Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078260 | AES81712.2 | 94.789 | 403 | 12 | 1 | 1 | 403 | 1 | 394 | 0.0 | 750 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078260 | sp|Q9M353|CHX20_ARATH | 75.062 | 405 | 99 | 2 | 1 | 403 | 1 | 405 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078260 | G7KZM7 | 94.789 | 403 | 12 | 1 | 1 | 403 | 1 | 394 | 0.0 | 750 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1064940 | Msa1078260 | 0.808521 | 2.973210e-50 | -8.615850e-47 |
| Msa0964510 | Msa1078260 | 0.801094 | 1.058751e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078260 | MtrunA17_Chr7g0262901 | 88.337 | 403 | 47 | 0 | 1 | 403 | 1 | 403 | 0.0 | 645 |
| Msa1078260 | MtrunA17_Chr7g0262871 | 94.186 | 258 | 12 | 1 | 1 | 258 | 1 | 255 | 1.52e-168 | 472 |
| Msa1078260 | MtrunA17_Chr7g0262911 | 65.915 | 399 | 128 | 3 | 9 | 403 | 5 | 399 | 5.31e-167 | 488 |
| Msa1078260 | MtrunA17_Chr5g0397051 | 60.101 | 396 | 149 | 3 | 8 | 403 | 15 | 401 | 6.50e-160 | 469 |
| Msa1078260 | MtrunA17_Chr5g0397041 | 59.848 | 396 | 150 | 3 | 8 | 403 | 15 | 401 | 4.86e-159 | 467 |
| Msa1078260 | MtrunA17_Chr4g0039911 | 59.848 | 396 | 150 | 3 | 8 | 403 | 12 | 398 | 3.24e-146 | 435 |
| Msa1078260 | MtrunA17_Chr4g0069671 | 59.091 | 396 | 153 | 3 | 8 | 403 | 12 | 398 | 4.12e-145 | 432 |
| Msa1078260 | MtrunA17_Chr3g0130301 | 52.417 | 393 | 177 | 5 | 11 | 403 | 21 | 403 | 5.80e-132 | 399 |
| Msa1078260 | MtrunA17_Chr8g0384341 | 48.601 | 393 | 191 | 4 | 11 | 403 | 20 | 401 | 3.10e-125 | 381 |
| Msa1078260 | MtrunA17_Chr2g0280951 | 45.500 | 400 | 203 | 6 | 6 | 403 | 21 | 407 | 6.15e-110 | 341 |
| Msa1078260 | MtrunA17_Chr5g0397061 | 58.484 | 277 | 106 | 3 | 127 | 403 | 3 | 270 | 5.37e-98 | 306 |
| Msa1078260 | MtrunA17_Chr7g0262881 | 97.638 | 127 | 3 | 0 | 277 | 403 | 1 | 127 | 1.20e-81 | 248 |
| Msa1078260 | MtrunA17_Chr3g0106471 | 32.642 | 386 | 252 | 3 | 11 | 396 | 36 | 413 | 1.36e-58 | 204 |
| Msa1078260 | MtrunA17_Chr2g0299741 | 30.151 | 398 | 254 | 9 | 15 | 403 | 35 | 417 | 2.48e-53 | 189 |
| Msa1078260 | MtrunA17_Chr3g0114261 | 29.487 | 390 | 267 | 5 | 14 | 403 | 22 | 403 | 1.32e-51 | 184 |
| Msa1078260 | MtrunA17_Chr3g0114191 | 29.744 | 390 | 246 | 11 | 14 | 394 | 75 | 445 | 1.51e-50 | 182 |
| Msa1078260 | MtrunA17_Chr7g0253491 | 30.905 | 398 | 252 | 8 | 9 | 396 | 24 | 408 | 1.89e-50 | 176 |
| Msa1078260 | MtrunA17_Chr1g0167801 | 32.381 | 315 | 202 | 5 | 89 | 403 | 31 | 334 | 1.14e-49 | 179 |
| Msa1078260 | MtrunA17_Chr1g0168791 | 32.381 | 315 | 202 | 5 | 89 | 403 | 31 | 334 | 5.46e-49 | 177 |
| Msa1078260 | MtrunA17_Chr3g0114181 | 28.831 | 385 | 261 | 7 | 12 | 394 | 33 | 406 | 4.16e-48 | 175 |
| Msa1078260 | MtrunA17_Chr3g0106371 | 29.793 | 386 | 260 | 6 | 13 | 396 | 44 | 420 | 4.56e-48 | 175 |
| Msa1078260 | MtrunA17_Chr3g0091581 | 29.219 | 397 | 258 | 8 | 15 | 403 | 20 | 401 | 2.54e-46 | 170 |
| Msa1078260 | MtrunA17_Chr8g0350601 | 31.776 | 321 | 204 | 5 | 86 | 402 | 1 | 310 | 1.70e-43 | 161 |
| Msa1078260 | MtrunA17_Chr5g0428341 | 32.087 | 321 | 203 | 6 | 86 | 402 | 1 | 310 | 3.38e-43 | 160 |
| Msa1078260 | MtrunA17_Chr3g0091591 | 30.488 | 328 | 213 | 5 | 80 | 403 | 8 | 324 | 1.23e-41 | 156 |
| Msa1078260 | MtrunA17_Chr5g0432151 | 26.546 | 388 | 274 | 5 | 12 | 397 | 27 | 405 | 1.44e-40 | 153 |
| Msa1078260 | MtrunA17_Chr5g0432141 | 27.202 | 386 | 274 | 5 | 12 | 397 | 31 | 409 | 3.96e-39 | 149 |
| Msa1078260 | MtrunA17_Chr5g0441061 | 25.253 | 396 | 273 | 9 | 12 | 397 | 33 | 415 | 1.17e-38 | 147 |
| Msa1078260 | MtrunA17_Chr3g0131701 | 26.478 | 389 | 268 | 7 | 12 | 393 | 43 | 420 | 9.67e-38 | 145 |
| Msa1078260 | MtrunA17_Chr5g0441041 | 25.693 | 397 | 262 | 12 | 12 | 393 | 33 | 411 | 2.19e-35 | 138 |
| Msa1078260 | MtrunA17_Chr3g0106461 | 25.964 | 389 | 276 | 6 | 11 | 398 | 31 | 408 | 3.49e-34 | 131 |
| Msa1078260 | MtrunA17_Chr6g0455471 | 25.743 | 404 | 276 | 8 | 12 | 403 | 35 | 426 | 2.40e-33 | 132 |
| Msa1078260 | MtrunA17_Chr5g0441051 | 24.242 | 396 | 277 | 8 | 12 | 397 | 33 | 415 | 2.49e-33 | 132 |
| Msa1078260 | MtrunA17_Chr8g0378261 | 25.622 | 402 | 280 | 6 | 12 | 403 | 37 | 429 | 1.36e-32 | 130 |
| Msa1078260 | MtrunA17_Chr5g0441281 | 23.604 | 394 | 288 | 5 | 9 | 391 | 47 | 438 | 1.60e-28 | 118 |
| Msa1078260 | MtrunA17_Chr5g0432121 | 26.087 | 345 | 239 | 8 | 63 | 403 | 1 | 333 | 2.90e-28 | 117 |
| Msa1078260 | MtrunA17_Chr7g0234431 | 23.426 | 397 | 285 | 8 | 9 | 391 | 4 | 395 | 2.92e-28 | 117 |
| Msa1078260 | MtrunA17_Chr7g0234501 | 22.864 | 398 | 288 | 8 | 9 | 392 | 47 | 439 | 2.94e-28 | 116 |
| Msa1078260 | MtrunA17_Chr7g0234521 | 23.775 | 408 | 289 | 9 | 9 | 399 | 47 | 449 | 4.84e-28 | 116 |
| Msa1078260 | MtrunA17_Chr7g0234551 | 23.426 | 397 | 285 | 8 | 9 | 391 | 47 | 438 | 5.41e-28 | 116 |
| Msa1078260 | MtrunA17_Chr5g0441291 | 22.693 | 401 | 288 | 9 | 9 | 393 | 47 | 441 | 1.73e-26 | 112 |
| Msa1078260 | MtrunA17_Chr5g0432131 | 26.578 | 301 | 213 | 6 | 98 | 397 | 1 | 294 | 1.45e-25 | 108 |
| Msa1078260 | MtrunA17_Chr4g0013341 | 22.886 | 402 | 270 | 11 | 5 | 394 | 1 | 374 | 1.13e-24 | 106 |
| Msa1078260 | MtrunA17_Chr4g0019411 | 23.691 | 363 | 253 | 7 | 40 | 393 | 33 | 380 | 3.39e-24 | 103 |
