Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1090380 | XP_013442913.1 | 94.527 | 402 | 22 | 0 | 1 | 402 | 39 | 440 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1090380 | sp|Q9SU30|CPR1_ARATH | 23.762 | 404 | 257 | 13 | 1 | 384 | 1 | 373 | 5.06e-18 | 89.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1090380 | A0A072TJA1 | 94.527 | 402 | 22 | 0 | 1 | 402 | 39 | 440 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719600 | Msa1090380 | 0.817876 | 2.627269e-52 | -8.615850e-47 |
| Msa1029840 | Msa1090380 | 0.801739 | 7.810500e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1090380 | MtrunA17_Chr7g0228861 | 94.527 | 402 | 22 | 0 | 1 | 402 | 39 | 440 | 0.0 | 795 |
| Msa1090380 | MtrunA17_Chr7g0228751 | 66.005 | 403 | 127 | 4 | 1 | 402 | 31 | 424 | 0.0 | 540 |
| Msa1090380 | MtrunA17_Chr5g0420521 | 66.247 | 397 | 117 | 7 | 1 | 385 | 42 | 433 | 1.13e-178 | 504 |
| Msa1090380 | MtrunA17_Chr6g0475451 | 65.491 | 397 | 119 | 8 | 1 | 384 | 39 | 430 | 1.51e-178 | 504 |
| Msa1090380 | MtrunA17_Chr1g0179411 | 60.569 | 246 | 89 | 5 | 163 | 403 | 15 | 257 | 4.47e-95 | 286 |
| Msa1090380 | MtrunA17_Chr4g0005431 | 27.163 | 416 | 248 | 14 | 3 | 382 | 21 | 417 | 2.65e-28 | 115 |
| Msa1090380 | MtrunA17_Chr3g0133441 | 26.108 | 406 | 247 | 15 | 3 | 379 | 22 | 403 | 2.09e-26 | 109 |
| Msa1090380 | MtrunA17_Chr3g0082421 | 25.758 | 330 | 189 | 11 | 4 | 320 | 29 | 315 | 3.69e-25 | 105 |
| Msa1090380 | MtrunA17_Chr6g0477631 | 25.989 | 354 | 206 | 14 | 4 | 353 | 16 | 317 | 7.02e-25 | 104 |
| Msa1090380 | MtrunA17_Chr3g0082441 | 25.138 | 362 | 222 | 12 | 1 | 353 | 26 | 347 | 1.97e-24 | 103 |
| Msa1090380 | MtrunA17_Chr2g0287121 | 25.208 | 361 | 222 | 13 | 1 | 353 | 18 | 338 | 2.88e-24 | 103 |
| Msa1090380 | MtrunA17_Chr2g0287071 | 26.142 | 394 | 239 | 12 | 1 | 379 | 11 | 367 | 9.25e-24 | 101 |
| Msa1090380 | MtrunA17_Chr7g0214991 | 25.995 | 377 | 226 | 16 | 1 | 358 | 29 | 371 | 1.70e-23 | 101 |
| Msa1090380 | MtrunA17_Chr8g0360921 | 26.904 | 394 | 245 | 16 | 3 | 381 | 11 | 376 | 5.34e-23 | 99.8 |
| Msa1090380 | MtrunA17_Chr4g0065061 | 26.076 | 395 | 213 | 18 | 3 | 384 | 22 | 350 | 1.05e-22 | 99.0 |
| Msa1090380 | MtrunA17_Chr4g0075791 | 23.367 | 398 | 242 | 14 | 1 | 379 | 1 | 354 | 1.06e-22 | 99.0 |
| Msa1090380 | MtrunA17_Chr8g0339911 | 29.572 | 257 | 149 | 12 | 4 | 254 | 1 | 231 | 2.14e-22 | 95.9 |
| Msa1090380 | MtrunA17_Chr1g0176661 | 26.329 | 395 | 251 | 15 | 3 | 388 | 12 | 375 | 6.36e-22 | 96.7 |
| Msa1090380 | MtrunA17_Chr3g0081931 | 24.936 | 393 | 228 | 14 | 1 | 365 | 30 | 383 | 1.26e-21 | 95.9 |
| Msa1090380 | MtrunA17_Chr2g0292331 | 23.641 | 368 | 233 | 12 | 5 | 367 | 52 | 376 | 1.30e-21 | 95.9 |
| Msa1090380 | MtrunA17_Chr4g0027011 | 26.727 | 333 | 203 | 12 | 4 | 328 | 30 | 329 | 1.43e-21 | 95.5 |
| Msa1090380 | MtrunA17_Chr4g0061251 | 26.687 | 326 | 186 | 12 | 1 | 318 | 5 | 285 | 1.50e-21 | 95.1 |
| Msa1090380 | MtrunA17_Chr3g0079611 | 27.245 | 323 | 193 | 14 | 4 | 321 | 42 | 327 | 1.65e-21 | 95.5 |
| Msa1090380 | MtrunA17_Chr4g0010531 | 24.750 | 400 | 234 | 18 | 4 | 392 | 3 | 346 | 2.45e-21 | 94.7 |
| Msa1090380 | MtrunA17_Chr5g0423781 | 25.231 | 325 | 192 | 10 | 4 | 324 | 46 | 323 | 2.56e-21 | 94.7 |
| Msa1090380 | MtrunA17_Chr4g0010561 | 25.369 | 406 | 231 | 19 | 1 | 392 | 41 | 388 | 2.82e-21 | 95.1 |
| Msa1090380 | MtrunA17_Chr2g0303031 | 25.153 | 326 | 185 | 12 | 4 | 316 | 24 | 303 | 4.74e-21 | 94.0 |
| Msa1090380 | MtrunA17_Chr5g0447601 | 25.799 | 407 | 258 | 14 | 2 | 383 | 14 | 401 | 6.75e-21 | 94.0 |
| Msa1090380 | MtrunA17_Chr3g0090591 | 24.930 | 357 | 233 | 10 | 1 | 349 | 29 | 358 | 7.41e-21 | 93.6 |
| Msa1090380 | MtrunA17_Chr5g0423791 | 25.356 | 351 | 203 | 15 | 4 | 342 | 46 | 349 | 7.47e-21 | 93.6 |
| Msa1090380 | MtrunA17_Chr3g0078231 | 26.254 | 339 | 201 | 12 | 4 | 332 | 49 | 348 | 8.87e-21 | 93.6 |
| Msa1090380 | MtrunA17_Chr3g0088901 | 23.929 | 397 | 235 | 12 | 4 | 379 | 20 | 370 | 1.31e-20 | 92.8 |
| Msa1090380 | MtrunA17_Chr7g0228911 | 24.033 | 362 | 216 | 13 | 1 | 351 | 35 | 348 | 1.47e-20 | 92.8 |
| Msa1090380 | MtrunA17_Chr1g0174821 | 26.415 | 424 | 240 | 18 | 3 | 385 | 15 | 407 | 1.54e-20 | 92.8 |
| Msa1090380 | MtrunA17_Chr5g0405331 | 24.439 | 446 | 249 | 15 | 1 | 382 | 36 | 457 | 1.65e-20 | 93.6 |
| Msa1090380 | MtrunA17_Chr6g0468711 | 26.479 | 355 | 190 | 14 | 1 | 332 | 36 | 342 | 2.04e-20 | 92.4 |
| Msa1090380 | MtrunA17_Chr1g0182431 | 26.087 | 368 | 222 | 15 | 1 | 355 | 1 | 331 | 2.11e-20 | 92.0 |
| Msa1090380 | MtrunA17_Chr3g0090301 | 27.554 | 323 | 196 | 15 | 3 | 316 | 8 | 301 | 2.26e-20 | 92.0 |
| Msa1090380 | MtrunA17_Chr8g0353991 | 26.730 | 318 | 199 | 10 | 1 | 316 | 21 | 306 | 2.89e-20 | 91.7 |
| Msa1090380 | MtrunA17_Chr2g0333411 | 24.439 | 401 | 231 | 16 | 3 | 366 | 13 | 378 | 3.44e-20 | 91.7 |
| Msa1090380 | MtrunA17_Chr5g0397741 | 25.118 | 422 | 250 | 16 | 2 | 381 | 56 | 453 | 4.14e-20 | 92.0 |
| Msa1090380 | MtrunA17_Chr8g0350131 | 27.848 | 395 | 231 | 16 | 3 | 384 | 39 | 392 | 4.15e-20 | 91.3 |
| Msa1090380 | MtrunA17_Chr5g0397761 | 24.228 | 421 | 253 | 14 | 1 | 381 | 55 | 449 | 4.43e-20 | 92.0 |
| Msa1090380 | MtrunA17_Chr3g0134731 | 25.693 | 397 | 247 | 16 | 3 | 388 | 19 | 378 | 4.59e-20 | 91.3 |
| Msa1090380 | MtrunA17_Chr5g0393561 | 27.692 | 325 | 189 | 14 | 1 | 314 | 11 | 300 | 4.85e-20 | 89.7 |
| Msa1090380 | MtrunA17_Chr6g0458161 | 27.778 | 324 | 178 | 14 | 15 | 320 | 31 | 316 | 6.09e-20 | 90.9 |
| Msa1090380 | MtrunA17_Chr3g0081901 | 26.048 | 334 | 203 | 16 | 4 | 324 | 44 | 346 | 7.20e-20 | 90.9 |
| Msa1090380 | MtrunA17_Chr5g0423801 | 26.426 | 333 | 189 | 14 | 4 | 324 | 46 | 334 | 7.99e-20 | 90.5 |
| Msa1090380 | MtrunA17_Chr3g0078181 | 23.677 | 359 | 218 | 13 | 1 | 349 | 33 | 345 | 1.04e-19 | 90.1 |
| Msa1090380 | MtrunA17_Chr3g0086471 | 29.841 | 315 | 172 | 16 | 10 | 321 | 37 | 305 | 1.84e-19 | 89.4 |
| Msa1090380 | MtrunA17_Chr3g0090281 | 25.538 | 372 | 217 | 17 | 3 | 348 | 8 | 345 | 2.17e-19 | 89.0 |
