AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1081630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081630 MtrunA17_Chr7g0268481 98.551 414 6 0 1 414 1 414 0.0 851
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081630 AT3G63000.1 73.123 413 109 2 2 414 3 413 0.0 640
Msa1081630 AT2G47970.1 72.816 412 110 2 1 412 2 411 0.0 625
Msa1081630 AT2G47970.2 73.939 330 84 2 1 330 2 329 2.02e-179 504

Find 129 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCATCATGGTTTCTGTTT+TGG 0.188102 7_2:-81459863 None:intergenic
AGGATTATACTTTATCTTAT+AGG 0.206775 7_2:+81460547 Msa1081630:CDS
TGTTTGTATTAGGTTGTTTA+AGG 0.234514 7_2:+81460701 Msa1081630:CDS
GAAGCCATTGCGGCTGGGTT+AGG 0.249374 7_2:+81460474 Msa1081630:CDS
TTCAACACATTTCTCTTCTT+CGG 0.258303 7_2:-81460454 None:intergenic
TCTTGAAATGTTTATGTTCA+TGG 0.263641 7_2:+81465161 Msa1081630:three_prime_UTR
TCAACACATTTCTCTTCTTC+GGG 0.294517 7_2:-81460453 None:intergenic
GGATTATACTTTATCTTATA+GGG 0.302046 7_2:+81460548 Msa1081630:CDS
TCTTGTATTAGCGAGGGTTT+TGG 0.304654 7_2:+81464760 Msa1081630:CDS
GAGTTGAGAATAATCGATTA+TGG 0.310328 7_2:-81459769 None:intergenic
AACACTGTTAAGGGAGTGTT+AGG 0.321437 7_2:-81460078 None:intergenic
TGCGATGATACTTCAAATAA+TGG 0.330206 7_2:+81465127 Msa1081630:three_prime_UTR
GAGTGTGAGTCAGGATAAAA+AGG 0.332027 7_2:+81460527 Msa1081630:CDS
AGATGAGTGATGTTTGTATT+AGG 0.338875 7_2:+81460691 Msa1081630:CDS
CGCTAGCCATGGACTCAATA+AGG 0.341742 7_2:-81464856 None:intergenic
TCGCAGTCACTTGAGTATTT+CGG 0.356507 7_2:-81464664 None:intergenic
TTCTCACCCGCTGGTTCATT+CGG 0.359645 7_2:+81460171 Msa1081630:CDS
GATAGGGTTTGGTTGTGTGT+GGG 0.362275 7_2:-81459988 None:intergenic
GGTTAGGGATGAAGAGGGTT+GGG 0.363125 7_2:+81460490 Msa1081630:CDS
AACAACATCCTTCTTCATAA+TGG 0.365054 7_2:-81460772 None:intergenic
AAGCCATTGCGGCTGGGTTA+GGG 0.375547 7_2:+81460475 Msa1081630:CDS
AGAGAGGTTTAACACTGTTA+AGG 0.394351 7_2:-81460088 None:intergenic
AGAGAATCCGCATTGTGAAT+TGG 0.402801 7_2:+81460248 Msa1081630:CDS
ATAAGGATCTGGTAACCTTC+AGG 0.403698 7_2:-81464839 None:intergenic
ATGTTTATGTTCATGGTTGC+CGG 0.413418 7_2:+81465168 Msa1081630:three_prime_UTR
TGAGTATTTCGGTTCTCAAC+GGG 0.415416 7_2:-81464653 None:intergenic
GAGAGGTTTAACACTGTTAA+GGG 0.420442 7_2:-81460087 None:intergenic
TGTTAAAATCTCTGATCATC+AGG 0.422478 7_2:+81460845 Msa1081630:CDS
TGTATTAGGTTGTTTAAGGA+AGG 0.423814 7_2:+81460705 Msa1081630:CDS
TTTGATTGGTGGATAGGGTT+TGG 0.426368 7_2:-81459999 None:intergenic
GGATAGGGTTTGGTTGTGTG+TGG 0.426808 7_2:-81459989 None:intergenic
GATGTTGTGTCTAGGTGCTC+GGG 0.429183 7_2:+81464885 Msa1081630:exon
ATGTTCATGGTTGCCGGAGA+TGG 0.436730 7_2:+81465174 Msa1081630:three_prime_UTR
TCGCGAAACACGCATCTGTT+TGG 0.436819 7_2:-81460223 None:intergenic
ATACATACATTAGCCAAAGT+TGG 0.440152 7_2:-81465223 None:intergenic
TGTGTTGAAGCCATTGCGGC+TGG 0.440333 7_2:+81460468 Msa1081630:CDS
GAAGGCGAACGTACGGTTCA+AGG 0.440991 7_2:+81460138 Msa1081630:CDS
GTGGTTTGATACTGAGGTTA+AGG 0.441340 7_2:+81460728 Msa1081630:CDS
GCTTGAGGTGAATGAGGAAA+TGG 0.447488 7_2:+81460638 Msa1081630:CDS
TAGGTGCTCGGGGCTCATGC+AGG 0.448534 7_2:+81464896 Msa1081630:three_prime_UTR
ATAGGGTTTGGTTGTGTGTG+GGG 0.449686 7_2:-81459987 None:intergenic
TATAGCTAAATACCCAACTT+TGG 0.450592 7_2:+81465210 Msa1081630:three_prime_UTR
TGATGTTGTGTCTAGGTGCT+CGG 0.451969 7_2:+81464884 Msa1081630:exon
TCTGAAATTCGCTTCACAAA+TGG 0.452230 7_2:-81464725 None:intergenic
GGGTTAGGGATGAAGAGGGT+TGG 0.452497 7_2:+81460489 Msa1081630:CDS
CACACACAATGTTTATATGT+TGG 0.459498 7_2:+81464988 Msa1081630:three_prime_UTR
TGAACCGCCACAACAAGGTT+TGG 0.459870 7_2:+81460404 Msa1081630:CDS
CCATGGACTCAATAAGGATC+TGG 0.460407 7_2:-81464850 None:intergenic
GCATGCTTCAGAAAGCTTTG+AGG 0.470411 7_2:-81465309 None:intergenic
CACCGCGCGTCGAGGAAGAA+AGG 0.476364 7_2:-81459694 None:intergenic
CCAGATCCTTATTGAGTCCA+TGG 0.476541 7_2:+81464850 Msa1081630:CDS
ATCTTCTTCTTGTATTAGCG+AGG 0.492507 7_2:+81464753 Msa1081630:CDS
TATGGTACTGTTACTGAAGA+AGG 0.492950 7_2:+81460357 Msa1081630:CDS
CGAGGGATTTAGCGAGGAGA+AGG 0.493570 7_2:-81460023 None:intergenic
ATTCGGTAAGAAGATGACTA+TGG 0.494823 7_2:+81460188 Msa1081630:CDS
GGTTTGACATGTCGGTGAAT+CGG 0.495709 7_2:-81460056 None:intergenic
TAATCATGTTCTATATGTCC+TGG 0.495903 7_2:+81464931 Msa1081630:three_prime_UTR
ATGAAGAAGGATGTTGTTGT+TGG 0.499562 7_2:+81460777 Msa1081630:CDS
AGCGAATTTATAGAGATGAA+TGG 0.501046 7_2:-81459801 None:intergenic
TCATGCTGAGAGTGGGTTGA+AGG 0.504168 7_2:+81460593 Msa1081630:CDS
AGAACATGATTAATTTGCTA+TGG 0.506555 7_2:-81464920 None:intergenic
CTGAGAGTGGGTTGAAGGAA+TGG 0.508694 7_2:+81460598 Msa1081630:CDS
AGCTTACGAAGGCGAACGTA+CGG 0.512867 7_2:+81460131 Msa1081630:CDS
TACATACATTAGCCAAAGTT+GGG 0.513480 7_2:-81465222 None:intergenic
AAAAGGGGTGGGTTTATGTA+TGG 0.514342 7_2:+81460339 Msa1081630:CDS
TTCTTCATAATGGACAGCTT+AGG 0.518346 7_2:-81460762 None:intergenic
ACGGGAAATGTTGACGAAAG+AGG 0.522396 7_2:-81464635 None:intergenic
GTATTAGGTTGTTTAAGGAA+GGG 0.524084 7_2:+81460706 Msa1081630:CDS
GGAAGGGTGGTTTGATACTG+AGG 0.525057 7_2:+81460722 Msa1081630:CDS
CGCTGCTTGATGTTGTGTCT+AGG 0.525650 7_2:+81464877 Msa1081630:exon
TAAGCTGTCCATTATGAAGA+AGG 0.525839 7_2:+81460764 Msa1081630:CDS
ACCGCGCGTCGAGGAAGAAA+GGG 0.526795 7_2:-81459693 None:intergenic
CCAGCGGGTGAGAAAGCGGT+TGG 0.533266 7_2:-81460162 None:intergenic
CCAACCGCTTTCTCACCCGC+TGG 0.539899 7_2:+81460162 Msa1081630:CDS
GGATGTTGTTGTTGGTGTGA+AGG 0.543462 7_2:+81460785 Msa1081630:CDS
