AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083070 MtrunA17_Chr7g0271241 86.978 407 22 10 1 402 1 381 0.0 634
Msa1083070 MtrunA17_Chr1g0193371 55.396 417 122 18 1 401 1 369 3.07e-121 356
Msa1083070 MtrunA17_Chr7g0270891 89.313 131 14 0 1 131 1 131 2.05e-84 261
Msa1083070 MtrunA17_Chr1g0193801 58.296 223 76 5 1 209 1 220 4.80e-84 261
Msa1083070 MtrunA17_Chr4g0058631 81.679 131 24 0 1 131 1 131 3.56e-77 243
Msa1083070 MtrunA17_Chr3g0117091 78.571 140 30 0 1 140 1 140 1.64e-76 241
Msa1083070 MtrunA17_Chr1g0211161 80.769 130 25 0 3 132 4 133 7.50e-74 230
Msa1083070 MtrunA17_Chr2g0330041 74.809 131 33 0 1 131 1 131 1.14e-68 222
Msa1083070 MtrunA17_Chr8g0342521 60.000 170 68 0 1 170 1 170 4.91e-67 216
Msa1083070 MtrunA17_Chr8g0342541 61.628 172 48 3 1 172 1 154 1.40e-66 215
Msa1083070 MtrunA17_Chr2g0309911 70.000 130 38 1 1 130 1 129 1.32e-64 209
Msa1083070 MtrunA17_Chr3g0131121 56.790 162 67 1 1 162 1 159 2.01e-62 202
Msa1083070 MtrunA17_Chr4g0039971 67.969 128 41 0 1 128 2 129 2.40e-62 204
Msa1083070 MtrunA17_Chr3g0115821 65.649 131 45 0 1 131 1 131 3.83e-62 203
Msa1083070 MtrunA17_Chr8g0385321 68.217 129 41 0 1 129 1 129 4.43e-62 202
Msa1083070 MtrunA17_Chr6g0453471 69.531 128 39 0 1 128 1 128 5.94e-62 203
Msa1083070 MtrunA17_Chr7g0217741 67.939 131 42 0 1 131 1 131 1.81e-61 201
Msa1083070 MtrunA17_Chr5g0434571 64.085 142 51 0 1 142 37 178 2.17e-61 202
Msa1083070 MtrunA17_Chr4g0037141 53.488 172 79 1 1 172 1 171 3.16e-61 199
Msa1083070 MtrunA17_Chr4g0042671 69.531 128 39 0 1 128 1 128 3.77e-61 202
Msa1083070 MtrunA17_Chr8g0342481 76.923 117 26 1 1 116 1 117 4.30e-61 202
Msa1083070 MtrunA17_Chr8g0387421 70.339 118 35 0 1 118 1 118 1.64e-60 198
Msa1083070 MtrunA17_Chr3g0110351 67.692 130 42 0 1 130 1 130 9.00e-60 196
Msa1083070 MtrunA17_Chr7g0228891 56.364 165 72 0 1 165 1 165 1.52e-59 194
Msa1083070 MtrunA17_Chr4g0032401 81.308 107 20 0 11 117 16 122 1.72e-59 196
Msa1083070 MtrunA17_Chr8g0349261 66.667 132 42 2 1 130 1 132 3.09e-59 194
Msa1083070 MtrunA17_Chr2g0328771 48.276 232 84 7 12 217 20 241 3.57e-59 195
Msa1083070 MtrunA17_Chr5g0410961 63.158 133 49 0 1 133 1 133 3.69e-59 196
Msa1083070 MtrunA17_Chr5g0435101 64.800 125 44 0 3 127 2 126 4.87e-59 191
Msa1083070 MtrunA17_Chr4g0057031 65.116 129 45 0 1 129 1 129 9.40e-59 192
Msa1083070 MtrunA17_Chr1g0203411 67.797 118 38 0 1 118 1 118 1.60e-58 192
Msa1083070 MtrunA17_Chr2g0281071 65.116 129 44 1 1 128 1 129 4.40e-58 193
Msa1083070 MtrunA17_Chr5g0397231 72.727 110 30 0 1 110 1 110 5.32e-58 192
Msa1083070 MtrunA17_Chr3g0103281 65.385 130 45 0 1 130 1 130 1.18e-57 191
Msa1083070 MtrunA17_Chr2g0323411 66.406 128 43 0 1 128 1 128 1.40e-57 191
Msa1083070 MtrunA17_Chr5g0395281 66.667 123 41 0 12 134 12 134 3.14e-57 189
Msa1083070 MtrunA17_Chr3g0088461 77.982 109 24 0 9 117 19 127 3.65e-57 191
Msa1083070 MtrunA17_Chr4g0048511 64.341 129 45 1 1 128 1 129 4.77e-57 191
Msa1083070 MtrunA17_Chr4g0044421 66.667 126 42 0 1 126 1 126 1.35e-56 184
Msa1083070 MtrunA17_Chr1g0187761 69.492 118 36 0 1 118 1 118 1.02e-55 184
Msa1083070 MtrunA17_Chr1g0203441 71.074 121 34 1 9 129 10 129 1.27e-55 184
Msa1083070 MtrunA17_Chr6g0452271 60.305 131 52 0 1 131 1 131 1.79e-55 186
Msa1083070 MtrunA17_Chr6g0470971 69.919 123 36 1 9 130 11 133 1.27e-54 182
Msa1083070 MtrunA17_Chr1g0167661 46.602 206 86 4 1 203 1 185 1.77e-54 181
Msa1083070 MtrunA17_Chr7g0274581 61.864 118 45 0 1 118 1 118 1.90e-52 174
Msa1083070 MtrunA17_Chr3g0121241 62.097 124 47 0 6 129 36 159 5.02e-52 176
Msa1083070 MtrunA17_Chr5g0417821 64.706 119 42 0 12 130 7 125 7.54e-52 175
Msa1083070 MtrunA17_Chr4g0070611 43.290 231 123 4 1 225 1 229 8.68e-52 175
Msa1083070 MtrunA17_Chr1g0167691 65.517 116 40 0 1 116 1 116 1.04e-51 173
Msa1083070 MtrunA17_Chr7g0261281 63.559 118 43 0 1 118 1 118 2.88e-51 173
Msa1083070 MtrunA17_Chr2g0323351 55.245 143 62 1 1 143 1 141 3.06e-50 169
Msa1083070 MtrunA17_Chr4g0070641 64.103 117 42 0 1 117 1 117 2.02e-49 165
Msa1083070 MtrunA17_Chr4g0068061 65.517 116 40 0 1 116 1 116 4.02e-49 169
Msa1083070 MtrunA17_Chr8g0342511 80.460 87 17 0 1 87 1 87 1.23e-48 160
Msa1083070 MtrunA17_Chr8g0346561 61.864 118 45 0 1 118 1 118 2.17e-48 166
Msa1083070 MtrunA17_Chr2g0311221 64.220 109 39 0 2 110 4 112 4.04e-48 166
Msa1083070 MtrunA17_Chr1g0151941 52.985 134 59 2 1 133 1 131 6.13e-48 164
Msa1083070 MtrunA17_Chr7g0275911 62.393 117 44 0 1 117 1 117 7.79e-48 163
Msa1083070 MtrunA17_Chr1g0152011 63.333 120 43 1 1 119 1 120 8.39e-48 166
Msa1083070 MtrunA17_Chr8g0342531 77.528 89 20 0 1 89 1 89 8.94e-48 160
Msa1083070 MtrunA17_Chr4g0022931 59.829 117 47 0 5 121 6 122 1.48e-47 163
Msa1083070 MtrunA17_Chr7g0217221 62.712 118 44 0 1 118 1 118 1.84e-47 163
Msa1083070 MtrunA17_Chr1g0194951 64.655 116 41 0 1 116 1 116 5.31e-47 164
Msa1083070 MtrunA17_Chr4g0028311 63.248 117 42 1 1 116 1 117 6.05e-47 163
Msa1083070 MtrunA17_Chr5g0400821 50.625 160 73 2 1 159 1 155 7.31e-47 162
Msa1083070 MtrunA17_Chr4g0022901 62.162 111 42 0 5 115 6 116 8.50e-47 161
Msa1083070 MtrunA17_Chr3g0135311 61.538 117 44 1 1 116 1 117 1.30e-46 163
Msa1083070 MtrunA17_Chr3g0092401 61.017 118 46 0 1 118 2 119 1.24e-45 159
Msa1083070 MtrunA17_Chr4g0060721 53.472 144 57 2 1 142 2 137 1.47e-45 160
Msa1083070 MtrunA17_Chr4g0022911 58.621 116 47 1 1 115 1 116 2.06e-45 158
Msa1083070 MtrunA17_Chr2g0327351 63.964 111 39 1 1 110 1 111 7.49e-45 157
Msa1083070 MtrunA17_Chr7g0254411 58.400 125 50 1 1 123 1 125 1.18e-44 157
Msa1083070 MtrunA17_Chr7g0264641 59.829 117 46 1 1 116 1 117 1.48e-44 155
Msa1083070 MtrunA17_Chr8g0342461 74.444 90 22 1 1 89 1 90 4.08e-44 150
Msa1083070 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 4.30e-44 155
Msa1083070 MtrunA17_Chr1g0168661 60.526 114 45 0 4 117 13 126 1.31e-43 152
Msa1083070 MtrunA17_Chr8g0342471 74.444 90 22 1 1 89 1 90 1.62e-43 148
Msa1083070 MtrunA17_Chr6g0453211 61.818 110 42 0 1 110 1 110 3.59e-43 153
Msa1083070 MtrunA17_Chr1g0186061 61.261 111 43 0 5 115 13 123 7.05e-43 150
Msa1083070 MtrunA17_Chr7g0228231 57.500 120 49 1 1 118 1 120 1.70e-42 148
Msa1083070 MtrunA17_Chr7g0269831 64.655 116 41 0 1 116 1 116 2.22e-42 152
Msa1083070 MtrunA17_Chr7g0247131 70.455 88 26 0 43 130 9 96 2.55e-42 149
Msa1083070 MtrunA17_Chr6g0450101 60.185 108 43 0 11 118 13 120 3.54e-42 147
Msa1083070 MtrunA17_Chr4g0022881 53.788 132 54 1 1 125 1 132 7.97e-42 147
Msa1083070 MtrunA17_Chr4g0022891 60.360 111 44 0 9 119 9 119 1.21e-41 147