| Msa1090380 | MtrunA17_Chr4g0009891 | 25.316 | 395 | 239 | 17 | 3 | 388 | 8 | 355 | 2.84e-19 | 88.6 |
| Msa1090380 | MtrunA17_Chr1g0182401 | 25.936 | 374 | 228 | 16 | 1 | 361 | 1 | 338 | 3.10e-19 | 88.6 |
| Msa1090380 | MtrunA17_Chr4g0014071 | 24.227 | 388 | 240 | 15 | 1 | 373 | 1 | 349 | 4.53e-19 | 88.2 |
| Msa1090380 | MtrunA17_Chr4g0012621 | 23.165 | 436 | 262 | 17 | 1 | 382 | 27 | 443 | 4.84e-19 | 89.0 |
| Msa1090380 | MtrunA17_Chr6g0483111 | 26.781 | 407 | 247 | 18 | 3 | 377 | 13 | 400 | 5.08e-19 | 88.2 |
| Msa1090380 | MtrunA17_Chr4g0062591 | 28.358 | 335 | 173 | 14 | 4 | 318 | 9 | 296 | 5.17e-19 | 87.8 |
| Msa1090380 | MtrunA17_Chr6g0470221 | 26.630 | 368 | 216 | 16 | 1 | 357 | 25 | 349 | 5.86e-19 | 88.2 |
| Msa1090380 | MtrunA17_Chr3g0080461 | 22.167 | 406 | 223 | 15 | 1 | 379 | 41 | 380 | 6.07e-19 | 87.8 |
| Msa1090380 | MtrunA17_Chr3g0080511 | 25.062 | 403 | 238 | 17 | 4 | 379 | 235 | 600 | 6.19e-19 | 89.0 |
| Msa1090380 | MtrunA17_Chr6g0476271 | 25.815 | 399 | 239 | 16 | 2 | 381 | 6 | 366 | 6.84e-19 | 87.4 |
| Msa1090380 | MtrunA17_Chr1g0176211 | 25.460 | 326 | 197 | 14 | 1 | 316 | 17 | 306 | 7.09e-19 | 87.4 |
| Msa1090380 | MtrunA17_Chr5g0405441 | 24.396 | 414 | 258 | 15 | 2 | 382 | 33 | 424 | 7.09e-19 | 88.2 |
| Msa1090380 | MtrunA17_Chr4g0010581 | 25.062 | 403 | 229 | 18 | 4 | 392 | 3 | 346 | 7.32e-19 | 87.4 |
| Msa1090380 | MtrunA17_Chr2g0317101 | 24.796 | 367 | 218 | 14 | 1 | 358 | 30 | 347 | 7.46e-19 | 87.4 |
| Msa1090380 | MtrunA17_Chr3g0080191 | 25.000 | 332 | 211 | 12 | 1 | 320 | 31 | 336 | 7.51e-19 | 87.8 |
| Msa1090380 | MtrunA17_Chr3g0121321 | 25.505 | 396 | 232 | 17 | 1 | 379 | 72 | 421 | 7.94e-19 | 87.8 |
| Msa1090380 | MtrunA17_Chr2g0303601 | 24.251 | 367 | 218 | 15 | 3 | 355 | 7 | 327 | 8.22e-19 | 87.0 |
| Msa1090380 | MtrunA17_Chr4g0061241 | 26.687 | 326 | 186 | 15 | 4 | 318 | 8 | 291 | 8.36e-19 | 87.4 |
| Msa1090380 | MtrunA17_Chr3g0091191 | 25.905 | 359 | 180 | 19 | 4 | 342 | 26 | 318 | 9.02e-19 | 87.0 |
| Msa1090380 | MtrunA17_Chr4g0066071 | 28.213 | 319 | 192 | 12 | 1 | 316 | 8 | 292 | 1.05e-18 | 87.0 |
| Msa1090380 | MtrunA17_Chr3g0079631 | 27.469 | 324 | 182 | 13 | 4 | 320 | 41 | 318 | 1.05e-18 | 87.0 |
| Msa1090380 | MtrunA17_Chr5g0397791 | 25.424 | 354 | 209 | 11 | 2 | 320 | 32 | 365 | 1.17e-18 | 87.0 |
| Msa1090380 | MtrunA17_Chr4g0066101 | 25.320 | 391 | 238 | 16 | 3 | 378 | 22 | 373 | 1.71e-18 | 86.7 |
| Msa1090380 | MtrunA17_Chr3g0078431 | 24.398 | 332 | 187 | 12 | 7 | 321 | 55 | 339 | 1.77e-18 | 86.7 |
| Msa1090380 | MtrunA17_Chr3g0086431 | 24.365 | 394 | 219 | 14 | 4 | 379 | 34 | 366 | 2.08e-18 | 86.3 |
| Msa1090380 | MtrunA17_Chr2g0299051 | 23.844 | 411 | 259 | 14 | 3 | 379 | 15 | 405 | 2.20e-18 | 86.7 |
| Msa1090380 | MtrunA17_Chr5g0429271 | 24.060 | 399 | 269 | 13 | 3 | 379 | 25 | 411 | 2.57e-18 | 86.3 |
| Msa1090380 | MtrunA17_Chr3g0080541 | 24.935 | 385 | 250 | 18 | 2 | 374 | 12 | 369 | 2.65e-18 | 85.9 |
| Msa1090380 | MtrunA17_Chr5g0405321 | 25.649 | 308 | 170 | 13 | 1 | 266 | 27 | 317 | 2.81e-18 | 86.3 |
| Msa1090380 | MtrunA17_Chr3g0080891 | 27.640 | 322 | 181 | 13 | 7 | 321 | 82 | 358 | 3.68e-18 | 85.9 |
| Msa1090380 | MtrunA17_Chr3g0078461 | 24.540 | 326 | 194 | 12 | 7 | 321 | 55 | 339 | 4.16e-18 | 85.5 |
| Msa1090380 | MtrunA17_Chr5g0429691 | 24.250 | 400 | 258 | 13 | 3 | 384 | 9 | 381 | 5.24e-18 | 85.1 |
| Msa1090380 | MtrunA17_Chr1g0199281 | 26.994 | 326 | 171 | 13 | 4 | 316 | 57 | 328 | 5.43e-18 | 85.5 |
| Msa1090380 | MtrunA17_Chr3g0080501 | 24.147 | 381 | 228 | 17 | 4 | 360 | 47 | 390 | 5.71e-18 | 85.1 |
| Msa1090380 | MtrunA17_Chr6g0468071 | 24.586 | 362 | 204 | 12 | 4 | 320 | 39 | 376 | 6.12e-18 | 85.1 |
| Msa1090380 | MtrunA17_Chr8g0350141 | 34.300 | 207 | 108 | 8 | 3 | 205 | 9 | 191 | 6.57e-18 | 84.3 |
| Msa1090380 | MtrunA17_Chr2g0287511 | 24.939 | 413 | 255 | 17 | 3 | 378 | 15 | 409 | 8.41e-18 | 84.7 |
| Msa1090380 | MtrunA17_Chr4g0057071 | 23.426 | 397 | 278 | 12 | 3 | 382 | 17 | 404 | 9.24e-18 | 84.7 |
| Msa1090380 | MtrunA17_Chr6g0468701 | 25.970 | 335 | 190 | 12 | 4 | 320 | 37 | 331 | 1.29e-17 | 84.3 |
| Msa1090380 | MtrunA17_Chr2g0303171 | 25.970 | 335 | 191 | 13 | 4 | 316 | 29 | 328 | 1.43e-17 | 84.3 |
| Msa1090380 | MtrunA17_Chr7g0220301 | 25.310 | 403 | 250 | 17 | 3 | 379 | 17 | 394 | 1.57e-17 | 84.0 |
| Msa1090380 | MtrunA17_Chr1g0169061 | 25.123 | 406 | 250 | 13 | 3 | 386 | 49 | 422 | 1.73e-17 | 84.0 |
| Msa1090380 | MtrunA17_Chr3g0091221 | 24.695 | 328 | 196 | 10 | 4 | 321 | 41 | 327 | 1.85e-17 | 83.6 |
| Msa1090380 | MtrunA17_Chr6g0483101 | 25.191 | 393 | 256 | 14 | 3 | 377 | 16 | 388 | 1.93e-17 | 83.6 |
| Msa1090380 | MtrunA17_Chr3g0094241 | 24.165 | 389 | 234 | 17 | 4 | 382 | 51 | 388 | 2.13e-17 | 83.6 |
| Msa1090380 | MtrunA17_Chr5g0447471 | 24.433 | 397 | 240 | 14 | 4 | 385 | 9 | 360 | 2.18e-17 | 83.2 |
| Msa1090380 | MtrunA17_Chr4g0012741 | 25.926 | 378 | 213 | 18 | 3 | 346 | 15 | 359 | 2.32e-17 | 83.2 |
| Msa1090380 | MtrunA17_Chr4g0010621 | 26.524 | 328 | 193 | 15 | 3 | 324 | 9 | 294 | 2.58e-17 | 82.8 |
| Msa1090380 | MtrunA17_Chr3g0080491 | 23.708 | 329 | 196 | 12 | 1 | 320 | 25 | 307 | 2.80e-17 | 82.8 |
| Msa1090380 | MtrunA17_Chr8g0370471 | 28.704 | 216 | 126 | 7 | 1 | 210 | 27 | 220 | 3.28e-17 | 80.5 |
| Msa1090380 | MtrunA17_Chr6g0453851 | 26.911 | 327 | 198 | 13 | 4 | 323 | 29 | 321 | 3.72e-17 | 82.8 |
| Msa1090380 | MtrunA17_Chr3g0079621 | 25.532 | 329 | 187 | 14 | 4 | 321 | 36 | 317 | 3.77e-17 | 82.4 |
| Msa1090380 | MtrunA17_Chr4g0066431 | 25.474 | 369 | 234 | 14 | 3 | 350 | 7 | 355 | 4.48e-17 | 82.0 |
| Msa1090380 | MtrunA17_Chr3g0090291 | 26.154 | 325 | 198 | 16 | 3 | 316 | 8 | 301 | 5.47e-17 | 82.0 |
| Msa1090380 | MtrunA17_Chr2g0333391 | 23.980 | 392 | 253 | 13 | 3 | 366 | 13 | 387 | 6.18e-17 | 82.0 |
| Msa1090380 | MtrunA17_Chr3g0080291 | 22.886 | 402 | 234 | 14 | 1 | 379 | 36 | 384 | 7.12e-17 | 81.6 |
| Msa1090380 | MtrunA17_Chr3g0089071 | 25.189 | 397 | 237 | 15 | 3 | 362 | 15 | 388 | 7.88e-17 | 81.6 |