| Msa1078260 | MtrunA17_Chr6g0470261 | 24.242 | 330 | 230 | 8 | 74 | 393 | 56 | 375 | 1.55e-23 | 103 |
| Msa1078260 | MtrunA17_Chr3g0140801 | 24.533 | 375 | 256 | 12 | 31 | 396 | 22 | 378 | 2.80e-23 | 102 |
| Msa1078260 | MtrunA17_Chr3g0121481 | 23.313 | 326 | 231 | 7 | 77 | 397 | 1 | 312 | 4.00e-23 | 101 |
| Msa1078260 | MtrunA17_Chr3g0089271 | 23.913 | 368 | 256 | 9 | 35 | 393 | 28 | 380 | 1.63e-19 | 90.9 |
| Msa1078260 | MtrunA17_Chr7g0234541 | 31.746 | 126 | 78 | 3 | 9 | 127 | 36 | 160 | 1.97e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078260 | AT3G53720.1 | 75.062 | 405 | 99 | 2 | 1 | 403 | 1 | 405 | 0.0 | 530 |
| Msa1078260 | AT4G23700.2 | 59.343 | 396 | 150 | 4 | 8 | 402 | 12 | 397 | 1.53e-150 | 446 |
| Msa1078260 | AT4G23700.1 | 59.343 | 396 | 150 | 4 | 8 | 402 | 12 | 397 | 1.53e-150 | 446 |
| Msa1078260 | AT5G41610.1 | 58.333 | 396 | 156 | 3 | 8 | 403 | 13 | 399 | 1.57e-144 | 431 |
| Msa1078260 | AT5G41610.3 | 58.333 | 396 | 156 | 3 | 8 | 403 | 13 | 399 | 1.57e-144 | 431 |
| Msa1078260 | AT3G17630.1 | 59.698 | 397 | 149 | 4 | 8 | 403 | 14 | 400 | 7.92e-144 | 428 |
| Msa1078260 | AT3G17630.2 | 59.698 | 397 | 149 | 4 | 8 | 403 | 14 | 400 | 7.92e-144 | 428 |
| Msa1078260 | AT1G64170.1 | 57.214 | 402 | 164 | 3 | 2 | 403 | 15 | 408 | 2.32e-142 | 425 |
| Msa1078260 | AT3G53720.2 | 73.636 | 330 | 85 | 2 | 76 | 403 | 3 | 332 | 1.02e-134 | 404 |
| Msa1078260 | AT2G13620.1 | 53.690 | 393 | 171 | 5 | 11 | 403 | 22 | 403 | 3.03e-120 | 368 |
| Msa1078260 | AT5G41610.2 | 58.235 | 340 | 133 | 3 | 64 | 403 | 1 | 331 | 5.90e-115 | 352 |
| Msa1078260 | AT2G31910.1 | 33.419 | 389 | 245 | 5 | 17 | 403 | 28 | 404 | 1.13e-56 | 199 |
| Msa1078260 | AT1G05580.1 | 33.760 | 391 | 243 | 8 | 16 | 403 | 41 | 418 | 5.78e-56 | 197 |
| Msa1078260 | AT5G37060.1 | 28.497 | 386 | 263 | 6 | 14 | 395 | 53 | 429 | 1.01e-45 | 169 |
| Msa1078260 | AT5G58460.1 | 29.049 | 389 | 258 | 7 | 14 | 395 | 53 | 430 | 1.18e-45 | 168 |
| Msa1078260 | AT1G05580.2 | 34.385 | 317 | 194 | 6 | 89 | 403 | 3 | 307 | 4.18e-43 | 160 |
| Msa1078260 | AT2G31910.3 | 33.754 | 317 | 196 | 5 | 89 | 403 | 3 | 307 | 1.14e-42 | 159 |
| Msa1078260 | AT2G31910.2 | 33.754 | 317 | 196 | 5 | 89 | 403 | 3 | 307 | 1.14e-42 | 159 |
| Msa1078260 | AT1G06970.1 | 26.972 | 393 | 276 | 6 | 11 | 403 | 35 | 416 | 6.48e-41 | 154 |
| Msa1078260 | AT5G01690.1 | 27.532 | 385 | 267 | 4 | 12 | 393 | 25 | 400 | 2.13e-36 | 141 |
| Msa1078260 | AT2G30240.1 | 25.879 | 398 | 277 | 7 | 11 | 403 | 37 | 421 | 1.08e-33 | 134 |
| Msa1078260 | AT3G44900.1 | 25.587 | 426 | 270 | 10 | 1 | 393 | 20 | 431 | 9.29e-26 | 110 |
| Msa1078260 | AT5G22900.1 | 23.239 | 426 | 280 | 8 | 1 | 393 | 21 | 432 | 2.08e-25 | 109 |
| Msa1078260 | AT5G01680.1 | 23.590 | 390 | 286 | 6 | 10 | 396 | 21 | 401 | 2.03e-24 | 106 |
| Msa1078260 | AT5G22910.1 | 25.758 | 396 | 261 | 14 | 24 | 403 | 47 | 425 | 1.06e-23 | 103 |
| Msa1078260 | AT1G79400.1 | 27.481 | 393 | 257 | 10 | 17 | 403 | 11 | 381 | 3.75e-23 | 102 |
| Msa1078260 | AT2G28180.1 | 25.248 | 404 | 269 | 9 | 9 | 393 | 39 | 428 | 2.21e-22 | 100 |
| Msa1078260 | AT1G08140.1 | 25.060 | 415 | 272 | 14 | 11 | 403 | 36 | 433 | 1.63e-21 | 97.4 |
| Msa1078260 | AT1G08150.1 | 25.355 | 422 | 269 | 16 | 8 | 403 | 40 | 441 | 5.56e-20 | 92.8 |
| Msa1078260 | AT2G28170.1 | 25.915 | 355 | 230 | 12 | 53 | 393 | 86 | 421 | 2.83e-18 | 87.4 |
| Msa1078260 | AT1G16380.1 | 22.250 | 400 | 255 | 13 | 17 | 397 | 11 | 373 | 4.51e-16 | 80.9 |
| Msa1078260 | AT3G52080.1 | 23.481 | 362 | 255 | 7 | 36 | 389 | 33 | 380 | 1.30e-14 | 76.3 |
| Msa1078260 | AT1G08135.1 | 23.846 | 390 | 257 | 10 | 23 | 393 | 57 | 425 | 1.14e-11 | 67.0 |
| Msa1078260 | AT3G44930.1 | 21.928 | 415 | 279 | 14 | 5 | 395 | 12 | 405 | 3.42e-11 | 65.5 |
| Msa1078260 | AT3G44910.1 | 20.603 | 398 | 290 | 10 | 11 | 393 | 18 | 404 | 5.42e-11 | 65.1 |
Find 94 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCGGGTGTAATGGTTTC+AGG | 0.207166 | 7_2:-77143873 | Msa1078260:CDS |
| GCTTGTGCTGGGAAGATTAT+AGG | 0.233250 | 7_2:-77143624 | Msa1078260:CDS |
| CTATTCTTCCTCTTCCTTGT+TGG | 0.276391 | 7_2:-77144398 | Msa1078260:CDS |
| AGAAATATAAACTTCGTTTA+CGG | 0.306223 | 7_2:+77143902 | None:intergenic |
| ATAACTGCATTCCCCGTCTT+AGG | 0.306361 | 7_2:-77144191 | Msa1078260:CDS |
| CAACATTGGAAAAGAGAAAA+AGG | 0.316095 | 7_2:-77143502 | None:intergenic |
| GGATTCATAACTGATTTCAT+AGG | 0.331087 | 7_2:-77143852 | Msa1078260:CDS |
| CTAAGGTGGTTTGAATAATA+AGG | 0.334246 | 7_2:+77144955 | None:intergenic |
| AAGCCCACTTGTTGCCGTTT+GGG | 0.345730 | 7_2:-77144021 | Msa1078260:CDS |
| TTGATTGAGGTTATGTTTAC+CGG | 0.350294 | 7_2:+77145035 | None:intergenic |
| ACGATCTCGGCTATGACTTT+AGG | 0.351430 | 7_2:+77144882 | None:intergenic |
| GTGATTTCAGTTGCTTGTGC+TGG | 0.354478 | 7_2:-77143636 | Msa1078260:CDS |
| CTTCCTTTCGTCTCCGGCAT+TGG | 0.363650 | 7_2:-77144302 | Msa1078260:CDS |
| AAACTTCCTCCGATGGAATC+TGG | 0.372486 | 7_2:-77145013 | Msa1078260:CDS |
| ATCTCACTTCCTTTCGTCTC+CGG | 0.381523 | 7_2:-77144308 | Msa1078260:CDS |
| GCCGTTTGGGTACTTCTCTC+TGG | 0.388063 | 7_2:-77144008 | Msa1078260:CDS |
| AAAGCCCACTTGTTGCCGTT+TGG | 0.396855 | 7_2:-77144022 | Msa1078260:CDS |
| ATCGAGGGAATATACGTTGC+AGG | 0.401246 | 7_2:+77144462 | None:intergenic |