Msa1083070 MtrunA17_Chr3g0099131 60.748 107 42 0 12 118 41 147 1.26e-41 154
Msa1083070 MtrunA17_Chr4g0072751 59.459 111 44 1 1 110 1 111 2.48e-41 149
Msa1083070 MtrunA17_Chr4g0042611 67.045 88 29 0 1 88 1 88 2.72e-41 140
Msa1083070 MtrunA17_Chr1g0209661 56.250 112 49 0 11 122 26 137 4.64e-41 147
Msa1083070 MtrunA17_Chr4g0055981 50.704 142 67 1 9 147 52 193 6.87e-41 144
Msa1083070 MtrunA17_Chr1g0194301 54.310 116 53 0 12 127 33 148 7.33e-41 145
Msa1083070 MtrunA17_Chr8g0343831 60.000 110 44 0 10 119 6 115 1.47e-40 144
Msa1083070 MtrunA17_Chr6g0487491 55.645 124 46 2 1 115 1 124 2.35e-40 144
Msa1083070 MtrunA17_Chr1g0154031 60.577 104 41 0 12 115 76 179 4.27e-40 147
Msa1083070 MtrunA17_Chr1g0194291 56.897 116 50 0 12 127 21 136 7.11e-40 143
Msa1083070 MtrunA17_Chr8g0354661 59.615 104 42 0 12 115 37 140 5.31e-39 146
Msa1083070 MtrunA17_Chr3g0080861 56.604 106 46 0 12 117 37 142 8.89e-39 145
Msa1083070 MtrunA17_Chr1g0180391 56.604 106 46 0 12 117 19 124 1.65e-38 138
Msa1083070 MtrunA17_Chr7g0240821 56.757 111 48 0 17 127 6 116 1.23e-37 135
Msa1083070 MtrunA17_Chr2g0322521 62.500 104 39 0 12 115 29 132 2.62e-37 139
Msa1083070 MtrunA17_Chr5g0434931 54.545 110 50 0 12 121 35 144 3.93e-37 136
Msa1083070 MtrunA17_Chr5g0434911 53.982 113 52 0 7 119 16 128 7.33e-37 135
Msa1083070 MtrunA17_Chr5g0434831 59.048 105 43 0 12 116 7 111 1.00e-36 132
Msa1083070 MtrunA17_Chr2g0293911 55.172 116 52 0 12 127 24 139 2.41e-36 135
Msa1083070 MtrunA17_Chr4g0068921 55.172 116 52 0 12 127 24 139 2.58e-36 131
Msa1083070 MtrunA17_Chr5g0440781 53.571 112 50 2 13 123 13 123 6.18e-36 130
Msa1083070 MtrunA17_Chr1g0192411 55.140 107 48 0 11 117 11 117 1.43e-35 135
Msa1083070 MtrunA17_Chr5g0441141 53.571 112 50 2 13 123 13 123 2.54e-35 131
Msa1083070 MtrunA17_Chr5g0440761 53.571 112 50 2 13 123 13 123 3.12e-35 130
Msa1083070 MtrunA17_Chr7g0220341 56.364 110 46 1 12 119 25 134 3.22e-35 130
Msa1083070 MtrunA17_Chr2g0327821 50.450 111 55 0 9 119 3 113 3.79e-35 129
Msa1083070 MtrunA17_Chr5g0434841 57.143 105 45 0 12 116 20 124 6.18e-35 131
Msa1083070 MtrunA17_Chr7g0228991 54.630 108 49 0 12 119 29 136 1.37e-34 129
Msa1083070 MtrunA17_Chr4g0030881 51.754 114 48 1 13 119 8 121 1.67e-34 128
Msa1083070 MtrunA17_Chr2g0294811 61.364 88 34 0 1 88 1 88 2.13e-34 124
Msa1083070 MtrunA17_Chr8g0360111 57.426 101 43 0 12 112 25 125 4.01e-34 127
Msa1083070 MtrunA17_Chr5g0441131 51.786 112 52 2 13 123 10 120 1.52e-32 121
Msa1083070 MtrunA17_Chr4g0013361 43.709 151 77 5 12 160 10 154 4.52e-32 123
Msa1083070 MtrunA17_Chr8g0334881 52.336 107 50 1 9 114 7 113 1.99e-31 122
Msa1083070 MtrunA17_Chr3g0099141 58.824 85 35 0 12 96 40 124 3.12e-31 116
Msa1083070 MtrunA17_Chr2g0323321 59.302 86 35 0 7 92 6 91 6.69e-31 114
Msa1083070 MtrunA17_Chr5g0401731 37.173 191 102 5 14 203 15 188 1.59e-30 119
Msa1083070 MtrunA17_Chr5g0395221 62.500 80 30 0 9 88 9 88 2.11e-30 112
Msa1083070 MtrunA17_Chr3g0093811 59.551 89 36 0 43 131 13 101 4.73e-30 117
Msa1083070 MtrunA17_Chr6g0454921 53.398 103 45 2 14 115 15 115 3.30e-28 110
Msa1083070 MtrunA17_Chr4g0008551 42.105 152 74 4 14 164 38 176 3.97e-28 113
Msa1083070 MtrunA17_Chr5g0429661 46.667 105 53 2 12 115 120 222 6.22e-28 113
Msa1083070 MtrunA17_Chr4g0053431 53.922 102 46 1 14 115 5 105 1.29e-27 110
Msa1083070 MtrunA17_Chr7g0238631 51.402 107 49 2 11 116 110 214 6.23e-27 112
Msa1083070 MtrunA17_Chr3g0133601 51.456 103 47 2 14 115 37 137 2.91e-26 105
Msa1083070 MtrunA17_Chr3g0139671 48.598 107 52 2 11 116 82 186 1.23e-25 109
Msa1083070 MtrunA17_Chr3g0117511 45.872 109 55 3 14 120 183 289 1.47e-25 107
Msa1083070 MtrunA17_Chr1g0157731 46.729 107 54 2 11 116 88 192 2.44e-24 105
Msa1083070 MtrunA17_Chr6g0480581 42.991 107 58 2 14 119 4 108 3.40e-24 100
Msa1083070 MtrunA17_Chr5g0417621 42.727 110 60 2 11 119 131 238 3.66e-24 103
Msa1083070 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 4.46e-24 96.3
Msa1083070 MtrunA17_Chr4g0058991 41.071 112 63 2 9 119 204 313 5.66e-24 103
Msa1083070 MtrunA17_Chr6g0453751 53.763 93 34 2 12 95 20 112 6.13e-24 96.3
Msa1083070 MtrunA17_Chr7g0229101 60.563 71 28 0 43 113 3 73 1.18e-23 97.8
Msa1083070 MtrunA17_Chr4g0042501 42.991 107 58 2 14 119 105 209 1.58e-23 101
Msa1083070 MtrunA17_Chr7g0229131 58.333 72 30 0 43 114 3 74 4.86e-23 95.1
Msa1083070 MtrunA17_Chr5g0437321 49.000 100 48 2 14 112 19 116 1.32e-22 96.7
Msa1083070 MtrunA17_Chr6g0460661 45.745 94 48 2 14 106 16 107 6.89e-22 91.7
Msa1083070 MtrunA17_Chr1g0177901 40.157 127 63 4 24 142 7 128 8.00e-22 92.8
Msa1083070 MtrunA17_Chr5g0425591 51.190 84 40 1 13 95 10 93 1.52e-21 88.6
Msa1083070 MtrunA17_Chr7g0228531 40.566 106 61 2 14 119 220 323 1.82e-21 95.9
Msa1083070 MtrunA17_Chr3g0125801 43.925 107 57 2 14 119 16 120 2.55e-21 93.2
Msa1083070 MtrunA17_Chr6g0460671 42.453 106 58 2 14 118 99 202 7.31e-21 93.2
Msa1083070 MtrunA17_Chr5g0397841 47.000 100 50 2 12 110 108 205 8.13e-21 94.0
Msa1083070 MtrunA17_Chr7g0228401 45.556 90 46 2 25 113 290 377 7.10e-20 91.3
Msa1083070 MtrunA17_Chr7g0228481 40.000 110 61 3 14 120 220 327 9.23e-19 87.8
Msa1083070 MtrunA17_Chr7g0254261 36.585 123 75 2 8 129 83 203 1.84e-18 86.3
Msa1083070 MtrunA17_Chr7g0233061 39.815 108 59 4 14 118 180 284 9.36e-18 84.0
Msa1083070 MtrunA17_Chr7g0238651 36.522 115 65 2 17 123 10 124 5.39e-17 81.6
Msa1083070 MtrunA17_Chr1g0193901 50.562 89 42 2 10 96 9 97 3.72e-16 73.9
Msa1083070 MtrunA17_Chr1g0193891 50.562 89 42 2 10 96 9 97 3.72e-16 73.9
Msa1083070 MtrunA17_Chr1g0193871 50.562 89 42 2 10 96 9 97 3.72e-16 73.9
Msa1083070 MtrunA17_Chr1g0193881 50.562 89 42 2 10 96 9 97 3.72e-16 73.9
Msa1083070 MtrunA17_Chr5g0416341 35.238 105 67 1 17 121 29 132 1.15e-15 78.6
Msa1083070 MtrunA17_Chr8g0362231 34.711 121 77 2 17 137 25 143 7.56e-15 75.9
Msa1083070 MtrunA17_Chr5g0395231 58.824 51 21 0 78 128 5 55 1.25e-13 70.5
Msa1083070 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 1.36e-12 62.8
Msa1083070 MtrunA17_Chr7g0247141 57.447 47 19 1 1 46 1 47 1.74e-12 62.0
Msa1083070 MtrunA17_Chr4g0042621 72.500 40 11 0 89 128 15 54 3.33e-12 67.0
Msa1083070 MtrunA17_Chr3g0104491 37.179 78 44 2 53 125 1 78 5.86e-12 65.9
Msa1083070 MtrunA17_Chr3g0145551 60.465 43 17 0 91 133 1 43 8.59e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083070 AT1G09540.1 45.755 424 149 15 1 401 1 366 7.19e-98 296
Msa1083070 AT1G57560.2 85.294 136 20 0 1 136 1 136 4.00e-85 261