| Msa1090380 | MtrunA17_Chr3g0080471 | 23.636 | 330 | 176 | 11 | 7 | 320 | 51 | 320 | 1.02e-16 | 81.3 |
| Msa1090380 | MtrunA17_Chr2g0291151 | 25.799 | 407 | 225 | 16 | 3 | 363 | 4 | 379 | 1.03e-16 | 81.6 |
| Msa1090380 | MtrunA17_Chr5g0395401 | 24.722 | 360 | 191 | 15 | 1 | 342 | 38 | 335 | 1.07e-16 | 81.3 |
| Msa1090380 | MtrunA17_Chr3g0078171 | 24.390 | 369 | 219 | 14 | 1 | 355 | 37 | 359 | 1.31e-16 | 80.9 |
| Msa1090380 | MtrunA17_Chr2g0303001 | 27.019 | 322 | 184 | 15 | 4 | 316 | 25 | 304 | 1.32e-16 | 80.9 |
| Msa1090380 | MtrunA17_Chr3g0078391 | 25.378 | 331 | 205 | 16 | 4 | 323 | 47 | 346 | 1.33e-16 | 81.3 |
| Msa1090380 | MtrunA17_Chr1g0176891 | 25.444 | 338 | 184 | 15 | 1 | 316 | 1 | 292 | 1.35e-16 | 80.9 |
| Msa1090380 | MtrunA17_Chr2g0303021 | 25.617 | 324 | 194 | 12 | 4 | 316 | 28 | 315 | 1.47e-16 | 80.9 |
| Msa1090380 | MtrunA17_Chr6g0454491 | 25.758 | 330 | 196 | 13 | 4 | 323 | 26 | 316 | 2.22e-16 | 80.5 |
| Msa1090380 | MtrunA17_Chr3g0078471 | 26.012 | 346 | 203 | 14 | 7 | 341 | 46 | 349 | 2.53e-16 | 80.1 |
| Msa1090380 | MtrunA17_Chr1g0176691 | 24.053 | 449 | 240 | 16 | 3 | 388 | 9 | 419 | 2.72e-16 | 80.1 |
| Msa1090380 | MtrunA17_Chr6g0470191 | 25.600 | 375 | 218 | 17 | 1 | 358 | 25 | 355 | 3.35e-16 | 79.7 |
| Msa1090380 | MtrunA17_Chr8g0350891 | 22.664 | 428 | 253 | 16 | 3 | 379 | 15 | 415 | 3.35e-16 | 80.1 |
| Msa1090380 | MtrunA17_Chr6g0450771 | 27.666 | 347 | 197 | 13 | 4 | 336 | 26 | 332 | 4.14e-16 | 79.3 |
| Msa1090380 | MtrunA17_Chr1g0155881 | 23.545 | 378 | 226 | 14 | 3 | 362 | 31 | 363 | 4.16e-16 | 79.3 |
| Msa1090380 | MtrunA17_Chr6g0485611 | 23.210 | 405 | 232 | 18 | 3 | 382 | 69 | 419 | 4.31e-16 | 79.7 |
| Msa1090380 | MtrunA17_Chr5g0419931 | 25.816 | 337 | 185 | 14 | 1 | 323 | 1 | 286 | 4.42e-16 | 79.0 |
| Msa1090380 | MtrunA17_Chr2g0287591 | 23.798 | 416 | 263 | 18 | 3 | 382 | 15 | 412 | 4.95e-16 | 79.3 |
| Msa1090380 | MtrunA17_Chr3g0088911 | 25.305 | 328 | 200 | 14 | 1 | 323 | 32 | 319 | 4.96e-16 | 79.3 |
| Msa1090380 | MtrunA17_Chr4g0030261 | 23.298 | 382 | 217 | 14 | 1 | 350 | 23 | 360 | 5.11e-16 | 79.0 |
| Msa1090380 | MtrunA17_Chr1g0201221 | 26.647 | 334 | 177 | 16 | 2 | 322 | 34 | 312 | 5.18e-16 | 79.0 |
| Msa1090380 | MtrunA17_Chr2g0290061 | 26.409 | 337 | 196 | 15 | 2 | 320 | 4 | 306 | 6.59e-16 | 79.0 |
| Msa1090380 | MtrunA17_Chr3g0088881 | 25.683 | 366 | 211 | 14 | 4 | 362 | 37 | 348 | 8.28e-16 | 78.6 |
| Msa1090380 | MtrunA17_Chr3g0101941 | 28.777 | 278 | 157 | 12 | 1 | 265 | 36 | 285 | 8.34e-16 | 77.8 |
| Msa1090380 | MtrunA17_Chr2g0290021 | 24.603 | 378 | 220 | 13 | 5 | 351 | 7 | 350 | 9.91e-16 | 78.6 |
| Msa1090380 | MtrunA17_Chr6g0474051 | 24.297 | 391 | 229 | 15 | 4 | 351 | 48 | 414 | 1.11e-15 | 78.6 |
| Msa1090380 | MtrunA17_Chr6g0449371 | 23.500 | 400 | 246 | 14 | 4 | 379 | 16 | 379 | 1.14e-15 | 78.2 |
| Msa1090380 | MtrunA17_Chr4g0066041 | 25.552 | 317 | 203 | 10 | 1 | 316 | 8 | 292 | 1.26e-15 | 77.8 |
| Msa1090380 | MtrunA17_Chr2g0290041 | 26.146 | 371 | 216 | 16 | 7 | 351 | 9 | 347 | 1.54e-15 | 77.8 |
| Msa1090380 | MtrunA17_Chr4g0065911 | 24.433 | 397 | 224 | 15 | 3 | 381 | 16 | 354 | 2.38e-15 | 77.0 |
| Msa1090380 | MtrunA17_Chr2g0291141 | 25.000 | 348 | 197 | 13 | 4 | 322 | 5 | 317 | 2.58e-15 | 77.4 |
| Msa1090380 | MtrunA17_Chr5g0447481 | 24.228 | 421 | 255 | 16 | 2 | 383 | 11 | 406 | 2.87e-15 | 77.0 |
| Msa1090380 | MtrunA17_Chr5g0447811 | 24.641 | 418 | 252 | 20 | 3 | 373 | 16 | 417 | 3.24e-15 | 77.0 |
| Msa1090380 | MtrunA17_Chr5g0447071 | 25.776 | 419 | 248 | 18 | 3 | 382 | 17 | 411 | 3.57e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr8g0364191 | 23.716 | 409 | 228 | 19 | 4 | 379 | 22 | 379 | 3.78e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr5g0424381 | 25.326 | 383 | 236 | 15 | 3 | 351 | 25 | 391 | 4.27e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr1g0173631 | 25.602 | 332 | 205 | 18 | 4 | 323 | 13 | 314 | 4.58e-15 | 76.3 |
| Msa1090380 | MtrunA17_Chr4g0012771 | 23.601 | 411 | 249 | 17 | 3 | 373 | 15 | 400 | 4.83e-15 | 76.3 |
| Msa1090380 | MtrunA17_Chr5g0429701 | 23.472 | 409 | 253 | 15 | 3 | 384 | 6 | 381 | 4.87e-15 | 76.3 |
| Msa1090380 | MtrunA17_Chr5g0409701 | 23.720 | 371 | 231 | 12 | 8 | 353 | 44 | 387 | 5.03e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr5g0409661 | 23.720 | 371 | 231 | 12 | 8 | 353 | 44 | 387 | 5.12e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr6g0483081 | 23.058 | 399 | 269 | 13 | 3 | 383 | 16 | 394 | 5.82e-15 | 76.3 |
| Msa1090380 | MtrunA17_Chr1g0201051 | 24.422 | 389 | 217 | 18 | 4 | 367 | 16 | 352 | 5.96e-15 | 75.9 |
| Msa1090380 | MtrunA17_Chr6g0487431 | 23.472 | 409 | 259 | 15 | 2 | 378 | 104 | 490 | 6.09e-15 | 76.6 |
| Msa1090380 | MtrunA17_Chr4g0068131 | 30.918 | 207 | 123 | 7 | 3 | 205 | 10 | 200 | 6.92e-15 | 75.1 |
| Msa1090380 | MtrunA17_Chr5g0419921 | 25.680 | 331 | 193 | 14 | 1 | 323 | 1 | 286 | 7.15e-15 | 75.5 |
| Msa1090380 | MtrunA17_Chr6g0483001 | 24.810 | 395 | 250 | 18 | 3 | 377 | 16 | 383 | 8.24e-15 | 75.5 |
| Msa1090380 | MtrunA17_Chr4g0066111 | 27.358 | 212 | 124 | 7 | 1 | 210 | 6 | 189 | 8.76e-15 | 73.2 |
| Msa1090380 | MtrunA17_Chr2g0289621 | 28.161 | 348 | 188 | 17 | 4 | 320 | 6 | 322 | 8.88e-15 | 75.5 |
| Msa1090380 | MtrunA17_Chr4g0010631 | 25.249 | 301 | 182 | 14 | 19 | 316 | 25 | 285 | 1.29e-14 | 74.7 |
| Msa1090380 | MtrunA17_Chr4g0010611 | 24.041 | 391 | 249 | 16 | 3 | 386 | 9 | 358 | 1.35e-14 | 74.7 |
| Msa1090380 | MtrunA17_Chr2g0310641 | 25.419 | 358 | 231 | 14 | 3 | 345 | 11 | 347 | 1.43e-14 | 74.7 |
| Msa1090380 | MtrunA17_Chr5g0415621 | 24.691 | 405 | 252 | 19 | 3 | 382 | 7 | 383 | 1.76e-14 | 74.7 |
| Msa1090380 | MtrunA17_Chr1g0212221 | 22.338 | 385 | 236 | 13 | 3 | 378 | 21 | 351 | 1.95e-14 | 74.3 |
| Msa1090380 | MtrunA17_Chr6g0481641 | 23.671 | 414 | 254 | 17 | 3 | 379 | 16 | 404 | 2.01e-14 | 74.3 |