CATCCCTAACCCAGCCGCAA+TGG 0.548359 7_2:-81460478 None:intergenic
ACTCTGTATCTGCACACATT+CGG 0.550137 7_2:-81464810 None:intergenic
GCTTCGAATTCTGAGCATCA+TGG 0.550588 7_2:-81459875 None:intergenic
ATGCTTGCAAAAGCCATCTC+CGG 0.552724 7_2:-81465187 None:intergenic
TCCAAACAACAAAACTGTCT+CGG 0.554548 7_2:+81459930 Msa1081630:CDS
AGTGTTAGGGTTTGACATGT+CGG 0.557594 7_2:-81460064 None:intergenic
TCCCTTTCTTCCTCGACGCG+CGG 0.557692 7_2:+81459692 Msa1081630:five_prime_UTR
TTAGGTTGTTTAAGGAAGGG+TGG 0.558790 7_2:+81460709 Msa1081630:CDS
TCCTCCAAACCTTGTTGTGG+CGG 0.560768 7_2:-81460408 None:intergenic
TCTTCTTCTTGTATTAGCGA+GGG 0.561071 7_2:+81464754 Msa1081630:CDS
TGTCAAGCTTGAGGTGAATG+AGG 0.561099 7_2:+81460632 Msa1081630:CDS
TTGAGTATTTCGGTTCTCAA+CGG 0.563120 7_2:-81464654 None:intergenic
TGAGAGTGGGTTGAAGGAAT+GGG 0.564311 7_2:+81460599 Msa1081630:CDS
CTGAGTATCATGCTGAGAGT+GGG 0.565336 7_2:+81460586 Msa1081630:CDS
TTATGGATTGCTTGTTGCAG+TGG 0.565634 7_2:-81459752 None:intergenic
TACTGTTACTGAAGAAGGAA+AGG 0.573036 7_2:+81460362 Msa1081630:CDS
TACCGCAGTTGTCAAGCTTG+AGG 0.577614 7_2:+81460623 Msa1081630:CDS
CGGCTGGGTTAGGGATGAAG+AGG 0.578163 7_2:+81460484 Msa1081630:CDS
GTTTGATACTGAGGTTAAGG+AGG 0.579045 7_2:+81460731 Msa1081630:CDS
ATCGTCTTCTTAGCTTACGA+AGG 0.581097 7_2:+81460120 Msa1081630:CDS
CACTGAAGAATCATCTTGAA+CGG 0.586206 7_2:+81464690 Msa1081630:CDS
TACTTCTCGTCGCATTACTG+CGG 0.586596 7_2:+81465023 Msa1081630:three_prime_UTR
CTTGAGGTGAATGAGGAAAT+GGG 0.589533 7_2:+81460639 Msa1081630:CDS
ACCGCCACAACAAGGTTTGG+AGG 0.593347 7_2:+81460407 Msa1081630:CDS
TATAAACATTGTGTGTGCAA+TGG 0.593410 7_2:-81464982 None:intergenic
CTCAGAATTCGAAGCCGCGA+TGG 0.594144 7_2:+81459883 Msa1081630:CDS
TTATCCTCCAAACCTTGTTG+TGG 0.596916 7_2:-81460411 None:intergenic
CTACATTACTGTCAAGAACC+AGG 0.597893 7_2:-81464949 None:intergenic
GCTGAGTATCATGCTGAGAG+TGG 0.598681 7_2:+81460585 Msa1081630:CDS
TGGTGTGAAGGATACTAAAG+AGG 0.599589 7_2:+81460797 Msa1081630:CDS
TGAACCAGCGGGTGAGAAAG+CGG 0.605884 7_2:-81460166 None:intergenic
GAATCGGAGAAGATCTTCGA+GGG 0.608023 7_2:-81460040 None:intergenic
AGACGATTGAACCGTGAGAG+AGG 0.609150 7_2:-81460104 None:intergenic
TACTGAAGAAGGAAAGGTTG+AGG 0.609468 7_2:+81460368 Msa1081630:CDS
TTCTTACCGAATGAACCAGC+GGG 0.616600 7_2:-81460177 None:intergenic
TGAATCGGAGAAGATCTTCG+AGG 0.622545 7_2:-81460041 None:intergenic
ATACAGAGTGCTGTACCTGA+AGG 0.632780 7_2:+81464824 Msa1081630:CDS
GATCTTCGAGGGATTTAGCG+AGG 0.638987 7_2:-81460029 None:intergenic
ACATCAAGCAGCGCTAGCCA+TGG 0.639284 7_2:-81464867 None:intergenic
TGCACACATTCGGTCAACGC+AGG 0.640204 7_2:-81464800 None:intergenic
ACAGTGTTAAACCTCTCTCA+CGG 0.642554 7_2:+81460093 Msa1081630:CDS
GTGTTGAAGCCATTGCGGCT+GGG 0.642856 7_2:+81460469 Msa1081630:CDS
ACACTGTTAAGGGAGTGTTA+GGG 0.645408 7_2:-81460077 None:intergenic
ATGTTGTGTCTAGGTGCTCG+GGG 0.650619 7_2:+81464886 Msa1081630:exon
GGCTGGGTTAGGGATGAAGA+GGG 0.655049 7_2:+81460485 Msa1081630:CDS
CATGAAAGAAGCTGTTCTAG+CGG 0.668911 7_2:-81465278 None:intergenic
AAATACTCAAGTGACTGCGA+TGG 0.671747 7_2:+81464667 Msa1081630:CDS
ATATATGAACCGCCACAACA+AGG 0.677948 7_2:+81460399 Msa1081630:CDS
CTTCTTACCGAATGAACCAG+CGG 0.678879 7_2:-81460178 None:intergenic
CACCTCAAGCTTGACAACTG+CGG 0.689297 7_2:-81460625 None:intergenic
GAAATGTGTTGAAGCCATTG+CGG 0.703684 7_2:+81460464 Msa1081630:CDS
AATGAAACCAATTCACAATG+CGG 0.706238 7_2:-81460255 None:intergenic
TTACTCGTTCTAGACCATCG+CGG 0.777558 7_2:-81459897 None:intergenic
GAGGTGAATGAGGAAATGGG+TGG 0.808334 7_2:+81460642 Msa1081630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTTAATAAATT+TGG - chr7_2:81463261-81463280 None:intergenic 0.0%
!!! AATAAGATGAAAATATTTTA+TGG + chr7_2:81461145-81461164 Msa1081630:intron 10.0%
!! ACTTATTACATTTAAATTTA+CGG - chr7_2:81463115-81463134 None:intergenic 10.0%
!! AAATTTAAATGTAATAAGTA+TGG + chr7_2:81463116-81463135 Msa1081630:intron 10.0%
!!! AAATAATTAAAGTTCTTTTT+GGG - chr7_2:81463142-81463161 None:intergenic 10.0%
!!! TAAATAATTAAAGTTCTTTT+TGG - chr7_2:81463143-81463162 None:intergenic 10.0%
!! AAAAGAACTTTAATTATTTA+TGG + chr7_2:81463143-81463162 Msa1081630:intron 10.0%
!! AAAGAACTTTAATTATTTAT+GGG + chr7_2:81463144-81463163 Msa1081630:intron 10.0%
!!! TTTTTTTTAATAAATTTGGT+TGG - chr7_2:81463257-81463276 None:intergenic 10.0%
!!! TAAAATGTTTAAAATATATG+GGG + chr7_2:81463317-81463336 Msa1081630:intron 10.0%
!! AAATTGATTACTAATATATT+TGG + chr7_2:81463406-81463425 Msa1081630:intron 10.0%
!!! TGTTAATGTTTTTAATTTAT+TGG + chr7_2:81465072-81465091 Msa1081630:three_prime_UTR 10.0%
!! AAATTGTTTATTATCCAATT+AGG - chr7_2:81461012-81461031 None:intergenic 15.0%
!! AAAATAGTTTATACCTTATA+TGG - chr7_2:81461117-81461136 None:intergenic 15.0%
!!! TTAACTTTTAATGTATAAGA+TGG + chr7_2:81461377-81461396 Msa1081630:intron 15.0%
!!! TAACTTTTAATGTATAAGAT+GGG + chr7_2:81461378-81461397 Msa1081630:intron 15.0%
!! TTGTAAAATTTCTAATCAAT+AGG + chr7_2:81461960-81461979 Msa1081630:intron 15.0%
!!! TTCAAATGGTTTTAAAATTA+GGG + chr7_2:81462819-81462838 Msa1081630:intron 15.0%
!!! CAATAATTAAAGTTCTTTTT+GGG - chr7_2:81463085-81463104 None:intergenic 15.0%
!! TTATTACATTTAAATTTACG+GGG - chr7_2:81463113-81463132 None:intergenic 15.0%
!! CTTATTACATTTAAATTTAC+GGG - chr7_2:81463114-81463133 None:intergenic 15.0%
!! TTATTACATTCAAATTTATG+AGG - chr7_2:81463174-81463193 None:intergenic 15.0%
!! AATGTAATAATAAAATTGCA+AGG + chr7_2:81463184-81463203 Msa1081630:intron 15.0%
