Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082540 | XP_024626292.1 | 91.717 | 495 | 16 | 2 | 1 | 495 | 1 | 470 | 0.0 | 928 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082540 | I3T416 | 90.909 | 495 | 18 | 2 | 1 | 495 | 1 | 468 | 0.0 | 797 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1081670 | Msa1082540 | 0.805098 | 1.572895e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082540 | MtrunA17_Chr7g0270211 | 91.313 | 495 | 16 | 2 | 1 | 495 | 1 | 468 | 0.0 | 794 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082540 | AT3G62330.1 | 51.195 | 502 | 204 | 11 | 6 | 495 | 7 | 479 | 3.21e-139 | 410 |
| Msa1082540 | AT3G62330.2 | 51.804 | 388 | 152 | 7 | 6 | 388 | 7 | 364 | 2.04e-111 | 335 |
Find 156 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGGCCTCATGGTAATTT+TGG | 0.176506 | 7_2:+82625830 | Msa1082540:CDS |
| AACTCTTATAATTCATTTAA+TGG | 0.181957 | 7_2:+82624654 | Msa1082540:CDS |
| ATCCAGTTTCTTGTTTAATA+TGG | 0.206073 | 7_2:+82626403 | Msa1082540:three_prime_UTR |
| CCAAAGCTACTGAGAGAAAT+TGG | 0.250333 | 7_2:+82622574 | Msa1082540:CDS |
| CAACATACTTACCTACCTTA+TGG | 0.254054 | 7_2:-82626337 | None:intergenic |
| CTAAAATCGTCGTCAATATC+TGG | 0.261155 | 7_2:-82622375 | None:intergenic |
| TCTTCATTTCGTGAAGCTTA+TGG | 0.267831 | 7_2:+82624567 | Msa1082540:CDS |
| TTGCTTGTTGTTGACGCCTC+TGG | 0.269586 | 7_2:-82625661 | None:intergenic |
| CTTACATTTCTGTCTCTTGC+AGG | 0.289233 | 7_2:-82623803 | None:intergenic |
| TAAGTATGTTGATTAATCTT+AGG | 0.289447 | 7_2:+82626349 | Msa1082540:three_prime_UTR |
| ATTAGAGTTAGAGTATAAAA+AGG | 0.294208 | 7_2:+82624794 | Msa1082540:CDS |
| GTCATAACATGGGCACTTAT+AGG | 0.296537 | 7_2:+82624682 | Msa1082540:CDS |
| CCAATTTCTCTCAGTAGCTT+TGG | 0.319678 | 7_2:-82622574 | None:intergenic |
| TTGGGAAGGGACATGCATTC+TGG | 0.338059 | 7_2:+82626373 | Msa1082540:three_prime_UTR |
| AATCTTACTTATAACTTTCT+CGG | 0.338549 | 7_2:-82623837 | None:intergenic |
| AGAGAAGTCCTGTTAATTCC+AGG | 0.343211 | 7_2:+82624056 | Msa1082540:CDS |
| TAGAGAGGAAGGTGAACAAA+AGG | 0.344612 | 7_2:+82623964 | Msa1082540:CDS |
| CCTTTCAGTAAATACTCTTC+AGG | 0.347913 | 7_2:-82624404 | None:intergenic |
| AAAATTCTCTCCGTCGATAT+CGG | 0.348985 | 7_2:-82622329 | None:intergenic |
| TTGTTTGCTCCAAGAGTAGA+TGG | 0.354982 | 7_2:-82623752 | None:intergenic |
| TGTAAATTATGTGGTGAATC+TGG | 0.363570 | 7_2:+82622624 | Msa1082540:CDS |
| AACATACTTACCTACCTTAT+GGG | 0.365752 | 7_2:-82626336 | None:intergenic |
| TGCTCTCTCTTGAACAGATC+CGG | 0.368116 | 7_2:-82622433 | None:intergenic |
| TAGGGTTGTCCATCTACTCT+TGG | 0.383053 | 7_2:+82623743 | Msa1082540:intron |
| CATTGTTTACCATCCATTAC+CGG | 0.384194 | 7_2:+82626466 | Msa1082540:three_prime_UTR |
| AAATTACCATGAGGCCTTGT+AGG | 0.384732 | 7_2:-82625827 | None:intergenic |
| TGCTTGTTGTTGACGCCTCT+GGG | 0.385578 | 7_2:-82625660 | None:intergenic |
| TCTTGCCTGCCAAACCTTTG+AGG | 0.393160 | 7_2:-82624136 | None:intergenic |
| AACCATATTAAACAAGAAAC+TGG | 0.396810 | 7_2:-82626405 | None:intergenic |
| GGTATCCAGGAGACATTTGT+TGG | 0.400337 | 7_2:-82625685 | None:intergenic |
| TGCATAGACAGAAATGTTAC+TGG | 0.409179 | 7_2:-82626633 | None:intergenic |
| AAACCAGTTGGAATAGCATT+AGG | 0.410070 | 7_2:-82622516 | None:intergenic |
| CCTGTATGTGAGGCTTGTCT+TGG | 0.411871 | 7_2:-82624630 | None:intergenic |
| AAAATCAACCAGTCATTCAT+AGG | 0.420779 | 7_2:-82626517 | None:intergenic |
| GAGAAATTCATTATTGTTAG+TGG | 0.425015 | 7_2:+82623893 | Msa1082540:CDS |
| GATCCTAATGCTATTCCAAC+TGG | 0.426095 | 7_2:+82622513 | Msa1082540:CDS |
| ATTGAACAAGTCACCGGTAA+TGG | 0.427965 | 7_2:-82626479 | None:intergenic |
| CGCTGAAACCTGGAATTAAC+AGG | 0.429154 | 7_2:-82624064 | None:intergenic |
| TACCTTTGGAGTCACGGAAT+AGG | 0.431804 | 7_2:+82625780 | Msa1082540:CDS |
| TGGTGGAAACAATTTACCTT+TGG | 0.432200 | 7_2:+82625766 | Msa1082540:CDS |
| AGGTAAATTGTTTCCACCAT+AGG | 0.433472 | 7_2:-82625762 | None:intergenic |
| TGGTAAGGATAGGTTAGTTA+TGG | 0.433855 | 7_2:+82623913 | Msa1082540:CDS |
| CCACCATAGGGAGGATTGAC+AGG | 0.436236 | 7_2:-82625749 | None:intergenic |
| CCTCAGTTTCCTCAAAGGTT+TGG | 0.436272 | 7_2:+82624127 | Msa1082540:CDS |
| AACAAATGTCTCCTGGATAC+CGG | 0.439748 | 7_2:+82625687 | Msa1082540:CDS |
| CCAAGACAAGCCTCACATAC+AGG | 0.441668 | 7_2:+82624630 | Msa1082540:CDS |
| ATTCATTATTGTTAGTGGTA+AGG | 0.444515 | 7_2:+82623898 | Msa1082540:CDS |
| GAATAGGTTCTCAAACAGTA+TGG | 0.448781 | 7_2:+82625796 | Msa1082540:CDS |
| TGTTTATAGCCCCGGTATCC+AGG | 0.457359 | 7_2:-82625698 | None:intergenic |
| GATTCTCATAGGAGAGAATC+TGG | 0.460700 | 7_2:+82624717 | Msa1082540:CDS |
| AGAGAGCAAAATCGAACAAA+AGG | 0.462268 | 7_2:+82622448 | Msa1082540:CDS |
| TGTTGATTAATCTTAGGATT+GGG | 0.463338 | 7_2:+82626355 | Msa1082540:three_prime_UTR |
| ACAAATGTCTCCTGGATACC+GGG | 0.466554 | 7_2:+82625688 | Msa1082540:CDS |
| TGATCGGTTAATCTGAGAAC+TGG | 0.471571 | 7_2:-82623993 | None:intergenic |
| ATGTTGATTAATCTTAGGAT+TGG | 0.473640 | 7_2:+82626354 | Msa1082540:three_prime_UTR |
| AGTTTCCTCAAAGGTTTGGC+AGG | 0.474360 | 7_2:+82624131 | Msa1082540:CDS |
| TGCTTTGTTACAATCAATCC+AGG | 0.474930 | 7_2:+82626556 | Msa1082540:three_prime_UTR |