| Msa1090380 | MtrunA17_Chr8g0353231 | 25.670 | 261 | 163 | 11 | 3 | 254 | 11 | 249 | 2.02e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr3g0080281 | 22.025 | 395 | 234 | 12 | 1 | 379 | 22 | 358 | 2.03e-14 | 74.3 |
| Msa1090380 | MtrunA17_Chr4g0066021 | 27.047 | 403 | 230 | 21 | 4 | 388 | 3 | 359 | 2.23e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr6g0471731 | 28.708 | 209 | 102 | 8 | 4 | 181 | 38 | 230 | 2.36e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr3g0080301 | 22.289 | 332 | 181 | 12 | 7 | 323 | 39 | 308 | 2.54e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr3g0086511 | 23.853 | 327 | 194 | 13 | 7 | 323 | 38 | 319 | 3.14e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr5g0405671 | 26.149 | 348 | 206 | 16 | 1 | 344 | 24 | 324 | 3.36e-14 | 73.6 |
| Msa1090380 | MtrunA17_Chr2g0289991 | 24.058 | 345 | 195 | 15 | 2 | 320 | 4 | 307 | 3.41e-14 | 73.9 |
| Msa1090380 | MtrunA17_Chr2g0289981 | 25.248 | 404 | 241 | 16 | 4 | 379 | 5 | 375 | 4.47e-14 | 73.6 |
| Msa1090380 | MtrunA17_Chr4g0027401 | 25.549 | 364 | 226 | 16 | 3 | 340 | 13 | 357 | 4.60e-14 | 73.2 |
| Msa1090380 | MtrunA17_Chr1g0176581 | 28.899 | 218 | 132 | 7 | 1 | 206 | 107 | 313 | 5.31e-14 | 73.6 |
| Msa1090380 | MtrunA17_Chr4g0015211 | 23.739 | 337 | 198 | 15 | 4 | 316 | 27 | 328 | 5.90e-14 | 73.2 |
| Msa1090380 | MtrunA17_Chr3g0078161 | 23.940 | 401 | 231 | 14 | 4 | 379 | 17 | 368 | 5.91e-14 | 72.8 |
| Msa1090380 | MtrunA17_Chr2g0287581 | 24.623 | 398 | 246 | 17 | 1 | 365 | 13 | 389 | 6.73e-14 | 72.8 |
| Msa1090380 | MtrunA17_Chr4g0051031 | 26.336 | 262 | 164 | 10 | 3 | 262 | 7 | 241 | 8.07e-14 | 72.4 |
| Msa1090380 | MtrunA17_Chr3g0101891 | 27.857 | 280 | 155 | 11 | 1 | 265 | 32 | 279 | 1.06e-13 | 72.0 |
| Msa1090380 | MtrunA17_Chr7g0236761 | 25.610 | 328 | 208 | 15 | 4 | 316 | 23 | 329 | 1.13e-13 | 72.0 |
| Msa1090380 | MtrunA17_Chr1g0177191 | 23.926 | 326 | 196 | 12 | 1 | 316 | 31 | 314 | 1.21e-13 | 72.0 |
| Msa1090380 | MtrunA17_Chr4g0035241 | 24.390 | 328 | 208 | 10 | 4 | 314 | 5 | 309 | 1.42e-13 | 71.6 |
| Msa1090380 | MtrunA17_Chr1g0211351 | 23.164 | 354 | 187 | 14 | 4 | 348 | 25 | 302 | 1.51e-13 | 71.2 |
| Msa1090380 | MtrunA17_Chr1g0169051 | 26.230 | 366 | 229 | 16 | 3 | 355 | 16 | 353 | 1.79e-13 | 71.6 |
| Msa1090380 | MtrunA17_Chr2g0290011 | 25.797 | 345 | 190 | 16 | 4 | 320 | 6 | 312 | 2.54e-13 | 71.2 |
| Msa1090380 | MtrunA17_Chr8g0356061 | 24.937 | 397 | 255 | 19 | 1 | 385 | 13 | 378 | 2.77e-13 | 70.9 |
| Msa1090380 | MtrunA17_Chr2g0293971 | 21.393 | 402 | 255 | 14 | 4 | 394 | 9 | 360 | 3.58e-13 | 70.5 |
| Msa1090380 | MtrunA17_Chr1g0146541 | 24.242 | 396 | 263 | 16 | 4 | 379 | 12 | 390 | 4.01e-13 | 70.5 |
| Msa1090380 | MtrunA17_Chr2g0303011 | 23.692 | 325 | 196 | 11 | 4 | 316 | 28 | 312 | 5.15e-13 | 70.1 |
| Msa1090380 | MtrunA17_Chr4g0073581 | 24.194 | 372 | 231 | 15 | 3 | 348 | 6 | 352 | 5.64e-13 | 70.1 |
| Msa1090380 | MtrunA17_Chr1g0201191 | 29.714 | 175 | 95 | 7 | 2 | 169 | 47 | 200 | 8.91e-13 | 69.3 |
| Msa1090380 | MtrunA17_Chr5g0418511 | 25.632 | 277 | 158 | 12 | 95 | 351 | 67 | 315 | 9.15e-13 | 69.3 |
| Msa1090380 | MtrunA17_Chr2g0294741 | 26.823 | 384 | 220 | 21 | 3 | 365 | 13 | 356 | 1.01e-12 | 68.9 |
| Msa1090380 | MtrunA17_Chr1g0171401 | 23.418 | 316 | 193 | 11 | 4 | 314 | 58 | 329 | 1.05e-12 | 69.3 |
| Msa1090380 | MtrunA17_Chr6g0481681 | 21.875 | 416 | 266 | 13 | 3 | 379 | 16 | 411 | 1.09e-12 | 69.3 |
| Msa1090380 | MtrunA17_Chr5g0447281 | 25.824 | 364 | 234 | 13 | 3 | 351 | 16 | 358 | 1.17e-12 | 68.9 |
| Msa1090380 | MtrunA17_Chr6g0477501 | 22.353 | 425 | 250 | 13 | 3 | 382 | 16 | 405 | 1.69e-12 | 68.6 |
| Msa1090380 | MtrunA17_Chr3g0086441 | 22.000 | 400 | 243 | 12 | 1 | 379 | 31 | 382 | 1.75e-12 | 68.6 |
| Msa1090380 | MtrunA17_Chr3g0114671 | 22.432 | 370 | 222 | 14 | 4 | 340 | 19 | 356 | 1.78e-12 | 68.6 |
| Msa1090380 | MtrunA17_Chr5g0429561 | 23.056 | 373 | 211 | 15 | 4 | 349 | 6 | 329 | 1.83e-12 | 68.2 |
| Msa1090380 | MtrunA17_Chr3g0101931 | 25.301 | 332 | 178 | 13 | 1 | 322 | 34 | 305 | 2.27e-12 | 68.2 |
| Msa1090380 | MtrunA17_Chr1g0169071 | 23.691 | 363 | 242 | 12 | 3 | 355 | 16 | 353 | 2.39e-12 | 68.2 |
| Msa1090380 | MtrunA17_Chr2g0291161 | 23.235 | 340 | 211 | 14 | 4 | 320 | 5 | 317 | 3.90e-12 | 67.4 |
| Msa1090380 | MtrunA17_Chr5g0426631 | 25.830 | 271 | 162 | 13 | 130 | 373 | 102 | 360 | 4.34e-12 | 67.0 |
| Msa1090380 | MtrunA17_Chr2g0287491 | 25.333 | 375 | 231 | 17 | 7 | 349 | 15 | 372 | 4.86e-12 | 67.0 |
| Msa1090380 | MtrunA17_Chr2g0310541 | 22.826 | 368 | 241 | 15 | 3 | 351 | 11 | 354 | 5.14e-12 | 67.0 |
| Msa1090380 | MtrunA17_Chr6g0449051 | 25.000 | 352 | 193 | 17 | 15 | 334 | 36 | 348 | 5.22e-12 | 67.0 |
| Msa1090380 | MtrunA17_Chr7g0235411 | 25.387 | 323 | 185 | 15 | 7 | 314 | 24 | 305 | 6.89e-12 | 66.6 |
| Msa1090380 | MtrunA17_Chr2g0287201 | 27.273 | 220 | 129 | 9 | 7 | 218 | 59 | 255 | 7.58e-12 | 65.1 |
| Msa1090380 | MtrunA17_Chr6g0481631 | 22.604 | 407 | 258 | 16 | 3 | 379 | 26 | 405 | 8.74e-12 | 66.6 |
| Msa1090380 | MtrunA17_Chr7g0249121 | 23.784 | 370 | 226 | 19 | 1 | 351 | 10 | 342 | 8.97e-12 | 66.2 |
| Msa1090380 | MtrunA17_Chr6g0457181 | 22.590 | 332 | 206 | 12 | 4 | 316 | 9 | 308 | 9.39e-12 | 66.2 |
| Msa1090380 | MtrunA17_Chr1g0211571 | 24.465 | 327 | 193 | 14 | 4 | 320 | 9 | 291 | 1.17e-11 | 65.9 |
| Msa1090380 | MtrunA17_Chr7g0238881 | 25.444 | 338 | 185 | 20 | 4 | 316 | 24 | 319 | 1.25e-11 | 65.9 |
| Msa1090380 | MtrunA17_Chr8g0389201 | 24.159 | 327 | 195 | 12 | 1 | 316 | 42 | 326 | 1.27e-11 | 65.9 |
| Msa1090380 | MtrunA17_Chr7g0236781 | 25.526 | 333 | 198 | 13 | 4 | 315 | 23 | 326 | 1.32e-11 | 65.9 |
| Msa1090380 | MtrunA17_Chr1g0169751 | 25.000 | 336 | 174 | 14 | 4 | 308 | 22 | 310 | 1.41e-11 | 65.5 |
| Msa1090380 | MtrunA17_Chr4g0010741 | 25.424 | 236 | 140 | 10 | 1 | 229 | 15 | 221 | 1.84e-11 | 65.1 |
| Msa1090380 | MtrunA17_Chr3g0086121 | 29.775 | 178 | 101 | 7 | 1 | 172 | 46 | 205 | 1.98e-11 | 65.1 |
| Msa1090380 | MtrunA17_Chr5g0447131 | 25.581 | 344 | 189 | 17 | 4 | 321 | 23 | 325 | 2.03e-11 | 65.1 |