!!! TCAATATATTTTTGAAACTA+CGG - chr7_2:81463284-81463303 None:intergenic 15.0%
!! TTATTAAAATAGAAAATCTG+AGG - chr7_2:81463638-81463657 None:intergenic 15.0%
!! AATCTAAAAGAAATTAATGT+TGG - chr7_2:81463714-81463733 None:intergenic 15.0%
!! ATTCATATTGTAAATAAACT+TGG - chr7_2:81463875-81463894 None:intergenic 15.0%
!! TTTCTAAATTGAATTAAAAG+AGG + chr7_2:81464284-81464303 Msa1081630:intron 15.0%
!! TTCTAAATTGAATTAAAAGA+GGG + chr7_2:81464285-81464304 Msa1081630:intron 15.0%
!!! AGGATAATCTATTGTTTTTT+AGG + chr7_2:81460427-81460446 Msa1081630:CDS 20.0%
!!! GGATAATCTATTGTTTTTTA+GGG + chr7_2:81460428-81460447 Msa1081630:CDS 20.0%
!! AGGATTATACTTTATCTTAT+AGG + chr7_2:81460547-81460566 Msa1081630:CDS 20.0%
!! GGATTATACTTTATCTTATA+GGG + chr7_2:81460548-81460567 Msa1081630:CDS 20.0%
!! AGTTAAACTATTTCCATATA+AGG + chr7_2:81461101-81461120 Msa1081630:intron 20.0%
!! AAATAACATACTACATACTT+AGG + chr7_2:81461985-81462004 Msa1081630:intron 20.0%
!! AATAACATACTACATACTTA+GGG + chr7_2:81461986-81462005 Msa1081630:intron 20.0%
!! ATTTCCATATTAAGTATTTG+TGG - chr7_2:81462033-81462052 None:intergenic 20.0%
!! TTGTAAAATTCCTAAACAAT+AGG + chr7_2:81462079-81462098 Msa1081630:intron 20.0%
!! AAATTACGTACTAAATACTT+AGG + chr7_2:81462104-81462123 Msa1081630:intron 20.0%
!!! ATACTTAGGTTAGTTAATAA+TGG + chr7_2:81462118-81462137 Msa1081630:intron 20.0%
!!! TACTTAGGTTAGTTAATAAT+GGG + chr7_2:81462119-81462138 Msa1081630:intron 20.0%
!!! ATTTGTCTTTTGTTTGTATT+TGG - chr7_2:81462456-81462475 None:intergenic 20.0%
!! TTGAAAACAAAAAAGAAACA+AGG + chr7_2:81462631-81462650 Msa1081630:intron 20.0%
!!! CTAATTTTAAAACCATTTGA+AGG - chr7_2:81462820-81462839 None:intergenic 20.0%
!!! CTTCAAATGGTTTTAAAATT+AGG + chr7_2:81462818-81462837 Msa1081630:intron 20.0%
!!! TTTTAAAATTAGGGTCAATT+TGG + chr7_2:81462828-81462847 Msa1081630:intron 20.0%
!!! TTTAAAATTAGGGTCAATTT+GGG + chr7_2:81462829-81462848 Msa1081630:intron 20.0%
!! ATTCCCATATTAAGTATTTA+CGG - chr7_2:81462990-81463009 None:intergenic 20.0%
!!! CCAATAATTAAAGTTCTTTT+TGG - chr7_2:81463086-81463105 None:intergenic 20.0%
!! CCAAAAAGAACTTTAATTAT+TGG + chr7_2:81463083-81463102 Msa1081630:intron 20.0%
!! TAATAAAATTGCAAGGATAA+TGG + chr7_2:81463191-81463210 Msa1081630:intron 20.0%
!! AATTTGATTATCTCAAACTT+GGG + chr7_2:81463358-81463377 Msa1081630:intron 20.0%
!!! TTAGATTTTTTAATCTTCCA+AGG + chr7_2:81463727-81463746 Msa1081630:intron 20.0%
!!! ATAAAAGATTTTCATGGTAT+TGG - chr7_2:81464079-81464098 None:intergenic 20.0%
!!! TACCATGAAAATCTTTTATT+TGG + chr7_2:81464080-81464099 Msa1081630:intron 20.0%
!! TGAAACTAAGAATGAAAATT+TGG + chr7_2:81464149-81464168 Msa1081630:intron 20.0%
!! AATTAAAAACATTAACACAC+TGG - chr7_2:81465069-81465088 None:intergenic 20.0%
!! TGTTTGTATTAGGTTGTTTA+AGG + chr7_2:81460701-81460720 Msa1081630:CDS 25.0%
!!! GGTTGATAATGATTTTTTCT+TGG + chr7_2:81460818-81460837 Msa1081630:CDS 25.0%
! TCCATGTTAGATAAATTATG+AGG + chr7_2:81460957-81460976 Msa1081630:intron 25.0%
! GAATCATTATTCATGTTTGT+GGG + chr7_2:81461353-81461372 Msa1081630:intron 25.0%
! TAAAGTTAAACCAACAAACA+TGG - chr7_2:81461555-81461574 None:intergenic 25.0%
! TAATTATTCACAAACATCAC+AGG - chr7_2:81461667-81461686 None:intergenic 25.0%
! TACTTAGGGTTATTTAATGA+TGG + chr7_2:81462000-81462019 Msa1081630:intron 25.0%
! ACTTAGGGTTATTTAATGAT+GGG + chr7_2:81462001-81462020 Msa1081630:intron 25.0%
!! TTTAGGAATTTTACAAGCAA+CGG - chr7_2:81462075-81462094 None:intergenic 25.0%
!! TATTGTCTATGTAATTTGTC+GGG - chr7_2:81462321-81462340 None:intergenic 25.0%
!! GTATTGTCTATGTAATTTGT+CGG - chr7_2:81462322-81462341 None:intergenic 25.0%
! ACAAACAAAAGACAAATGTA+AGG + chr7_2:81462459-81462478 Msa1081630:intron 25.0%
! AGAAGAGAAAAGACAATAAA+AGG + chr7_2:81462517-81462536 Msa1081630:intron 25.0%
! ACAAAGAAAAAATAGAGAAG+AGG + chr7_2:81462598-81462617 Msa1081630:intron 25.0%
! TTCCCATATTAAGTATTTAC+GGG - chr7_2:81462989-81463008 None:intergenic 25.0%
! GAATTTGATTATCTCAAACT+TGG + chr7_2:81463357-81463376 Msa1081630:intron 25.0%
! GAAATTTCGTACTATGATAT+TGG + chr7_2:81463519-81463538 Msa1081630:intron 25.0%
! TTAAAATAGAAAATCTGAGG+AGG - chr7_2:81463635-81463654 None:intergenic 25.0%
!! TAATTTTGTCTAAGCTTAGT+GGG + chr7_2:81463679-81463698 Msa1081630:intron 25.0%
!! AAAAGAAGTGTATAAATGTC+TGG + chr7_2:81463947-81463966 Msa1081630:intron 25.0%
! AGCTATACAGAAAAAACAAT+TGG - chr7_2:81463984-81464003 None:intergenic 25.0%
! GGTTACACAAAACATATAAT+TGG - chr7_2:81464018-81464037 None:intergenic 25.0%
!! TGATTTTTATGACATTGCTA+AGG - chr7_2:81464039-81464058 None:intergenic 25.0%
!! CTCCAAATAAAAGATTTTCA+TGG - chr7_2:81464085-81464104 None:intergenic 25.0%
!!! CATGAAAATCTTTTATTTGG+AGG + chr7_2:81464083-81464102 Msa1081630:intron 25.0%
!!! CTGTTCTATTTCAGTTTTTT+GGG - chr7_2:81464190-81464209 None:intergenic 25.0%
!!! ACTGTTCTATTTCAGTTTTT+TGG - chr7_2:81464191-81464210 None:intergenic 25.0%
! AAAACTGAAATAGAACAGTT+AGG + chr7_2:81464192-81464211 Msa1081630:intron 25.0%
! TATTGCGATGATTTATTTGT+TGG + chr7_2:81464443-81464462 Msa1081630:intron 25.0%
!!! AGAACATGATTAATTTGCTA+TGG - chr7_2:81464923-81464942 None:intergenic 25.0%
! TCTTGAAATGTTTATGTTCA+TGG + chr7_2:81465161-81465180 Msa1081630:three_prime_UTR 25.0%
GAGTTGAGAATAATCGATTA+TGG - chr7_2:81459772-81459791 None:intergenic 30.0%
AGCGAATTTATAGAGATGAA+TGG - chr7_2:81459804-81459823 None:intergenic 30.0%
!!! TTTCTGTTTTGGGATTTGTT+TGG - chr7_2:81459855-81459874 None:intergenic 30.0%
!! GTTTTTCGATGATTGTTTTG+AGG - chr7_2:81459957-81459976 None:intergenic 30.0%