Msa1083070 AT1G57560.1 87.786 131 16 0 1 131 1 131 1.85e-84 260
Msa1083070 AT4G01680.3 79.730 148 30 0 1 148 1 148 3.99e-84 257
Msa1083070 AT5G26660.1 86.364 132 18 0 1 132 1 132 3.34e-83 258
Msa1083070 AT4G01680.1 79.730 148 30 0 1 148 1 148 5.12e-83 257
Msa1083070 AT4G01680.2 73.750 160 30 1 1 148 1 160 1.45e-79 249
Msa1083070 AT3G12720.1 73.016 126 33 1 1 126 12 136 3.25e-66 213
Msa1083070 AT3G13890.2 80.172 116 23 0 1 116 1 116 5.42e-66 214
Msa1083070 AT3G13890.1 74.400 125 23 1 1 116 1 125 6.65e-63 206
Msa1083070 AT4G12350.1 55.556 171 72 1 1 167 1 171 1.07e-62 203
Msa1083070 AT3G61250.1 49.020 204 97 3 1 198 1 203 1.12e-62 204
Msa1083070 AT4G34990.1 58.710 155 64 0 1 155 1 155 4.52e-62 201
Msa1083070 AT1G63910.1 67.969 128 41 0 1 128 1 128 6.27e-62 204
Msa1083070 AT4G38620.1 59.494 158 60 2 1 154 1 158 9.50e-62 201
Msa1083070 AT3G02940.2 65.152 132 46 0 1 132 1 132 1.11e-61 201
Msa1083070 AT5G65230.1 52.332 193 67 3 1 174 1 187 1.19e-61 201
Msa1083070 AT5G15310.1 68.182 132 42 0 1 132 1 132 1.59e-61 202
Msa1083070 AT5G15310.2 68.182 132 42 0 1 132 1 132 1.74e-61 201
Msa1083070 AT5G15310.4 68.702 131 41 0 1 131 1 131 2.05e-61 199
Msa1083070 AT3G02940.1 65.152 132 46 0 1 132 1 132 3.00e-61 201
Msa1083070 AT3G02940.3 65.152 132 46 0 1 132 1 132 3.00e-61 201
Msa1083070 AT3G01140.2 70.079 127 38 0 1 127 1 127 3.19e-61 201
Msa1083070 AT1G34670.1 66.412 131 44 0 1 131 1 131 3.58e-61 202
Msa1083070 AT5G16600.1 67.939 131 42 0 1 131 1 131 3.63e-61 201
Msa1083070 AT5G16770.4 65.649 131 45 0 1 131 1 131 8.42e-61 200
Msa1083070 AT5G16770.3 65.649 131 45 0 1 131 1 131 8.42e-61 200
Msa1083070 AT1G22640.1 64.394 132 47 0 1 132 1 132 1.22e-60 197
Msa1083070 AT5G16770.1 65.649 131 45 0 1 131 1 131 2.19e-60 199
Msa1083070 AT5G16770.2 65.649 131 45 0 1 131 1 131 2.19e-60 199
Msa1083070 AT2G16720.1 65.649 131 45 0 1 131 1 131 2.68e-60 197
Msa1083070 AT4G21440.1 66.406 128 43 0 1 128 1 128 2.92e-60 199
Msa1083070 AT4G22680.1 63.504 137 50 0 1 137 1 137 8.15e-60 195
Msa1083070 AT5G10280.1 64.885 131 46 0 1 131 1 131 1.62e-59 197
Msa1083070 AT4G09460.1 59.441 143 58 0 1 143 1 143 3.29e-59 192
Msa1083070 AT4G05100.1 65.116 129 44 1 1 128 1 129 3.66e-59 196
Msa1083070 AT1G66230.1 65.385 130 45 0 1 130 1 130 1.18e-58 193
Msa1083070 AT4G17785.2 65.891 129 43 1 1 128 1 129 1.75e-58 194
Msa1083070 AT3G01140.1 70.492 122 36 0 6 127 49 170 1.92e-58 196
Msa1083070 AT4G17785.1 65.891 129 43 1 1 128 1 129 2.20e-58 194
Msa1083070 AT5G60890.1 62.016 129 49 0 1 129 1 129 2.82e-58 192
Msa1083070 AT5G56110.1 66.154 130 44 0 1 130 1 130 2.82e-58 193
Msa1083070 AT4G28110.1 63.281 128 47 0 1 128 1 128 8.45e-58 191
Msa1083070 AT1G18570.1 58.000 150 60 2 1 149 1 148 1.48e-57 192
Msa1083070 AT5G14340.1 60.000 140 56 0 1 140 13 152 7.63e-57 188
Msa1083070 AT1G35515.1 61.832 131 50 0 1 131 1 131 2.87e-56 184
Msa1083070 AT5G12870.1 75.229 109 27 0 10 118 16 124 2.88e-56 186
Msa1083070 AT5G54230.1 65.625 128 44 0 1 128 1 128 1.02e-55 186
Msa1083070 AT1G74430.1 65.625 128 44 0 1 128 1 128 1.17e-55 184
Msa1083070 AT5G62320.1 57.143 147 56 1 2 141 3 149 2.86e-55 183
Msa1083070 AT1G06180.1 69.828 116 35 0 1 116 1 116 4.33e-55 182
Msa1083070 AT5G07690.1 57.857 140 59 0 1 140 1 140 4.34e-55 185
Msa1083070 AT3G13540.1 57.353 136 58 0 6 141 17 152 1.21e-54 181
Msa1083070 AT3G23250.1 50.000 170 75 2 1 170 1 160 1.39e-54 182
Msa1083070 AT3G08500.1 70.940 117 31 1 4 117 19 135 1.59e-54 184
Msa1083070 AT5G61420.2 60.000 130 52 0 1 130 1 130 1.74e-54 184
Msa1083070 AT1G74080.1 60.465 129 51 0 1 129 1 129 1.29e-53 181
Msa1083070 AT2G31180.1 65.254 118 41 0 1 118 1 118 5.88e-53 177
Msa1083070 AT5G07700.1 57.778 135 57 0 1 135 1 135 1.56e-52 179
Msa1083070 AT5G07700.2 57.778 135 57 0 1 135 1 135 1.56e-52 179
Msa1083070 AT1G56160.1 66.957 115 38 0 2 116 4 118 3.04e-52 176
Msa1083070 AT3G28470.1 63.359 131 48 0 1 131 1 131 3.70e-52 177
Msa1083070 AT1G79180.1 65.812 117 40 0 2 118 4 120 3.01e-51 174
Msa1083070 AT1G18710.1 58.915 129 53 0 1 129 1 129 4.11e-50 170
Msa1083070 AT1G16490.1 64.348 115 41 0 2 116 4 118 1.17e-49 169
Msa1083070 AT3G48920.1 56.522 138 48 2 9 146 15 140 1.94e-48 166
Msa1083070 AT5G52260.1 71.028 107 31 0 9 115 9 115 7.79e-48 164
Msa1083070 AT5G62470.2 62.712 118 44 0 1 118 1 118 1.09e-47 166
Msa1083070 AT3G12820.1 61.538 117 45 0 3 119 5 121 1.69e-47 162
Msa1083070 AT3G47600.1 62.712 118 44 0 1 118 1 118 1.98e-47 165
Msa1083070 AT5G23000.1 63.248 117 42 1 1 116 1 117 3.64e-47 164
Msa1083070 AT5G49330.1 64.655 116 41 0 1 116 1 116 6.18e-47 164
Msa1083070 AT4G25560.1 67.593 108 35 0 8 115 6 113 7.30e-47 162
Msa1083070 AT5G26660.2 81.818 88 16 0 45 132 14 101 1.34e-46 162
Msa1083070 AT5G57620.1 62.393 117 43 1 1 116 1 117 1.88e-46 162
Msa1083070 AT3G49690.1 62.500 120 44 1 1 119 1 120 1.93e-46 162
Msa1083070 AT3G62610.1 62.069 116 44 0 1 116 1 116 2.81e-46 162
Msa1083070 AT2G47460.1 62.931 116 43 0 1 116 1 116 3.99e-46 162
Msa1083070 AT5G65790.1 61.667 120 45 1 1 119 1 120 5.44e-46 162
Msa1083070 AT5G62470.1 62.712 118 43 1 1 118 1 117 8.55e-46 161
Msa1083070 AT1G74650.1 62.931 116 43 0 1 116 1 116 8.81e-46 160
Msa1083070 AT1G08810.1 59.836 122 49 0 1 122 1 122 4.73e-45 157
Msa1083070 AT4G37780.1 59.167 120 48 1 1 119 1 120 1.25e-44 157
Msa1083070 AT5G14750.1 60.000 115 44 1 13 127 17 129 1.93e-44 153
Msa1083070 AT1G79180.2 51.333 150 40 1 2 118 4 153 2.05e-44 157
Msa1083070 AT2G36890.1 57.031 128 54 1 1 127 1 128 2.14e-44 156
Msa1083070 AT2G36890.2 57.480 127 53 1 1 126 42 168 3.70e-44 157
Msa1083070 AT3G28910.1 57.480 127 52 1 1 127 1 125 4.88e-44 156
Msa1083070 AT5G35550.1 55.072 138 60 1 1 136 1 138 6.96e-44 154
Msa1083070 AT3G01530.1 61.321 106 41 0 12 117 25 130 2.59e-43 150
Msa1083070 AT3G27810.1 57.522 113 48 0 9 121 17 129 3.80e-43 150
Msa1083070 AT5G40350.1 58.182 110 46 0 11 120 16 125 1.01e-42 149
Msa1083070 AT5G40330.1 42.781 187 99 4 13 194 13 196 1.34e-42 149
Msa1083070 AT5G06100.1 49.375 160 76 3 12 168 32 189 1.85e-42 155
Msa1083070 AT3G27920.1 58.879 107 44 0 10 116 12 118 3.14e-42 148
Msa1083070 AT2G26960.1 59.292 113 45 1 9 121 17 128 3.63e-42 153
Msa1083070 AT4G13480.1 65.714 105 36 0 13 117 7 111 3.71e-42 149
Msa1083070 AT3G24310.1 64.762 105 37 0 13 117 19 123 6.47e-42 149
Msa1083070 AT5G06100.5 49.375 160 76 3 12 168 32 189 8.05e-42 154
Msa1083070 AT5G06100.2 49.375 160 76 3 12 168 32 189 8.05e-42 154
Msa1083070 AT5G06100.3 49.375 160 76 3 12 168 32 189 8.05e-42 154