| GGTAAATTGTTTCCACCATA+GGG | 0.480049 | 7_2:-82625761 | None:intergenic |
| TAAGCCGTGATGCTAAGGTC+TGG | 0.480801 | 7_2:+82622541 | Msa1082540:CDS |
| CATGGGATGCCTCAAACACC+TGG | 0.481125 | 7_2:-82626574 | None:intergenic |
| AAGTTATAAGTAAGATTGAA+AGG | 0.483840 | 7_2:+82623843 | Msa1082540:CDS |
| TAACACCTACTCGATCAATC+TGG | 0.483908 | 7_2:-82626301 | None:intergenic |
| CCATGAGGCCTTGTAGGATA+AGG | 0.486332 | 7_2:-82625821 | None:intergenic |
| GCATCCCATGTGTGTTCTTG+TGG | 0.487622 | 7_2:+82626587 | Msa1082540:three_prime_UTR |
| ATGACGGGTGGGATTCTCAT+AGG | 0.491698 | 7_2:+82624706 | Msa1082540:CDS |
| TACACTGGTCCTGTAGGATC+CGG | 0.492783 | 7_2:+82622414 | Msa1082540:CDS |
| TAAATGAACAAGAGCCCATA+AGG | 0.493278 | 7_2:+82626322 | Msa1082540:three_prime_UTR |
| ACAATCAATCCAGGTGTTTG+AGG | 0.495827 | 7_2:+82626565 | Msa1082540:three_prime_UTR |
| TCGTCGTCAATATCTGGATC+GGG | 0.501317 | 7_2:-82622369 | None:intergenic |
| ACAATTTACCTTTGGAGTCA+CGG | 0.501550 | 7_2:+82625774 | Msa1082540:CDS |
| CACTTATAGGAATGACGGGT+GGG | 0.501869 | 7_2:+82624695 | Msa1082540:CDS |
| TTGTGATCAAAGTGTTGGCC+AGG | 0.507335 | 7_2:-82624747 | None:intergenic |
| GCAATCCAACAAATGTCTCC+TGG | 0.514307 | 7_2:+82625680 | Msa1082540:CDS |
| AAGCCGTGATGCTAAGGTCT+GGG | 0.517930 | 7_2:+82622542 | Msa1082540:CDS |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.519039 | 7_2:-82624033 | None:intergenic |
| AGGACGGAGATAATTGTTGA+AGG | 0.519761 | 7_2:-82624384 | None:intergenic |
| AGTTATAAGTAAGATTGAAA+GGG | 0.520213 | 7_2:+82623844 | Msa1082540:CDS |
| ATCGTCGTCAATATCTGGAT+CGG | 0.521045 | 7_2:-82622370 | None:intergenic |
| TCTCCTGTCAATCCTCCCTA+TGG | 0.523647 | 7_2:+82625746 | Msa1082540:CDS |
| GACTTGTTCAATGATATTTG+TGG | 0.532061 | 7_2:+82626490 | Msa1082540:three_prime_UTR |
| TTCCACGCATACAAAACAAT+GGG | 0.537109 | 7_2:+82625616 | Msa1082540:CDS |
| CATTGGCTGCAAAATTAAGA+TGG | 0.539929 | 7_2:+82623868 | Msa1082540:CDS |
| TTTCATAAGCCGTGATGCTA+AGG | 0.540938 | 7_2:+82622536 | Msa1082540:CDS |
| GTTCTCAGATTAACCGATCA+AGG | 0.541651 | 7_2:+82623996 | Msa1082540:CDS |
| GACCTTGATCGGTGAGGTGG+TGG | 0.542651 | 7_2:-82624022 | None:intergenic |
| TATGTAAGTGGAACAAGCGA+AGG | 0.544367 | 7_2:-82622291 | None:intergenic |
| CACCACCACCTCACCGATCA+AGG | 0.546549 | 7_2:+82624020 | Msa1082540:CDS |
| AGTAAGATTGAAAGGGACAT+TGG | 0.550835 | 7_2:+82623851 | Msa1082540:CDS |
| AGAGAATCTGGCATCCAACC+TGG | 0.552227 | 7_2:+82624729 | Msa1082540:CDS |
| CTCTCCGTCGATATCGGCGA+TGG | 0.556638 | 7_2:-82622323 | None:intergenic |
| CTTCCCAGACCTTAGCATCA+CGG | 0.556692 | 7_2:-82622545 | None:intergenic |
| TGAACAGATCCGGATCCTAC+AGG | 0.557652 | 7_2:-82622423 | None:intergenic |
| TAATGGACAAAGTCATAACA+TGG | 0.557743 | 7_2:+82624671 | Msa1082540:CDS |
| CCTGTCAATCCTCCCTATGG+TGG | 0.562319 | 7_2:+82625749 | Msa1082540:CDS |
| TTATTGTTAGTGGTAAGGAT+AGG | 0.562634 | 7_2:+82623903 | Msa1082540:CDS |
| ATTCTTCTAGAGTATGAAGT+GGG | 0.563036 | 7_2:-82624773 | None:intergenic |
| AGTCTCAAGAATTATTTCAA+AGG | 0.563474 | 7_2:+82623777 | Msa1082540:CDS |
| GTGGAGATCCTATGAATGAC+TGG | 0.564154 | 7_2:+82626509 | Msa1082540:three_prime_UTR |
| GAGGTGGTGGTGACCTTGAT+CGG | 0.565416 | 7_2:-82624009 | None:intergenic |
| GATTAATCTTAGGATTGGGA+AGG | 0.565438 | 7_2:+82626359 | Msa1082540:three_prime_UTR |
| ACAGGACTTCTCTGAGGTGG+TGG | 0.567295 | 7_2:-82624046 | None:intergenic |
| CCTTATCCTACAAGGCCTCA+TGG | 0.568761 | 7_2:+82625821 | Msa1082540:CDS |
| GATAGGTTAGTTATGGCTAA+AGG | 0.569288 | 7_2:+82623920 | Msa1082540:CDS |
| ATACACCTCAGTTTCCTCAA+AGG | 0.570797 | 7_2:+82624122 | Msa1082540:CDS |
| GACCAGTGTACTCTTTGTAT+AGG | 0.573298 | 7_2:-82622401 | None:intergenic |
| GAAATGATTTGTAAATTATG+TGG | 0.573666 | 7_2:+82622615 | Msa1082540:CDS |
| TTTGGTGAATTTCAGAGACG+TGG | 0.574410 | 7_2:+82625848 | Msa1082540:CDS |
| ACTTCCATCGCCGATATCGA+CGG | 0.574935 | 7_2:+82622319 | Msa1082540:five_prime_UTR |
| AACAAGCGAAGGGATAGAAA+TGG | 0.577091 | 7_2:-82622280 | None:intergenic |
| AGAGAGGAAGGTGAACAAAA+GGG | 0.582535 | 7_2:+82623965 | Msa1082540:CDS |
| ATGGGCACTTATAGGAATGA+CGG | 0.583334 | 7_2:+82624690 | Msa1082540:CDS |
| TCGAACAAAAGGTCAAATGC+AGG | 0.585317 | 7_2:+82622459 | Msa1082540:CDS |
| ATTAATCTTAGGATTGGGAA+GGG | 0.586388 | 7_2:+82626360 | Msa1082540:three_prime_UTR |
| TGGGCACTTATAGGAATGAC+GGG | 0.587886 | 7_2:+82624691 | Msa1082540:CDS |
| TCACGGCTTATGAAACCAGT+TGG | 0.589003 | 7_2:-82622528 | None:intergenic |
| CAAGACAAGCCTCACATACA+GGG | 0.589341 | 7_2:+82624631 | Msa1082540:CDS |
| AACAAGTCACCGGTAATGGA+TGG | 0.590373 | 7_2:-82626475 | None:intergenic |
| GATCAAAGTGTTGGCCAGGT+TGG | 0.598440 | 7_2:-82624743 | None:intergenic |
| GTGCATAAGATTAGAGAGGA+AGG | 0.603186 | 7_2:+82623953 | Msa1082540:CDS |
| AAAATCCACAAGAACACACA+TGG | 0.604152 | 7_2:-82626592 | None:intergenic |
| ATAAGAGTTCCCTGTATGTG+AGG | 0.605160 | 7_2:-82624640 | None:intergenic |
| AGAAAATTTAAAACATCGTG+AGG | 0.606495 | 7_2:+82624860 | Msa1082540:CDS |
| AAAGAGTACACTGGTCCTGT+AGG | 0.608456 | 7_2:+82622408 | Msa1082540:CDS |