| TTGTTTCTTCCTAGAGCTGA+TGG | 0.404361 | 7_2:+77144491 | None:intergenic |
| GATTAGTGGTGGAAAAGCTT+GGG | 0.426834 | 7_2:-77143673 | Msa1078260:CDS |
| CTTGTGCTGGGAAGATTATA+GGG | 0.427649 | 7_2:-77143623 | Msa1078260:CDS |
| GAGGTTTGAAGAGGAAAGCT+AGG | 0.439591 | 7_2:+77144913 | None:intergenic |
| AACTAGGAATGTGCTGAATC+CGG | 0.440353 | 7_2:+77144235 | None:intergenic |
| GGCTTTGTCTGCTCCGTCGA+TGG | 0.442484 | 7_2:+77144256 | None:intergenic |
| AATGAGTTCAACGAGTCCTT+TGG | 0.451221 | 7_2:+77143530 | None:intergenic |
| AGATTAGTGGTGGAAAAGCT+TGG | 0.461197 | 7_2:-77143674 | Msa1078260:CDS |
| AGTGTAATTGATTCTCTAGC+TGG | 0.473668 | 7_2:+77143570 | None:intergenic |
| CGGCTATGACTTTAGGTTGA+CGG | 0.475995 | 7_2:+77144889 | None:intergenic |
| GCTAGGATTCGTCCTAAGAC+GGG | 0.484197 | 7_2:+77144179 | None:intergenic |
| AACAACGGCGACGCCAATGC+CGG | 0.487532 | 7_2:+77144289 | None:intergenic |
| TATATTTCTTTAACCCTAGC+GGG | 0.489080 | 7_2:-77143888 | Msa1078260:CDS |
| GTGCAACTCCCATGAAAACT+AGG | 0.489431 | 7_2:+77144219 | None:intergenic |
| TGAGGTTATGTTTACCGGCA+TGG | 0.492127 | 7_2:+77145040 | None:intergenic |
| CTAAACTCAATTCGCCGTAC+CGG | 0.499475 | 7_2:-77144362 | Msa1078260:CDS |
| TTTAACCCTAGCGGGTGTAA+TGG | 0.499847 | 7_2:-77143880 | Msa1078260:CDS |
| GAAGTTGATAGAGAGAATTG+AGG | 0.504020 | 7_2:-77143763 | Msa1078260:CDS |
| GATTCATAACTGATTTCATA+GGG | 0.509984 | 7_2:-77143851 | Msa1078260:CDS |
| CTTGCGACGGATTCCAGCGT+TGG | 0.513135 | 7_2:+77144431 | None:intergenic |
| TCGATGGAGCATGCCAACGC+TGG | 0.517824 | 7_2:-77144444 | Msa1078260:CDS |
| TGATTTCAGTTGCTTGTGCT+GGG | 0.518686 | 7_2:-77143635 | Msa1078260:CDS |
| ACGCCAATGCCGGAGACGAA+AGG | 0.526249 | 7_2:+77144299 | None:intergenic |
| TGAGCCACACGCTTCATCAC+GGG | 0.530020 | 7_2:+77143948 | None:intergenic |
| GCTTTAGCAATCGCATTAGC+CGG | 0.534495 | 7_2:-77144071 | Msa1078260:CDS |
| CCACTCGAAGCAAAATAAAG+TGG | 0.538717 | 7_2:+77143717 | None:intergenic |
| GAACTCATTGTACTCAACAT+TGG | 0.538927 | 7_2:-77143516 | Msa1078260:CDS |
| AGCTAGGATTCGTCCTAAGA+CGG | 0.541093 | 7_2:+77144178 | None:intergenic |
| GTTGACGGAGAGGTTTGAAG+AGG | 0.543029 | 7_2:+77144904 | None:intergenic |
| CTGGAATCCGTCGCAAGCAT+AGG | 0.546538 | 7_2:-77144425 | Msa1078260:CDS |
| ACTCGAGTCCAACAAGGAAG+AGG | 0.557469 | 7_2:+77144390 | None:intergenic |
| ACTGATGTGACTAAGATTAG+TGG | 0.558539 | 7_2:-77143687 | Msa1078260:CDS |
| TGAGAAGTTTGAGTTCAGCT+AGG | 0.563629 | 7_2:+77144162 | None:intergenic |
| TCAATCAAAACTTCCTCCGA+TGG | 0.565083 | 7_2:-77145020 | Msa1078260:CDS |
| GCCAGAGAGAAGTACCCAAA+CGG | 0.571284 | 7_2:+77144007 | None:intergenic |
| GAGAGGGAAAGCGAAATCGA+GGG | 0.571723 | 7_2:+77144977 | None:intergenic |
| TAGGGTACATACGACGATCT+CGG | 0.573663 | 7_2:+77144869 | None:intergenic |
| TTGTTGTTGCTATGATGTGG+AGG | 0.576861 | 7_2:-77143596 | Msa1078260:CDS |
| ATCGCCTTGCCAGATTCCAT+CGG | 0.577893 | 7_2:+77145004 | None:intergenic |
| TCCTCCGATGGAATCTGGCA+AGG | 0.579692 | 7_2:-77145008 | Msa1078260:CDS |
| GCATTCAGTATAGCAGCTTG+TGG | 0.585968 | 7_2:-77144332 | Msa1078260:CDS |
| GGAGAGGGAAAGCGAAATCG+AGG | 0.594367 | 7_2:+77144976 | None:intergenic |
| TTGAGCCACACGCTTCATCA+CGG | 0.597494 | 7_2:+77143947 | None:intergenic |
| AGGTTTGAAGAGGAAAGCTA+GGG | 0.598859 | 7_2:+77144914 | None:intergenic |
| GCTAGAGAATCAATTACACT+TGG | 0.599662 | 7_2:-77143567 | Msa1078260:CDS |
| TGAAACCATTACACCCGCTA+GGG | 0.600504 | 7_2:+77143875 | None:intergenic |
| TGAAGAGGAAAGCTAGGGAG+CGG | 0.602562 | 7_2:+77144919 | None:intergenic |
| CTGAAACCATTACACCCGCT+AGG | 0.604315 | 7_2:+77143874 | None:intergenic |
| ATCGACGGAGCAGACAAAGC+CGG | 0.604740 | 7_2:-77144254 | Msa1078260:CDS |
| GCGGCTAACGACGAGCACTA+AGG | 0.609272 | 7_2:+77144938 | None:intergenic |
| AGTACCCAAACGGCAACAAG+TGG | 0.610548 | 7_2:+77144017 | None:intergenic |
| ATTAGTGGTGGAAAAGCTTG+GGG | 0.615927 | 7_2:-77143672 | Msa1078260:CDS |
| ACGCGTAGGCGAAACTGCAA+TGG | 0.624208 | 7_2:-77144135 | Msa1078260:CDS |
| GCGTTGGCATGCTCCATCGA+GGG | 0.627466 | 7_2:+77144447 | None:intergenic |
| GTGGTTTGAATAATAAGGAG+AGG | 0.627799 | 7_2:+77144960 | None:intergenic |
| TAGAAGACCTATGCTTGCGA+CGG | 0.631114 | 7_2:+77144418 | None:intergenic |
| TTATATTTCTTTAACCCTAG+CGG | 0.632281 | 7_2:-77143889 | Msa1078260:CDS |
| TGGTTTGAATAATAAGGAGA+GGG | 0.632831 | 7_2:+77144961 | None:intergenic |
| ATGACTTTAGGTTGACGGAG+AGG | 0.639950 | 7_2:+77144894 | None:intergenic |
| CTAGGATTCGTCCTAAGACG+GGG | 0.643214 | 7_2:+77144180 | None:intergenic |
| TGCAACGTATATTCCCTCGA+TGG | 0.643484 | 7_2:-77144460 | Msa1078260:CDS |
| AAACTTCTCACAACACGCGT+AGG | 0.645236 | 7_2:-77144149 | Msa1078260:CDS |
| GCTAACGACGAGCACTAAGG+TGG | 0.648906 | 7_2:+77144941 | None:intergenic |
| GCCTTGCCAGATTCCATCGG+AGG | 0.649802 | 7_2:+77145007 | None:intergenic |
| GGAGTACTCATGAACACCAA+AGG | 0.657099 | 7_2:-77143546 | Msa1078260:CDS |
| GATCTAACTCGAGTCCAACA+AGG | 0.661413 | 7_2:+77144384 | None:intergenic |
| AGAGGGAAAGCGAAATCGAG+GGG | 0.664977 | 7_2:+77144978 | None:intergenic |
| GATGTGACTAAGATTAGTGG+TGG | 0.677453 | 7_2:-77143684 | Msa1078260:CDS |
| AGCGTTGGCATGCTCCATCG+AGG | 0.678814 | 7_2:+77144446 | None:intergenic |
| TGTGGCTCAAAGATGCTCAG+TGG | 0.694001 | 7_2:-77143934 | Msa1078260:CDS |