AATGAAACCAATTCACAATG+CGG - chr7_2:81460258-81460277 None:intergenic 30.0%
TTCAACACATTTCTCTTCTT+CGG - chr7_2:81460457-81460476 None:intergenic 30.0%
AGATGAGTGATGTTTGTATT+AGG + chr7_2:81460691-81460710 Msa1081630:CDS 30.0%
! TGTATTAGGTTGTTTAAGGA+AGG + chr7_2:81460705-81460724 Msa1081630:CDS 30.0%
! GTATTAGGTTGTTTAAGGAA+GGG + chr7_2:81460706-81460725 Msa1081630:CDS 30.0%
AACAACATCCTTCTTCATAA+TGG - chr7_2:81460775-81460794 None:intergenic 30.0%
TGTTAAAATCTCTGATCATC+AGG + chr7_2:81460845-81460864 Msa1081630:CDS 30.0%
TAAACAAATGAGGAAAACAG+TGG - chr7_2:81460883-81460902 None:intergenic 30.0%
TAGCATGAAGTAAACAAATG+AGG - chr7_2:81460893-81460912 None:intergenic 30.0%
GCCTCATAATTTATCTAACA+TGG - chr7_2:81460961-81460980 None:intergenic 30.0%
AGATGCACAAAAATCCTAAT+TGG + chr7_2:81460995-81461014 Msa1081630:intron 30.0%
TTGTCTTGATTATGAGTGAA+TGG + chr7_2:81461325-81461344 Msa1081630:intron 30.0%
TTGATTATGAGTGAATGGTT+AGG + chr7_2:81461330-81461349 Msa1081630:intron 30.0%
TGATTATGAGTGAATGGTTA+GGG + chr7_2:81461331-81461350 Msa1081630:intron 30.0%
GGAATCATTATTCATGTTTG+TGG + chr7_2:81461352-81461371 Msa1081630:intron 30.0%
AGAATAAATCTCCATGTTTG+TGG + chr7_2:81461447-81461466 Msa1081630:intron 30.0%
GAATAAATCTCCATGTTTGT+GGG + chr7_2:81461448-81461467 Msa1081630:intron 30.0%
TAAAGTTAAACCCACAAACA+TGG - chr7_2:81461461-81461480 None:intergenic 30.0%
GAATAATTCTCCATGTTTGT+TGG + chr7_2:81461542-81461561 Msa1081630:intron 30.0%
CGAACAGTAGTCTAATTATA+CGG + chr7_2:81461695-81461714 Msa1081630:intron 30.0%
CAAAAAACAAGGTATGTACT+CGG - chr7_2:81461826-81461845 None:intergenic 30.0%
TGGTCCACAAATACTTAATA+TGG + chr7_2:81462026-81462045 Msa1081630:intron 30.0%
!! AATTTTACAAGCAACGGATT+CGG - chr7_2:81462069-81462088 None:intergenic 30.0%
! CGTAATTTTGCCTATTGTTT+AGG - chr7_2:81462092-81462111 None:intergenic 30.0%
AAAAAAAAAAGGTCGAACAG+TGG - chr7_2:81462297-81462316 None:intergenic 30.0%
ATTTGTCGGGGAAAAAAAAA+AGG - chr7_2:81462308-81462327 None:intergenic 30.0%
! ATTGTCTATGTAATTTGTCG+GGG - chr7_2:81462320-81462339 None:intergenic 30.0%
!!! ACTGTTTTGATTAAGACTTG+TGG - chr7_2:81462423-81462442 None:intergenic 30.0%
ACAAAAGACAAATGTAAGGA+CGG + chr7_2:81462463-81462482 Msa1081630:intron 30.0%
! TGTCTTTTCATTTATGGTTC+TGG - chr7_2:81462575-81462594 None:intergenic 30.0%
AGAACCATAAATGAAAAGAC+AGG + chr7_2:81462574-81462593 Msa1081630:intron 30.0%
! TGTTCCTGTCTTTTCATTTA+TGG - chr7_2:81462581-81462600 None:intergenic 30.0%
AGAAACAAGGAACTAAAAAG+AGG + chr7_2:81462644-81462663 Msa1081630:intron 30.0%
ACTAAAAAGAGGACAAAGAA+CGG + chr7_2:81462655-81462674 Msa1081630:intron 30.0%
AGAGAGTTGAGAAAATGTTA+GGG + chr7_2:81462772-81462791 Msa1081630:intron 30.0%
!!! AAACCATTTGAAGGCATTTT+GGG - chr7_2:81462811-81462830 None:intergenic 30.0%
!!! AAAACCATTTGAAGGCATTT+TGG - chr7_2:81462812-81462831 None:intergenic 30.0%
TTAACTGTAGCTTCTGTAAA+GGG - chr7_2:81463449-81463468 None:intergenic 30.0%
ATTAACTGTAGCTTCTGTAA+AGG - chr7_2:81463450-81463469 None:intergenic 30.0%
! TGAATGTTTGTTGCATGAAA+TGG + chr7_2:81463484-81463503 Msa1081630:intron 30.0%
! GAATGTTTGTTGCATGAAAT+GGG + chr7_2:81463485-81463504 Msa1081630:intron 30.0%
AAAACATACACACACAAACA+GGG - chr7_2:81463555-81463574 None:intergenic 30.0%
! GTAATTTTGTCTAAGCTTAG+TGG + chr7_2:81463678-81463697 Msa1081630:intron 30.0%
TAGAAAATAGTTGTCCTACT+TGG + chr7_2:81463803-81463822 Msa1081630:intron 30.0%
ACAGATAGAATTTGTAGTTC+AGG - chr7_2:81464551-81464570 None:intergenic 30.0%
TAATCATGTTCTATATGTCC+TGG + chr7_2:81464931-81464950 Msa1081630:three_prime_UTR 30.0%
TATAAACATTGTGTGTGCAA+TGG - chr7_2:81464985-81465004 None:intergenic 30.0%
CACACACAATGTTTATATGT+TGG + chr7_2:81464988-81465007 Msa1081630:three_prime_UTR 30.0%
TGCGATGATACTTCAAATAA+TGG + chr7_2:81465127-81465146 Msa1081630:three_prime_UTR 30.0%
TATAGCTAAATACCCAACTT+TGG + chr7_2:81465210-81465229 Msa1081630:three_prime_UTR 30.0%
TACATACATTAGCCAAAGTT+GGG - chr7_2:81465225-81465244 None:intergenic 30.0%
ATACATACATTAGCCAAAGT+TGG - chr7_2:81465226-81465245 None:intergenic 30.0%
! AGCATCATGGTTTCTGTTTT+GGG - chr7_2:81459865-81459884 None:intergenic 35.0%
TCCAAACAACAAAACTGTCT+CGG + chr7_2:81459930-81459949 Msa1081630:CDS 35.0%
!!! AAGGTTTTGATTGGTGGATA+GGG - chr7_2:81460007-81460026 None:intergenic 35.0%
GAGAGGTTTAACACTGTTAA+GGG - chr7_2:81460090-81460109 None:intergenic 35.0%
AGAGAGGTTTAACACTGTTA+AGG - chr7_2:81460091-81460110 None:intergenic 35.0%
ATTCGGTAAGAAGATGACTA+TGG + chr7_2:81460188-81460207 Msa1081630:CDS 35.0%
!! ATCTTGCTTTTGCTGTGAAA+AGG + chr7_2:81460322-81460341 Msa1081630:CDS 35.0%
!! TCTTGCTTTTGCTGTGAAAA+GGG + chr7_2:81460323-81460342 Msa1081630:CDS 35.0%
TATGGTACTGTTACTGAAGA+AGG + chr7_2:81460357-81460376 Msa1081630:CDS 35.0%
TACTGTTACTGAAGAAGGAA+AGG + chr7_2:81460362-81460381 Msa1081630:CDS 35.0%
TCAACACATTTCTCTTCTTC+GGG - chr7_2:81460456-81460475 None:intergenic 35.0%
!! TTCTTCATAATGGACAGCTT+AGG - chr7_2:81460765-81460784 None:intergenic 35.0%
TAAGCTGTCCATTATGAAGA+AGG + chr7_2:81460764-81460783 Msa1081630:CDS 35.0%
ATGAAGAAGGATGTTGTTGT+TGG + chr7_2:81460777-81460796 Msa1081630:CDS 35.0%
AAGCATTTGCGACACTATTT+GGG - chr7_2:81461200-81461219 None:intergenic 35.0%
TAAGCATTTGCGACACTATT+TGG - chr7_2:81461201-81461220 None:intergenic 35.0%
!! CATTTTGGGTCTGTATGAAT+TGG - chr7_2:81461248-81461267 None:intergenic 35.0%
! CTAGTGGGATTATGCATTTT+GGG - chr7_2:81461262-81461281 None:intergenic 35.0%