| GTATGGAGCCTTATCCTACA+AGG | 0.609509 | 7_2:+82625813 | Msa1082540:CDS |
| ATGTAAGTGGAACAAGCGAA+GGG | 0.617196 | 7_2:-82622290 | None:intergenic |
| AATATCATTGAACAAGTCAC+CGG | 0.617462 | 7_2:-82626485 | None:intergenic |
| GGTGACCTTGATCGGTGAGG+TGG | 0.622749 | 7_2:-82624025 | None:intergenic |
| TGAACAAGAGCCCATAAGGT+AGG | 0.625975 | 7_2:+82626326 | Msa1082540:three_prime_UTR |
| TTTGCAAGAGATTCTCAACA+AGG | 0.632870 | 7_2:+82624199 | Msa1082540:CDS |
| GTTCCACGCATACAAAACAA+TGG | 0.633278 | 7_2:+82625615 | Msa1082540:CDS |
| AACCTATTCCGTGACTCCAA+AGG | 0.634103 | 7_2:-82625782 | None:intergenic |
| CCAAACCTTTGAGGAAACTG+AGG | 0.639849 | 7_2:-82624127 | None:intergenic |
| GGGCATTGTGATCAAAGTGT+TGG | 0.639911 | 7_2:-82624752 | None:intergenic |
| TGGATCGGGAATATTCGCCA+TGG | 0.639958 | 7_2:-82622355 | None:intergenic |
| AGGGTCCAGATTGATCGAGT+AGG | 0.646824 | 7_2:+82626296 | Msa1082540:intron |
| TTAACAGGACTTCTCTGAGG+TGG | 0.648118 | 7_2:-82624049 | None:intergenic |
| AAATTGTTTCCACCATAGGG+AGG | 0.648306 | 7_2:-82625758 | None:intergenic |
| GCGAAGGGATAGAAATGGTG+TGG | 0.657806 | 7_2:-82622275 | None:intergenic |
| AATTCTTCTAGAGTATGAAG+TGG | 0.658102 | 7_2:-82624774 | None:intergenic |
| TCAGTAAATACTCTTCAGGA+CGG | 0.664329 | 7_2:-82624400 | None:intergenic |
| GCACTTATAGGAATGACGGG+TGG | 0.665483 | 7_2:+82624694 | Msa1082540:CDS |
| TGAATCTGGACATTTCACTC+AGG | 0.665910 | 7_2:+82622638 | Msa1082540:CDS |
| TGCTGTGCATAAGATTAGAG+AGG | 0.673202 | 7_2:+82623949 | Msa1082540:CDS |
| AGAGATCTCATTCTGCACCA+CGG | 0.677131 | 7_2:+82624098 | Msa1082540:CDS |
| TATGGCAATAGTGCATCTAG+AGG | 0.677224 | 7_2:+82624585 | Msa1082540:CDS |
| CAAATGTCTCCTGGATACCG+GGG | 0.678032 | 7_2:+82625689 | Msa1082540:CDS |
| AAATCCACAAGAACACACAT+GGG | 0.684863 | 7_2:-82626591 | None:intergenic |
| GGTGGTGACCTTGATCGGTG+AGG | 0.695267 | 7_2:-82624028 | None:intergenic |
| GACCTATACAAAGAGTACAC+TGG | 0.695798 | 7_2:+82622399 | Msa1082540:CDS |
| AATGGACAAAGTCATAACAT+GGG | 0.697735 | 7_2:+82624672 | Msa1082540:CDS |
| TTCTTCTAGAGTATGAAGTG+GGG | 0.701789 | 7_2:-82624772 | None:intergenic |
| GAATTAACAGGACTTCTCTG+AGG | 0.710369 | 7_2:-82624052 | None:intergenic |
| AATTCACCAAAATTACCATG+AGG | 0.715488 | 7_2:-82625836 | None:intergenic |
| AAGGGATAGAAATGGTGTGG+TGG | 0.721146 | 7_2:-82622272 | None:intergenic |
| GGTGCAGAATGAGATCTCTG+AGG | 0.729093 | 7_2:-82624094 | None:intergenic |
| GGAAACTGAGGTGTATTCCG+TGG | 0.758876 | 7_2:-82624115 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAGAATTACAAAAAA+CGG | - | chr7_2:82625529-82625548 | None:intergenic | 10.0% |
| !!! | GATAAAAAGAATTTTAATAT+CGG | - | chr7_2:82625895-82625914 | None:intergenic | 10.0% |
| !! | TATTATTGTACTTACAATTT+AGG | + | chr7_2:82623724-82623743 | Msa1082540:intron | 15.0% |
| !! | ATTATTGTACTTACAATTTA+GGG | + | chr7_2:82623725-82623744 | Msa1082540:intron | 15.0% |
| !! | AACTCTTATAATTCATTTAA+TGG | + | chr7_2:82624654-82624673 | Msa1082540:CDS | 15.0% |
| !!! | TTAAAATTCTTTTTATCAAG+TGG | + | chr7_2:82625898-82625917 | Msa1082540:exon | 15.0% |
| !! | AAATAAAAAATTAGTAGGTT+TGG | - | chr7_2:82625949-82625968 | None:intergenic | 15.0% |
| !!! | AAATTTTGTTCAAAATCTTT+TGG | + | chr7_2:82625973-82625992 | Msa1082540:intron | 15.0% |
| !!! | GAAATGATTTGTAAATTATG+TGG | + | chr7_2:82622615-82622634 | Msa1082540:CDS | 20.0% |
| !! | TAATTTCTACAAGATATCTT+AGG | + | chr7_2:82622948-82622967 | Msa1082540:intron | 20.0% |
| !! | AAGGTATACTGAAAAATTTA+TGG | - | chr7_2:82623179-82623198 | None:intergenic | 20.0% |
| !!! | AGTTATAAGCTATTTTAGTA+AGG | - | chr7_2:82623198-82623217 | None:intergenic | 20.0% |
| !! | AGAATATTATTAATCAGCTA+AGG | - | chr7_2:82623328-82623347 | None:intergenic | 20.0% |
| !! | ATATCGTACTTGAAAATTTA+GGG | + | chr7_2:82623371-82623390 | Msa1082540:intron | 20.0% |
| !! | ATAATATCAGTCAACTAAAA+CGG | - | chr7_2:82623710-82623729 | None:intergenic | 20.0% |
| !! | AATCTTACTTATAACTTTCT+CGG | - | chr7_2:82623840-82623859 | None:intergenic | 20.0% |
| !! | AAGTTATAAGTAAGATTGAA+AGG | + | chr7_2:82623843-82623862 | Msa1082540:CDS | 20.0% |
| !! | AGTTATAAGTAAGATTGAAA+GGG | + | chr7_2:82623844-82623863 | Msa1082540:CDS | 20.0% |
| !! | TTAAAGAAAATCATCTATGT+TGG | + | chr7_2:82624517-82624536 | Msa1082540:intron | 20.0% |
| !! | ATTAGAGTTAGAGTATAAAA+AGG | + | chr7_2:82624794-82624813 | Msa1082540:CDS | 20.0% |
| !!! | AAAACAAATGATTGTTGTTT+AGG | - | chr7_2:82624927-82624946 | None:intergenic | 20.0% |
| !! | TGTGAATTAGTAGAAAAATA+TGG | + | chr7_2:82625434-82625453 | Msa1082540:intron | 20.0% |
| !! | AATAATGTATATTGTCAAAC+AGG | + | chr7_2:82625474-82625493 | Msa1082540:intron | 20.0% |
| !!! | ATATTTTGTTTATTGCTTGA+AGG | + | chr7_2:82625544-82625563 | Msa1082540:intron | 20.0% |
| !!! | TAAGTATGTTGATTAATCTT+AGG | + | chr7_2:82626349-82626368 | Msa1082540:three_prime_UTR | 20.0% |
| !! | AATTCTGTCATTTGTATTAC+AGG | + | chr7_2:82622668-82622687 | Msa1082540:intron | 25.0% |
| !!! | CTTGTTTTTGATAAGCTTAT+TGG | - | chr7_2:82622981-82623000 | None:intergenic | 25.0% |
| ! | GATATCGTACTTGAAAATTT+AGG | + | chr7_2:82623370-82623389 | Msa1082540:intron | 25.0% |