| Msa1090380 | MtrunA17_Chr7g0247961 | 24.432 | 352 | 197 | 15 | 1 | 316 | 28 | 346 | 2.03e-11 | 65.5 |
| Msa1090380 | MtrunA17_Chr6g0477491 | 22.871 | 411 | 263 | 15 | 3 | 382 | 16 | 403 | 2.60e-11 | 65.1 |
| Msa1090380 | MtrunA17_Chr1g0175981 | 23.511 | 319 | 191 | 11 | 4 | 314 | 52 | 325 | 2.80e-11 | 64.7 |
| Msa1090380 | MtrunA17_Chr3g0080201 | 26.728 | 217 | 127 | 8 | 1 | 208 | 33 | 226 | 3.63e-11 | 63.2 |
| Msa1090380 | MtrunA17_Chr7g0241011 | 21.239 | 339 | 216 | 10 | 4 | 321 | 25 | 333 | 3.75e-11 | 64.3 |
| Msa1090380 | MtrunA17_Chr4g0066011 | 22.997 | 287 | 193 | 9 | 108 | 384 | 105 | 373 | 4.31e-11 | 63.9 |
| Msa1090380 | MtrunA17_Chr7g0236821 | 23.380 | 355 | 216 | 15 | 4 | 332 | 26 | 350 | 5.69e-11 | 63.9 |
| Msa1090380 | MtrunA17_Chr7g0220331 | 27.507 | 349 | 207 | 19 | 4 | 330 | 18 | 342 | 6.35e-11 | 63.5 |
| Msa1090380 | MtrunA17_Chr4g0006491 | 25.322 | 233 | 134 | 9 | 129 | 349 | 1 | 205 | 6.37e-11 | 62.8 |
| Msa1090380 | MtrunA17_Chr4g0013691 | 23.494 | 332 | 191 | 15 | 4 | 308 | 9 | 304 | 7.32e-11 | 63.2 |
| Msa1090380 | MtrunA17_Chr4g0004041 | 24.928 | 345 | 198 | 17 | 4 | 314 | 19 | 336 | 7.88e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1090380 | AT4G12560.1 | 23.762 | 404 | 257 | 13 | 1 | 384 | 1 | 373 | 5.15e-19 | 89.0 |
| Msa1090380 | AT4G12560.2 | 23.762 | 404 | 257 | 13 | 1 | 384 | 1 | 373 | 5.15e-19 | 89.0 |
| Msa1090380 | AT4G12560.3 | 23.762 | 404 | 257 | 13 | 1 | 384 | 1 | 373 | 5.15e-19 | 89.0 |
| Msa1090380 | AT3G06240.1 | 25.060 | 415 | 240 | 15 | 4 | 379 | 36 | 418 | 2.99e-18 | 86.7 |
| Msa1090380 | AT3G23880.1 | 23.442 | 337 | 208 | 13 | 3 | 330 | 13 | 308 | 1.71e-13 | 71.6 |
Find 71 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTTCCTATTGAAATTTC+AGG | 0.146504 | 7_3:+4738164 | Msa1090380:CDS |
| CTTACATTTCTCTTCTTTCT+TGG | 0.190630 | 7_3:+4737757 | Msa1090380:CDS |
| CATTTCTCATTTCCTCTTAC+AGG | 0.198823 | 7_3:-4738410 | None:intergenic |
| ATAGGCTATTCTCGTATTTC+AGG | 0.211161 | 7_3:+4738326 | Msa1090380:CDS |
| ATAGTCTTAATTCTAATTCT+TGG | 0.218610 | 7_3:+4738117 | Msa1090380:CDS |
| CCAATGATTTCTAAGTTTAT+TGG | 0.223880 | 7_3:+4738506 | Msa1090380:CDS |
| CATTTCAACAATTCTCTTGA+TGG | 0.226419 | 7_3:-4737585 | None:intergenic |
| AGAAGAAGAAACATGTGTTT+TGG | 0.247807 | 7_3:-4737793 | None:intergenic |
| TTTGGGTGATGAAAGATTAT+TGG | 0.255893 | 7_3:+4738441 | Msa1090380:CDS |
| GAATCCTTTAGAAAGATAAA+AGG | 0.276450 | 7_3:+4738296 | Msa1090380:CDS |
| CAATGATTTCTAAGTTTATT+GGG | 0.282641 | 7_3:+4738507 | Msa1090380:CDS |
| AATACAGATGAAAGACAAAA+AGG | 0.287073 | 7_3:+4738074 | Msa1090380:CDS |
| ATGGTATTAGATTCGTTAAA+TGG | 0.289899 | 7_3:-4738371 | None:intergenic |
| TATAAGAGCTGTTAAATATA+TGG | 0.296500 | 7_3:+4738640 | Msa1090380:CDS |
| ATTCGCCGGCCATTTATTTC+CGG | 0.301406 | 7_3:+4737726 | Msa1090380:CDS |
| GAAGGGTTCATCATGAGATT+TGG | 0.303554 | 7_3:-4737909 | None:intergenic |
| AAATCTGTCAAATGAGATTC+AGG | 0.304592 | 7_3:-4737954 | None:intergenic |
| ATGAGAAATGCTTTGATGTT+TGG | 0.312135 | 7_3:+4738423 | Msa1090380:CDS |
| AAGATAAAAGGGCCCGAAAT+AGG | 0.313565 | 7_3:+4738308 | Msa1090380:CDS |
| ACGATTCAGATCACAAATAT+TGG | 0.314130 | 7_3:+4737838 | Msa1090380:CDS |
| ATTATTGGGATGAAGGTTCT+TGG | 0.319924 | 7_3:+4738456 | Msa1090380:CDS |
| ATACGAGAATAGCCTATTTC+GGG | 0.326971 | 7_3:-4738320 | None:intergenic |
| TGAGAAATGCTTTGATGTTT+GGG | 0.345890 | 7_3:+4738424 | Msa1090380:CDS |
| GTGATCTGAATCGTATTTAT+CGG | 0.345995 | 7_3:-4737829 | None:intergenic |
| AATACGAGAATAGCCTATTT+CGG | 0.347275 | 7_3:-4738321 | None:intergenic |
| TGAAAATAGAAAGGATCTTC+AGG | 0.349638 | 7_3:+4738598 | Msa1090380:CDS |
| CCCTTCTTTGAGACAATTCA+AGG | 0.356594 | 7_3:+4737926 | Msa1090380:CDS |
| TGGGGTTGTGTTGATAAATA+TGG | 0.369459 | 7_3:+4738233 | Msa1090380:CDS |
| CAAATATTGGACTGAAATCA+TGG | 0.379867 | 7_3:+4737851 | Msa1090380:CDS |
| TTGGGTGATGAAAGATTATT+GGG | 0.410457 | 7_3:+4738442 | Msa1090380:CDS |
| AATGGCATTTACTTTCTTCA+AGG | 0.411033 | 7_3:+4737882 | Msa1090380:CDS |
| AGAAAGGATCTTCAGGTTTG+TGG | 0.417594 | 7_3:+4738605 | Msa1090380:CDS |
| GATGAACCTGAAATTTCAAT+AGG | 0.430836 | 7_3:-4738170 | None:intergenic |
| GCTATTGTTTACCCTGTAAG+AGG | 0.433092 | 7_3:+4738398 | Msa1090380:CDS |
| TCTCTAATAAGTAGATGATC+TGG | 0.439465 | 7_3:-4738728 | None:intergenic |
| ATGAAAGATTATTGGGATGA+AGG | 0.439518 | 7_3:+4738449 | Msa1090380:CDS |
| GCCTTGAATTGTCTCAAAGA+AGG | 0.449363 | 7_3:-4737927 | None:intergenic |
| CAACTATTGTACTCATTGGT+GGG | 0.459768 | 7_3:+4738214 | Msa1090380:CDS |
| CCAATAAACTTAGAAATCAT+TGG | 0.460441 | 7_3:-4738506 | None:intergenic |
| AATTTCAGGTTCATCGTCTC+GGG | 0.461375 | 7_3:+4738178 | Msa1090380:CDS |
| TGATCTGAATCGTATTTATC+GGG | 0.466879 | 7_3:-4737828 | None:intergenic |
| GCAAGTGTGTTTGCAAATCC+TGG | 0.473871 | 7_3:+4737607 | Msa1090380:CDS |
| AAATTTCAGGTTCATCGTCT+CGG | 0.475851 | 7_3:+4738177 | Msa1090380:CDS |
| ATGTCAACTATTGTACTCAT+TGG | 0.476954 | 7_3:+4738210 | Msa1090380:CDS |
| TATTTACTCTCAAAACCAAC+AGG | 0.481928 | 7_3:+4737689 | Msa1090380:CDS |
| TAACCAAGAGATTCTCCTGT+TGG | 0.501892 | 7_3:-4737704 | None:intergenic |
| TTGTTGTGCTAAGAGACATT+TGG | 0.502802 | 7_3:+4738045 | Msa1090380:CDS |
| ATCAGTTATGAGATTGAACC+AGG | 0.502914 | 7_3:-4737625 | None:intergenic |
| TGGATAAAGCAATACAGTGT+TGG | 0.505497 | 7_3:+4738476 | Msa1090380:CDS |
| CCTTGAATTGTCTCAAAGAA+GGG | 0.511030 | 7_3:-4737926 | None:intergenic |
| AAACCAACAGGAGAATCTCT+TGG | 0.511051 | 7_3:+4737701 | Msa1090380:CDS |
| AATCCTTTAGAAAGATAAAA+GGG | 0.512355 | 7_3:+4738297 | Msa1090380:CDS |
| GAAATCATGGGTCCATGTAA+TGG | 0.515800 | 7_3:+4737864 | Msa1090380:CDS |
| CCTGAAATTTCAATAGGAAG+AGG | 0.533030 | 7_3:-4738164 | None:intergenic |
| CTGAATCGTATTTATCGGGA+AGG | 0.539165 | 7_3:-4737824 | None:intergenic |
| TAGATTCGTTAAATGGTGCA+AGG | 0.542998 | 7_3:-4738364 | None:intergenic |
| AGAAAGTAAATGCCATTACA+TGG | 0.544982 | 7_3:-4737876 | None:intergenic |