! TCTAGTGGGATTATGCATTT+TGG - chr7_2:81461263-81461282 None:intergenic 35.0%
! AACAAGAGTCAAGTTCTAGT+GGG - chr7_2:81461277-81461296 None:intergenic 35.0%
! AAACAAGAGTCAAGTTCTAG+TGG - chr7_2:81461278-81461297 None:intergenic 35.0%
!!! CTTGACTCTTGTTTTTGTGT+TGG + chr7_2:81461284-81461303 Msa1081630:intron 35.0%
ATATGAGGGGAACCATTTAT+TGG + chr7_2:81461408-81461427 Msa1081630:intron 35.0%
TTGTCGATGTAGAAAACTGT+AGG + chr7_2:81461627-81461646 Msa1081630:intron 35.0%
TGTCGATGTAGAAAACTGTA+GGG + chr7_2:81461628-81461647 Msa1081630:intron 35.0%
TACTATTGTCACTAGTAGTG+TGG - chr7_2:81461721-81461740 None:intergenic 35.0%
TGACAATAGTAGTTGCGATA+CGG + chr7_2:81461730-81461749 Msa1081630:intron 35.0%
CATGGGTACGACTTAAATTT+AGG + chr7_2:81461762-81461781 Msa1081630:intron 35.0%
TATCCAGGATTGACTACTAT+GGG - chr7_2:81462224-81462243 None:intergenic 35.0%
CTTATGTGAAAACACGATCT+GGG - chr7_2:81462727-81462746 None:intergenic 35.0%
GAGAGAGTTGAGAAAATGTT+AGG + chr7_2:81462771-81462790 Msa1081630:intron 35.0%
!!! AACCATTTGAAGGCATTTTG+GGG - chr7_2:81462810-81462829 None:intergenic 35.0%
TTCCTGGTAAAATCCAATAG+TGG + chr7_2:81462855-81462874 Msa1081630:intron 35.0%
! AACCACTATTGGATTTTACC+AGG - chr7_2:81462860-81462879 None:intergenic 35.0%
GGCCCGTAAATACTTAATAT+GGG + chr7_2:81462984-81463003 Msa1081630:intron 35.0%
AGCTATTAATGACTCACAGT+TGG + chr7_2:81463054-81463073 Msa1081630:intron 35.0%
TTAATGACTCACAGTTGGTT+TGG + chr7_2:81463059-81463078 Msa1081630:intron 35.0%
GAATTGATGCTTCTCATGAA+AGG + chr7_2:81463380-81463399 Msa1081630:intron 35.0%
GAAAACATACACACACAAAC+AGG - chr7_2:81463556-81463575 None:intergenic 35.0%
! GTTTGTGTGTGTATGTTTTC+TGG + chr7_2:81463556-81463575 Msa1081630:intron 35.0%
TCAAATCATTAGAGTCACCT+TGG - chr7_2:81463747-81463766 None:intergenic 35.0%
CTAAACTCAGAATACCAAGT+AGG - chr7_2:81463820-81463839 None:intergenic 35.0%
CTACTTGGTATTCTGAGTTT+AGG + chr7_2:81463818-81463837 Msa1081630:intron 35.0%
AAAAGTCCCTCTCTTTGAAT+TGG + chr7_2:81463844-81463863 Msa1081630:intron 35.0%
GCTAATCCAATTCAAAGAGA+GGG - chr7_2:81463853-81463872 None:intergenic 35.0%
!!! TTTCAGTTTTTTGGGTGTGA+AGG - chr7_2:81464182-81464201 None:intergenic 35.0%
TTAGGCTATGTTTGCAAGTT+GGG + chr7_2:81464210-81464229 Msa1081630:intron 35.0%
! GCGATGATTTATTTGTTGGT+TGG + chr7_2:81464447-81464466 Msa1081630:intron 35.0%
TAGAATTTGTAGTTCAGGCA+CGG - chr7_2:81464546-81464565 None:intergenic 35.0%
TTGAGTATTTCGGTTCTCAA+CGG - chr7_2:81464657-81464676 None:intergenic 35.0%
CACTGAAGAATCATCTTGAA+CGG + chr7_2:81464690-81464709 Msa1081630:CDS 35.0%
! TCTGAAATTCGCTTCACAAA+TGG - chr7_2:81464728-81464747 None:intergenic 35.0%
ATCTTCTTCTTGTATTAGCG+AGG + chr7_2:81464753-81464772 Msa1081630:CDS 35.0%
TCTTCTTCTTGTATTAGCGA+GGG + chr7_2:81464754-81464773 Msa1081630:CDS 35.0%
ATGTTTATGTTCATGGTTGC+CGG + chr7_2:81465168-81465187 Msa1081630:three_prime_UTR 35.0%
! TTATGGATTGCTTGTTGCAG+TGG - chr7_2:81459755-81459774 None:intergenic 40.0%
! GAGCATCATGGTTTCTGTTT+TGG - chr7_2:81459866-81459885 None:intergenic 40.0%
!!! TCCGAGACAGTTTTGTTGTT+TGG - chr7_2:81459934-81459953 None:intergenic 40.0%
! TTTGATTGGTGGATAGGGTT+TGG - chr7_2:81460002-81460021 None:intergenic 40.0%
!!! GAAGGTTTTGATTGGTGGAT+AGG - chr7_2:81460008-81460027 None:intergenic 40.0%
AGTGTTAGGGTTTGACATGT+CGG - chr7_2:81460067-81460086 None:intergenic 40.0%
!! ACACTGTTAAGGGAGTGTTA+GGG - chr7_2:81460080-81460099 None:intergenic 40.0%
!! AACACTGTTAAGGGAGTGTT+AGG - chr7_2:81460081-81460100 None:intergenic 40.0%
ACAGTGTTAAACCTCTCTCA+CGG + chr7_2:81460093-81460112 Msa1081630:CDS 40.0%
ATCGTCTTCTTAGCTTACGA+AGG + chr7_2:81460120-81460139 Msa1081630:CDS 40.0%
AGAGAATCCGCATTGTGAAT+TGG + chr7_2:81460248-81460267 Msa1081630:CDS 40.0%
!! CTTGCTTTTGCTGTGAAAAG+GGG + chr7_2:81460324-81460343 Msa1081630:CDS 40.0%
! AAAAGGGGTGGGTTTATGTA+TGG + chr7_2:81460339-81460358 Msa1081630:CDS 40.0%
TACTGAAGAAGGAAAGGTTG+AGG + chr7_2:81460368-81460387 Msa1081630:CDS 40.0%
ATATATGAACCGCCACAACA+AGG + chr7_2:81460399-81460418 Msa1081630:CDS 40.0%
TTATCCTCCAAACCTTGTTG+TGG - chr7_2:81460414-81460433 None:intergenic 40.0%
GAAATGTGTTGAAGCCATTG+CGG + chr7_2:81460464-81460483 Msa1081630:CDS 40.0%
! TTTTACTCAGAGTGTGAGTC+AGG + chr7_2:81460518-81460537 Msa1081630:CDS 40.0%
GAGTGTGAGTCAGGATAAAA+AGG + chr7_2:81460527-81460546 Msa1081630:CDS 40.0%
CTTGAGGTGAATGAGGAAAT+GGG + chr7_2:81460639-81460658 Msa1081630:CDS 40.0%
! TTAGGTTGTTTAAGGAAGGG+TGG + chr7_2:81460709-81460728 Msa1081630:CDS 40.0%
GTGGTTTGATACTGAGGTTA+AGG + chr7_2:81460728-81460747 Msa1081630:CDS 40.0%
GTTTGATACTGAGGTTAAGG+AGG + chr7_2:81460731-81460750 Msa1081630:CDS 40.0%
TGGTGTGAAGGATACTAAAG+AGG + chr7_2:81460797-81460816 Msa1081630:CDS 40.0%
AAGATGGGCGACAAAATATG+AGG + chr7_2:81461393-81461412 Msa1081630:intron 40.0%
AGATGGGCGACAAAATATGA+GGG + chr7_2:81461394-81461413 Msa1081630:intron 40.0%
CCTATCACTCCTCCAATAAA+TGG - chr7_2:81461423-81461442 None:intergenic 40.0%
CCATTTATTGGAGGAGTGAT+AGG + chr7_2:81461420-81461439 Msa1081630:intron 40.0%
AAGATGAGCGAGAAAATGTG+AGG + chr7_2:81461488-81461507 Msa1081630:intron 40.0%
AGATGAGCGAGAAAATGTGA+GGG + chr7_2:81461489-81461508 Msa1081630:intron 40.0%
AATTAGACTACTGTTCGTCG+TGG - chr7_2:81461692-81461711 None:intergenic 40.0%
AGTACAGAGCGCAAAAAACA+AGG - chr7_2:81461837-81461856 None:intergenic 40.0%
!! GGGTTATTTAATGATGGGCT+TGG + chr7_2:81462006-81462025 Msa1081630:intron 40.0%
ATCCAGGATTGACTACTATG+GGG - chr7_2:81462223-81462242 None:intergenic 40.0%
