75882896 | 75884803 | 75882896 | ID=Msa1077290-mRNA-1:exon:18156;Parent=Msa1077290-mRNA-1 |
| chr7_2 | exon | 75885211 | 75885488 | 75885211 | ID=Msa1077290-mRNA-1:exon:18155;Parent=Msa1077290-mRNA-1 |
| chr7_2 | exon | 75886566 | 75887387 | 75886566 | ID=Msa1077290-mRNA-1:exon:18154;Parent=Msa1077290-mRNA-1 |
| chr7_2 | exon | 75887933 | 75888185 | 75887933 | ID=Msa1077290-mRNA-1:exon:18153;Parent=Msa1077290-mRNA-1 |
| chr7_2 | exon | 75888827 | 75888988 | 75888827 | ID=Msa1077290-mRNA-1:exon:18152;Parent=Msa1077290-mRNA-1 |
| chr7_2 | CDS | 75888827 | 75888988 | 75888827 | ID=Msa1077290-mRNA-1:cds;Parent=Msa1077290-mRNA-1 |
| chr7_2 | CDS | 75887933 | 75888185 | 75887933 | ID=Msa1077290-mRNA-1:cds;Parent=Msa1077290-mRNA-1 |
| chr7_2 | CDS | 75886566 | 75887387 | 75886566 | ID=Msa1077290-mRNA-1:cds;Parent=Msa1077290-mRNA-1 |
| chr7_2 | CDS | 75885211 | 75885488 | 75885211 | ID=Msa1077290-mRNA-1:cds;Parent=Msa1077290-mRNA-1 |
| chr7_2 | CDS | 75883862 | 75884803 | 75883862 | ID=Msa1077290-mRNA-1:cds;Parent=Msa1077290-mRNA-1 |
| chr7_2 | three_prime_UTR | 75882896 | 75883861 | 75882896 | ID=Msa1077290-mRNA-1:three_prime_utr;Parent=Msa1077290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