| TCAACTATTGTACTCATTGG+TGG | 0.547536 | 7_3:+4738213 | Msa1090380:CDS |
| AGATTCGTTAAATGGTGCAA+GGG | 0.547545 | 7_3:-4738363 | None:intergenic |
| TAGTATCCAACATTCTATCA+AGG | 0.556628 | 7_3:+4737559 | Msa1090380:CDS |
| AGAATCTCTTGGTTATTCGC+CGG | 0.557511 | 7_3:+4737712 | Msa1090380:CDS |
| ATTTCTCATTTCCTCTTACA+GGG | 0.557687 | 7_3:-4738409 | None:intergenic |
| TTTAACGAATCTAATACCAT+TGG | 0.559004 | 7_3:+4738374 | Msa1090380:CDS |
| ATGTTGGATACTACTTCTTG+TGG | 0.561243 | 7_3:-4737549 | None:intergenic |
| AACTATTGTACTCATTGGTG+GGG | 0.561494 | 7_3:+4738215 | Msa1090380:CDS |
| GCCTGAGTATGAAAATAGAA+AGG | 0.567124 | 7_3:+4738589 | Msa1090380:CDS |
| TAGTAATTGGAAATAAAATG+AGG | 0.585840 | 7_3:-4737648 | None:intergenic |
| AGGGTAAACAATAGCACCAA+TGG | 0.588617 | 7_3:-4738390 | None:intergenic |
| TGGCAACCTTGATAGAATGT+TGG | 0.589397 | 7_3:-4737565 | None:intergenic |
| AAATATTGGACTGAAATCAT+GGG | 0.607036 | 7_3:+4737852 | Msa1090380:CDS |
| TTATGCCGGAAATAAATGGC+CGG | 0.611523 | 7_3:-4737731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAAAAAAGATAGTAAT+TGG | - | chr7_3:4737664-4737683 | None:intergenic | 15.0% |
| !!! | ATTTTATAGTCATTAGTTTT+CGG | - | chr7_3:4738026-4738045 | None:intergenic | 15.0% |
| !! | GTTATAAAAAAGATAGTAAT+TGG | - | chr7_3:4737664-4737683 | None:intergenic | 15.0% |
| !!! | ATTTTATAGTCATTAGTTTT+CGG | - | chr7_3:4738026-4738045 | None:intergenic | 15.0% |
| !! | TAGTAATTGGAAATAAAATG+AGG | - | chr7_3:4737651-4737670 | None:intergenic | 20.0% |
| !!! | TTTTATAGTCATTAGTTTTC+GGG | - | chr7_3:4738025-4738044 | None:intergenic | 20.0% |
| !!! | ATAGTCTTAATTCTAATTCT+TGG | + | chr7_3:4738117-4738136 | Msa1090380:CDS | 20.0% |
| !!! | AATCCTTTAGAAAGATAAAA+GGG | + | chr7_3:4738297-4738316 | Msa1090380:CDS | 20.0% |
| !! | CAATGATTTCTAAGTTTATT+GGG | + | chr7_3:4738507-4738526 | Msa1090380:CDS | 20.0% |
| !! | CAAAGATAAAAATGAAAAGT+TGG | + | chr7_3:4738556-4738575 | Msa1090380:CDS | 20.0% |
| !! | TATAAGAGCTGTTAAATATA+TGG | + | chr7_3:4738640-4738659 | Msa1090380:CDS | 20.0% |
| !! | TAGTAATTGGAAATAAAATG+AGG | - | chr7_3:4737651-4737670 | None:intergenic | 20.0% |
| !!! | TTTTATAGTCATTAGTTTTC+GGG | - | chr7_3:4738025-4738044 | None:intergenic | 20.0% |
| !!! | ATAGTCTTAATTCTAATTCT+TGG | + | chr7_3:4738117-4738136 | Msa1090380:CDS | 20.0% |
| !!! | AATCCTTTAGAAAGATAAAA+GGG | + | chr7_3:4738297-4738316 | Msa1090380:CDS | 20.0% |
| !! | CAATGATTTCTAAGTTTATT+GGG | + | chr7_3:4738507-4738526 | Msa1090380:CDS | 20.0% |
| !! | CAAAGATAAAAATGAAAAGT+TGG | + | chr7_3:4738556-4738575 | Msa1090380:CDS | 20.0% |
| !! | TATAAGAGCTGTTAAATATA+TGG | + | chr7_3:4738640-4738659 | Msa1090380:CDS | 20.0% |
| !! | AGAAATGTAAGTTTTTATGC+CGG | - | chr7_3:4737748-4737767 | None:intergenic | 25.0% |
| ! | AAATATTGGACTGAAATCAT+GGG | + | chr7_3:4737852-4737871 | Msa1090380:CDS | 25.0% |
| ! | AATACAGATGAAAGACAAAA+AGG | + | chr7_3:4738074-4738093 | Msa1090380:CDS | 25.0% |
| ! | ATACAGATGAAAGACAAAAA+GGG | + | chr7_3:4738075-4738094 | Msa1090380:CDS | 25.0% |
| !! | GAATCCTTTAGAAAGATAAA+AGG | + | chr7_3:4738296-4738315 | Msa1090380:CDS | 25.0% |
| ! | ATGGTATTAGATTCGTTAAA+TGG | - | chr7_3:4738374-4738393 | None:intergenic | 25.0% |
| ! | TTTAACGAATCTAATACCAT+TGG | + | chr7_3:4738374-4738393 | Msa1090380:CDS | 25.0% |
| ! | CCAATAAACTTAGAAATCAT+TGG | - | chr7_3:4738509-4738528 | None:intergenic | 25.0% |
| ! | CCAATGATTTCTAAGTTTAT+TGG | + | chr7_3:4738506-4738525 | Msa1090380:CDS | 25.0% |
| !! | TCTAAGTTTATTGGGTTTTA+TGG | + | chr7_3:4738515-4738534 | Msa1090380:CDS | 25.0% |
| !! | AGAAATGTAAGTTTTTATGC+CGG | - | chr7_3:4737748-4737767 | None:intergenic | 25.0% |
| ! | AAATATTGGACTGAAATCAT+GGG | + | chr7_3:4737852-4737871 | Msa1090380:CDS | 25.0% |
| ! | AATACAGATGAAAGACAAAA+AGG | + | chr7_3:4738074-4738093 | Msa1090380:CDS | 25.0% |
| ! | ATACAGATGAAAGACAAAAA+GGG | + | chr7_3:4738075-4738094 | Msa1090380:CDS | 25.0% |
| !! | GAATCCTTTAGAAAGATAAA+AGG | + | chr7_3:4738296-4738315 | Msa1090380:CDS | 25.0% |
| ! | ATGGTATTAGATTCGTTAAA+TGG | - | chr7_3:4738374-4738393 | None:intergenic | 25.0% |
| ! | TTTAACGAATCTAATACCAT+TGG | + | chr7_3:4738374-4738393 | Msa1090380:CDS | 25.0% |
| ! | CCAATAAACTTAGAAATCAT+TGG | - | chr7_3:4738509-4738528 | None:intergenic | 25.0% |
| ! | CCAATGATTTCTAAGTTTAT+TGG | + | chr7_3:4738506-4738525 | Msa1090380:CDS | 25.0% |
| !! | TCTAAGTTTATTGGGTTTTA+TGG | + | chr7_3:4738515-4738534 | Msa1090380:CDS | 25.0% |
| TAGTATCCAACATTCTATCA+AGG | + | chr7_3:4737559-4737578 | Msa1090380:CDS | 30.0% | |
| CATTTCAACAATTCTCTTGA+TGG | - | chr7_3:4737588-4737607 | None:intergenic | 30.0% | |
| TATTTACTCTCAAAACCAAC+AGG | + | chr7_3:4737689-4737708 | Msa1090380:CDS | 30.0% | |
| ! | GTTTTTATGCCGGAAATAAA+TGG | - | chr7_3:4737738-4737757 | None:intergenic | 30.0% |
| CTTACATTTCTCTTCTTTCT+TGG | + | chr7_3:4737757-4737776 | Msa1090380:CDS | 30.0% | |
| ! | GAAGAAGAAACATGTGTTTT+GGG | - | chr7_3:4737795-4737814 | None:intergenic | 30.0% |
| ! | AGAAGAAGAAACATGTGTTT+TGG | - | chr7_3:4737796-4737815 | None:intergenic | 30.0% |
| TGATCTGAATCGTATTTATC+GGG | - | chr7_3:4737831-4737850 | None:intergenic | 30.0% | |
| GTGATCTGAATCGTATTTAT+CGG | - | chr7_3:4737832-4737851 | None:intergenic | 30.0% | |
| ACGATTCAGATCACAAATAT+TGG | + | chr7_3:4737838-4737857 | Msa1090380:CDS | 30.0% | |
| CAAATATTGGACTGAAATCA+TGG | + | chr7_3:4737851-4737870 | Msa1090380:CDS | 30.0% | |
| AGAAAGTAAATGCCATTACA+TGG | - | chr7_3:4737879-4737898 | None:intergenic | 30.0% | |
| AATGGCATTTACTTTCTTCA+AGG | + | chr7_3:4737882-4737901 | Msa1090380:CDS | 30.0% | |
| AAATCTGTCAAATGAGATTC+AGG | - | chr7_3:4737957-4737976 | None:intergenic | 30.0% | |
| GATGAACCTGAAATTTCAAT+AGG | - | chr7_3:4738173-4738192 | None:intergenic | 30.0% | |
| ATGTCAACTATTGTACTCAT+TGG | + | chr7_3:4738210-4738229 | Msa1090380:CDS | 30.0% | |
| !!! | TGTTGTTTTAGCATTCAACA+TGG | + | chr7_3:4738268-4738287 | Msa1090380:CDS | 30.0% |
| AATACGAGAATAGCCTATTT+CGG | - | chr7_3:4738324-4738343 | None:intergenic | 30.0% | |