CTATCCAGGATTGACTACTA+TGG - chr7_2:81462225-81462244 None:intergenic 40.0%
TAGTAGTCAATCCTGGATAG+CGG + chr7_2:81462225-81462244 Msa1081630:intron 40.0%
!! TATACGCTATCCCACTTTTG+GGG - chr7_2:81462265-81462284 None:intergenic 40.0%
!! CTATACGCTATCCCACTTTT+GGG - chr7_2:81462266-81462285 None:intergenic 40.0%
! ACTATACGCTATCCCACTTT+TGG - chr7_2:81462267-81462286 None:intergenic 40.0%
AAAAGTGGGATAGCGTATAG+TGG + chr7_2:81462266-81462285 Msa1081630:intron 40.0%
AAAGTGGGATAGCGTATAGT+GGG + chr7_2:81462267-81462286 Msa1081630:intron 40.0%
AAAAAGAGGACAAAGAACGG+AGG + chr7_2:81462658-81462677 Msa1081630:intron 40.0%
AACGGAGGAAGATAGATGTA+TGG + chr7_2:81462673-81462692 Msa1081630:intron 40.0%
GCTTATGTGAAAACACGATC+TGG - chr7_2:81462728-81462747 None:intergenic 40.0%
! ACATAAGCTCGTGTGTTTTG+TGG + chr7_2:81462740-81462759 Msa1081630:intron 40.0%
ATCCCCAAAATGCCTTCAAA+TGG + chr7_2:81462805-81462824 Msa1081630:intron 40.0%
CGGCCCGTAAATACTTAATA+TGG + chr7_2:81462983-81463002 Msa1081630:intron 40.0%
ATATGGGAATAAGTGCTCGT+TGG + chr7_2:81463000-81463019 Msa1081630:intron 40.0%
GGCTAATCCAATTCAAAGAG+AGG - chr7_2:81463854-81463873 None:intergenic 40.0%
!! CTTTTATTTGGAGGACTGTC+TGG + chr7_2:81464092-81464111 Msa1081630:intron 40.0%
!!! TTTTTTGGGTGTGAAGGAGT+GGG - chr7_2:81464176-81464195 None:intergenic 40.0%
GTTAGGCTATGTTTGCAAGT+TGG + chr7_2:81464209-81464228 Msa1081630:intron 40.0%
! TATGTTTGCAAGTTGGGTAG+AGG + chr7_2:81464216-81464235 Msa1081630:intron 40.0%
! ATGTTTGCAAGTTGGGTAGA+GGG + chr7_2:81464217-81464236 Msa1081630:intron 40.0%
! TTAAGGGTATGCTTGCGATT+GGG - chr7_2:81464401-81464420 None:intergenic 40.0%
GTCATGTTAGCAGACCTTAA+GGG - chr7_2:81464417-81464436 None:intergenic 40.0%
TGTCATGTTAGCAGACCTTA+AGG - chr7_2:81464418-81464437 None:intergenic 40.0%
GTTGGATGTCATGATGTGAT+TGG + chr7_2:81464465-81464484 Msa1081630:intron 40.0%
! TGTGTTGCTACCAAATTGCA+GGG + chr7_2:81464611-81464630 Msa1081630:intron 40.0%
TGAGTATTTCGGTTCTCAAC+GGG - chr7_2:81464656-81464675 None:intergenic 40.0%
TCGCAGTCACTTGAGTATTT+CGG - chr7_2:81464667-81464686 None:intergenic 40.0%
AAATACTCAAGTGACTGCGA+TGG + chr7_2:81464667-81464686 Msa1081630:CDS 40.0%
! TCTTGTATTAGCGAGGGTTT+TGG + chr7_2:81464760-81464779 Msa1081630:CDS 40.0%
ACTCTGTATCTGCACACATT+CGG - chr7_2:81464813-81464832 None:intergenic 40.0%
ATAAGGATCTGGTAACCTTC+AGG - chr7_2:81464842-81464861 None:intergenic 40.0%
CTACATTACTGTCAAGAACC+AGG - chr7_2:81464952-81464971 None:intergenic 40.0%
CATGAAAGAAGCTGTTCTAG+CGG - chr7_2:81465281-81465300 None:intergenic 40.0%
GCTTCGAATTCTGAGCATCA+TGG - chr7_2:81459878-81459897 None:intergenic 45.0%
! TTACTCGTTCTAGACCATCG+CGG - chr7_2:81459900-81459919 None:intergenic 45.0%
! ATAGGGTTTGGTTGTGTGTG+GGG - chr7_2:81459990-81460009 None:intergenic 45.0%
! GATAGGGTTTGGTTGTGTGT+GGG - chr7_2:81459991-81460010 None:intergenic 45.0%
!!! GAGGAGAAGGTTTTGATTGG+TGG - chr7_2:81460013-81460032 None:intergenic 45.0%
!! AGCGAGGAGAAGGTTTTGAT+TGG - chr7_2:81460016-81460035 None:intergenic 45.0%
GAATCGGAGAAGATCTTCGA+GGG - chr7_2:81460043-81460062 None:intergenic 45.0%
TGAATCGGAGAAGATCTTCG+AGG - chr7_2:81460044-81460063 None:intergenic 45.0%
GGTTTGACATGTCGGTGAAT+CGG - chr7_2:81460059-81460078 None:intergenic 45.0%
TTCTTACCGAATGAACCAGC+GGG - chr7_2:81460180-81460199 None:intergenic 45.0%
CTTCTTACCGAATGAACCAG+CGG - chr7_2:81460181-81460200 None:intergenic 45.0%
!! CTTTTGCTGTGAAAAGGGGT+GGG + chr7_2:81460328-81460347 Msa1081630:CDS 45.0%
CTGAGTATCATGCTGAGAGT+GGG + chr7_2:81460586-81460605 Msa1081630:CDS 45.0%
!! TGAGAGTGGGTTGAAGGAAT+GGG + chr7_2:81460599-81460618 Msa1081630:CDS 45.0%
TGTCAAGCTTGAGGTGAATG+AGG + chr7_2:81460632-81460651 Msa1081630:CDS 45.0%
GCTTGAGGTGAATGAGGAAA+TGG + chr7_2:81460638-81460657 Msa1081630:CDS 45.0%
! GGATGTTGTTGTTGGTGTGA+AGG + chr7_2:81460785-81460804 Msa1081630:CDS 45.0%
GATGGGCGACAAAATATGAG+GGG + chr7_2:81461395-81461414 Msa1081630:intron 45.0%
TGAGGGGAACCATTTATTGG+AGG + chr7_2:81461411-81461430 Msa1081630:intron 45.0%
GATGAGCGAGAAAATGTGAG+GGG + chr7_2:81461490-81461509 Msa1081630:intron 45.0%
CCTTTCACTCCGCTGATAAA+TGG - chr7_2:81461517-81461536 None:intergenic 45.0%
CCATTTATCAGCGGAGTGAA+AGG + chr7_2:81461514-81461533 Msa1081630:intron 45.0%
TATCAGCGGAGTGAAAGGTT+AGG + chr7_2:81461519-81461538 Msa1081630:intron 45.0%
ATCAGCGGAGTGAAAGGTTA+GGG + chr7_2:81461520-81461539 Msa1081630:intron 45.0%
ATGAGCGAGAAAATGCGACT+AGG + chr7_2:81461585-81461604 Msa1081630:intron 45.0%
AAGTCGTACCCATGCTTCAA+AGG - chr7_2:81461756-81461775 None:intergenic 45.0%
TTGCGCTCTGTACTCATCTT+TGG + chr7_2:81461843-81461862 Msa1081630:intron 45.0%
!! TAATAATGGGCTTGTCCCCA+TGG + chr7_2:81462132-81462151 Msa1081630:intron 45.0%
TATCCGGGATTGACTACCAT+GGG - chr7_2:81462151-81462170 None:intergenic 45.0%
TTCCCCATAGTAGTCAATCC+TGG + chr7_2:81462218-81462237 Msa1081630:intron 45.0%
AGTAGTCAATCCTGGATAGC+GGG + chr7_2:81462226-81462245 Msa1081630:intron 45.0%
AGGACGGAGATAGAAGCAAA+TGG + chr7_2:81462479-81462498 Msa1081630:intron 45.0%
!! GGGTCAATTTGGGATTTTCC+TGG + chr7_2:81462839-81462858 Msa1081630:intron 45.0%
TGCGGATTCTGAACCACTAT+TGG - chr7_2:81462871-81462890 None:intergenic 45.0%
ATAGCTGCTATAGCGGTTTG+CGG - chr7_2:81462889-81462908 None:intergenic 45.0%
AACCGCTATAGCAGCTATAG+CGG + chr7_2:81462891-81462910 Msa1081630:intron 45.0%
AGCTATGACGCTTACTGTAG+CGG + chr7_2:81462915-81462934 Msa1081630:intron 45.0%