| AAGTCCCGTGATGAAGCGTG+TGG | 0.695219 | 7_2:-77143952 | Msa1078260:CDS |
| GTACCCAAACGGCAACAAGT+GGG | 0.697675 | 7_2:+77144018 | None:intergenic |
| GCCGGAAAAGAATCCGACGA+CGG | 0.703206 | 7_2:-77144053 | Msa1078260:CDS |
| TTAGTGGTGGAAAAGCTTGG+GGG | 0.711879 | 7_2:-77143671 | Msa1078260:CDS |
| CATTCGACGACTTAACCGCG+TGG | 0.724943 | 7_2:-77144103 | Msa1078260:CDS |
| TAAAGCGAGAAGAATCCACG+CGG | 0.866386 | 7_2:+77144088 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATCTAAAAATAGA+GGG | + | chr7_2:77143840-77143859 | None:intergenic | 10.0% |
| !! | TATAAATAATCTAAAAATAG+AGG | + | chr7_2:77143841-77143860 | None:intergenic | 10.0% |
| !! | ATAAATAATCTAAAAATAGA+GGG | + | chr7_2:77143840-77143859 | None:intergenic | 10.0% |
| !! | TATAAATAATCTAAAAATAG+AGG | + | chr7_2:77143841-77143860 | None:intergenic | 10.0% |
| !!! | TTAGAAAAATTACCATTTTT+TGG | + | chr7_2:77144758-77144777 | None:intergenic | 15.0% |
| !!! | TTAGAAAAATTACCATTTTT+TGG | + | chr7_2:77144758-77144777 | None:intergenic | 15.0% |
| !! | CCAAGCATAATTAATTTAAA+TGG | + | chr7_2:77143708-77143727 | None:intergenic | 20.0% |
| !! | CCATTTAAATTAATTATGCT+TGG | - | chr7_2:77143705-77143724 | Msa1078260:CDS | 20.0% |
| !!! | GGGTTTTATAGTTATATTAA+GGG | + | chr7_2:77143779-77143798 | None:intergenic | 20.0% |
| !!! | AGGGTTTTATAGTTATATTA+AGG | + | chr7_2:77143780-77143799 | None:intergenic | 20.0% |
| !!! | TTAATACCGTGATTTTATTA+TGG | - | chr7_2:77143968-77143987 | Msa1078260:CDS | 20.0% |
| !!! | TAATACCGTGATTTTATTAT+GGG | - | chr7_2:77143969-77143988 | Msa1078260:CDS | 20.0% |
| !! | AGAAATATAAACTTCGTTTA+CGG | + | chr7_2:77144642-77144661 | None:intergenic | 20.0% |
| !! | CCAAGCATAATTAATTTAAA+TGG | + | chr7_2:77143708-77143727 | None:intergenic | 20.0% |
| !! | CCATTTAAATTAATTATGCT+TGG | - | chr7_2:77143705-77143724 | Msa1078260:CDS | 20.0% |
| !!! | GGGTTTTATAGTTATATTAA+GGG | + | chr7_2:77143779-77143798 | None:intergenic | 20.0% |
| !!! | AGGGTTTTATAGTTATATTA+AGG | + | chr7_2:77143780-77143799 | None:intergenic | 20.0% |
| !!! | TTAATACCGTGATTTTATTA+TGG | - | chr7_2:77143968-77143987 | Msa1078260:CDS | 20.0% |
| !!! | TAATACCGTGATTTTATTAT+GGG | - | chr7_2:77143969-77143988 | Msa1078260:CDS | 20.0% |
| !! | AGAAATATAAACTTCGTTTA+CGG | + | chr7_2:77144642-77144661 | None:intergenic | 20.0% |
| !!! | ATTTTTAATTCATACTCCCA+CGG | - | chr7_2:77143734-77143753 | Msa1078260:CDS | 25.0% |
| ! | ATAGTTATATTAAGGGACAA+GGG | + | chr7_2:77143772-77143791 | None:intergenic | 25.0% |
| ! | TATAGTTATATTAAGGGACA+AGG | + | chr7_2:77143773-77143792 | None:intergenic | 25.0% |
| ! | TTATATTTCTTTAACCCTAG+CGG | - | chr7_2:77144652-77144671 | Msa1078260:intron | 25.0% |
| !! | GATTCATAACTGATTTCATA+GGG | - | chr7_2:77144690-77144709 | Msa1078260:intron | 25.0% |
| !! | AGAATTGAGGATTTTGTAAT+GGG | - | chr7_2:77144791-77144810 | Msa1078260:intron | 25.0% |
| !!! | ATTTTTAATTCATACTCCCA+CGG | - | chr7_2:77143734-77143753 | Msa1078260:CDS | 25.0% |
| ! | ATAGTTATATTAAGGGACAA+GGG | + | chr7_2:77143772-77143791 | None:intergenic | 25.0% |
| ! | TATAGTTATATTAAGGGACA+AGG | + | chr7_2:77143773-77143792 | None:intergenic | 25.0% |
| ! | TTATATTTCTTTAACCCTAG+CGG | - | chr7_2:77144652-77144671 | Msa1078260:intron | 25.0% |
| !! | GATTCATAACTGATTTCATA+GGG | - | chr7_2:77144690-77144709 | Msa1078260:intron | 25.0% |
| !! | AGAATTGAGGATTTTGTAAT+GGG | - | chr7_2:77144791-77144810 | Msa1078260:intron | 25.0% |
| TTGATTGAGGTTATGTTTAC+CGG | + | chr7_2:77143509-77143528 | None:intergenic | 30.0% | |
| TGGTTTGAATAATAAGGAGA+GGG | + | chr7_2:77143583-77143602 | None:intergenic | 30.0% | |
| CTAAGGTGGTTTGAATAATA+AGG | + | chr7_2:77143589-77143608 | None:intergenic | 30.0% | |
| TTAAATGGATGCAGATGATA+GGG | + | chr7_2:77143693-77143712 | None:intergenic | 30.0% | |
| TTTAAATGGATGCAGATGAT+AGG | + | chr7_2:77143694-77143713 | None:intergenic | 30.0% | |
| TAGTTATATTAAGGGACAAG+GGG | + | chr7_2:77143771-77143790 | None:intergenic | 30.0% | |
| TAACTGCAAGAAATTTCGTA+GGG | + | chr7_2:77143799-77143818 | None:intergenic | 30.0% | |
| ATAACTGCAAGAAATTTCGT+AGG | + | chr7_2:77143800-77143819 | None:intergenic | 30.0% | |
| TTTCTGAATTGCATGTATGT+AGG | - | chr7_2:77144010-77144029 | Msa1078260:CDS | 30.0% | |
| TTCTGAATTGCATGTATGTA+GGG | - | chr7_2:77144011-77144030 | Msa1078260:CDS | 30.0% | |
| ! | TATACTGAATGCTCTTTTAC+CGG | + | chr7_2:77144201-77144220 | None:intergenic | 30.0% |
| TATATTTCTTTAACCCTAGC+GGG | - | chr7_2:77144653-77144672 | Msa1078260:intron | 30.0% | |
| ! | GGATTCATAACTGATTTCAT+AGG | - | chr7_2:77144689-77144708 | Msa1078260:intron | 30.0% |
| GGATTGACAATTCCAAAAAA+TGG | - | chr7_2:77144743-77144762 | Msa1078260:intron | 30.0% | |
| ! | GAGAATTGAGGATTTTGTAA+TGG | - | chr7_2:77144790-77144809 | Msa1078260:intron | 30.0% |
| !!! | TTTTTGTTGTTGCTATGATG+TGG | - | chr7_2:77144942-77144961 | Msa1078260:CDS | 30.0% |
| TTGATTGAGGTTATGTTTAC+CGG | + | chr7_2:77143509-77143528 | None:intergenic | 30.0% | |
| TGGTTTGAATAATAAGGAGA+GGG | + | chr7_2:77143583-77143602 | None:intergenic | 30.0% | |
| CTAAGGTGGTTTGAATAATA+AGG | + | chr7_2:77143589-77143608 | None:intergenic | 30.0% | |
| TTAAATGGATGCAGATGATA+GGG | + | chr7_2:77143693-77143712 | None:intergenic | 30.0% | |