| ATTTCTCATTTCCTCTTACA+GGG | - | chr7_3:4738412-4738431 | None:intergenic | 30.0% | |
| ATGAGAAATGCTTTGATGTT+TGG | + | chr7_3:4738423-4738442 | Msa1090380:CDS | 30.0% | |
| TGAGAAATGCTTTGATGTTT+GGG | + | chr7_3:4738424-4738443 | Msa1090380:CDS | 30.0% | |
| TTTGGGTGATGAAAGATTAT+TGG | + | chr7_3:4738441-4738460 | Msa1090380:CDS | 30.0% | |
| TTGGGTGATGAAAGATTATT+GGG | + | chr7_3:4738442-4738461 | Msa1090380:CDS | 30.0% | |
| ATGAAAGATTATTGGGATGA+AGG | + | chr7_3:4738449-4738468 | Msa1090380:CDS | 30.0% | |
| ! | TCCTTTCTATTTTCATACTC+AGG | - | chr7_3:4738593-4738612 | None:intergenic | 30.0% |
| TGAAAATAGAAAGGATCTTC+AGG | + | chr7_3:4738598-4738617 | Msa1090380:CDS | 30.0% | |
| !!! | AAAGTCTTGTTTTGCTTCAA+AGG | + | chr7_3:4738663-4738682 | Msa1090380:CDS | 30.0% |
| !!! | AAGTCTTGTTTTGCTTCAAA+GGG | + | chr7_3:4738664-4738683 | Msa1090380:CDS | 30.0% |
| TCTCTAATAAGTAGATGATC+TGG | - | chr7_3:4738731-4738750 | None:intergenic | 30.0% | |
| TAGTATCCAACATTCTATCA+AGG | + | chr7_3:4737559-4737578 | Msa1090380:CDS | 30.0% | |
| CATTTCAACAATTCTCTTGA+TGG | - | chr7_3:4737588-4737607 | None:intergenic | 30.0% | |
| TATTTACTCTCAAAACCAAC+AGG | + | chr7_3:4737689-4737708 | Msa1090380:CDS | 30.0% | |
| ! | GTTTTTATGCCGGAAATAAA+TGG | - | chr7_3:4737738-4737757 | None:intergenic | 30.0% |
| CTTACATTTCTCTTCTTTCT+TGG | + | chr7_3:4737757-4737776 | Msa1090380:CDS | 30.0% | |
| ! | GAAGAAGAAACATGTGTTTT+GGG | - | chr7_3:4737795-4737814 | None:intergenic | 30.0% |
| ! | AGAAGAAGAAACATGTGTTT+TGG | - | chr7_3:4737796-4737815 | None:intergenic | 30.0% |
| TGATCTGAATCGTATTTATC+GGG | - | chr7_3:4737831-4737850 | None:intergenic | 30.0% | |
| GTGATCTGAATCGTATTTAT+CGG | - | chr7_3:4737832-4737851 | None:intergenic | 30.0% | |
| ACGATTCAGATCACAAATAT+TGG | + | chr7_3:4737838-4737857 | Msa1090380:CDS | 30.0% | |
| CAAATATTGGACTGAAATCA+TGG | + | chr7_3:4737851-4737870 | Msa1090380:CDS | 30.0% | |
| AGAAAGTAAATGCCATTACA+TGG | - | chr7_3:4737879-4737898 | None:intergenic | 30.0% | |
| AATGGCATTTACTTTCTTCA+AGG | + | chr7_3:4737882-4737901 | Msa1090380:CDS | 30.0% | |
| AAATCTGTCAAATGAGATTC+AGG | - | chr7_3:4737957-4737976 | None:intergenic | 30.0% | |
| GATGAACCTGAAATTTCAAT+AGG | - | chr7_3:4738173-4738192 | None:intergenic | 30.0% | |
| ATGTCAACTATTGTACTCAT+TGG | + | chr7_3:4738210-4738229 | Msa1090380:CDS | 30.0% | |
| !!! | TGTTGTTTTAGCATTCAACA+TGG | + | chr7_3:4738268-4738287 | Msa1090380:CDS | 30.0% |
| AATACGAGAATAGCCTATTT+CGG | - | chr7_3:4738324-4738343 | None:intergenic | 30.0% | |
| ATTTCTCATTTCCTCTTACA+GGG | - | chr7_3:4738412-4738431 | None:intergenic | 30.0% | |
| ATGAGAAATGCTTTGATGTT+TGG | + | chr7_3:4738423-4738442 | Msa1090380:CDS | 30.0% | |
| TGAGAAATGCTTTGATGTTT+GGG | + | chr7_3:4738424-4738443 | Msa1090380:CDS | 30.0% | |
| TTTGGGTGATGAAAGATTAT+TGG | + | chr7_3:4738441-4738460 | Msa1090380:CDS | 30.0% | |
| TTGGGTGATGAAAGATTATT+GGG | + | chr7_3:4738442-4738461 | Msa1090380:CDS | 30.0% | |
| ATGAAAGATTATTGGGATGA+AGG | + | chr7_3:4738449-4738468 | Msa1090380:CDS | 30.0% | |
| ! | TCCTTTCTATTTTCATACTC+AGG | - | chr7_3:4738593-4738612 | None:intergenic | 30.0% |
| TGAAAATAGAAAGGATCTTC+AGG | + | chr7_3:4738598-4738617 | Msa1090380:CDS | 30.0% | |
| !!! | AAAGTCTTGTTTTGCTTCAA+AGG | + | chr7_3:4738663-4738682 | Msa1090380:CDS | 30.0% |
| !!! | AAGTCTTGTTTTGCTTCAAA+GGG | + | chr7_3:4738664-4738683 | Msa1090380:CDS | 30.0% |
| TCTCTAATAAGTAGATGATC+TGG | - | chr7_3:4738731-4738750 | None:intergenic | 30.0% | |
| ATGTTGGATACTACTTCTTG+TGG | - | chr7_3:4737552-4737571 | None:intergenic | 35.0% | |
| ATCAGTTATGAGATTGAACC+AGG | - | chr7_3:4737628-4737647 | None:intergenic | 35.0% | |
| CCTTGAATTGTCTCAAAGAA+GGG | - | chr7_3:4737929-4737948 | None:intergenic | 35.0% | |
| TTGTTGTGCTAAGAGACATT+TGG | + | chr7_3:4738045-4738064 | Msa1090380:CDS | 35.0% | |
| ! | ATGAAAGACAAAAAGGGCAT+TGG | + | chr7_3:4738081-4738100 | Msa1090380:CDS | 35.0% |
| CCTGAAATTTCAATAGGAAG+AGG | - | chr7_3:4738167-4738186 | None:intergenic | 35.0% | |
| CCTCTTCCTATTGAAATTTC+AGG | + | chr7_3:4738164-4738183 | Msa1090380:CDS | 35.0% | |
| !! | AAATTTCAGGTTCATCGTCT+CGG | + | chr7_3:4738177-4738196 | Msa1090380:CDS | 35.0% |
| TCAACTATTGTACTCATTGG+TGG | + | chr7_3:4738213-4738232 | Msa1090380:CDS | 35.0% | |
| CAACTATTGTACTCATTGGT+GGG | + | chr7_3:4738214-4738233 | Msa1090380:CDS | 35.0% | |
| AACTATTGTACTCATTGGTG+GGG | + | chr7_3:4738215-4738234 | Msa1090380:CDS | 35.0% | |
| ! | TGGGGTTGTGTTGATAAATA+TGG | + | chr7_3:4738233-4738252 | Msa1090380:CDS | 35.0% |
| ATACGAGAATAGCCTATTTC+GGG | - | chr7_3:4738323-4738342 | None:intergenic | 35.0% | |
| ATAGGCTATTCTCGTATTTC+AGG | + | chr7_3:4738326-4738345 | Msa1090380:CDS | 35.0% | |
| AGATTCGTTAAATGGTGCAA+GGG | - | chr7_3:4738366-4738385 | None:intergenic | 35.0% | |
| TAGATTCGTTAAATGGTGCA+AGG | - | chr7_3:4738367-4738386 | None:intergenic | 35.0% | |
| CATTTCTCATTTCCTCTTAC+AGG | - | chr7_3:4738413-4738432 | None:intergenic | 35.0% | |
| ATTATTGGGATGAAGGTTCT+TGG | + | chr7_3:4738456-4738475 | Msa1090380:CDS | 35.0% | |
| TGGATAAAGCAATACAGTGT+TGG | + | chr7_3:4738476-4738495 | Msa1090380:CDS | 35.0% | |
| GCCTGAGTATGAAAATAGAA+AGG | + | chr7_3:4738589-4738608 | Msa1090380:CDS | 35.0% | |
| !!! | AGTCTTGTTTTGCTTCAAAG+GGG | + | chr7_3:4738665-4738684 | Msa1090380:CDS | 35.0% |
| CCAACTTACAAGAAAAACAG+TGG | - | chr7_3:4738706-4738725 | None:intergenic | 35.0% | |
| !! | CCACTGTTTTTCTTGTAAGT+TGG | + | chr7_3:4738703-4738722 | Msa1090380:CDS | 35.0% |
| ATGTTGGATACTACTTCTTG+TGG | - | chr7_3:4737552-4737571 | None:intergenic | 35.0% | |
| ATCAGTTATGAGATTGAACC+AGG | - | chr7_3:4737628-4737647 | None:intergenic | 35.0% | |
| CCTTGAATTGTCTCAAAGAA+GGG | - | chr7_3:4737929-4737948 | None:intergenic | 35.0% | |
| TTGTTGTGCTAAGAGACATT+TGG | + | chr7_3:4738045-4738064 | Msa1090380:CDS | 35.0% | |
| ! | ATGAAAGACAAAAAGGGCAT+TGG | + | chr7_3:4738081-4738100 | Msa1090380:CDS | 35.0% |