Msa1083070 AT5G06100.4 49.375 160 76 3 12 168 32 189 8.05e-42 154
Msa1083070 AT3G30210.1 43.820 178 95 1 13 185 28 205 2.85e-41 147
Msa1083070 AT5G52600.1 58.879 107 44 0 9 115 9 115 1.02e-40 143
Msa1083070 AT1G48000.1 56.410 117 51 0 11 127 31 147 2.23e-40 144
Msa1083070 AT5G55020.1 60.748 107 42 0 12 118 26 132 2.91e-40 150
Msa1083070 AT1G68320.1 54.167 120 55 0 10 129 17 136 3.56e-40 144
Msa1083070 AT3G11440.2 38.647 207 104 5 12 211 41 231 9.14e-40 148
Msa1083070 AT2G32460.2 50.376 133 65 1 12 144 6 137 2.00e-39 147
Msa1083070 AT2G32460.1 49.630 135 67 1 10 144 16 149 2.01e-39 147
Msa1083070 AT3G11440.3 38.095 210 107 5 9 211 38 231 3.07e-39 147
Msa1083070 AT3G11440.4 38.095 210 107 5 9 211 38 231 3.07e-39 147
Msa1083070 AT3G11440.1 38.095 210 107 5 9 211 38 231 3.07e-39 147
Msa1083070 AT1G25340.1 54.783 115 52 0 13 127 19 133 4.88e-39 141
Msa1083070 AT4G26930.1 52.308 130 57 3 12 141 19 143 6.22e-39 144
Msa1083070 AT2G47190.1 41.975 162 91 2 12 173 20 178 7.91e-38 138
Msa1083070 AT3G06490.1 56.897 116 50 0 12 127 19 134 2.38e-37 138
Msa1083070 AT5G59780.3 54.054 111 51 0 9 119 5 115 1.02e-36 134
Msa1083070 AT3G53200.1 44.667 150 78 1 9 158 6 150 1.79e-36 133
Msa1083070 AT5G49620.1 48.993 149 69 3 12 159 26 168 2.80e-36 135
Msa1083070 AT3G46130.1 55.140 107 48 0 13 119 10 116 4.08e-36 133
Msa1083070 AT1G66370.1 45.625 160 65 3 12 149 8 167 1.32e-35 131
Msa1083070 AT2G26950.1 48.276 116 59 1 6 121 10 124 1.45e-35 134
Msa1083070 AT1G25340.2 52.174 115 50 1 13 127 19 128 3.40e-34 128
Msa1083070 AT1G25340.3 52.174 115 50 1 13 127 19 128 8.53e-34 128
Msa1083070 AT1G56650.1 51.538 130 55 1 12 133 8 137 6.15e-33 124
Msa1083070 AT1G66380.1 59.615 104 42 0 12 115 8 111 7.33e-33 120
Msa1083070 AT5G49620.2 44.785 163 69 4 12 159 26 182 9.82e-33 125
Msa1083070 AT3G60460.1 52.336 107 50 1 9 114 8 114 1.85e-32 124
Msa1083070 AT1G66390.1 57.547 106 45 0 10 115 6 111 4.57e-31 119
Msa1083070 AT5G35550.2 61.702 94 36 0 43 136 48 141 8.24e-31 119
Msa1083070 AT5G14750.3 66.250 80 25 1 48 127 18 95 5.37e-30 114
Msa1083070 AT3G12820.2 68.056 72 23 0 48 119 2 73 6.45e-30 114
Msa1083070 AT3G27810.2 61.039 77 30 0 45 121 4 80 1.05e-29 113
Msa1083070 AT3G47600.2 57.895 95 36 1 24 118 22 112 1.25e-29 117
Msa1083070 AT5G40350.2 60.526 76 30 0 45 120 5 80 5.20e-29 111
Msa1083070 AT5G58850.1 40.000 155 84 4 12 165 103 249 1.86e-28 116
Msa1083070 AT3G46130.3 63.158 76 28 0 44 119 9 84 2.04e-28 111
Msa1083070 AT1G22640.3 64.865 74 26 0 58 131 1 74 2.19e-28 110
Msa1083070 AT5G59780.2 64.000 75 27 0 45 119 20 94 4.45e-28 110
Msa1083070 AT3G46130.4 64.000 75 27 0 45 119 20 94 4.82e-28 110
Msa1083070 AT3G53200.2 47.368 114 55 1 45 158 9 117 1.96e-27 108
Msa1083070 AT4G37260.1 51.852 108 49 2 14 120 13 118 3.38e-27 110
Msa1083070 AT3G27785.1 45.299 117 59 3 9 122 184 298 7.14e-27 111
Msa1083070 AT5G02320.1 40.588 170 83 6 11 164 124 291 1.52e-26 112
Msa1083070 AT5G02320.2 40.588 170 83 6 11 164 124 291 1.52e-26 112
Msa1083070 AT4G18770.1 44.643 112 59 2 9 119 212 321 1.60e-26 110
Msa1083070 AT5G02320.3 40.588 170 83 6 11 164 64 231 1.76e-26 111
Msa1083070 AT1G18960.1 44.068 118 61 3 14 130 10 123 4.20e-26 107
Msa1083070 AT2G23290.1 52.427 103 46 2 14 115 13 113 6.89e-26 106
Msa1083070 AT5G67300.1 50.485 103 48 2 14 115 6 106 7.83e-26 106
Msa1083070 AT3G09370.3 37.569 181 98 4 12 191 141 307 9.65e-26 109
Msa1083070 AT3G09370.2 37.569 181 98 4 12 191 133 299 9.84e-26 109
Msa1083070 AT3G09370.1 37.569 181 98 4 12 191 128 294 1.09e-25 108
Msa1083070 AT5G40360.1 42.453 106 60 1 9 114 153 257 1.52e-25 106
Msa1083070 AT5G11050.1 44.660 103 54 2 14 115 105 205 1.88e-25 107
Msa1083070 AT3G50060.1 43.750 128 68 3 14 140 6 130 3.26e-25 104
Msa1083070 AT3G55730.1 42.763 152 58 4 14 145 56 198 5.12e-25 105
Msa1083070 AT3G09230.1 50.000 104 49 2 14 116 55 156 6.10e-25 105
Msa1083070 AT1G69560.1 42.857 112 61 2 9 119 102 211 7.42e-25 104
Msa1083070 AT1G71030.2 57.143 77 33 0 51 127 5 81 7.63e-25 100
Msa1083070 AT1G69560.2 42.857 112 61 2 9 119 118 227 8.57e-25 104
Msa1083070 AT2G39880.1 52.427 103 46 2 14 115 50 150 9.25e-25 104
Msa1083070 AT1G71030.1 57.143 77 33 0 51 127 19 95 1.10e-24 100
Msa1083070 AT3G23250.2 45.536 112 51 2 58 169 1 102 3.07e-24 100
Msa1083070 AT1G26780.1 44.444 108 57 2 12 118 96 201 4.77e-24 101
Msa1083070 AT1G26780.2 44.444 108 57 2 12 118 96 201 6.48e-24 102
Msa1083070 AT1G17950.1 43.925 107 57 2 14 119 5 109 6.98e-24 99.8
Msa1083070 AT5G11510.3 46.729 107 54 2 11 116 78 182 1.02e-23 104
Msa1083070 AT5G11510.1 46.729 107 54 2 11 116 78 182 1.02e-23 104
Msa1083070 AT5G11510.4 46.729 107 54 2 11 116 78 182 1.02e-23 104
Msa1083070 AT5G11510.2 46.729 107 54 2 11 116 78 182 1.29e-23 103
Msa1083070 AT5G11510.5 46.729 107 54 2 11 116 78 182 1.33e-23 103
Msa1083070 AT4G32730.1 45.794 107 55 2 11 116 84 188 3.37e-23 102
Msa1083070 AT4G32730.5 45.794 107 55 2 11 116 84 188 3.43e-23 102
Msa1083070 AT4G32730.4 45.794 107 55 2 11 116 84 188 3.43e-23 102
Msa1083070 AT4G32730.3 45.794 107 55 2 11 116 84 188 3.43e-23 102
Msa1083070 AT4G32730.2 45.794 107 55 2 11 116 84 188 3.43e-23 102
Msa1083070 AT1G73410.1 45.283 106 55 2 14 118 6 109 1.04e-22 96.7
Msa1083070 AT1G66380.3 59.740 77 31 0 39 115 2 78 1.20e-22 92.4
Msa1083070 AT1G73410.2 45.283 106 55 2 14 118 6 109 3.98e-22 94.0
Msa1083070 AT2G25230.1 42.857 105 57 2 17 120 29 131 1.27e-21 93.2
Msa1083070 AT5G14750.4 64.516 62 22 0 58 119 1 62 3.48e-21 89.4
Msa1083070 AT5G14750.2 64.516 62 22 0 58 119 1 62 3.48e-21 89.4
Msa1083070 AT1G66380.2 57.692 78 33 0 12 89 8 85 1.54e-20 86.7
Msa1083070 AT4G33450.1 37.838 111 66 2 9 118 14 122 2.14e-20 90.1
Msa1083070 AT3G29020.1 38.318 107 63 2 14 119 65 169 2.31e-20 89.7
Msa1083070 AT3G29020.2 38.318 107 63 2 14 119 67 171 3.27e-20 90.9
Msa1083070 AT5G17800.1 39.048 105 63 1 14 118 93 196 5.70e-20 90.5
Msa1083070 AT2G02820.3 36.090 133 83 2 4 135 19 150 4.93e-18 85.1
Msa1083070 AT4G00540.2 42.342 111 58 3 12 118 101 209 6.75e-18 85.5
Msa1083070 AT2G02820.1 36.090 133 83 2 4 135 19 150 7.79e-18 85.5
Msa1083070 AT4G00540.1 42.342 111 58 3 12 118 99 207 1.12e-17 84.7
Msa1083070 AT2G02820.2 37.815 119 72 2 4 121 19 136 1.38e-17 84.7
Msa1083070 AT5G40430.1 38.318 107 62 3 9 114 49 152 4.23e-17 80.9
Msa1083070 AT1G14350.2 35.200 125 72 2 17 141 28 143 1.10e-16 82.0
Msa1083070 AT1G14350.1 35.200 125 72 2 17 141 28 143 1.10e-16 82.0