| TTTAAATGGATGCAGATGAT+AGG | + | chr7_2:77143694-77143713 | None:intergenic | 30.0% | |
| TAGTTATATTAAGGGACAAG+GGG | + | chr7_2:77143771-77143790 | None:intergenic | 30.0% | |
| TAACTGCAAGAAATTTCGTA+GGG | + | chr7_2:77143799-77143818 | None:intergenic | 30.0% | |
| ATAACTGCAAGAAATTTCGT+AGG | + | chr7_2:77143800-77143819 | None:intergenic | 30.0% | |
| TTTCTGAATTGCATGTATGT+AGG | - | chr7_2:77144010-77144029 | Msa1078260:CDS | 30.0% | |
| TTCTGAATTGCATGTATGTA+GGG | - | chr7_2:77144011-77144030 | Msa1078260:CDS | 30.0% | |
| ! | TATACTGAATGCTCTTTTAC+CGG | + | chr7_2:77144201-77144220 | None:intergenic | 30.0% |
| TATATTTCTTTAACCCTAGC+GGG | - | chr7_2:77144653-77144672 | Msa1078260:intron | 30.0% | |
| ! | GGATTCATAACTGATTTCAT+AGG | - | chr7_2:77144689-77144708 | Msa1078260:intron | 30.0% |
| GGATTGACAATTCCAAAAAA+TGG | - | chr7_2:77144743-77144762 | Msa1078260:intron | 30.0% | |
| ! | GAGAATTGAGGATTTTGTAA+TGG | - | chr7_2:77144790-77144809 | Msa1078260:intron | 30.0% |
| !!! | TTTTTGTTGTTGCTATGATG+TGG | - | chr7_2:77144942-77144961 | Msa1078260:CDS | 30.0% |
| GTGGTTTGAATAATAAGGAG+AGG | + | chr7_2:77143584-77143603 | None:intergenic | 35.0% | |
| ! | TACCGTGATTTTATTATGGG+TGG | - | chr7_2:77143972-77143991 | Msa1078260:CDS | 35.0% |
| CTCCACCCATAATAAAATCA+CGG | + | chr7_2:77143977-77143996 | None:intergenic | 35.0% | |
| ! | ATGTAGGGTGGAATTCTTTT+AGG | - | chr7_2:77144026-77144045 | Msa1078260:CDS | 35.0% |
| !! | AGCACATTCCTAGTTTTCAT+GGG | - | chr7_2:77144314-77144333 | Msa1078260:CDS | 35.0% |
| ! | ATAGGGATTCATGCGATTTT+CGG | - | chr7_2:77144707-77144726 | Msa1078260:intron | 35.0% |
| !! | GAAGTTGATAGAGAGAATTG+AGG | - | chr7_2:77144778-77144797 | Msa1078260:intron | 35.0% |
| !!! | CACTTTATTTTGCTTCGAGT+GGG | - | chr7_2:77144825-77144844 | Msa1078260:intron | 35.0% |
| ACTGATGTGACTAAGATTAG+TGG | - | chr7_2:77144854-77144873 | Msa1078260:intron | 35.0% | |
| ! | AGTGTAATTGATTCTCTAGC+TGG | + | chr7_2:77144974-77144993 | None:intergenic | 35.0% |
| GCTAGAGAATCAATTACACT+TGG | - | chr7_2:77144974-77144993 | Msa1078260:CDS | 35.0% | |
| GAACTCATTGTACTCAACAT+TGG | - | chr7_2:77145025-77145044 | Msa1078260:CDS | 35.0% | |
| GTGGTTTGAATAATAAGGAG+AGG | + | chr7_2:77143584-77143603 | None:intergenic | 35.0% | |
| ! | TACCGTGATTTTATTATGGG+TGG | - | chr7_2:77143972-77143991 | Msa1078260:CDS | 35.0% |
| CTCCACCCATAATAAAATCA+CGG | + | chr7_2:77143977-77143996 | None:intergenic | 35.0% | |
| ! | ATGTAGGGTGGAATTCTTTT+AGG | - | chr7_2:77144026-77144045 | Msa1078260:CDS | 35.0% |
| !! | AGCACATTCCTAGTTTTCAT+GGG | - | chr7_2:77144314-77144333 | Msa1078260:CDS | 35.0% |
| ! | ATAGGGATTCATGCGATTTT+CGG | - | chr7_2:77144707-77144726 | Msa1078260:intron | 35.0% |
| !! | GAAGTTGATAGAGAGAATTG+AGG | - | chr7_2:77144778-77144797 | Msa1078260:intron | 35.0% |
| !!! | CACTTTATTTTGCTTCGAGT+GGG | - | chr7_2:77144825-77144844 | Msa1078260:intron | 35.0% |
| ACTGATGTGACTAAGATTAG+TGG | - | chr7_2:77144854-77144873 | Msa1078260:intron | 35.0% | |
| ! | AGTGTAATTGATTCTCTAGC+TGG | + | chr7_2:77144974-77144993 | None:intergenic | 35.0% |
| GCTAGAGAATCAATTACACT+TGG | - | chr7_2:77144974-77144993 | Msa1078260:CDS | 35.0% | |
| GAACTCATTGTACTCAACAT+TGG | - | chr7_2:77145025-77145044 | Msa1078260:CDS | 35.0% | |
| !!! | ATCGGAGGAAGTTTTGATTG+AGG | + | chr7_2:77143522-77143541 | None:intergenic | 40.0% |
| TCAATCAAAACTTCCTCCGA+TGG | - | chr7_2:77143521-77143540 | Msa1078260:CDS | 40.0% | |
| AGGTTTGAAGAGGAAAGCTA+GGG | + | chr7_2:77143630-77143649 | None:intergenic | 40.0% | |
| TGAATTGCATGTATGTAGGG+TGG | - | chr7_2:77144014-77144033 | Msa1078260:CDS | 40.0% | |
| ! | TTGTTTCTTCCTAGAGCTGA+TGG | + | chr7_2:77144053-77144072 | None:intergenic | 40.0% |
| CTATTCTTCCTCTTCCTTGT+TGG | - | chr7_2:77144143-77144162 | Msa1078260:CDS | 40.0% | |
| ! | TGAATGCTCTTTTACCGGTA+CGG | + | chr7_2:77144196-77144215 | None:intergenic | 40.0% |
| !! | GATGGTTTTGCGGAAAACAA+CGG | + | chr7_2:77144270-77144289 | None:intergenic | 40.0% |
| AACTAGGAATGTGCTGAATC+CGG | + | chr7_2:77144309-77144328 | None:intergenic | 40.0% | |
| !! | CAGCACATTCCTAGTTTTCA+TGG | - | chr7_2:77144313-77144332 | Msa1078260:CDS | 40.0% |
| ! | TGAGAAGTTTGAGTTCAGCT+AGG | + | chr7_2:77144382-77144401 | None:intergenic | 40.0% |
| !! | ATTTTCGGCGCGTTTGTTTT+CGG | - | chr7_2:77144722-77144741 | Msa1078260:intron | 40.0% |
| CCACTCGAAGCAAAATAAAG+TGG | + | chr7_2:77144827-77144846 | None:intergenic | 40.0% | |
| !!! | CCACTTTATTTTGCTTCGAG+TGG | - | chr7_2:77144824-77144843 | Msa1078260:intron | 40.0% |
| GATGTGACTAAGATTAGTGG+TGG | - | chr7_2:77144857-77144876 | Msa1078260:intron | 40.0% | |
| ! | AGATTAGTGGTGGAAAAGCT+TGG | - | chr7_2:77144867-77144886 | Msa1078260:intron | 40.0% |
| ! | GATTAGTGGTGGAAAAGCTT+GGG | - | chr7_2:77144868-77144887 | Msa1078260:intron | 40.0% |
| ! | ATTAGTGGTGGAAAAGCTTG+GGG | - | chr7_2:77144869-77144888 | Msa1078260:intron | 40.0% |
| TGATTTCAGTTGCTTGTGCT+GGG | - | chr7_2:77144906-77144925 | Msa1078260:CDS | 40.0% | |
| CTTGTGCTGGGAAGATTATA+GGG | - | chr7_2:77144918-77144937 | Msa1078260:CDS | 40.0% | |
| ! | TTGTTGTTGCTATGATGTGG+AGG | - | chr7_2:77144945-77144964 | Msa1078260:CDS | 40.0% |
| AATGAGTTCAACGAGTCCTT+TGG | + | chr7_2:77145014-77145033 | None:intergenic | 40.0% | |