| CCTGAAATTTCAATAGGAAG+AGG | - | chr7_3:4738167-4738186 | None:intergenic | 35.0% | |
| CCTCTTCCTATTGAAATTTC+AGG | + | chr7_3:4738164-4738183 | Msa1090380:CDS | 35.0% | |
| !! | AAATTTCAGGTTCATCGTCT+CGG | + | chr7_3:4738177-4738196 | Msa1090380:CDS | 35.0% |
| TCAACTATTGTACTCATTGG+TGG | + | chr7_3:4738213-4738232 | Msa1090380:CDS | 35.0% | |
| CAACTATTGTACTCATTGGT+GGG | + | chr7_3:4738214-4738233 | Msa1090380:CDS | 35.0% | |
| AACTATTGTACTCATTGGTG+GGG | + | chr7_3:4738215-4738234 | Msa1090380:CDS | 35.0% | |
| ! | TGGGGTTGTGTTGATAAATA+TGG | + | chr7_3:4738233-4738252 | Msa1090380:CDS | 35.0% |
| ATACGAGAATAGCCTATTTC+GGG | - | chr7_3:4738323-4738342 | None:intergenic | 35.0% | |
| ATAGGCTATTCTCGTATTTC+AGG | + | chr7_3:4738326-4738345 | Msa1090380:CDS | 35.0% | |
| AGATTCGTTAAATGGTGCAA+GGG | - | chr7_3:4738366-4738385 | None:intergenic | 35.0% | |
| TAGATTCGTTAAATGGTGCA+AGG | - | chr7_3:4738367-4738386 | None:intergenic | 35.0% | |
| CATTTCTCATTTCCTCTTAC+AGG | - | chr7_3:4738413-4738432 | None:intergenic | 35.0% | |
| ATTATTGGGATGAAGGTTCT+TGG | + | chr7_3:4738456-4738475 | Msa1090380:CDS | 35.0% | |
| TGGATAAAGCAATACAGTGT+TGG | + | chr7_3:4738476-4738495 | Msa1090380:CDS | 35.0% | |
| GCCTGAGTATGAAAATAGAA+AGG | + | chr7_3:4738589-4738608 | Msa1090380:CDS | 35.0% | |
| !!! | AGTCTTGTTTTGCTTCAAAG+GGG | + | chr7_3:4738665-4738684 | Msa1090380:CDS | 35.0% |
| CCAACTTACAAGAAAAACAG+TGG | - | chr7_3:4738706-4738725 | None:intergenic | 35.0% | |
| !! | CCACTGTTTTTCTTGTAAGT+TGG | + | chr7_3:4738703-4738722 | Msa1090380:CDS | 35.0% |
| TGGCAACCTTGATAGAATGT+TGG | - | chr7_3:4737568-4737587 | None:intergenic | 40.0% | |
| AAACCAACAGGAGAATCTCT+TGG | + | chr7_3:4737701-4737720 | Msa1090380:CDS | 40.0% | |
| TAACCAAGAGATTCTCCTGT+TGG | - | chr7_3:4737707-4737726 | None:intergenic | 40.0% | |
| AGAATCTCTTGGTTATTCGC+CGG | + | chr7_3:4737712-4737731 | Msa1090380:CDS | 40.0% | |
| TTATGCCGGAAATAAATGGC+CGG | - | chr7_3:4737734-4737753 | None:intergenic | 40.0% | |
| CTGAATCGTATTTATCGGGA+AGG | - | chr7_3:4737827-4737846 | None:intergenic | 40.0% | |
| GAAATCATGGGTCCATGTAA+TGG | + | chr7_3:4737864-4737883 | Msa1090380:CDS | 40.0% | |
| GAAGGGTTCATCATGAGATT+TGG | - | chr7_3:4737912-4737931 | None:intergenic | 40.0% | |
| !! | CCCTTCTTTGAGACAATTCA+AGG | + | chr7_3:4737926-4737945 | Msa1090380:CDS | 40.0% |
| GCCTTGAATTGTCTCAAAGA+AGG | - | chr7_3:4737930-4737949 | None:intergenic | 40.0% | |
| !!! | TATTCGCTCACTGATTTTGC+TGG | + | chr7_3:4737987-4738006 | Msa1090380:CDS | 40.0% |
| !!! | CTCACTGATTTTGCTGGATT+TGG | + | chr7_3:4737993-4738012 | Msa1090380:CDS | 40.0% |
| !! | AATTTCAGGTTCATCGTCTC+GGG | + | chr7_3:4738178-4738197 | Msa1090380:CDS | 40.0% |
| ! | GGGCCCTTTTATCTTTCTAA+AGG | - | chr7_3:4738303-4738322 | None:intergenic | 40.0% |
| AAGATAAAAGGGCCCGAAAT+AGG | + | chr7_3:4738308-4738327 | Msa1090380:CDS | 40.0% | |
| AGGGTAAACAATAGCACCAA+TGG | - | chr7_3:4738393-4738412 | None:intergenic | 40.0% | |
| GCTATTGTTTACCCTGTAAG+AGG | + | chr7_3:4738398-4738417 | Msa1090380:CDS | 40.0% | |
| ! | AGAAAGGATCTTCAGGTTTG+TGG | + | chr7_3:4738605-4738624 | Msa1090380:CDS | 40.0% |
| ! | TGTTTTGCTTCAAAGGGGAA+AGG | + | chr7_3:4738670-4738689 | Msa1090380:CDS | 40.0% |
| TGGCAACCTTGATAGAATGT+TGG | - | chr7_3:4737568-4737587 | None:intergenic | 40.0% | |
| AAACCAACAGGAGAATCTCT+TGG | + | chr7_3:4737701-4737720 | Msa1090380:CDS | 40.0% | |
| TAACCAAGAGATTCTCCTGT+TGG | - | chr7_3:4737707-4737726 | None:intergenic | 40.0% | |
| AGAATCTCTTGGTTATTCGC+CGG | + | chr7_3:4737712-4737731 | Msa1090380:CDS | 40.0% | |
| TTATGCCGGAAATAAATGGC+CGG | - | chr7_3:4737734-4737753 | None:intergenic | 40.0% | |
| CTGAATCGTATTTATCGGGA+AGG | - | chr7_3:4737827-4737846 | None:intergenic | 40.0% | |
| GAAATCATGGGTCCATGTAA+TGG | + | chr7_3:4737864-4737883 | Msa1090380:CDS | 40.0% | |
| GAAGGGTTCATCATGAGATT+TGG | - | chr7_3:4737912-4737931 | None:intergenic | 40.0% | |
| !! | CCCTTCTTTGAGACAATTCA+AGG | + | chr7_3:4737926-4737945 | Msa1090380:CDS | 40.0% |
| GCCTTGAATTGTCTCAAAGA+AGG | - | chr7_3:4737930-4737949 | None:intergenic | 40.0% | |
| !!! | TATTCGCTCACTGATTTTGC+TGG | + | chr7_3:4737987-4738006 | Msa1090380:CDS | 40.0% |
| !!! | CTCACTGATTTTGCTGGATT+TGG | + | chr7_3:4737993-4738012 | Msa1090380:CDS | 40.0% |
| !! | AATTTCAGGTTCATCGTCTC+GGG | + | chr7_3:4738178-4738197 | Msa1090380:CDS | 40.0% |
| ! | GGGCCCTTTTATCTTTCTAA+AGG | - | chr7_3:4738303-4738322 | None:intergenic | 40.0% |
| AAGATAAAAGGGCCCGAAAT+AGG | + | chr7_3:4738308-4738327 | Msa1090380:CDS | 40.0% | |
| AGGGTAAACAATAGCACCAA+TGG | - | chr7_3:4738393-4738412 | None:intergenic | 40.0% | |
| GCTATTGTTTACCCTGTAAG+AGG | + | chr7_3:4738398-4738417 | Msa1090380:CDS | 40.0% | |
| ! | AGAAAGGATCTTCAGGTTTG+TGG | + | chr7_3:4738605-4738624 | Msa1090380:CDS | 40.0% |
| ! | TGTTTTGCTTCAAAGGGGAA+AGG | + | chr7_3:4738670-4738689 | Msa1090380:CDS | 40.0% |
| GCAAGTGTGTTTGCAAATCC+TGG | + | chr7_3:4737607-4737626 | Msa1090380:CDS | 45.0% | |
| ATTCGCCGGCCATTTATTTC+CGG | + | chr7_3:4737726-4737745 | Msa1090380:CDS | 45.0% | |
| !! | ATTGGGTTTTATGGCAGCAG+TGG | + | chr7_3:4738524-4738543 | Msa1090380:CDS | 45.0% |
| GCAAGTGTGTTTGCAAATCC+TGG | + | chr7_3:4737607-4737626 | Msa1090380:CDS | 45.0% | |
| ATTCGCCGGCCATTTATTTC+CGG | + | chr7_3:4737726-4737745 | Msa1090380:CDS | 45.0% | |
| !! | ATTGGGTTTTATGGCAGCAG+TGG | + | chr7_3:4738524-4738543 | Msa1090380:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 4737537 | 4738763 | 4737537 | ID=Msa1090380;Name=Msa1090380 |
| chr7_3 | mRNA | 4737537 | 4738763 | 4737537 | ID=Msa1090380-mRNA-1;Parent=Msa1090380;Name=Msa1090380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|408 |
| chr7_3 | exon | 4737537 | 4738763 | 4737537 | ID=Msa1090380-mRNA-1:exon:1615;Parent=Msa1090380-mRNA-1 |
| chr7_3 | CDS | 4737537 | 4738763 | 4737537 | ID=Msa1090380-mRNA-1:cds;Parent=Msa1090380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