Msa1083070 AT2G37630.1 34.454 119 76 1 17 133 7 125 4.31e-15 76.6
Msa1083070 AT5G61420.1 64.000 50 18 0 81 130 2 51 5.91e-15 75.1
Msa1083070 AT5G39700.1 34.234 111 72 1 9 119 51 160 9.49e-15 72.8
Msa1083070 AT5G59780.1 58.000 50 21 0 70 119 1 50 1.50e-13 68.9
Msa1083070 AT3G46130.2 58.000 50 21 0 70 119 1 50 1.65e-13 69.3
Msa1083070 AT4G28110.2 68.293 41 13 0 88 128 4 44 3.58e-13 68.6
Msa1083070 AT1G74430.2 66.667 42 14 0 87 128 18 59 4.27e-13 68.2
Msa1083070 AT1G22640.2 62.222 45 17 0 88 132 16 60 4.69e-13 67.8
Msa1083070 AT4G25560.2 60.377 53 20 1 70 121 2 54 1.81e-12 66.6
Msa1083070 AT5G15310.3 61.224 49 19 0 84 132 5 53 4.28e-12 66.2
Msa1083070 AT5G14340.2 52.830 53 25 0 88 140 10 62 8.12e-12 64.3
Msa1083070 AT3G18100.1 36.458 96 60 1 13 108 545 639 2.31e-11 66.2
Msa1083070 AT3G18100.3 36.458 96 60 1 13 108 497 591 2.94e-11 65.9
Msa1083070 AT3G18100.4 36.458 96 60 1 13 108 384 478 3.00e-11 65.9
Msa1083070 AT3G18100.2 36.458 96 60 1 13 108 332 426 4.59e-11 65.1
Msa1083070 AT1G14350.3 34.694 98 55 2 56 153 23 111 5.46e-11 64.3
Msa1083070 AT1G14350.4 34.694 98 55 2 56 153 23 111 5.46e-11 64.3
Msa1083070 AT3G28910.2 55.769 52 21 1 78 129 2 51 7.12e-11 62.8

Find 78 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTTCTTTCTTTCTTT+TGG 0.137823 7_2:-83298698 None:intergenic
TAATTTGTACCGGCTAATTT+TGG 0.166668 7_2:-83297237 None:intergenic
CATTTCCAACGTGAATTATT+TGG 0.202469 7_2:+83298730 Msa1083070:three_prime_UTR
GGGATTCAAAACTGGGAATT+TGG 0.217605 7_2:+83298284 Msa1083070:CDS
TTAGAACTTAGAAGTTAAAA+AGG 0.242273 7_2:-83296946 None:intergenic
TTATCCATAGGAATAGAATT+TGG 0.264129 7_2:-83297948 None:intergenic
ATCTCATTGTCTGTTCTTCC+AGG 0.266646 7_2:-83297732 None:intergenic
GATGATTTGTGTTTGGAGTT+TGG 0.284873 7_2:-83298229 None:intergenic
AAATAGATTCTTCATTTCAT+TGG 0.307725 7_2:-83297910 None:intergenic
ATACCTTCTGATAATATGAT+TGG 0.321312 7_2:+83298026 Msa1083070:CDS
TCTGATAATATGATTGGATT+AGG 0.329996 7_2:+83298032 Msa1083070:CDS
AGAAGCTTCGTAAAGGTCTT+TGG 0.331287 7_2:+83297145 Msa1083070:CDS
GAACCTACGTGGAAATATTC+TGG 0.351767 7_2:-83297035 None:intergenic
AAGTAGTAGAAGACATTAAA+TGG 0.361317 7_2:+83298375 Msa1083070:CDS
GAGTGCATGAAGTTCAATTA+TGG 0.367556 7_2:-83297470 None:intergenic
AAGAAGAAGCTAAAGCAAAA+AGG 0.367784 7_2:+83297780 Msa1083070:CDS
GAGAATGGTTGGTGTGTGTT+TGG 0.373639 7_2:-83297810 None:intergenic
TTGGAGTTTGGAACATAGAA+TGG 0.390363 7_2:-83298217 None:intergenic
AAGTTGATGGGATTCAAAAC+TGG 0.391933 7_2:+83298276 Msa1083070:CDS
CCAACATCCATGACCATGTT+TGG 0.396862 7_2:-83297205 None:intergenic
TTATGAGGTTAAACAAGAAA+TGG 0.400366 7_2:+83298493 Msa1083070:CDS
TGAGGTGGATAAATTATCTA+AGG 0.408050 7_2:+83297404 Msa1083070:CDS
TTTGAAGGATGATTTGTGTT+TGG 0.410112 7_2:-83298236 None:intergenic
TATCTACAATGATAATTATG+AGG 0.411745 7_2:+83298478 Msa1083070:CDS
GAGTTAGCTAGCATAGGAAT+AGG 0.426702 7_2:-83297007 None:intergenic
TTGTCATTGTTCTCAGAGAA+TGG 0.430460 7_2:-83297825 None:intergenic
AAATCCAAATTCTATTCCTA+TGG 0.434974 7_2:+83297944 Msa1083070:CDS
AATGCTCCTCTCTTCAAATC+AGG 0.437135 7_2:-83297427 None:intergenic
ATATCCTCTGGTGAAGTTGA+TGG 0.440161 7_2:+83298263 Msa1083070:CDS
CAGATTGCAGCTCAGTTACC+TGG 0.453409 7_2:+83297714 Msa1083070:CDS
CCAGAGGATATAGAATTTGA+AGG 0.456217 7_2:-83298251 None:intergenic
TAAATAGAAGAAGGAAACTC+TGG 0.465925 7_2:-83296881 None:intergenic
AATTATTATAGTAGTGAAGA+AGG 0.470313 7_2:-83296970 None:intergenic
TTCATGCACTCCTAGGCAAC+AGG 0.471657 7_2:+83297482 Msa1083070:CDS
GATGATTATCTTGATGATCA+AGG 0.492875 7_2:-83298352 None:intergenic
CATTGTTCTCAGAGAATGGT+TGG 0.496170 7_2:-83297821 None:intergenic
CCAAACATGGTCATGGATGT+TGG 0.497424 7_2:+83297205 Msa1083070:CDS
TATCCTCTGGTGAAGTTGAT+GGG 0.501245 7_2:+83298264 Msa1083070:CDS
ATTGAACTTCATGCACTCCT+AGG 0.501954 7_2:+83297475 Msa1083070:CDS
AAAGTGAAATAAATAGAAGA+AGG 0.502636 7_2:-83296890 None:intergenic
CCTTCAAATTCTATATCCTC+TGG 0.506664 7_2:+83298251 Msa1083070:CDS
ATTATTGGTACCTGTTGCCT+AGG 0.519891 7_2:-83297492 None:intergenic
ATTTGAAAGAGGTTAATTGA+AGG 0.541672 7_2:+83297086 Msa1083070:five_prime_UTR
GATAATATGATTGGATTAGG+AGG 0.542857 7_2:+83298035 Msa1083070:CDS
AGCTCAGTTCCAAAATTAGC+CGG 0.545198 7_2:+83297228 Msa1083070:CDS
CTAAGGCCTGATTTGAAGAG+AGG 0.548695 7_2:+83297421 Msa1083070:CDS
ATAATTCACGTTGGAAATGT+CGG 0.549261 7_2:-83298726 None:intergenic
ATCTGAATATTGTCAGTCAT+AGG 0.553088 7_2:-83297867 None:intergenic
GAATTAGCAGCTTCAAAATG+AGG 0.555614 7_2:-83298566 None:intergenic
TTGAATTATATCACCAAACA+TGG 0.555661 7_2:+83297192 Msa1083070:CDS
CATTTGAGAGCAAGTAGAAG+TGG 0.556588 7_2:-83298174 None:intergenic
TATATCACCAAACATGGTCA+TGG 0.565539 7_2:+83297198 Msa1083070:CDS
AGTTGATGGGATTCAAAACT+GGG 0.565732 7_2:+83298277 Msa1083070:CDS
ATTCAAAACTGGGAATTTGG+TGG 0.568240 7_2:+83298287 Msa1083070:CDS
TGCTTCATACCAAGTACTAG+TGG 0.570925 7_2:+83298149 Msa1083070:CDS
ATTATTATAGTAGTGAAGAA+GGG 0.572433 7_2:-83296969 None:intergenic
TACAAGCAGAAGCTTCGTAA+AGG 0.572527 7_2:+83297138 Msa1083070:CDS
CATATATGTCAGGTTTGCAA+AGG 0.573277 7_2:+83297362 Msa1083070:intron
GAAGTGGAACCACTAGTACT+TGG 0.579651 7_2:-83298158 None:intergenic
GGTGGAAGCAAAAGCAGCAA+TGG 0.583904 7_2:+83298305 Msa1083070:CDS
TTGTCCTCACTTCTGACCAC+AGG 0.587293 7_2:+83298764 Msa1083070:three_prime_UTR
GGATAATTGCAATTATCCAT+AGG 0.590102 7_2:-83297960 None:intergenic
GAGGAAGAGTTAGCTAGCAT+AGG 0.595275 7_2:-83297013 None:intergenic
TTAATTGAAGGAAGTGCACA+TGG 0.600032 7_2:+83297098 Msa1083070:exon
TCTGACCAAATAATTCACGT+TGG 0.610612 7_2:-83298735 None:intergenic
CCTCCAGAATATTTCCACGT+AGG 0.610799 7_2:+83297032 Msa1083070:five_prime_UTR
AATCCAATCATATTATCAGA+AGG 0.613198 7_2:-83298029 None:intergenic
ATGTCAGGTTTGCAAAGGTG+TGG 0.628146 7_2:+83297367 Msa1083070:intron
TTCACTTTACACGTACGTGG+TGG 0.644712 7_2:+83298662 Msa1083070:three_prime_UTR
CATTTCATTGGATCCCACAG+AGG 0.648243 7_2:-83297898 None:intergenic
AATCCCATCAACTTCACCAG+AGG 0.648801 7_2:-83298267 None:intergenic
TTCAATCAAGTAGTAGCACA+TGG 0.651827 7_2:+83298540 Msa1083070:CDS
GCAAAAGCTGTAGATTGAGG+TGG 0.662689 7_2:+83297389 Msa1083070:CDS
CACACCTGTGGTCAGAAGTG+AGG 0.663925 7_2:-83298768 None:intergenic
GTGGCAAAAGCTGTAGATTG+AGG 0.666838 7_2:+83297386 Msa1083070:CDS
AAATTTACAGCACACACCTG+TGG 0.706142 7_2:-83298780 None:intergenic
CCTACGTGGAAATATTCTGG+AGG 0.709436 7_2:-83297032 None:intergenic
TAATTGAAGGAAGTGCACAT+GGG 0.721231 7_2:+83297099 Msa1083070:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCAATAATTATAATAATTA+AGG + chr7_2:83297506-83297525 Msa1083070:intron 10.0%