! CTGCAGCTCAAGTATTGTCT+TGG + chr7_2:81463025-81463044 Msa1081630:intron 45.0%
CATGAAATGGGTGCGATATG+TGG + chr7_2:81463497-81463516 Msa1081630:intron 45.0%
!!! GTTTTTTGGGTGTGAAGGAG+TGG - chr7_2:81464177-81464196 None:intergenic 45.0%
! GTATGCTTGCGATTGGGTTT+TGG - chr7_2:81464395-81464414 None:intergenic 45.0%
! CTTAAGGGTATGCTTGCGAT+TGG - chr7_2:81464402-81464421 None:intergenic 45.0%
CAATCGCAAGCATACCCTTA+AGG + chr7_2:81464400-81464419 Msa1081630:intron 45.0%
GATGACATTGACACGACAAG+CGG - chr7_2:81464524-81464543 None:intergenic 45.0%
! GTGTGTTGCTACCAAATTGC+AGG + chr7_2:81464610-81464629 Msa1081630:intron 45.0%
!! ATACAGAGTGCTGTACCTGA+AGG + chr7_2:81464824-81464843 Msa1081630:CDS 45.0%
CCATGGACTCAATAAGGATC+TGG - chr7_2:81464853-81464872 None:intergenic 45.0%
CCAGATCCTTATTGAGTCCA+TGG + chr7_2:81464850-81464869 Msa1081630:CDS 45.0%
TGATGTTGTGTCTAGGTGCT+CGG + chr7_2:81464884-81464903 Msa1081630:exon 45.0%
TACTTCTCGTCGCATTACTG+CGG + chr7_2:81465023-81465042 Msa1081630:three_prime_UTR 45.0%
ATGCTTGCAAAAGCCATCTC+CGG - chr7_2:81465190-81465209 None:intergenic 45.0%
!!! ATTAAAATGTTTAAAATATA+TGG + chr7_2:81463315-81463334 Msa1081630:intron 5.0%
!!! TTAAAATGTTTAAAATATAT+GGG + chr7_2:81463316-81463335 Msa1081630:intron 5.0%
!!! TTTGAAAATTTTAAAAATTA+AGG - chr7_2:81464345-81464364 None:intergenic 5.0%
! GGATAGGGTTTGGTTGTGTG+TGG - chr7_2:81459992-81460011 None:intergenic 50.0%
GATCTTCGAGGGATTTAGCG+AGG - chr7_2:81460032-81460051 None:intergenic 50.0%
AGACGATTGAACCGTGAGAG+AGG - chr7_2:81460107-81460126 None:intergenic 50.0%
AGCTTACGAAGGCGAACGTA+CGG + chr7_2:81460131-81460150 Msa1081630:CDS 50.0%
!! TTCTCACCCGCTGGTTCATT+CGG + chr7_2:81460171-81460190 Msa1081630:CDS 50.0%
TCGCGAAACACGCATCTGTT+TGG - chr7_2:81460226-81460245 None:intergenic 50.0%
!! GCTTTTGCTGTGAAAAGGGG+TGG + chr7_2:81460327-81460346 Msa1081630:CDS 50.0%
TGAACCGCCACAACAAGGTT+TGG + chr7_2:81460404-81460423 Msa1081630:CDS 50.0%
! TCCTCCAAACCTTGTTGTGG+CGG - chr7_2:81460411-81460430 None:intergenic 50.0%
GGTTAGGGATGAAGAGGGTT+GGG + chr7_2:81460490-81460509 Msa1081630:CDS 50.0%
GCTGAGTATCATGCTGAGAG+TGG + chr7_2:81460585-81460604 Msa1081630:CDS 50.0%
!! TCATGCTGAGAGTGGGTTGA+AGG + chr7_2:81460593-81460612 Msa1081630:CDS 50.0%
!! CTGAGAGTGGGTTGAAGGAA+TGG + chr7_2:81460598-81460617 Msa1081630:CDS 50.0%
TACCGCAGTTGTCAAGCTTG+AGG + chr7_2:81460623-81460642 Msa1081630:CDS 50.0%
CACCTCAAGCTTGACAACTG+CGG - chr7_2:81460628-81460647 None:intergenic 50.0%
GAGGTGAATGAGGAAATGGG+TGG + chr7_2:81460642-81460661 Msa1081630:CDS 50.0%
GGAAGGGTGGTTTGATACTG+AGG + chr7_2:81460722-81460741 Msa1081630:CDS 50.0%
GTGAGGGGACCATTTATCAG+CGG + chr7_2:81461505-81461524 Msa1081630:intron 50.0%
!! CGATACGGCCTTTGAAGCAT+GGG + chr7_2:81461745-81461764 Msa1081630:intron 50.0%
GGTACTGCTCAGTGCTTAGA+TGG + chr7_2:81461864-81461883 Msa1081630:intron 50.0%
ATGTCATCTTCGTCGCGTCT+TGG - chr7_2:81461919-81461938 None:intergenic 50.0%
TTTACAAGCCACCCCCACAT+CGG - chr7_2:81461947-81461966 None:intergenic 50.0%
ATCCGGGATTGACTACCATG+GGG - chr7_2:81462150-81462169 None:intergenic 50.0%
CTATCCGGGATTGACTACCA+TGG - chr7_2:81462152-81462171 None:intergenic 50.0%
TATCCGCTATCCCACGTTTG+GGG - chr7_2:81462192-81462211 None:intergenic 50.0%
CTATCCGCTATCCCACGTTT+GGG - chr7_2:81462193-81462212 None:intergenic 50.0%
ACTATCCGCTATCCCACGTT+TGG - chr7_2:81462194-81462213 None:intergenic 50.0%
!! AAACGTGGGATAGCGGATAG+TGG + chr7_2:81462193-81462212 Msa1081630:intron 50.0%
!! AACGTGGGATAGCGGATAGT+GGG + chr7_2:81462194-81462213 Msa1081630:intron 50.0%
GTAGTCAATCCTGGATAGCG+GGG + chr7_2:81462227-81462246 Msa1081630:intron 50.0%
! TGGGATAGCGTATAGTGGGA+TGG + chr7_2:81462271-81462290 Msa1081630:intron 50.0%
TGGTAGCAGATCGTGTGAGA+AGG + chr7_2:81462693-81462712 Msa1081630:intron 50.0%
TGCCGCTATAGCTGCTATAG+CGG - chr7_2:81462896-81462915 None:intergenic 50.0%
ACGACTTTACCATTGCGCCA+AGG + chr7_2:81463607-81463626 Msa1081630:intron 50.0%
GAAAATCTGAGGAGGAGCCT+TGG - chr7_2:81463627-81463646 None:intergenic 50.0%
ATTGACACGACAAGCGGAAG+AGG - chr7_2:81464518-81464537 None:intergenic 50.0%
CGAAAGAGGACCCTGCAATT+TGG - chr7_2:81464624-81464643 None:intergenic 50.0%
CGCTAGCCATGGACTCAATA+AGG - chr7_2:81464859-81464878 None:intergenic 50.0%
CGCTGCTTGATGTTGTGTCT+AGG + chr7_2:81464877-81464896 Msa1081630:exon 50.0%
GATGTTGTGTCTAGGTGCTC+GGG + chr7_2:81464885-81464904 Msa1081630:exon 50.0%
ATGTTGTGTCTAGGTGCTCG+GGG + chr7_2:81464886-81464905 Msa1081630:exon 50.0%
ATGTTCATGGTTGCCGGAGA+TGG + chr7_2:81465174-81465193 Msa1081630:three_prime_UTR 50.0%
CTCAGAATTCGAAGCCGCGA+TGG + chr7_2:81459883-81459902 Msa1081630:CDS 55.0%
CGAGGGATTTAGCGAGGAGA+AGG - chr7_2:81460026-81460045 None:intergenic 55.0%
GAAGGCGAACGTACGGTTCA+AGG + chr7_2:81460138-81460157 Msa1081630:CDS 55.0%
TGAACCAGCGGGTGAGAAAG+CGG - chr7_2:81460169-81460188 None:intergenic 55.0%
ACCGCCACAACAAGGTTTGG+AGG + chr7_2:81460407-81460426 Msa1081630:CDS 55.0%
TGTGTTGAAGCCATTGCGGC+TGG + chr7_2:81460468-81460487 Msa1081630:CDS 55.0%
GTGTTGAAGCCATTGCGGCT+GGG + chr7_2:81460469-81460488 Msa1081630:CDS 55.0%
AAGCCATTGCGGCTGGGTTA+GGG + chr7_2:81460475-81460494 Msa1081630:CDS 55.0%
! GGCTGGGTTAGGGATGAAGA+GGG + chr7_2:81460485-81460504 Msa1081630:CDS 55.0%
GGGTTAGGGATGAAGAGGGT+TGG + chr7_2:81460489-81460508 Msa1081630:CDS 55.0%
!! GCGATACGGCCTTTGAAGCA+TGG + chr7_2:81461744-81461763 Msa1081630:intron 55.0%
AGATGACATGCTCGCCGATG+TGG + chr7_2:81461930-81461949 Msa1081630:intron 55.0%