| !!! | ATCGGAGGAAGTTTTGATTG+AGG | + | chr7_2:77143522-77143541 | None:intergenic | 40.0% |
| TCAATCAAAACTTCCTCCGA+TGG | - | chr7_2:77143521-77143540 | Msa1078260:CDS | 40.0% | |
| AGGTTTGAAGAGGAAAGCTA+GGG | + | chr7_2:77143630-77143649 | None:intergenic | 40.0% | |
| TGAATTGCATGTATGTAGGG+TGG | - | chr7_2:77144014-77144033 | Msa1078260:CDS | 40.0% | |
| ! | TTGTTTCTTCCTAGAGCTGA+TGG | + | chr7_2:77144053-77144072 | None:intergenic | 40.0% |
| CTATTCTTCCTCTTCCTTGT+TGG | - | chr7_2:77144143-77144162 | Msa1078260:CDS | 40.0% | |
| ! | TGAATGCTCTTTTACCGGTA+CGG | + | chr7_2:77144196-77144215 | None:intergenic | 40.0% |
| !! | GATGGTTTTGCGGAAAACAA+CGG | + | chr7_2:77144270-77144289 | None:intergenic | 40.0% |
| AACTAGGAATGTGCTGAATC+CGG | + | chr7_2:77144309-77144328 | None:intergenic | 40.0% | |
| !! | CAGCACATTCCTAGTTTTCA+TGG | - | chr7_2:77144313-77144332 | Msa1078260:CDS | 40.0% |
| ! | TGAGAAGTTTGAGTTCAGCT+AGG | + | chr7_2:77144382-77144401 | None:intergenic | 40.0% |
| !! | ATTTTCGGCGCGTTTGTTTT+CGG | - | chr7_2:77144722-77144741 | Msa1078260:intron | 40.0% |
| CCACTCGAAGCAAAATAAAG+TGG | + | chr7_2:77144827-77144846 | None:intergenic | 40.0% | |
| !!! | CCACTTTATTTTGCTTCGAG+TGG | - | chr7_2:77144824-77144843 | Msa1078260:intron | 40.0% |
| GATGTGACTAAGATTAGTGG+TGG | - | chr7_2:77144857-77144876 | Msa1078260:intron | 40.0% | |
| ! | AGATTAGTGGTGGAAAAGCT+TGG | - | chr7_2:77144867-77144886 | Msa1078260:intron | 40.0% |
| ! | GATTAGTGGTGGAAAAGCTT+GGG | - | chr7_2:77144868-77144887 | Msa1078260:intron | 40.0% |
| ! | ATTAGTGGTGGAAAAGCTTG+GGG | - | chr7_2:77144869-77144888 | Msa1078260:intron | 40.0% |
| TGATTTCAGTTGCTTGTGCT+GGG | - | chr7_2:77144906-77144925 | Msa1078260:CDS | 40.0% | |
| CTTGTGCTGGGAAGATTATA+GGG | - | chr7_2:77144918-77144937 | Msa1078260:CDS | 40.0% | |
| ! | TTGTTGTTGCTATGATGTGG+AGG | - | chr7_2:77144945-77144964 | Msa1078260:CDS | 40.0% |
| AATGAGTTCAACGAGTCCTT+TGG | + | chr7_2:77145014-77145033 | None:intergenic | 40.0% | |
| AAACTTCCTCCGATGGAATC+TGG | - | chr7_2:77143528-77143547 | Msa1078260:CDS | 45.0% | |
| GAGGTTTGAAGAGGAAAGCT+AGG | + | chr7_2:77143631-77143650 | None:intergenic | 45.0% | |
| !! | ATGACTTTAGGTTGACGGAG+AGG | + | chr7_2:77143650-77143669 | None:intergenic | 45.0% |
| !! | CGGCTATGACTTTAGGTTGA+CGG | + | chr7_2:77143655-77143674 | None:intergenic | 45.0% |
| ACGATCTCGGCTATGACTTT+AGG | + | chr7_2:77143662-77143681 | None:intergenic | 45.0% | |
| TAGGGTACATACGACGATCT+CGG | + | chr7_2:77143675-77143694 | None:intergenic | 45.0% | |
| AGGGGAAAGTGAAAAACCGT+GGG | + | chr7_2:77143753-77143772 | None:intergenic | 45.0% | |
| AAGGGGAAAGTGAAAAACCG+TGG | + | chr7_2:77143754-77143773 | None:intergenic | 45.0% | |
| !!! | CTTTTAGGACCATCAGCTCT+AGG | - | chr7_2:77144041-77144060 | Msa1078260:CDS | 45.0% |
| ATCGAGGGAATATACGTTGC+AGG | + | chr7_2:77144082-77144101 | None:intergenic | 45.0% | |
| TGCAACGTATATTCCCTCGA+TGG | - | chr7_2:77144081-77144100 | Msa1078260:CDS | 45.0% | |
| TAGAAGACCTATGCTTGCGA+CGG | + | chr7_2:77144126-77144145 | None:intergenic | 45.0% | |
| GATCTAACTCGAGTCCAACA+AGG | + | chr7_2:77144160-77144179 | None:intergenic | 45.0% | |
| CTAAACTCAATTCGCCGTAC+CGG | - | chr7_2:77144179-77144198 | Msa1078260:CDS | 45.0% | |
| GCATTCAGTATAGCAGCTTG+TGG | - | chr7_2:77144209-77144228 | Msa1078260:CDS | 45.0% | |
| ATCTCACTTCCTTTCGTCTC+CGG | - | chr7_2:77144233-77144252 | Msa1078260:CDS | 45.0% | |
| ! | GTTTTCCGCAAAACCATCGA+CGG | - | chr7_2:77144272-77144291 | Msa1078260:CDS | 45.0% |
| GTGCAACTCCCATGAAAACT+AGG | + | chr7_2:77144325-77144344 | None:intergenic | 45.0% | |
| ATAACTGCATTCCCCGTCTT+AGG | - | chr7_2:77144350-77144369 | Msa1078260:CDS | 45.0% | |
| AGCTAGGATTCGTCCTAAGA+CGG | + | chr7_2:77144366-77144385 | None:intergenic | 45.0% | |
| AAACTTCTCACAACACGCGT+AGG | - | chr7_2:77144392-77144411 | Msa1078260:CDS | 45.0% | |
| TAAAGCGAGAAGAATCCACG+CGG | + | chr7_2:77144456-77144475 | None:intergenic | 45.0% | |
| GCTTTAGCAATCGCATTAGC+CGG | - | chr7_2:77144470-77144489 | Msa1078260:CDS | 45.0% | |
| ! | TTTAACCCTAGCGGGTGTAA+TGG | - | chr7_2:77144661-77144680 | Msa1078260:intron | 45.0% |
| TGAAACCATTACACCCGCTA+GGG | + | chr7_2:77144669-77144688 | None:intergenic | 45.0% | |
| ! | TTAGTGGTGGAAAAGCTTGG+GGG | - | chr7_2:77144870-77144889 | Msa1078260:intron | 45.0% |
| GTGATTTCAGTTGCTTGTGC+TGG | - | chr7_2:77144905-77144924 | Msa1078260:CDS | 45.0% | |
| GCTTGTGCTGGGAAGATTAT+AGG | - | chr7_2:77144917-77144936 | Msa1078260:CDS | 45.0% | |
| ! | GGAGTACTCATGAACACCAA+AGG | - | chr7_2:77144995-77145014 | Msa1078260:CDS | 45.0% |
| AAACTTCCTCCGATGGAATC+TGG | - | chr7_2:77143528-77143547 | Msa1078260:CDS | 45.0% | |
| GAGGTTTGAAGAGGAAAGCT+AGG | + | chr7_2:77143631-77143650 | None:intergenic | 45.0% | |
| !! | ATGACTTTAGGTTGACGGAG+AGG | + | chr7_2:77143650-77143669 | None:intergenic | 45.0% |
| !! | CGGCTATGACTTTAGGTTGA+CGG | + | chr7_2:77143655-77143674 | None:intergenic | 45.0% |
| ACGATCTCGGCTATGACTTT+AGG | + | chr7_2:77143662-77143681 | None:intergenic | 45.0% | |
| TAGGGTACATACGACGATCT+CGG | + | chr7_2:77143675-77143694 | None:intergenic | 45.0% | |
| AGGGGAAAGTGAAAAACCGT+GGG | + | chr7_2:77143753-77143772 | None:intergenic | 45.0% | |