| ! | CTCAAATAAATAACTTAGTC+AGG | - | chr7_2:82623436-82623455 | None:intergenic | 25.0% |
| ! | AGTCTCAAGAATTATTTCAA+AGG | + | chr7_2:82623777-82623796 | Msa1082540:CDS | 25.0% |
| ! | GAGAAATTCATTATTGTTAG+TGG | + | chr7_2:82623893-82623912 | Msa1082540:CDS | 25.0% |
| ! | ATTCATTATTGTTAGTGGTA+AGG | + | chr7_2:82623898-82623917 | Msa1082540:CDS | 25.0% |
| !! | AGAAAATTTAAAACATCGTG+AGG | + | chr7_2:82624860-82624879 | Msa1082540:CDS | 25.0% |
| !! | ATACTAAAACCTGTCTTTTT+AGG | + | chr7_2:82624978-82624997 | Msa1082540:intron | 25.0% |
| !! | TGATTTTCTTTTGTCAGTTA+TGG | + | chr7_2:82625045-82625064 | Msa1082540:intron | 25.0% |
| !!! | TAGTAGACAAGTTTTAATGA+AGG | + | chr7_2:82625068-82625087 | Msa1082540:intron | 25.0% |
| !!! | AGTAGACAAGTTTTAATGAA+GGG | + | chr7_2:82625069-82625088 | Msa1082540:intron | 25.0% |
| !!! | AGTTCTGAGTAATTATAACT+AGG | - | chr7_2:82625097-82625116 | None:intergenic | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | - | chr7_2:82625313-82625332 | None:intergenic | 25.0% |
| ! | AATATCATGTAAGATGTTGT+TGG | - | chr7_2:82625405-82625424 | None:intergenic | 25.0% |
| !! | CTATAAACAGCAAAATTTTG+CGG | + | chr7_2:82625712-82625731 | Msa1082540:CDS | 25.0% |
| !!! | TCCTTTTAACTGTAAATATG+AGG | + | chr7_2:82625997-82626016 | Msa1082540:intron | 25.0% |
| ! | TCCTCATATTTACAGTTAAA+AGG | - | chr7_2:82626001-82626020 | None:intergenic | 25.0% |
| ! | ATCAACAATATCACAGAATA+CGG | - | chr7_2:82626133-82626152 | None:intergenic | 25.0% |
| !! | ATGTTGATTAATCTTAGGAT+TGG | + | chr7_2:82626354-82626373 | Msa1082540:three_prime_UTR | 25.0% |
| !! | TGTTGATTAATCTTAGGATT+GGG | + | chr7_2:82626355-82626374 | Msa1082540:three_prime_UTR | 25.0% |
| !! | ATCCAGTTTCTTGTTTAATA+TGG | + | chr7_2:82626403-82626422 | Msa1082540:three_prime_UTR | 25.0% |
| ! | AACCATATTAAACAAGAAAC+TGG | - | chr7_2:82626408-82626427 | None:intergenic | 25.0% |
| !!! | TGGAAGTAGTTTTATGTAAG+TGG | - | chr7_2:82622306-82622325 | None:intergenic | 30.0% |
| TGTAAATTATGTGGTGAATC+TGG | + | chr7_2:82622624-82622643 | Msa1082540:CDS | 30.0% | |
| !!! | GTTTAAGTGTCATTTTACTC+AGG | + | chr7_2:82622727-82622746 | Msa1082540:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr7_2:82622867-82622886 | Msa1082540:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr7_2:82622868-82622887 | Msa1082540:intron | 30.0% |
| ACTAACCTATTTATCCAAAC+AGG | + | chr7_2:82623073-82623092 | Msa1082540:intron | 30.0% | |
| CTAACCTATTTATCCAAACA+GGG | + | chr7_2:82623074-82623093 | Msa1082540:intron | 30.0% | |
| TAATCAGCTAAGGACTTATT+TGG | - | chr7_2:82623318-82623337 | None:intergenic | 30.0% | |
| ! | TATCATACTCAAAGGGTATA+TGG | - | chr7_2:82623401-82623420 | None:intergenic | 30.0% |
| ATGCGATTATCATACTCAAA+GGG | - | chr7_2:82623408-82623427 | None:intergenic | 30.0% | |
| AATGCGATTATCATACTCAA+AGG | - | chr7_2:82623409-82623428 | None:intergenic | 30.0% | |
| CAATCAACTAAGATCTTGTT+CGG | - | chr7_2:82623670-82623689 | None:intergenic | 30.0% | |
| TTATTGTTAGTGGTAAGGAT+AGG | + | chr7_2:82623903-82623922 | Msa1082540:CDS | 30.0% | |
| TTTCATGATTGTAGCTTGAT+AGG | + | chr7_2:82624269-82624288 | Msa1082540:intron | 30.0% | |
| !!! | TGTAGCTTGATAGGTTTTTT+TGG | + | chr7_2:82624278-82624297 | Msa1082540:intron | 30.0% |
| !!! | GTAGCTTGATAGGTTTTTTT+GGG | + | chr7_2:82624279-82624298 | Msa1082540:intron | 30.0% |
| ! | AGAGTATTTACTGAAAGGAT+TGG | + | chr7_2:82624409-82624428 | Msa1082540:intron | 30.0% |
| ! | TATGTTAAAGCACTTGAATC+AGG | - | chr7_2:82624546-82624565 | None:intergenic | 30.0% |
| ! | TAATGGACAAAGTCATAACA+TGG | + | chr7_2:82624671-82624690 | Msa1082540:CDS | 30.0% |
| AATGGACAAAGTCATAACAT+GGG | + | chr7_2:82624672-82624691 | Msa1082540:CDS | 30.0% | |
| !! | ATTCTTCTAGAGTATGAAGT+GGG | - | chr7_2:82624776-82624795 | None:intergenic | 30.0% |
| !! | AATTCTTCTAGAGTATGAAG+TGG | - | chr7_2:82624777-82624796 | None:intergenic | 30.0% |
| AGAGTTAGAGTATAAAAAGG+AGG | + | chr7_2:82624797-82624816 | Msa1082540:CDS | 30.0% | |
| !! | TCTTTTTAGGCATTAAGTCA+AGG | + | chr7_2:82624991-82625010 | Msa1082540:intron | 30.0% |
| GACAAAAGAAAATCAGCATA+GGG | - | chr7_2:82625040-82625059 | None:intergenic | 30.0% | |
| TGACAAAAGAAAATCAGCAT+AGG | - | chr7_2:82625041-82625060 | None:intergenic | 30.0% | |
| !! | AAAATTTTGCGGACTATGAT+AGG | + | chr7_2:82625723-82625742 | Msa1082540:CDS | 30.0% |
| AATTCACCAAAATTACCATG+AGG | - | chr7_2:82625839-82625858 | None:intergenic | 30.0% | |
| TGCTTTAGTAAAATGAGACA+AGG | - | chr7_2:82626027-82626046 | None:intergenic | 30.0% | |
| ! | TTCTGCTCGATAAAATTTTC+AGG | + | chr7_2:82626276-82626295 | Msa1082540:intron | 30.0% |
| ! | TCTGCTCGATAAAATTTTCA+GGG | + | chr7_2:82626277-82626296 | Msa1082540:intron | 30.0% |
| AACATACTTACCTACCTTAT+GGG | - | chr7_2:82626339-82626358 | None:intergenic | 30.0% | |
| ATTAATCTTAGGATTGGGAA+GGG | + | chr7_2:82626360-82626379 | Msa1082540:three_prime_UTR | 30.0% | |
| AATATCATTGAACAAGTCAC+CGG | - | chr7_2:82626488-82626507 | None:intergenic | 30.0% | |
| ! | GACTTGTTCAATGATATTTG+TGG | + | chr7_2:82626490-82626509 | Msa1082540:three_prime_UTR | 30.0% |