GATGACATGCTCGCCGATGT+GGG + chr7_2:81461931-81461950 Msa1081630:intron 55.0%
ATGACATGCTCGCCGATGTG+GGG + chr7_2:81461932-81461951 Msa1081630:intron 55.0%
GTCCCCATGGTAGTCAATCC+CGG + chr7_2:81462145-81462164 Msa1081630:intron 55.0%
!!! CGCTATCCCACTTTTGGGGT+CGG - chr7_2:81462261-81462280 None:intergenic 55.0%
GTTAACAGCGCGCTATAGCG+GGG - chr7_2:81462964-81462983 None:intergenic 55.0%
CGTTAACAGCGCGCTATAGC+GGG - chr7_2:81462965-81462984 None:intergenic 55.0%
CCGTTAACAGCGCGCTATAG+CGG - chr7_2:81462966-81462985 None:intergenic 55.0%
CCGCTATAGCGCGCTGTTAA+CGG + chr7_2:81462963-81462982 Msa1081630:intron 55.0%
CCTTCGCAGTAGCGATTAGC+AGG - chr7_2:81463776-81463795 None:intergenic 55.0%
CCTGCTAATCGCTACTGCGA+AGG + chr7_2:81463773-81463792 Msa1081630:intron 55.0%
TGCACACATTCGGTCAACGC+AGG - chr7_2:81464803-81464822 None:intergenic 55.0%
ACATCAAGCAGCGCTAGCCA+TGG - chr7_2:81464870-81464889 None:intergenic 55.0%
TCCCTTTCTTCCTCGACGCG+CGG + chr7_2:81459692-81459711 Msa1081630:five_prime_UTR 60.0%
ACCGCGCGTCGAGGAAGAAA+GGG - chr7_2:81459696-81459715 None:intergenic 60.0%
ACTTACTTCACCGCGCGTCG+AGG - chr7_2:81459705-81459724 None:intergenic 60.0%
GAAGCCATTGCGGCTGGGTT+AGG + chr7_2:81460474-81460493 Msa1081630:CDS 60.0%
CATCCCTAACCCAGCCGCAA+TGG - chr7_2:81460481-81460500 None:intergenic 60.0%
! CGGCTGGGTTAGGGATGAAG+AGG + chr7_2:81460484-81460503 Msa1081630:CDS 60.0%
TGACATGCTCGCCGATGTGG+GGG + chr7_2:81461933-81461952 Msa1081630:intron 60.0%
! CGCTATCCCACGTTTGGGGT+CGG - chr7_2:81462188-81462207 None:intergenic 60.0%
CGACCCCAAACGTGGGATAG+CGG + chr7_2:81462186-81462205 Msa1081630:intron 60.0%
TAGCGGCCGACCCCAAAAGT+GGG + chr7_2:81462252-81462271 Msa1081630:intron 60.0%
CACCGCGCGTCGAGGAAGAA+AGG - chr7_2:81459697-81459716 None:intergenic 65.0%
CCAGCGGGTGAGAAAGCGGT+TGG - chr7_2:81460165-81460184 None:intergenic 65.0%
CCAACCGCTTTCTCACCCGC+TGG + chr7_2:81460162-81460181 Msa1081630:CDS 65.0%
TCCCGGATAGCAGCGCGTAG+CGG + chr7_2:81462162-81462181 Msa1081630:intron 65.0%
TAGCGGCCGACCCCAAACGT+GGG + chr7_2:81462179-81462198 Msa1081630:intron 65.0%
!! TCCTGGATAGCGGGGCGTAG+CGG + chr7_2:81462235-81462254 Msa1081630:intron 65.0%
GTAGCGGCCGACCCCAAAAG+TGG + chr7_2:81462251-81462270 Msa1081630:intron 65.0%
GAGGAGGAGCCTTGGCGCAA+TGG - chr7_2:81463619-81463638 None:intergenic 65.0%
TAGGTGCTCGGGGCTCATGC+AGG + chr7_2:81464896-81464915 Msa1081630:three_prime_UTR 65.0%
CATGCTCGCCGATGTGGGGG+TGG + chr7_2:81461936-81461955 Msa1081630:intron 70.0%
GCCGCTACGCGCTGCTATCC+GGG - chr7_2:81462166-81462185 None:intergenic 70.0%
GGCCGCTACGCGCTGCTATC+CGG - chr7_2:81462167-81462186 None:intergenic 70.0%
GTAGCGGCCGACCCCAAACG+TGG + chr7_2:81462178-81462197 Msa1081630:intron 70.0%
GCCGCTACGCCCCGCTATCC+AGG - chr7_2:81462239-81462258 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 81459652 81465320 81459652 ID=Msa1081630;Name=Msa1081630
chr7_2 mRNA 81459652 81465320 81459652 ID=Msa1081630-mRNA-1;Parent=Msa1081630;Name=Msa1081630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=225|1|1|1|1|1|2|434|414
chr7_2 exon 81459652 81460866 81459652 ID=Msa1081630-mRNA-1:exon:20847;Parent=Msa1081630-mRNA-1
chr7_2 exon 81464632 81465320 81464632 ID=Msa1081630-mRNA-1:exon:20848;Parent=Msa1081630-mRNA-1
chr7_2 five_prime_UTR 81459652 81459876 81459652 ID=Msa1081630-mRNA-1:five_prime_utr;Parent=Msa1081630-mRNA-1
chr7_2 CDS 81459877 81460866 81459877 ID=Msa1081630-mRNA-1:cds;Parent=Msa1081630-mRNA-1
chr7_2 CDS 81464632 81464886 81464632 ID=Msa1081630-mRNA-1:cds;Parent=Msa1081630-mRNA-1
chr7_2 three_prime_UTR 81464887 81465320 81464887 ID=Msa1081630-mRNA-1:three_prime_utr;Parent=Msa1081630-mRNA-1
Gene Sequence

>Msa1081630

ATGATGCTCAGAATTCGAAGCCGCGATGGTCTAGAACGAGTAACACTCGATAATCCAAACAACAAAACTGTCTCGGACCTCAAAACAATCATCGAAAAACAACTTAGAATCCCCACACACAACCAAACCCTATCCACCAATCAAAACCTTCTCCTCGCTAAATCCCTCGAAGATCTTCTCCGATTCACCGACATGTCAAACCCTAACACTCCCTTAACAGTGTTAAACCTCTCTCACGGTTCAATCGTCTTCTTAGCTTACGAAGGCGAACGTACGGTTCAAGGTCCAACCGCTTTCTCACCCGCTGGTTCATTCGGTAAGAAGATGACTATGGATGATCTCATCGCCAAACAGATGCGTGTTTCGCGACAAGAGAATCCGCATTGTGAATTGGTTTCATTTGATCGCGATTGTGCAAATGCTTTTCAGCATTATGTGAATGAGAATCTTGCTTTTGCTGTGAAAAGGGGTGGGTTTATGTATGGTACTGTTACTGAAGAAGGAAAGGTTGAGGTGAATTTTATATATGAACCGCCACAACAAGGTTTGGAGGATAATCTATTGTTTTTTAGGGATCCCGAAGAAGAGAAATGTGTTGAAGCCATTGCGGCTGGGTTAGGGATGAAGAGGGTTGGGTTTATTTTTACTCAGAGTGTGAGTCAGGATAAAAAGGATTATACTTTATCTTATAGGGAAGTGCTGCAAGCTGCTGAGTATCATGCTGAGAGTGGGTTGAAGGAATGGGTTACCGCAGTTGTCAAGCTTGAGGTGAATGAGGAAATGGGTGGTGCTGATGTTCATTTTGAAGCTTTTCAGATGAGTGATGTTTGTATTAGGTTGTTTAAGGAAGGGTGGTTTGATACTGAGGTTAAGGAGGATCATGATCCTAAGCTGTCCATTATGAAGAAGGATGTTGTTGTTGGTGTGAAGGATACTAAAGAGGTTGATAATGATTTTTTCTTGGTTGTTGTTAAAATCTCTGATCATCAGGGTCCTCTTTCGTCAACATTTCCCGTTGAGAACCGAAATACTCAAGTGACTGCGATGGCACTGAAGAATCATCTTGAACGGACTAAAAATCTTCCATTTGTGAAGCGAATTTCAGATTTTCATCTTCTTCTTGTATTAGCGAGGGTTTTGGATGTGTCTGCTGATGTTCCTGCGTTGACCGAATGTGTGCAGATACAGAGTGCTGTACCTGAAGGTTACCAGATCCTTATTGAGTCCATGGCTAGCGCTGCTTGA
Protein sequence

>Msa1081630

MMLRIRSRDGLERVTLDNPNNKTVSDLKTIIEKQLRIPTHNQTLSTNQNLLLAKSLEDLLRFTDMSNPNTPLTVLNLSHGSIVFLAYEGERTVQGPTAFSPAGSFGKKMTMDDLIAKQMRVSRQENPHCELVSFDRDCANAFQHYVNENLAFAVKRGGFMYGTVTEEGKVEVNFIYEPPQQGLEDNLLFFRDPEEEKCVEAIAAGLGMKRVGFIFTQSVSQDKKDYTLSYREVLQAAEYHAESGLKEWVTAVVKLEVNEEMGGADVHFEAFQMSDVCIRLFKEGWFDTEVKEDHDPKLSIMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSTFPVENRNTQVTAMALKNHLERTKNLPFVKRISDFHLLLVLARVLDVSADVPALTECVQIQSAVPEGYQILIESMASAA*