| AAGGGGAAAGTGAAAAACCG+TGG | + | chr7_2:77143754-77143773 | None:intergenic | 45.0% | |
| !!! | CTTTTAGGACCATCAGCTCT+AGG | - | chr7_2:77144041-77144060 | Msa1078260:CDS | 45.0% |
| ATCGAGGGAATATACGTTGC+AGG | + | chr7_2:77144082-77144101 | None:intergenic | 45.0% | |
| TGCAACGTATATTCCCTCGA+TGG | - | chr7_2:77144081-77144100 | Msa1078260:CDS | 45.0% | |
| TAGAAGACCTATGCTTGCGA+CGG | + | chr7_2:77144126-77144145 | None:intergenic | 45.0% | |
| GATCTAACTCGAGTCCAACA+AGG | + | chr7_2:77144160-77144179 | None:intergenic | 45.0% | |
| CTAAACTCAATTCGCCGTAC+CGG | - | chr7_2:77144179-77144198 | Msa1078260:CDS | 45.0% | |
| GCATTCAGTATAGCAGCTTG+TGG | - | chr7_2:77144209-77144228 | Msa1078260:CDS | 45.0% | |
| ATCTCACTTCCTTTCGTCTC+CGG | - | chr7_2:77144233-77144252 | Msa1078260:CDS | 45.0% | |
| ! | GTTTTCCGCAAAACCATCGA+CGG | - | chr7_2:77144272-77144291 | Msa1078260:CDS | 45.0% |
| GTGCAACTCCCATGAAAACT+AGG | + | chr7_2:77144325-77144344 | None:intergenic | 45.0% | |
| ATAACTGCATTCCCCGTCTT+AGG | - | chr7_2:77144350-77144369 | Msa1078260:CDS | 45.0% | |
| AGCTAGGATTCGTCCTAAGA+CGG | + | chr7_2:77144366-77144385 | None:intergenic | 45.0% | |
| AAACTTCTCACAACACGCGT+AGG | - | chr7_2:77144392-77144411 | Msa1078260:CDS | 45.0% | |
| TAAAGCGAGAAGAATCCACG+CGG | + | chr7_2:77144456-77144475 | None:intergenic | 45.0% | |
| GCTTTAGCAATCGCATTAGC+CGG | - | chr7_2:77144470-77144489 | Msa1078260:CDS | 45.0% | |
| ! | TTTAACCCTAGCGGGTGTAA+TGG | - | chr7_2:77144661-77144680 | Msa1078260:intron | 45.0% |
| TGAAACCATTACACCCGCTA+GGG | + | chr7_2:77144669-77144688 | None:intergenic | 45.0% | |
| ! | TTAGTGGTGGAAAAGCTTGG+GGG | - | chr7_2:77144870-77144889 | Msa1078260:intron | 45.0% |
| GTGATTTCAGTTGCTTGTGC+TGG | - | chr7_2:77144905-77144924 | Msa1078260:CDS | 45.0% | |
| GCTTGTGCTGGGAAGATTAT+AGG | - | chr7_2:77144917-77144936 | Msa1078260:CDS | 45.0% | |
| ! | GGAGTACTCATGAACACCAA+AGG | - | chr7_2:77144995-77145014 | Msa1078260:CDS | 45.0% |
| ATCGCCTTGCCAGATTCCAT+CGG | + | chr7_2:77143540-77143559 | None:intergenic | 50.0% | |
| AGAGGGAAAGCGAAATCGAG+GGG | + | chr7_2:77143566-77143585 | None:intergenic | 50.0% | |
| GAGAGGGAAAGCGAAATCGA+GGG | + | chr7_2:77143567-77143586 | None:intergenic | 50.0% | |
| TGAAGAGGAAAGCTAGGGAG+CGG | + | chr7_2:77143625-77143644 | None:intergenic | 50.0% | |
| GTTGACGGAGAGGTTTGAAG+AGG | + | chr7_2:77143640-77143659 | None:intergenic | 50.0% | |
| ACTCGAGTCCAACAAGGAAG+AGG | + | chr7_2:77144154-77144173 | None:intergenic | 50.0% | |
| CTAGGATTCGTCCTAAGACG+GGG | + | chr7_2:77144364-77144383 | None:intergenic | 50.0% | |
| GCTAGGATTCGTCCTAAGAC+GGG | + | chr7_2:77144365-77144384 | None:intergenic | 50.0% | |
| ! | TCCGTCGTCGGATTCTTTTC+CGG | + | chr7_2:77144492-77144511 | None:intergenic | 50.0% |
| ! | GCTTTTACTGTCTCCGTCGT+CGG | + | chr7_2:77144504-77144523 | None:intergenic | 50.0% |
| ! | AAAGCCCACTTGTTGCCGTT+TGG | - | chr7_2:77144519-77144538 | Msa1078260:intron | 50.0% |
| ! | AAGCCCACTTGTTGCCGTTT+GGG | - | chr7_2:77144520-77144539 | Msa1078260:intron | 50.0% |
| GTACCCAAACGGCAACAAGT+GGG | + | chr7_2:77144526-77144545 | None:intergenic | 50.0% | |
| AGTACCCAAACGGCAACAAG+TGG | + | chr7_2:77144527-77144546 | None:intergenic | 50.0% | |
| !! | GCCAGAGAGAAGTACCCAAA+CGG | + | chr7_2:77144537-77144556 | None:intergenic | 50.0% |
| TTGAGCCACACGCTTCATCA+CGG | + | chr7_2:77144597-77144616 | None:intergenic | 50.0% | |
| TGTGGCTCAAAGATGCTCAG+TGG | - | chr7_2:77144607-77144626 | Msa1078260:intron | 50.0% | |
| CTGAAACCATTACACCCGCT+AGG | + | chr7_2:77144670-77144689 | None:intergenic | 50.0% | |
| ! | CTAGCGGGTGTAATGGTTTC+AGG | - | chr7_2:77144668-77144687 | Msa1078260:intron | 50.0% |
| TGGAAAAGCTTGGGGGCTAT+TGG | - | chr7_2:77144877-77144896 | Msa1078260:intron | 50.0% | |
| !!! | AGCTTGGGGGCTATTGGTTT+TGG | - | chr7_2:77144883-77144902 | Msa1078260:CDS | 50.0% |
| ATCGCCTTGCCAGATTCCAT+CGG | + | chr7_2:77143540-77143559 | None:intergenic | 50.0% | |
| AGAGGGAAAGCGAAATCGAG+GGG | + | chr7_2:77143566-77143585 | None:intergenic | 50.0% | |
| GAGAGGGAAAGCGAAATCGA+GGG | + | chr7_2:77143567-77143586 | None:intergenic | 50.0% | |
| TGAAGAGGAAAGCTAGGGAG+CGG | + | chr7_2:77143625-77143644 | None:intergenic | 50.0% | |
| GTTGACGGAGAGGTTTGAAG+AGG | + | chr7_2:77143640-77143659 | None:intergenic | 50.0% | |
| ACTCGAGTCCAACAAGGAAG+AGG | + | chr7_2:77144154-77144173 | None:intergenic | 50.0% | |
| CTAGGATTCGTCCTAAGACG+GGG | + | chr7_2:77144364-77144383 | None:intergenic | 50.0% | |
| GCTAGGATTCGTCCTAAGAC+GGG | + | chr7_2:77144365-77144384 | None:intergenic | 50.0% | |
| ! | TCCGTCGTCGGATTCTTTTC+CGG | + | chr7_2:77144492-77144511 | None:intergenic | 50.0% |
| ! | GCTTTTACTGTCTCCGTCGT+CGG | + | chr7_2:77144504-77144523 | None:intergenic | 50.0% |
| ! | AAAGCCCACTTGTTGCCGTT+TGG | - | chr7_2:77144519-77144538 | Msa1078260:intron | 50.0% |
| ! | AAGCCCACTTGTTGCCGTTT+GGG | - | chr7_2:77144520-77144539 | Msa1078260:intron | 50.0% |
| GTACCCAAACGGCAACAAGT+GGG | + | chr7_2:77144526-77144545 | None:intergenic | 50.0% | |
| AGTACCCAAACGGCAACAAG+TGG | + | chr7_2:77144527-77144546 | None:intergenic | 50.0% | |
| !! | GCCAGAGAGAAGTACCCAAA+CGG | + | chr7_2:77144537-77144556 | None:intergenic | 50.0% |