| AAAATCAACCAGTCATTCAT+AGG | - | chr7_2:82626520-82626539 | None:intergenic | 30.0% | |
| ! | GTGATTACACGTCAGTTTTA+GGG | - | chr7_2:82622232-82622251 | None:intergenic | 35.0% |
| ! | AGTGATTACACGTCAGTTTT+AGG | - | chr7_2:82622233-82622252 | None:intergenic | 35.0% |
| AAAATTCTCTCCGTCGATAT+CGG | - | chr7_2:82622332-82622351 | None:intergenic | 35.0% | |
| CTAAAATCGTCGTCAATATC+TGG | - | chr7_2:82622378-82622397 | None:intergenic | 35.0% | |
| AGAGAGCAAAATCGAACAAA+AGG | + | chr7_2:82622448-82622467 | Msa1082540:CDS | 35.0% | |
| AAACCAGTTGGAATAGCATT+AGG | - | chr7_2:82622519-82622538 | None:intergenic | 35.0% | |
| TTTGTATTACAGGCTCTGTT+TGG | + | chr7_2:82622678-82622697 | Msa1082540:intron | 35.0% | |
| ! | TCATTTTACTCAGGTATCAC+TGG | + | chr7_2:82622736-82622755 | Msa1082540:intron | 35.0% |
| !! | ATATCGACTTAGAGCATGTT+TGG | + | chr7_2:82622816-82622835 | Msa1082540:intron | 35.0% |
| TCTCACAAAACTTATGCTAC+TGG | - | chr7_2:82622862-82622881 | None:intergenic | 35.0% | |
| AAAGCCCTGTTTGGATAAAT+AGG | - | chr7_2:82623081-82623100 | None:intergenic | 35.0% | |
| AACTCAAATAAAGCCCTGTT+TGG | - | chr7_2:82623090-82623109 | None:intergenic | 35.0% | |
| ATACCTTGTGGGATAGATTA+AGG | + | chr7_2:82623482-82623501 | Msa1082540:intron | 35.0% | |
| TACCTTGTGGGATAGATTAA+GGG | + | chr7_2:82623483-82623502 | Msa1082540:intron | 35.0% | |
| TTAAGGGAATAGCTTATGAC+AGG | + | chr7_2:82623499-82623518 | Msa1082540:intron | 35.0% | |
| AGTAAGATTGAAAGGGACAT+TGG | + | chr7_2:82623851-82623870 | Msa1082540:CDS | 35.0% | |
| ! | CATTGGCTGCAAAATTAAGA+TGG | + | chr7_2:82623868-82623887 | Msa1082540:CDS | 35.0% |
| ! | TGGTAAGGATAGGTTAGTTA+TGG | + | chr7_2:82623913-82623932 | Msa1082540:CDS | 35.0% |
| ! | GATAGGTTAGTTATGGCTAA+AGG | + | chr7_2:82623920-82623939 | Msa1082540:CDS | 35.0% |
| TTTGCAAGAGATTCTCAACA+AGG | + | chr7_2:82624199-82624218 | Msa1082540:CDS | 35.0% | |
| AAGAGATTCTCAACAAGGTA+GGG | + | chr7_2:82624204-82624223 | Msa1082540:intron | 35.0% | |
| AATTACCAGCTTTCTAACGA+TGG | - | chr7_2:82624251-82624270 | None:intergenic | 35.0% | |
| TCAGTAAATACTCTTCAGGA+CGG | - | chr7_2:82624403-82624422 | None:intergenic | 35.0% | |
| CCTTTCAGTAAATACTCTTC+AGG | - | chr7_2:82624407-82624426 | None:intergenic | 35.0% | |
| !! | CCTGAAGAGTATTTACTGAA+AGG | + | chr7_2:82624404-82624423 | Msa1082540:intron | 35.0% |
| TATTCGCATACTGAAACCAT+TGG | - | chr7_2:82624437-82624456 | None:intergenic | 35.0% | |
| TCTTCATTTCGTGAAGCTTA+TGG | + | chr7_2:82624567-82624586 | Msa1082540:CDS | 35.0% | |
| !! | TTCTTCTAGAGTATGAAGTG+GGG | - | chr7_2:82624775-82624794 | None:intergenic | 35.0% |
| AGAGTATAAAAAGGAGGCAA+TGG | + | chr7_2:82624803-82624822 | Msa1082540:CDS | 35.0% | |
| GACTTAATGCCTAAAAAGAC+AGG | - | chr7_2:82624990-82625009 | None:intergenic | 35.0% | |
| TGTAACAGTGAAATGCTCTT+GGG | - | chr7_2:82625238-82625257 | None:intergenic | 35.0% | |
| TTGTAACAGTGAAATGCTCT+TGG | - | chr7_2:82625239-82625258 | None:intergenic | 35.0% | |
| TCAACTAGGTCATCTATTGA+GGG | - | chr7_2:82625276-82625295 | None:intergenic | 35.0% | |
| ! | ATATGCATTGGTATGTGTGT+CGG | - | chr7_2:82625301-82625320 | None:intergenic | 35.0% |
| TCAAACAGGTCATCTATTGA+GGG | + | chr7_2:82625488-82625507 | Msa1082540:intron | 35.0% | |
| TTCCACGCATACAAAACAAT+GGG | + | chr7_2:82625616-82625635 | Msa1082540:CDS | 35.0% | |
| !!! | AATTTTGCTGTTTATAGCCC+CGG | - | chr7_2:82625709-82625728 | None:intergenic | 35.0% |
| GGTAAATTGTTTCCACCATA+GGG | - | chr7_2:82625764-82625783 | None:intergenic | 35.0% | |
| AGGTAAATTGTTTCCACCAT+AGG | - | chr7_2:82625765-82625784 | None:intergenic | 35.0% | |
| TGGTGGAAACAATTTACCTT+TGG | + | chr7_2:82625766-82625785 | Msa1082540:CDS | 35.0% | |
| !! | ACAATTTACCTTTGGAGTCA+CGG | + | chr7_2:82625774-82625793 | Msa1082540:CDS | 35.0% |
| GAATAGGTTCTCAAACAGTA+TGG | + | chr7_2:82625796-82625815 | Msa1082540:CDS | 35.0% | |
| ATTCATTTAGTAGCCGATAC+TGG | + | chr7_2:82626099-82626118 | Msa1082540:intron | 35.0% | |
| GTTGATGTTGTCACATAGAA+AGG | + | chr7_2:82626147-82626166 | Msa1082540:intron | 35.0% | |
| TTGTACTATAGTTGACCAAC+AGG | + | chr7_2:82626189-82626208 | Msa1082540:intron | 35.0% | |
| TGTACTATAGTTGACCAACA+GGG | + | chr7_2:82626190-82626209 | Msa1082540:intron | 35.0% | |
| ATCGAGCAGAATTAAAGCTA+TGG | - | chr7_2:82626267-82626286 | None:intergenic | 35.0% | |
| TAAATGAACAAGAGCCCATA+AGG | + | chr7_2:82626322-82626341 | Msa1082540:three_prime_UTR | 35.0% | |
| CAACATACTTACCTACCTTA+TGG | - | chr7_2:82626340-82626359 | None:intergenic | 35.0% | |
| GATTAATCTTAGGATTGGGA+AGG | + | chr7_2:82626359-82626378 | Msa1082540:three_prime_UTR | 35.0% | |
| CATTGTTTACCATCCATTAC+CGG | + | chr7_2:82626466-82626485 | Msa1082540:three_prime_UTR | 35.0% | |
| ! | TGCTTTGTTACAATCAATCC+AGG | + | chr7_2:82626556-82626575 | Msa1082540:three_prime_UTR | 35.0% |
| AAATCCACAAGAACACACAT+GGG | - | chr7_2:82626594-82626613 | None:intergenic | 35.0% | |
| AAAATCCACAAGAACACACA+TGG | - | chr7_2:82626595-82626614 | None:intergenic | 35.0% | |
| !!! | CTTGTGGATTTTTTACGCAT+AGG | + | chr7_2:82626603-82626622 | Msa1082540:three_prime_UTR | 35.0% |