!! TCCTTAATTATTATAATTAT+TGG - chr7_2:83297510-83297529 None:intergenic 10.0%
!! ACCAATAATTATAATAATTA+AGG + chr7_2:83297506-83297525 Msa1083070:intron 10.0%
!! TCCTTAATTATTATAATTAT+TGG - chr7_2:83297510-83297529 None:intergenic 10.0%
!! AAAAAAAAAACATTTGAAAG+AGG + chr7_2:83297075-83297094 Msa1083070:five_prime_UTR 15.0%
!! TGACTAATATATATATACTT+TGG + chr7_2:83297666-83297685 Msa1083070:intron 15.0%
!!! ATTTTTGAATTAATTTCAAG+GGG - chr7_2:83297984-83298003 None:intergenic 15.0%
!!! GATTTTTGAATTAATTTCAA+GGG - chr7_2:83297985-83298004 None:intergenic 15.0%
!!! TGATTTTTGAATTAATTTCA+AGG - chr7_2:83297986-83298005 None:intergenic 15.0%
!! AAAAAAAAAACATTTGAAAG+AGG + chr7_2:83297075-83297094 Msa1083070:five_prime_UTR 15.0%
!! TGACTAATATATATATACTT+TGG + chr7_2:83297666-83297685 Msa1083070:intron 15.0%
!!! ATTTTTGAATTAATTTCAAG+GGG - chr7_2:83297984-83298003 None:intergenic 15.0%
!!! GATTTTTGAATTAATTTCAA+GGG - chr7_2:83297985-83298004 None:intergenic 15.0%
!!! TGATTTTTGAATTAATTTCA+AGG - chr7_2:83297986-83298005 None:intergenic 15.0%
!! AAAGTGAAATAAATAGAAGA+AGG - chr7_2:83296893-83296912 None:intergenic 20.0%
!!! AAAGGTTTTGAGAAATAAAA+TGG - chr7_2:83296931-83296950 None:intergenic 20.0%
!! TTAGAACTTAGAAGTTAAAA+AGG - chr7_2:83296949-83296968 None:intergenic 20.0%
!! ATTATTATAGTAGTGAAGAA+GGG - chr7_2:83296972-83296991 None:intergenic 20.0%
!! AATTATTATAGTAGTGAAGA+AGG - chr7_2:83296973-83296992 None:intergenic 20.0%
!! GACATTTAACATATAGTTAT+TGG - chr7_2:83297275-83297294 None:intergenic 20.0%
!! ACAATGAGATAAAAAATCTA+TGG + chr7_2:83297745-83297764 Msa1083070:CDS 20.0%
!! AAATAGATTCTTCATTTCAT+TGG - chr7_2:83297913-83297932 None:intergenic 20.0%
!!! AATTTTCAACAACTTAACTA+TGG + chr7_2:83298068-83298087 Msa1083070:CDS 20.0%
!! TATCTACAATGATAATTATG+AGG + chr7_2:83298478-83298497 Msa1083070:CDS 20.0%
!! AAAGTGAAATAAATAGAAGA+AGG - chr7_2:83296893-83296912 None:intergenic 20.0%
!!! AAAGGTTTTGAGAAATAAAA+TGG - chr7_2:83296931-83296950 None:intergenic 20.0%
!! TTAGAACTTAGAAGTTAAAA+AGG - chr7_2:83296949-83296968 None:intergenic 20.0%
!! ATTATTATAGTAGTGAAGAA+GGG - chr7_2:83296972-83296991 None:intergenic 20.0%
!! AATTATTATAGTAGTGAAGA+AGG - chr7_2:83296973-83296992 None:intergenic 20.0%
!! GACATTTAACATATAGTTAT+TGG - chr7_2:83297275-83297294 None:intergenic 20.0%
!! ACAATGAGATAAAAAATCTA+TGG + chr7_2:83297745-83297764 Msa1083070:CDS 20.0%
!! AAATAGATTCTTCATTTCAT+TGG - chr7_2:83297913-83297932 None:intergenic 20.0%
!!! AATTTTCAACAACTTAACTA+TGG + chr7_2:83298068-83298087 Msa1083070:CDS 20.0%
!! TATCTACAATGATAATTATG+AGG + chr7_2:83298478-83298497 Msa1083070:CDS 20.0%
! ATTTGAAAGAGGTTAATTGA+AGG + chr7_2:83297086-83297105 Msa1083070:five_prime_UTR 25.0%
! TTGAATTATATCACCAAACA+TGG + chr7_2:83297192-83297211 Msa1083070:CDS 25.0%
!! TATATGCAACTAATTTGTAC+CGG - chr7_2:83297250-83297269 None:intergenic 25.0%
!! ATAAGTGTTGCATTTAGATT+TGG + chr7_2:83297534-83297553 Msa1083070:intron 25.0%
! AAATCCAAATTCTATTCCTA+TGG + chr7_2:83297944-83297963 Msa1083070:CDS 25.0%
! TTATCCATAGGAATAGAATT+TGG - chr7_2:83297951-83297970 None:intergenic 25.0%
! ATACCTTCTGATAATATGAT+TGG + chr7_2:83298026-83298045 Msa1083070:CDS 25.0%
! AATCCAATCATATTATCAGA+AGG - chr7_2:83298032-83298051 None:intergenic 25.0%
! TCTGATAATATGATTGGATT+AGG + chr7_2:83298032-83298051 Msa1083070:CDS 25.0%
! AAGTAGTAGAAGACATTAAA+TGG + chr7_2:83298375-83298394 Msa1083070:CDS 25.0%
!!! TTGTTGTTTCCATGAAAAAA+TGG - chr7_2:83298422-83298441 None:intergenic 25.0%
! TTATGAGGTTAAACAAGAAA+TGG + chr7_2:83298493-83298512 Msa1083070:CDS 25.0%
!! AGATCTTCAAAGATTTTCAA+TGG + chr7_2:83298607-83298626 Msa1083070:CDS 25.0%
!! CTTTCTTTCTTTCTTTCTTT+TGG - chr7_2:83298701-83298720 None:intergenic 25.0%
!! TTTTGTTCATCAAACACATA+AGG + chr7_2:83298939-83298958 Msa1083070:three_prime_UTR 25.0%
! ATTTGAAAGAGGTTAATTGA+AGG + chr7_2:83297086-83297105 Msa1083070:five_prime_UTR 25.0%
! TTGAATTATATCACCAAACA+TGG + chr7_2:83297192-83297211 Msa1083070:CDS 25.0%
!! TATATGCAACTAATTTGTAC+CGG - chr7_2:83297250-83297269 None:intergenic 25.0%
!! ATAAGTGTTGCATTTAGATT+TGG + chr7_2:83297534-83297553 Msa1083070:intron 25.0%
! AAATCCAAATTCTATTCCTA+TGG + chr7_2:83297944-83297963 Msa1083070:CDS 25.0%
! TTATCCATAGGAATAGAATT+TGG - chr7_2:83297951-83297970 None:intergenic 25.0%
! ATACCTTCTGATAATATGAT+TGG + chr7_2:83298026-83298045 Msa1083070:CDS 25.0%
! AATCCAATCATATTATCAGA+AGG - chr7_2:83298032-83298051 None:intergenic 25.0%
! TCTGATAATATGATTGGATT+AGG + chr7_2:83298032-83298051 Msa1083070:CDS 25.0%
! AAGTAGTAGAAGACATTAAA+TGG + chr7_2:83298375-83298394 Msa1083070:CDS 25.0%
!!! TTGTTGTTTCCATGAAAAAA+TGG - chr7_2:83298422-83298441 None:intergenic 25.0%
! TTATGAGGTTAAACAAGAAA+TGG + chr7_2:83298493-83298512 Msa1083070:CDS 25.0%
!! AGATCTTCAAAGATTTTCAA+TGG + chr7_2:83298607-83298626 Msa1083070:CDS 25.0%
!! CTTTCTTTCTTTCTTTCTTT+TGG - chr7_2:83298701-83298720 None:intergenic 25.0%
!! TTTTGTTCATCAAACACATA+AGG + chr7_2:83298939-83298958 Msa1083070:three_prime_UTR 25.0%
TAAATAGAAGAAGGAAACTC+TGG - chr7_2:83296884-83296903 None:intergenic 30.0%
! AAAAGCTTTTCATCTTCTTC+TGG - chr7_2:83297174-83297193 None:intergenic 30.0%
!!! TAATTTGTACCGGCTAATTT+TGG - chr7_2:83297240-83297259 None:intergenic 30.0%
GTGAGTGCACATTAATATAT+AGG + chr7_2:83297331-83297350 Msa1083070:intron 30.0%
GGACAATTATCATATATGTC+AGG + chr7_2:83297352-83297371 Msa1083070:intron 30.0%
TGAGGTGGATAAATTATCTA+AGG + chr7_2:83297404-83297423 Msa1083070:CDS 30.0%
!! TTGGTGCTTTTTGAATTATC+AGG + chr7_2:83297685-83297704 Msa1083070:intron 30.0%
AAGAAGAAGCTAAAGCAAAA+AGG + chr7_2:83297780-83297799 Msa1083070:CDS 30.0%
ATCTGAATATTGTCAGTCAT+AGG - chr7_2:83297870-83297889 None:intergenic 30.0%
GGATAATTGCAATTATCCAT+AGG - chr7_2:83297963-83297982 None:intergenic 30.0%
! GATAATATGATTGGATTAGG+AGG + chr7_2:83298035-83298054 Msa1083070:CDS 30.0%
! TTGTTGTTGTTGTTGGAATA+TGG - chr7_2:83298116-83298135 None:intergenic 30.0%
! TTTGAAGGATGATTTGTGTT+TGG - chr7_2:83298239-83298258 None:intergenic 30.0%
! GATGATTATCTTGATGATCA+AGG - chr7_2:83298355-83298374 None:intergenic 30.0%
!!! AACTCTAGTCCATTTTTTCA+TGG + chr7_2:83298410-83298429 Msa1083070:CDS 30.0%
! CAAAGATTTTCAATGGCTTT+TGG + chr7_2:83298614-83298633 Msa1083070:CDS 30.0%
ATAATTCACGTTGGAAATGT+CGG - chr7_2:83298729-83298748 None:intergenic 30.0%
CATTTCCAACGTGAATTATT+TGG + chr7_2:83298730-83298749 Msa1083070:three_prime_UTR 30.0%