| TTGAGCCACACGCTTCATCA+CGG | + | chr7_2:77144597-77144616 | None:intergenic | 50.0% | |
| TGTGGCTCAAAGATGCTCAG+TGG | - | chr7_2:77144607-77144626 | Msa1078260:intron | 50.0% | |
| CTGAAACCATTACACCCGCT+AGG | + | chr7_2:77144670-77144689 | None:intergenic | 50.0% | |
| ! | CTAGCGGGTGTAATGGTTTC+AGG | - | chr7_2:77144668-77144687 | Msa1078260:intron | 50.0% |
| TGGAAAAGCTTGGGGGCTAT+TGG | - | chr7_2:77144877-77144896 | Msa1078260:intron | 50.0% | |
| !!! | AGCTTGGGGGCTATTGGTTT+TGG | - | chr7_2:77144883-77144902 | Msa1078260:CDS | 50.0% |
| TCCTCCGATGGAATCTGGCA+AGG | - | chr7_2:77143533-77143552 | Msa1078260:CDS | 55.0% | |
| GGAGAGGGAAAGCGAAATCG+AGG | + | chr7_2:77143568-77143587 | None:intergenic | 55.0% | |
| GCTAACGACGAGCACTAAGG+TGG | + | chr7_2:77143603-77143622 | None:intergenic | 55.0% | |
| CTGGAATCCGTCGCAAGCAT+AGG | - | chr7_2:77144116-77144135 | Msa1078260:CDS | 55.0% | |
| CTTCCTTTCGTCTCCGGCAT+TGG | - | chr7_2:77144239-77144258 | Msa1078260:CDS | 55.0% | |
| !! | CTGCTCCGTCGATGGTTTTG+CGG | + | chr7_2:77144280-77144299 | None:intergenic | 55.0% |
| ATCGACGGAGCAGACAAAGC+CGG | - | chr7_2:77144287-77144306 | Msa1078260:CDS | 55.0% | |
| ACGCGTAGGCGAAACTGCAA+TGG | - | chr7_2:77144406-77144425 | Msa1078260:CDS | 55.0% | |
| CATTCGACGACTTAACCGCG+TGG | - | chr7_2:77144438-77144457 | Msa1078260:CDS | 55.0% | |
| GCCGGAAAAGAATCCGACGA+CGG | - | chr7_2:77144488-77144507 | Msa1078260:CDS | 55.0% | |
| GCCGTTTGGGTACTTCTCTC+TGG | - | chr7_2:77144533-77144552 | Msa1078260:intron | 55.0% | |
| AAGTCCCGTGATGAAGCGTG+TGG | - | chr7_2:77144589-77144608 | Msa1078260:intron | 55.0% | |
| TGAGCCACACGCTTCATCAC+GGG | + | chr7_2:77144596-77144615 | None:intergenic | 55.0% | |
| TCCTCCGATGGAATCTGGCA+AGG | - | chr7_2:77143533-77143552 | Msa1078260:CDS | 55.0% | |
| GGAGAGGGAAAGCGAAATCG+AGG | + | chr7_2:77143568-77143587 | None:intergenic | 55.0% | |
| GCTAACGACGAGCACTAAGG+TGG | + | chr7_2:77143603-77143622 | None:intergenic | 55.0% | |
| CTGGAATCCGTCGCAAGCAT+AGG | - | chr7_2:77144116-77144135 | Msa1078260:CDS | 55.0% | |
| CTTCCTTTCGTCTCCGGCAT+TGG | - | chr7_2:77144239-77144258 | Msa1078260:CDS | 55.0% | |
| !! | CTGCTCCGTCGATGGTTTTG+CGG | + | chr7_2:77144280-77144299 | None:intergenic | 55.0% |
| ATCGACGGAGCAGACAAAGC+CGG | - | chr7_2:77144287-77144306 | Msa1078260:CDS | 55.0% | |
| ACGCGTAGGCGAAACTGCAA+TGG | - | chr7_2:77144406-77144425 | Msa1078260:CDS | 55.0% | |
| CATTCGACGACTTAACCGCG+TGG | - | chr7_2:77144438-77144457 | Msa1078260:CDS | 55.0% | |
| GCCGGAAAAGAATCCGACGA+CGG | - | chr7_2:77144488-77144507 | Msa1078260:CDS | 55.0% | |
| GCCGTTTGGGTACTTCTCTC+TGG | - | chr7_2:77144533-77144552 | Msa1078260:intron | 55.0% | |
| AAGTCCCGTGATGAAGCGTG+TGG | - | chr7_2:77144589-77144608 | Msa1078260:intron | 55.0% | |
| TGAGCCACACGCTTCATCAC+GGG | + | chr7_2:77144596-77144615 | None:intergenic | 55.0% | |
| GCCTTGCCAGATTCCATCGG+AGG | + | chr7_2:77143537-77143556 | None:intergenic | 60.0% | |
| GCGGCTAACGACGAGCACTA+AGG | + | chr7_2:77143606-77143625 | None:intergenic | 60.0% | |
| ! | GCGTTGGCATGCTCCATCGA+GGG | + | chr7_2:77144097-77144116 | None:intergenic | 60.0% |
| !! | AGCGTTGGCATGCTCCATCG+AGG | + | chr7_2:77144098-77144117 | None:intergenic | 60.0% |
| TCGATGGAGCATGCCAACGC+TGG | - | chr7_2:77144097-77144116 | Msa1078260:CDS | 60.0% | |
| ! | CTTGCGACGGATTCCAGCGT+TGG | + | chr7_2:77144113-77144132 | None:intergenic | 60.0% |
| ACGCCAATGCCGGAGACGAA+AGG | + | chr7_2:77144245-77144264 | None:intergenic | 60.0% | |
| AACAACGGCGACGCCAATGC+CGG | + | chr7_2:77144255-77144274 | None:intergenic | 60.0% | |
| ! | GGCTTTGTCTGCTCCGTCGA+TGG | + | chr7_2:77144288-77144307 | None:intergenic | 60.0% |
| GCCTTGCCAGATTCCATCGG+AGG | + | chr7_2:77143537-77143556 | None:intergenic | 60.0% | |
| GCGGCTAACGACGAGCACTA+AGG | + | chr7_2:77143606-77143625 | None:intergenic | 60.0% | |
| ! | GCGTTGGCATGCTCCATCGA+GGG | + | chr7_2:77144097-77144116 | None:intergenic | 60.0% |
| !! | AGCGTTGGCATGCTCCATCG+AGG | + | chr7_2:77144098-77144117 | None:intergenic | 60.0% |
| TCGATGGAGCATGCCAACGC+TGG | - | chr7_2:77144097-77144116 | Msa1078260:CDS | 60.0% | |
| ! | CTTGCGACGGATTCCAGCGT+TGG | + | chr7_2:77144113-77144132 | None:intergenic | 60.0% |
| ACGCCAATGCCGGAGACGAA+AGG | + | chr7_2:77144245-77144264 | None:intergenic | 60.0% | |
| AACAACGGCGACGCCAATGC+CGG | + | chr7_2:77144255-77144274 | None:intergenic | 60.0% | |
| ! | GGCTTTGTCTGCTCCGTCGA+TGG | + | chr7_2:77144288-77144307 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 77143503 | 77145060 | 77143503 | ID=Msa1078260;Name=Msa1078260 |
| chr7_2 | mRNA | 77143503 | 77145060 | 77143503 | ID=Msa1078260-mRNA-1;Parent=Msa1078260;Name=Msa1078260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|403 |
| chr7_2 | exon | 77144881 | 77145060 | 77144881 | ID=Msa1078260-mRNA-1:exon:18859;Parent=Msa1078260-mRNA-1 |
| chr7_2 | exon | 77143503 | 77144531 | 77143503 | ID=Msa1078260-mRNA-1:exon:18858;Parent=Msa1078260-mRNA-1 |
| chr7_2 | CDS | 77144881 | 77145060 | 77144881 | ID=Msa1078260-mRNA-1:cds;Parent=Msa1078260-mRNA-1 |
| chr7_2 | CDS | 77143503 | 77144531 | 77143503 | ID=Msa1078260-mRNA-1:cds;Parent=Msa1078260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