| TGCATAGACAGAAATGTTAC+TGG | - | chr7_2:82626636-82626655 | None:intergenic | 35.0% | |
| AACAAGCGAAGGGATAGAAA+TGG | - | chr7_2:82622283-82622302 | None:intergenic | 40.0% | |
| ATGTAAGTGGAACAAGCGAA+GGG | - | chr7_2:82622293-82622312 | None:intergenic | 40.0% | |
| TATGTAAGTGGAACAAGCGA+AGG | - | chr7_2:82622294-82622313 | None:intergenic | 40.0% | |
| ! | ACGGAGAGAATTTTCATCCA+TGG | + | chr7_2:82622338-82622357 | Msa1082540:exon | 40.0% |
| ATCGTCGTCAATATCTGGAT+CGG | - | chr7_2:82622373-82622392 | None:intergenic | 40.0% | |
| ! | GACCTATACAAAGAGTACAC+TGG | + | chr7_2:82622399-82622418 | Msa1082540:CDS | 40.0% |
| GACCAGTGTACTCTTTGTAT+AGG | - | chr7_2:82622404-82622423 | None:intergenic | 40.0% | |
| TCGAACAAAAGGTCAAATGC+AGG | + | chr7_2:82622459-82622478 | Msa1082540:CDS | 40.0% | |
| GATCCTAATGCTATTCCAAC+TGG | + | chr7_2:82622513-82622532 | Msa1082540:CDS | 40.0% | |
| TTTCATAAGCCGTGATGCTA+AGG | + | chr7_2:82622536-82622555 | Msa1082540:CDS | 40.0% | |
| CCAATTTCTCTCAGTAGCTT+TGG | - | chr7_2:82622577-82622596 | None:intergenic | 40.0% | |
| CCAAAGCTACTGAGAGAAAT+TGG | + | chr7_2:82622574-82622593 | Msa1082540:CDS | 40.0% | |
| TGAATCTGGACATTTCACTC+AGG | + | chr7_2:82622638-82622657 | Msa1082540:CDS | 40.0% | |
| !!! | TACTCAGGTATCACTGGTTT+TGG | + | chr7_2:82622742-82622761 | Msa1082540:intron | 40.0% |
| GACTTAGAGCATGTTTGGAT+TGG | + | chr7_2:82622821-82622840 | Msa1082540:intron | 40.0% | |
| !! | ACACCTTTTGGGAGATCTTA+CGG | + | chr7_2:82623135-82623154 | Msa1082540:intron | 40.0% |
| TTTCCGTAAGATCTCCCAAA+AGG | - | chr7_2:82623141-82623160 | None:intergenic | 40.0% | |
| TTTCATCGCCATCTTAGTTG+AGG | + | chr7_2:82623347-82623366 | Msa1082540:intron | 40.0% | |
| TTCATCGCCATCTTAGTTGA+GGG | + | chr7_2:82623348-82623367 | Msa1082540:intron | 40.0% | |
| ACGATATCCCTCAACTAAGA+TGG | - | chr7_2:82623358-82623377 | None:intergenic | 40.0% | |
| TAAGCGCTTGTAATACCTTG+TGG | + | chr7_2:82623470-82623489 | Msa1082540:intron | 40.0% | |
| AAGCGCTTGTAATACCTTGT+GGG | + | chr7_2:82623471-82623490 | Msa1082540:intron | 40.0% | |
| TTCCCTTAATCTATCCCACA+AGG | - | chr7_2:82623488-82623507 | None:intergenic | 40.0% | |
| TTGTTTGCTCCAAGAGTAGA+TGG | - | chr7_2:82623755-82623774 | None:intergenic | 40.0% | |
| CTTACATTTCTGTCTCTTGC+AGG | - | chr7_2:82623806-82623825 | None:intergenic | 40.0% | |
| TGCTGTGCATAAGATTAGAG+AGG | + | chr7_2:82623949-82623968 | Msa1082540:CDS | 40.0% | |
| GTGCATAAGATTAGAGAGGA+AGG | + | chr7_2:82623953-82623972 | Msa1082540:CDS | 40.0% | |
| TAGAGAGGAAGGTGAACAAA+AGG | + | chr7_2:82623964-82623983 | Msa1082540:CDS | 40.0% | |
| AGAGAGGAAGGTGAACAAAA+GGG | + | chr7_2:82623965-82623984 | Msa1082540:CDS | 40.0% | |
| TGATCGGTTAATCTGAGAAC+TGG | - | chr7_2:82623996-82624015 | None:intergenic | 40.0% | |
| GTTCTCAGATTAACCGATCA+AGG | + | chr7_2:82623996-82624015 | Msa1082540:CDS | 40.0% | |
| GAATTAACAGGACTTCTCTG+AGG | - | chr7_2:82624055-82624074 | None:intergenic | 40.0% | |
| AGAGAAGTCCTGTTAATTCC+AGG | + | chr7_2:82624056-82624075 | Msa1082540:CDS | 40.0% | |
| ATACACCTCAGTTTCCTCAA+AGG | + | chr7_2:82624122-82624141 | Msa1082540:CDS | 40.0% | |
| CAAGAGATTCTCAACAAGGT+AGG | + | chr7_2:82624203-82624222 | Msa1082540:intron | 40.0% | |
| TTATGCCATCGTTAGAAAGC+TGG | + | chr7_2:82624243-82624262 | Msa1082540:intron | 40.0% | |
| ! | TGTCATTTACTTGCAGCAAG+AGG | + | chr7_2:82624350-82624369 | Msa1082540:intron | 40.0% |
| AGGACGGAGATAATTGTTGA+AGG | - | chr7_2:82624387-82624406 | None:intergenic | 40.0% | |
| TATGGCAATAGTGCATCTAG+AGG | + | chr7_2:82624585-82624604 | Msa1082540:CDS | 40.0% | |
| !!! | GAGATTTTGACTGGCTTGAA+CGG | - | chr7_2:82624611-82624630 | None:intergenic | 40.0% |
| !! | CTTGTCTTGGAGATTTTGAC+TGG | - | chr7_2:82624620-82624639 | None:intergenic | 40.0% |
| ATAAGAGTTCCCTGTATGTG+AGG | - | chr7_2:82624643-82624662 | None:intergenic | 40.0% | |
| GTCATAACATGGGCACTTAT+AGG | + | chr7_2:82624682-82624701 | Msa1082540:CDS | 40.0% | |
| ATGGGCACTTATAGGAATGA+CGG | + | chr7_2:82624690-82624709 | Msa1082540:CDS | 40.0% | |
| GATTCTCATAGGAGAGAATC+TGG | + | chr7_2:82624717-82624736 | Msa1082540:CDS | 40.0% | |
| ! | TCCTCTGTTTTACTGTGACT+TGG | + | chr7_2:82625120-82625139 | Msa1082540:intron | 40.0% |
| GTCAACTAGGTCATCTATTG+AGG | - | chr7_2:82625277-82625296 | None:intergenic | 40.0% | |
| GTCAAACAGGTCATCTATTG+AGG | + | chr7_2:82625487-82625506 | Msa1082540:intron | 40.0% | |
| GTTCCACGCATACAAAACAA+TGG | + | chr7_2:82625615-82625634 | Msa1082540:CDS | 40.0% | |
| !! | TTCCCATTGTTTTGTATGCG+TGG | - | chr7_2:82625621-82625640 | None:intergenic | 40.0% |
| AACAAATGTCTCCTGGATAC+CGG | + | chr7_2:82625687-82625706 | Msa1082540:CDS | 40.0% | |
| AAATTGTTTCCACCATAGGG+AGG | - | chr7_2:82625761-82625780 | None:intergenic | 40.0% | |
| ! | AAATTACCATGAGGCCTTGT+AGG | - | chr7_2:82625830-82625849 | None:intergenic | 40.0% |
| ! | ACAAGGCCTCATGGTAATTT+TGG | + | chr7_2:82625830-82625849 | Msa1082540:CDS | 40.0% |
| TTTGGTGAATTTCAGAGACG+TGG | + | chr7_2:82625848-82625867 | Msa1082540:CDS | 40.0% | |
| ATTAGTAGGTTTGGAAGACG+AGG | - | chr7_2:82625940-82625959 | None:intergenic | 40.0% | |