TAAATAGAAGAAGGAAACTC+TGG - chr7_2:83296884-83296903 None:intergenic 30.0%
! AAAAGCTTTTCATCTTCTTC+TGG - chr7_2:83297174-83297193 None:intergenic 30.0%
!!! TAATTTGTACCGGCTAATTT+TGG - chr7_2:83297240-83297259 None:intergenic 30.0%
GTGAGTGCACATTAATATAT+AGG + chr7_2:83297331-83297350 Msa1083070:intron 30.0%
GGACAATTATCATATATGTC+AGG + chr7_2:83297352-83297371 Msa1083070:intron 30.0%
TGAGGTGGATAAATTATCTA+AGG + chr7_2:83297404-83297423 Msa1083070:CDS 30.0%
!! TTGGTGCTTTTTGAATTATC+AGG + chr7_2:83297685-83297704 Msa1083070:intron 30.0%
AAGAAGAAGCTAAAGCAAAA+AGG + chr7_2:83297780-83297799 Msa1083070:CDS 30.0%
ATCTGAATATTGTCAGTCAT+AGG - chr7_2:83297870-83297889 None:intergenic 30.0%
GGATAATTGCAATTATCCAT+AGG - chr7_2:83297963-83297982 None:intergenic 30.0%
! GATAATATGATTGGATTAGG+AGG + chr7_2:83298035-83298054 Msa1083070:CDS 30.0%
! TTGTTGTTGTTGTTGGAATA+TGG - chr7_2:83298116-83298135 None:intergenic 30.0%
! TTTGAAGGATGATTTGTGTT+TGG - chr7_2:83298239-83298258 None:intergenic 30.0%
! GATGATTATCTTGATGATCA+AGG - chr7_2:83298355-83298374 None:intergenic 30.0%
!!! AACTCTAGTCCATTTTTTCA+TGG + chr7_2:83298410-83298429 Msa1083070:CDS 30.0%
! CAAAGATTTTCAATGGCTTT+TGG + chr7_2:83298614-83298633 Msa1083070:CDS 30.0%
ATAATTCACGTTGGAAATGT+CGG - chr7_2:83298729-83298748 None:intergenic 30.0%
CATTTCCAACGTGAATTATT+TGG + chr7_2:83298730-83298749 Msa1083070:three_prime_UTR 30.0%
! TTAATTGAAGGAAGTGCACA+TGG + chr7_2:83297098-83297117 Msa1083070:exon 35.0%
! TAATTGAAGGAAGTGCACAT+GGG + chr7_2:83297099-83297118 Msa1083070:exon 35.0%
TATATCACCAAACATGGTCA+TGG + chr7_2:83297198-83297217 Msa1083070:CDS 35.0%
CATATATGTCAGGTTTGCAA+AGG + chr7_2:83297362-83297381 Msa1083070:intron 35.0%
GAGTGCATGAAGTTCAATTA+TGG - chr7_2:83297473-83297492 None:intergenic 35.0%
!! GTGCTTTTTGAATTATCAGG+TGG + chr7_2:83297688-83297707 Msa1083070:intron 35.0%
TTGTCATTGTTCTCAGAGAA+TGG - chr7_2:83297828-83297847 None:intergenic 35.0%
TCAGATTCAAAAAACCTCTG+TGG + chr7_2:83297884-83297903 Msa1083070:CDS 35.0%
CAGATTCAAAAAACCTCTGT+GGG + chr7_2:83297885-83297904 Msa1083070:CDS 35.0%
! ACTGTTGTTGTTGTTGTTGT+TGG - chr7_2:83298123-83298142 None:intergenic 35.0%
! TTGGAGTTTGGAACATAGAA+TGG - chr7_2:83298220-83298239 None:intergenic 35.0%
! GATGATTTGTGTTTGGAGTT+TGG - chr7_2:83298232-83298251 None:intergenic 35.0%
CCAGAGGATATAGAATTTGA+AGG - chr7_2:83298254-83298273 None:intergenic 35.0%
CCTTCAAATTCTATATCCTC+TGG + chr7_2:83298251-83298270 Msa1083070:CDS 35.0%
!! AAGTTGATGGGATTCAAAAC+TGG + chr7_2:83298276-83298295 Msa1083070:CDS 35.0%
!! AGTTGATGGGATTCAAAACT+GGG + chr7_2:83298277-83298296 Msa1083070:CDS 35.0%
ATTCAAAACTGGGAATTTGG+TGG + chr7_2:83298287-83298306 Msa1083070:CDS 35.0%
TTCAATCAAGTAGTAGCACA+TGG + chr7_2:83298540-83298559 Msa1083070:CDS 35.0%
GAATTAGCAGCTTCAAAATG+AGG - chr7_2:83298569-83298588 None:intergenic 35.0%
! ATTTTCACTTTACACGTACG+TGG + chr7_2:83298659-83298678 Msa1083070:three_prime_UTR 35.0%
TCTGACCAAATAATTCACGT+TGG - chr7_2:83298738-83298757 None:intergenic 35.0%
! TTAATTGAAGGAAGTGCACA+TGG + chr7_2:83297098-83297117 Msa1083070:exon 35.0%
! TAATTGAAGGAAGTGCACAT+GGG + chr7_2:83297099-83297118 Msa1083070:exon 35.0%
TATATCACCAAACATGGTCA+TGG + chr7_2:83297198-83297217 Msa1083070:CDS 35.0%
CATATATGTCAGGTTTGCAA+AGG + chr7_2:83297362-83297381 Msa1083070:intron 35.0%
GAGTGCATGAAGTTCAATTA+TGG - chr7_2:83297473-83297492 None:intergenic 35.0%
!! GTGCTTTTTGAATTATCAGG+TGG + chr7_2:83297688-83297707 Msa1083070:intron 35.0%
TTGTCATTGTTCTCAGAGAA+TGG - chr7_2:83297828-83297847 None:intergenic 35.0%
TCAGATTCAAAAAACCTCTG+TGG + chr7_2:83297884-83297903 Msa1083070:CDS 35.0%
CAGATTCAAAAAACCTCTGT+GGG + chr7_2:83297885-83297904 Msa1083070:CDS 35.0%
! ACTGTTGTTGTTGTTGTTGT+TGG - chr7_2:83298123-83298142 None:intergenic 35.0%
! TTGGAGTTTGGAACATAGAA+TGG - chr7_2:83298220-83298239 None:intergenic 35.0%
! GATGATTTGTGTTTGGAGTT+TGG - chr7_2:83298232-83298251 None:intergenic 35.0%
CCAGAGGATATAGAATTTGA+AGG - chr7_2:83298254-83298273 None:intergenic 35.0%
CCTTCAAATTCTATATCCTC+TGG + chr7_2:83298251-83298270 Msa1083070:CDS 35.0%
!! AAGTTGATGGGATTCAAAAC+TGG + chr7_2:83298276-83298295 Msa1083070:CDS 35.0%
!! AGTTGATGGGATTCAAAACT+GGG + chr7_2:83298277-83298296 Msa1083070:CDS 35.0%
ATTCAAAACTGGGAATTTGG+TGG + chr7_2:83298287-83298306 Msa1083070:CDS 35.0%
TTCAATCAAGTAGTAGCACA+TGG + chr7_2:83298540-83298559 Msa1083070:CDS 35.0%
GAATTAGCAGCTTCAAAATG+AGG - chr7_2:83298569-83298588 None:intergenic 35.0%
! ATTTTCACTTTACACGTACG+TGG + chr7_2:83298659-83298678 Msa1083070:three_prime_UTR 35.0%
TCTGACCAAATAATTCACGT+TGG - chr7_2:83298738-83298757 None:intergenic 35.0%
GAGTTAGCTAGCATAGGAAT+AGG - chr7_2:83297010-83297029 None:intergenic 40.0%
GAACCTACGTGGAAATATTC+TGG - chr7_2:83297038-83297057 None:intergenic 40.0%
TACAAGCAGAAGCTTCGTAA+AGG + chr7_2:83297138-83297157 Msa1083070:CDS 40.0%
AGAAGCTTCGTAAAGGTCTT+TGG + chr7_2:83297145-83297164 Msa1083070:CDS 40.0%
AGCTCAGTTCCAAAATTAGC+CGG + chr7_2:83297228-83297247 Msa1083070:CDS 40.0%
AATGCTCCTCTCTTCAAATC+AGG - chr7_2:83297430-83297449 None:intergenic 40.0%
ATTGAACTTCATGCACTCCT+AGG + chr7_2:83297475-83297494 Msa1083070:CDS 40.0%
ATTATTGGTACCTGTTGCCT+AGG - chr7_2:83297495-83297514 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+AGG - chr7_2:83297735-83297754 None:intergenic 40.0%
CATTGTTCTCAGAGAATGGT+TGG - chr7_2:83297824-83297843 None:intergenic 40.0%
TGCTTCATACCAAGTACTAG+TGG + chr7_2:83298149-83298168 Msa1083070:CDS 40.0%
CATTTGAGAGCAAGTAGAAG+TGG - chr7_2:83298177-83298196 None:intergenic 40.0%
ATATCCTCTGGTGAAGTTGA+TGG + chr7_2:83298263-83298282 Msa1083070:CDS 40.0%
! TATCCTCTGGTGAAGTTGAT+GGG + chr7_2:83298264-83298283 Msa1083070:CDS 40.0%
GGGATTCAAAACTGGGAATT+TGG + chr7_2:83298284-83298303 Msa1083070:CDS 40.0%
AAATTTACAGCACACACCTG+TGG - chr7_2:83298783-83298802 None:intergenic 40.0%
GAGTTAGCTAGCATAGGAAT+AGG - chr7_2:83297010-83297029 None:intergenic 40.0%
GAACCTACGTGGAAATATTC+TGG - chr7_2:83297038-83297057 None:intergenic 40.0%
TACAAGCAGAAGCTTCGTAA+AGG + chr7_2:83297138-83297157 Msa1083070:CDS 40.0%
AGAAGCTTCGTAAAGGTCTT+TGG + chr7_2:83297145-83297164 Msa1083070:CDS 40.0%
AGCTCAGTTCCAAAATTAGC+CGG + chr7_2:83297228-83297247 Msa1083070:CDS 40.0%
AATGCTCCTCTCTTCAAATC+AGG - chr7_2:83297430-83297449 None:intergenic 40.0%
ATTGAACTTCATGCACTCCT+AGG + chr7_2:83297475-83297494 Msa1083070:CDS 40.0%
ATTATTGGTACCTGTTGCCT+AGG - chr7_2:83297495-83297514 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+AGG - chr7_2:83297735-83297754 None:intergenic 40.0%