| GAAATAACAACCCAACCTTG+AGG | - | chr7_2:82626074-82626093 | None:intergenic | 40.0% | |
| ACAAACTACAATGTCCCTGT+TGG | - | chr7_2:82626207-82626226 | None:intergenic | 40.0% | |
| TAACACCTACTCGATCAATC+TGG | - | chr7_2:82626304-82626323 | None:intergenic | 40.0% | |
| ATTGAACAAGTCACCGGTAA+TGG | - | chr7_2:82626482-82626501 | None:intergenic | 40.0% | |
| ACAATCAATCCAGGTGTTTG+AGG | + | chr7_2:82626565-82626584 | Msa1082540:three_prime_UTR | 40.0% | |
| AAGGGATAGAAATGGTGTGG+TGG | - | chr7_2:82622275-82622294 | None:intergenic | 45.0% | |
| TCGTCGTCAATATCTGGATC+GGG | - | chr7_2:82622372-82622391 | None:intergenic | 45.0% | |
| ! | AAAGAGTACACTGGTCCTGT+AGG | + | chr7_2:82622408-82622427 | Msa1082540:CDS | 45.0% |
| TGCTCTCTCTTGAACAGATC+CGG | - | chr7_2:82622436-82622455 | None:intergenic | 45.0% | |
| TCACGGCTTATGAAACCAGT+TGG | - | chr7_2:82622531-82622550 | None:intergenic | 45.0% | |
| ! | ATGCACTCTGTCACACCTTT+TGG | + | chr7_2:82623123-82623142 | Msa1082540:intron | 45.0% |
| ! | TGCACTCTGTCACACCTTTT+GGG | + | chr7_2:82623124-82623143 | Msa1082540:intron | 45.0% |
| TAGGGTTGTCCATCTACTCT+TGG | + | chr7_2:82623743-82623762 | Msa1082540:intron | 45.0% | |
| ! | TTAACAGGACTTCTCTGAGG+TGG | - | chr7_2:82624052-82624071 | None:intergenic | 45.0% |
| CGCTGAAACCTGGAATTAAC+AGG | - | chr7_2:82624067-82624086 | None:intergenic | 45.0% | |
| AGAGATCTCATTCTGCACCA+CGG | + | chr7_2:82624098-82624117 | Msa1082540:CDS | 45.0% | |
| ! | CCAAACCTTTGAGGAAACTG+AGG | - | chr7_2:82624130-82624149 | None:intergenic | 45.0% |
| CCTCAGTTTCCTCAAAGGTT+TGG | + | chr7_2:82624127-82624146 | Msa1082540:CDS | 45.0% | |
| AGTTTCCTCAAAGGTTTGGC+AGG | + | chr7_2:82624131-82624150 | Msa1082540:CDS | 45.0% | |
| !! | ACTGAAAGGATTGGCTCCAA+TGG | + | chr7_2:82624418-82624437 | Msa1082540:intron | 45.0% |
| CAAGACAAGCCTCACATACA+GGG | + | chr7_2:82624631-82624650 | Msa1082540:CDS | 45.0% | |
| TGGGCACTTATAGGAATGAC+GGG | + | chr7_2:82624691-82624710 | Msa1082540:CDS | 45.0% | |
| !! | CACTTATAGGAATGACGGGT+GGG | + | chr7_2:82624695-82624714 | Msa1082540:CDS | 45.0% |
| !! | TTGTGATCAAAGTGTTGGCC+AGG | - | chr7_2:82624750-82624769 | None:intergenic | 45.0% |
| ! | GGGCATTGTGATCAAAGTGT+TGG | - | chr7_2:82624755-82624774 | None:intergenic | 45.0% |
| GCCAAGTCACAGTAAAACAG+AGG | - | chr7_2:82625124-82625143 | None:intergenic | 45.0% | |
| CTAGGTCATCTATTGAGGGA+CGG | - | chr7_2:82625272-82625291 | None:intergenic | 45.0% | |
| TATGTGTGTCGGAGTCAACT+AGG | - | chr7_2:82625290-82625309 | None:intergenic | 45.0% | |
| ACAGGTCATCTATTGAGGGA+CGG | + | chr7_2:82625492-82625511 | Msa1082540:intron | 45.0% | |
| !! | TTTTTCAGCTTGATGCCCAG+AGG | + | chr7_2:82625645-82625664 | Msa1082540:CDS | 45.0% |
| GCAATCCAACAAATGTCTCC+TGG | + | chr7_2:82625680-82625699 | Msa1082540:CDS | 45.0% | |
| GGTATCCAGGAGACATTTGT+TGG | - | chr7_2:82625688-82625707 | None:intergenic | 45.0% | |
| ACAAATGTCTCCTGGATACC+GGG | + | chr7_2:82625688-82625707 | Msa1082540:CDS | 45.0% | |
| !! | TACCTTTGGAGTCACGGAAT+AGG | + | chr7_2:82625780-82625799 | Msa1082540:CDS | 45.0% |
| AACCTATTCCGTGACTCCAA+AGG | - | chr7_2:82625785-82625804 | None:intergenic | 45.0% | |
| ! | GTATGGAGCCTTATCCTACA+AGG | + | chr7_2:82625813-82625832 | Msa1082540:CDS | 45.0% |
| ! | AGATAACTTGCCTTGCCTCA+AGG | + | chr7_2:82626056-82626075 | Msa1082540:intron | 45.0% |
| TGAACAAGAGCCCATAAGGT+AGG | + | chr7_2:82626326-82626345 | Msa1082540:three_prime_UTR | 45.0% | |
| !! | AACAAGTCACCGGTAATGGA+TGG | - | chr7_2:82626478-82626497 | None:intergenic | 45.0% |
| GTGGAGATCCTATGAATGAC+TGG | + | chr7_2:82626509-82626528 | Msa1082540:three_prime_UTR | 45.0% | |
| !! | TTAAAAAATAAAAAATTAGT+AGG | - | chr7_2:82625954-82625973 | None:intergenic | 5.0% |
| GCGAAGGGATAGAAATGGTG+TGG | - | chr7_2:82622278-82622297 | None:intergenic | 50.0% | |
| ACTTCCATCGCCGATATCGA+CGG | + | chr7_2:82622319-82622338 | Msa1082540:five_prime_UTR | 50.0% | |
| TGGATCGGGAATATTCGCCA+TGG | - | chr7_2:82622358-82622377 | None:intergenic | 50.0% | |
| TACACTGGTCCTGTAGGATC+CGG | + | chr7_2:82622414-82622433 | Msa1082540:CDS | 50.0% | |
| TGAACAGATCCGGATCCTAC+AGG | - | chr7_2:82622426-82622445 | None:intergenic | 50.0% | |
| TAAGCCGTGATGCTAAGGTC+TGG | + | chr7_2:82622541-82622560 | Msa1082540:CDS | 50.0% | |
| AAGCCGTGATGCTAAGGTCT+GGG | + | chr7_2:82622542-82622561 | Msa1082540:CDS | 50.0% | |
| CTTCCCAGACCTTAGCATCA+CGG | - | chr7_2:82622548-82622567 | None:intergenic | 50.0% | |
| GGTGCAGAATGAGATCTCTG+AGG | - | chr7_2:82624097-82624116 | None:intergenic | 50.0% | |
| GGAAACTGAGGTGTATTCCG+TGG | - | chr7_2:82624118-82624137 | None:intergenic | 50.0% | |
| TCTTGCCTGCCAAACCTTTG+AGG | - | chr7_2:82624139-82624158 | None:intergenic | 50.0% | |
| CAACAAGGTAGGGACAGCTT+AGG | + | chr7_2:82624214-82624233 | Msa1082540:intron | 50.0% | |
| CCTGTATGTGAGGCTTGTCT+TGG | - | chr7_2:82624633-82624652 | None:intergenic | 50.0% | |
| CCAAGACAAGCCTCACATAC+AGG | + | chr7_2:82624630-82624649 | Msa1082540:CDS | 50.0% | |
| ! | GCACTTATAGGAATGACGGG+TGG | + | chr7_2:82624694-82624713 | Msa1082540:CDS | 50.0% |
| !! | ATGACGGGTGGGATTCTCAT+AGG | + | chr7_2:82624706-82624725 | Msa1082540:CDS | 50.0% |
| AGAGAATCTGGCATCCAACC+TGG | + | chr7_2:82624729-82624748 | Msa1082540:CDS | 50.0% | |
| !! | GATCAAAGTGTTGGCCAGGT+TGG | - | chr7_2:82624746-82624765 | None:intergenic | 50.0% |
| ACATCGTGAGGTGCGTTCAT+TGG | + | chr7_2:82624872-82624891 | Msa1082540:intron | 50.0% | |
| GTCATCTATTGAGGGACGGA+GGG | - | chr7_2:82625496-82625515 | None:intergenic | 50.0% | |
| GTCATCTATTGAGGGACGGA+GGG | + | chr7_2:82625496-82625515 | Msa1082540:intron | 50.0% | |
| !! | TGCTTGTTGTTGACGCCTCT+GGG | - | chr7_2:82625663-82625682 | None:intergenic | 50.0% |
| !! | TTGCTTGTTGTTGACGCCTC+TGG | - | chr7_2:82625664-82625683 | None:intergenic | 50.0% |
| CAAATGTCTCCTGGATACCG+GGG | + | chr7_2:82625689-82625708 | Msa1082540:CDS | 50.0% | |
| TGTTTATAGCCCCGGTATCC+AGG | - | chr7_2:82625701-82625720 | None:intergenic | 50.0% | |
| TCTCCTGTCAATCCTCCCTA+TGG | + | chr7_2:82625746-82625765 | Msa1082540:CDS | 50.0% | |
| ! | CCATGAGGCCTTGTAGGATA+AGG | - | chr7_2:82625824-82625843 | None:intergenic | 50.0% |
| CCTTATCCTACAAGGCCTCA+TGG | + | chr7_2:82625821-82625840 | Msa1082540:CDS | 50.0% | |
| GTAGGTTTGGAAGACGAGGT+CGG | - | chr7_2:82625936-82625955 | None:intergenic | 50.0% | |
| AACTTGCCTTGCCTCAAGGT+TGG | + | chr7_2:82626060-82626079 | Msa1082540:intron | 50.0% | |
| ACTTGCCTTGCCTCAAGGTT+GGG | + | chr7_2:82626061-82626080 | Msa1082540:intron | 50.0% | |
| AACAACCCAACCTTGAGGCA+AGG | - | chr7_2:82626069-82626088 | None:intergenic | 50.0% | |
| AGGGTCCAGATTGATCGAGT+AGG | + | chr7_2:82626296-82626315 | Msa1082540:intron | 50.0% | |
| TTGGGAAGGGACATGCATTC+TGG | + | chr7_2:82626373-82626392 | Msa1082540:three_prime_UTR | 50.0% | |
| GCATCCCATGTGTGTTCTTG+TGG | + | chr7_2:82626587-82626606 | Msa1082540:three_prime_UTR | 50.0% | |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | - | chr7_2:82624012-82624031 | None:intergenic | 55.0% |
| ! | GAGGTGGTGGTGACCTTGAT+CGG | - | chr7_2:82624012-82624031 | None:intergenic | 55.0% |
| !! | ACAGGACTTCTCTGAGGTGG+TGG | - | chr7_2:82624049-82624068 | None:intergenic | 55.0% |
| GGTCATCTATTGAGGGACGG+AGG | - | chr7_2:82625495-82625514 | None:intergenic | 55.0% | |
| GGTCATCTATTGAGGGACGG+AGG | + | chr7_2:82625495-82625514 | Msa1082540:intron | 55.0% | |
| CCACCATAGGGAGGATTGAC+AGG | - | chr7_2:82625752-82625771 | None:intergenic | 55.0% | |
| CCTGTCAATCCTCCCTATGG+TGG | + | chr7_2:82625749-82625768 | Msa1082540:CDS | 55.0% | |
| TACGGCTCGACGACCAGTAT+CGG | - | chr7_2:82626115-82626134 | None:intergenic | 55.0% | |
| CATGGGATGCCTCAAACACC+TGG | - | chr7_2:82626577-82626596 | None:intergenic | 55.0% | |
| CTCTCCGTCGATATCGGCGA+TGG | - | chr7_2:82622326-82622345 | None:intergenic | 60.0% | |
| CACCACCACCTCACCGATCA+AGG | + | chr7_2:82624020-82624039 | Msa1082540:CDS | 60.0% | |
| GACCTTGATCGGTGAGGTGG+TGG | - | chr7_2:82624025-82624044 | None:intergenic | 60.0% | |
| GGTGACCTTGATCGGTGAGG+TGG | - | chr7_2:82624028-82624047 | None:intergenic | 60.0% | |
| GGTGGTGACCTTGATCGGTG+AGG | - | chr7_2:82624031-82624050 | None:intergenic | 60.0% | |
| !! | AGGCTCAGAGCGCTGAAACC+TGG | - | chr7_2:82624077-82624096 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82622222 | 82626679 | 82622222 | ID=Msa1082540;Name=Msa1082540 |
| chr7_2 | mRNA | 82622222 | 82626679 | 82622222 | ID=Msa1082540-mRNA-1;Parent=Msa1082540;Name=Msa1082540-mRNA-1;_AED=0.19;_eAED=0.19;_QI=135|0.8|0.5|1|0.8|0.66|6|400|495 |
| chr7_2 | exon | 82622222 | 82622659 | 82622222 | ID=Msa1082540-mRNA-1:exon:21454;Parent=Msa1082540-mRNA-1 |
| chr7_2 | exon | 82623746 | 82624220 | 82623746 | ID=Msa1082540-mRNA-1:exon:21455;Parent=Msa1082540-mRNA-1 |
| chr7_2 | exon | 82624366 | 82624411 | 82624366 | ID=Msa1082540-mRNA-1:exon:21456;Parent=Msa1082540-mRNA-1 |
| chr7_2 | exon | 82624554 | 82624881 | 82624554 | ID=Msa1082540-mRNA-1:exon:21457;Parent=Msa1082540-mRNA-1 |
| chr7_2 | exon | 82625566 | 82625919 | 82625566 | ID=Msa1082540-mRNA-1:exon:21458;Parent=Msa1082540-mRNA-1 |
| chr7_2 | exon | 82626298 | 82626679 | 82626298 | ID=Msa1082540-mRNA-1:exon:21459;Parent=Msa1082540-mRNA-1 |
| chr7_2 | five_prime_UTR | 82622222 | 82622356 | 82622222 | ID=Msa1082540-mRNA-1:five_prime_utr;Parent=Msa1082540-mRNA-1 |
| chr7_2 | CDS | 82622357 | 82622659 | 82622357 | ID=Msa1082540-mRNA-1:cds;Parent=Msa1082540-mRNA-1 |
| chr7_2 | CDS | 82623746 | 82624220 | 82623746 | ID=Msa1082540-mRNA-1:cds;Parent=Msa1082540-mRNA-1 |
| chr7_2 | CDS | 82624366 | 82624411 | 82624366 | ID=Msa1082540-mRNA-1:cds;Parent=Msa1082540-mRNA-1 |
| chr7_2 | CDS | 82624554 | 82624881 | 82624554 | ID=Msa1082540-mRNA-1:cds;Parent=Msa1082540-mRNA-1 |
| chr7_2 | CDS | 82625566 | 82625901 | 82625566 | ID=Msa1082540-mRNA-1:cds;Parent=Msa1082540-mRNA-1 |
| chr7_2 | three_prime_UTR | 82625902 | 82625919 | 82625902 | ID=Msa1082540-mRNA-1:three_prime_utr;Parent=Msa1082540-mRNA-1 |
| chr7_2 | three_prime_UTR | 82626298 | 82626679 | 82626298 | ID=Msa1082540-mRNA-1:three_prime_utr;Parent=Msa1082540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