CATTGTTCTCAGAGAATGGT+TGG - chr7_2:83297824-83297843 None:intergenic 40.0%
TGCTTCATACCAAGTACTAG+TGG + chr7_2:83298149-83298168 Msa1083070:CDS 40.0%
CATTTGAGAGCAAGTAGAAG+TGG - chr7_2:83298177-83298196 None:intergenic 40.0%
ATATCCTCTGGTGAAGTTGA+TGG + chr7_2:83298263-83298282 Msa1083070:CDS 40.0%
! TATCCTCTGGTGAAGTTGAT+GGG + chr7_2:83298264-83298283 Msa1083070:CDS 40.0%
GGGATTCAAAACTGGGAATT+TGG + chr7_2:83298284-83298303 Msa1083070:CDS 40.0%
AAATTTACAGCACACACCTG+TGG - chr7_2:83298783-83298802 None:intergenic 40.0%
GAGGAAGAGTTAGCTAGCAT+AGG - chr7_2:83297016-83297035 None:intergenic 45.0%
CCTACGTGGAAATATTCTGG+AGG - chr7_2:83297035-83297054 None:intergenic 45.0%
CCTCCAGAATATTTCCACGT+AGG + chr7_2:83297032-83297051 Msa1083070:five_prime_UTR 45.0%
! CTTTTGTGTCAGAACCTACG+TGG - chr7_2:83297049-83297068 None:intergenic 45.0%
CCAACATCCATGACCATGTT+TGG - chr7_2:83297208-83297227 None:intergenic 45.0%
CCAAACATGGTCATGGATGT+TGG + chr7_2:83297205-83297224 Msa1083070:CDS 45.0%
ATGTCAGGTTTGCAAAGGTG+TGG + chr7_2:83297367-83297386 Msa1083070:intron 45.0%
GTGGCAAAAGCTGTAGATTG+AGG + chr7_2:83297386-83297405 Msa1083070:CDS 45.0%
GCAAAAGCTGTAGATTGAGG+TGG + chr7_2:83297389-83297408 Msa1083070:CDS 45.0%
! CTAAGGCCTGATTTGAAGAG+AGG + chr7_2:83297421-83297440 Msa1083070:CDS 45.0%
! GAGAATGGTTGGTGTGTGTT+TGG - chr7_2:83297813-83297832 None:intergenic 45.0%
CATTTCATTGGATCCCACAG+AGG - chr7_2:83297901-83297920 None:intergenic 45.0%
GAAGTGGAACCACTAGTACT+TGG - chr7_2:83298161-83298180 None:intergenic 45.0%
AATCCCATCAACTTCACCAG+AGG - chr7_2:83298270-83298289 None:intergenic 45.0%
TTCACTTTACACGTACGTGG+TGG + chr7_2:83298662-83298681 Msa1083070:three_prime_UTR 45.0%
GAGGAAGAGTTAGCTAGCAT+AGG - chr7_2:83297016-83297035 None:intergenic 45.0%
CCTACGTGGAAATATTCTGG+AGG - chr7_2:83297035-83297054 None:intergenic 45.0%
CCTCCAGAATATTTCCACGT+AGG + chr7_2:83297032-83297051 Msa1083070:five_prime_UTR 45.0%
! CTTTTGTGTCAGAACCTACG+TGG - chr7_2:83297049-83297068 None:intergenic 45.0%
CCAACATCCATGACCATGTT+TGG - chr7_2:83297208-83297227 None:intergenic 45.0%
CCAAACATGGTCATGGATGT+TGG + chr7_2:83297205-83297224 Msa1083070:CDS 45.0%
ATGTCAGGTTTGCAAAGGTG+TGG + chr7_2:83297367-83297386 Msa1083070:intron 45.0%
GTGGCAAAAGCTGTAGATTG+AGG + chr7_2:83297386-83297405 Msa1083070:CDS 45.0%
GCAAAAGCTGTAGATTGAGG+TGG + chr7_2:83297389-83297408 Msa1083070:CDS 45.0%
! CTAAGGCCTGATTTGAAGAG+AGG + chr7_2:83297421-83297440 Msa1083070:CDS 45.0%
! GAGAATGGTTGGTGTGTGTT+TGG - chr7_2:83297813-83297832 None:intergenic 45.0%
CATTTCATTGGATCCCACAG+AGG - chr7_2:83297901-83297920 None:intergenic 45.0%
GAAGTGGAACCACTAGTACT+TGG - chr7_2:83298161-83298180 None:intergenic 45.0%
AATCCCATCAACTTCACCAG+AGG - chr7_2:83298270-83298289 None:intergenic 45.0%
TTCACTTTACACGTACGTGG+TGG + chr7_2:83298662-83298681 Msa1083070:three_prime_UTR 45.0%
TTCATGCACTCCTAGGCAAC+AGG + chr7_2:83297482-83297501 Msa1083070:CDS 50.0%
CAGATTGCAGCTCAGTTACC+TGG + chr7_2:83297714-83297733 Msa1083070:CDS 50.0%
GGTGGAAGCAAAAGCAGCAA+TGG + chr7_2:83298305-83298324 Msa1083070:CDS 50.0%
TTGTCCTCACTTCTGACCAC+AGG + chr7_2:83298764-83298783 Msa1083070:three_prime_UTR 50.0%
TTCATGCACTCCTAGGCAAC+AGG + chr7_2:83297482-83297501 Msa1083070:CDS 50.0%
CAGATTGCAGCTCAGTTACC+TGG + chr7_2:83297714-83297733 Msa1083070:CDS 50.0%
GGTGGAAGCAAAAGCAGCAA+TGG + chr7_2:83298305-83298324 Msa1083070:CDS 50.0%
TTGTCCTCACTTCTGACCAC+AGG + chr7_2:83298764-83298783 Msa1083070:three_prime_UTR 50.0%
CACACCTGTGGTCAGAAGTG+AGG - chr7_2:83298771-83298790 None:intergenic 55.0%
CACACCTGTGGTCAGAAGTG+AGG - chr7_2:83298771-83298790 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 83296881 83298965 83296881 ID=Msa1083070;Name=Msa1083070
chr7_2 mRNA 83296881 83298965 83296881 ID=Msa1083070-mRNA-1;Parent=Msa1083070;Name=Msa1083070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=236|1|1|1|1|1|3|313|402
chr7_2 exon 83296881 83297249 83296881 ID=Msa1083070-mRNA-1:exon:21824;Parent=Msa1083070-mRNA-1
chr7_2 exon 83297374 83297503 83297374 ID=Msa1083070-mRNA-1:exon:21825;Parent=Msa1083070-mRNA-1
chr7_2 exon 83297707 83298965 83297707 ID=Msa1083070-mRNA-1:exon:21826;Parent=Msa1083070-mRNA-1
chr7_2 five_prime_UTR 83296881 83297116 83296881 ID=Msa1083070-mRNA-1:five_prime_utr;Parent=Msa1083070-mRNA-1
chr7_2 CDS 83297117 83297249 83297117 ID=Msa1083070-mRNA-1:cds;Parent=Msa1083070-mRNA-1
chr7_2 CDS 83297374 83297503 83297374 ID=Msa1083070-mRNA-1:cds;Parent=Msa1083070-mRNA-1
chr7_2 CDS 83297707 83298652 83297707 ID=Msa1083070-mRNA-1:cds;Parent=Msa1083070-mRNA-1
chr7_2 three_prime_UTR 83298653 83298965 83298653 ID=Msa1083070-mRNA-1:three_prime_utr;Parent=Msa1083070-mRNA-1
Gene Sequence

>Msa1083070

ATGGGAAGACATTCTTGTTGCTACAAGCAGAAGCTTCGTAAAGGTCTTTGGTCTCCAGAAGAAGATGAAAAGCTTTTGAATTATATCACCAAACATGGTCATGGATGTTGGAGCTCAGTTCCAAAATTAGCCGGTTTGCAAAGGTGTGGCAAAAGCTGTAGATTGAGGTGGATAAATTATCTAAGGCCTGATTTGAAGAGAGGAGCATTCTCAGAGCAAGAAGAGAATTCCATAATTGAACTTCATGCACTCCTAGGCAACAGGTGGTCGCAGATTGCAGCTCAGTTACCTGGAAGAACAGACAATGAGATAAAAAATCTATGGAATTCAAGTCTGAAGAAGAAGCTAAAGCAAAAAGGAATTGATCCAAACACACACCAACCATTCTCTGAGAACAATGACAATAATGACAAGCAGCAATTACCTATGACTGACAATATTCAGATTCAAAAAACCTCTGTGGGATCCAATGAAATGAAGAATCTATTTGATGATACACTAAATCCAAATTCTATTCCTATGGATAATTGCAATTATCCCCTTGAAATTAATTCAAAAATCAACAACTCAGTTAATTGCTTCATACCTTCTGATAATATGATTGGATTAGGAGGATCATATCTCAATTTTCAACAACTTAACTATGGAATTAATAACATGACTCTATCTCCATATTCCAACAACAACAACAACAACAGTTCACTTTGCTTCATACCAAGTACTAGTGGTTCCACTTCTACTTGCTCTCAAATGATGTCAGAATTCAATTCTTTCCATTCTATGTTCCAAACTCCAAACACAAATCATCCTTCAAATTCTATATCCTCTGGTGAAGTTGATGGGATTCAAAACTGGGAATTTGGTGGAAGCAAAAGCAGCAATGGAAGCAGCAGTAACAACATTAATTACCTTGATCATCAAGATAATCATCAAGTAGTAGAAGACATTAAATGGTCTGATTATATAAACTCTAGTCCATTTTTTCATGGAAACAACAACACATTTCAGCAGCAGAATCATCAAACACACTCTTCTATCTACAATGATAATTATGAGGTTAAACAAGAAATGGAGTTCATTAATACAAACGAATCTATTCAATCAAGTAGTAGCACATGGCATCCTCATTTTGAAGCTGCTAATTCAGATATATATAGCAACAAAGATCTTCAAAGATTTTCAATGGCTTTTGGACAAACACTTAATTAG

Protein sequence

>Msa1083070

MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSEQEENSIIELHALLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLKQKGIDPNTHQPFSENNDNNDKQQLPMTDNIQIQKTSVGSNEMKNLFDDTLNPNSIPMDNCNYPLEINSKINNSVNCFIPSDNMIGLGGSYLNFQQLNYGINNMTLSPYSNNNNNNSSLCFIPSTSGSTSTCSQMMSEFNSFHSMFQTPNTNHPSNSISSGEVDGIQNWEFGGSKSSNGSSSNNINYLDHQDNHQVVEDIKWSDYINSSPFFHGNNNTFQQQNHQTHSSIYNDNYEVKQEMEFINTNESIQSSSSTWHPHFEAANSDIYSNKDLQRFSMAFGQTLN*