AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1094530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1094530 MtrunA17_Chr7g0224051 90.383 1175 80 4 46 1217 1 1145 0.0 2175
Msa1094530 MtrunA17_Chr3g0114161 75.693 1226 238 14 20 1188 25 1247 0.0 1817
Msa1094530 MtrunA17_Chr1g0191141 69.283 879 246 11 322 1189 238 1103 0.0 1194
Msa1094530 MtrunA17_Chr1g0191141 57.031 256 98 5 20 268 8 258 2.76e-75 272
Msa1094530 MtrunA17_Chr5g0437621 63.097 859 282 13 355 1187 453 1302 0.0 1062
Msa1094530 MtrunA17_Chr5g0437621 44.954 327 150 8 4 313 3 316 1.68e-67 249
Msa1094530 MtrunA17_Chr7g0233021 36.490 718 389 22 478 1169 537 1213 7.52e-113 382
Msa1094530 MtrunA17_Chr7g0233031 33.691 745 418 19 460 1175 535 1232 2.34e-112 381
Msa1094530 MtrunA17_Chr7g0224031 80.822 219 40 2 751 968 25 242 1.47e-111 348
Msa1094530 MtrunA17_Chr7g0225791 33.378 752 440 17 460 1188 577 1290 2.51e-111 379
Msa1094530 MtrunA17_Chr7g0232971 33.376 773 441 21 445 1188 571 1298 1.80e-107 368
Msa1094530 MtrunA17_Chr4g0047081 33.699 730 428 15 478 1188 548 1240 2.30e-107 367
Msa1094530 MtrunA17_Chr7g0232991 32.964 631 357 15 595 1188 61 662 3.30e-93 314
Msa1094530 MtrunA17_Chr2g0296421 31.187 699 388 20 457 1144 385 1001 2.20e-88 309
Msa1094530 MtrunA17_Chr8g0352361 30.693 707 415 18 443 1144 216 852 4.31e-88 305
Msa1094530 MtrunA17_Chr7g0233001 32.907 547 328 12 657 1188 3 525 8.39e-76 261
Msa1094530 MtrunA17_Chr7g0224021 76.991 113 24 1 576 688 1 111 5.73e-54 184
Msa1094530 MtrunA17_Chr2g0320781 33.745 243 154 4 896 1137 4 240 2.13e-37 141
Msa1094530 MtrunA17_Chr5g0393461 23.134 670 381 24 569 1196 163 740 1.87e-31 133
Msa1094530 MtrunA17_Chr5g0403921 26.884 584 336 20 641 1209 206 713 2.53e-30 129
Msa1094530 MtrunA17_Chr8g0384531 25.129 581 325 22 594 1136 372 880 4.14e-30 129
Msa1094530 MtrunA17_Chr5g0394201 24.296 568 325 18 641 1196 385 859 1.70e-23 108
Msa1094530 MtrunA17_Chr4g0052341 24.815 540 318 20 637 1160 763 1230 1.01e-22 106
Msa1094530 MtrunA17_Chr1g0190391 28.870 239 140 9 600 833 576 789 7.13e-22 102
Msa1094530 MtrunA17_Chr3g0137091 24.597 496 302 16 641 1127 311 743 1.12e-21 102
Msa1094530 MtrunA17_Chr1g0205891 25.050 499 284 15 641 1127 398 818 5.57e-21 100
Msa1094530 MtrunA17_Chr4g0040301 26.174 596 292 27 647 1158 18 549 9.30e-21 98.6
Msa1094530 MtrunA17_Chr4g0066741 24.078 515 298 17 641 1146 210 640 5.76e-20 96.7
Msa1094530 MtrunA17_Chr2g0286291 23.930 514 300 17 641 1146 213 643 8.63e-19 92.8
Msa1094530 MtrunA17_Chr1g0190381 34.969 163 94 4 996 1149 196 355 1.68e-18 90.9
Msa1094530 MtrunA17_Chr4g0066651 21.869 567 367 14 647 1206 1017 1514 1.80e-16 85.9
Msa1094530 MtrunA17_Chr3g0114111 64.815 54 19 0 1142 1195 1 54 4.76e-14 68.6
Msa1094530 MtrunA17_Chr7g0257101 31.250 176 113 5 971 1145 1173 1341 1.35e-12 72.8
Msa1094530 MtrunA17_Chr3g0095091 29.670 182 117 4 957 1136 856 1028 1.47e-12 72.8
Msa1094530 MtrunA17_Chr5g0442141 30.168 179 114 4 957 1133 902 1071 1.96e-12 72.4
Msa1094530 MtrunA17_Chr1g0183681 30.714 140 91 3 1005 1144 750 883 4.61e-12 70.9
Msa1094530 MtrunA17_Chr2g0320751 35.000 120 72 3 1008 1127 868 981 2.78e-11 68.2
Msa1094530 MtrunA17_Chr1g0168031 29.932 147 95 4 983 1127 978 1118 7.00e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1094530 AT3G42670.2 60.587 784 281 11 422 1187 480 1253 0.0 943
Msa1094530 AT3G42670.2 35.110 319 190 7 4 319 3 307 1.39e-48 190
Msa1094530 AT3G42670.3 60.587 784 281 11 422 1187 480 1253 0.0 943
Msa1094530 AT3G42670.3 35.110 319 190 7 4 319 3 307 1.39e-48 190
Msa1094530 AT3G42670.1 60.587 784 281 11 422 1187 480 1253 0.0 943
Msa1094530 AT3G42670.1 35.110 319 190 7 4 319 3 307 1.39e-48 190
Msa1094530 AT3G42670.4 60.433 786 281 11 422 1187 480 1255 0.0 943
Msa1094530 AT3G42670.4 35.110 319 190 7 4 319 3 307 1.36e-48 190
Msa1094530 AT5G20420.1 60.486 782 284 12 423 1187 486 1259 0.0 937
Msa1094530 AT5G20420.1 35.542 332 173 11 4 317 2 310 4.83e-44 175
Msa1094530 AT3G24340.1 32.927 738 422 16 447 1177 443 1114 3.04e-107 365
Msa1094530 AT1G05490.1 31.975 785 437 25 462 1209 685 1409 5.05e-105 363
Msa1094530 AT2G16390.1 31.565 735 408 23 428 1144 190 847 4.48e-89 308
Msa1094530 AT2G16390.2 31.565 735 408 23 428 1144 193 850 4.92e-89 308
Msa1094530 AT2G21450.3 32.061 655 363 20 508 1144 92 682 1.43e-84 291
Msa1094530 AT2G21450.1 32.061 655 363 20 508 1144 183 773 3.48e-84 293
Msa1094530 AT2G21450.2 32.061 655 363 20 508 1144 190 780 5.03e-84 293
Msa1094530 AT3G19210.2 25.040 627 359 23 606 1197 180 730 4.87e-31 132
Msa1094530 AT3G19210.1 24.324 629 363 22 606 1197 180 732 1.62e-30 130
Msa1094530 AT3G19210.3 24.324 629 363 22 606 1197 180 732 2.47e-30 130
Msa1094530 AT5G63950.1 25.536 560 324 19 606 1136 377 872 7.42e-30 129
Msa1094530 AT5G63950.2 25.540 556 312 20 606 1136 377 855 4.48e-28 123
Msa1094530 AT1G08600.4 28.395 243 132 8 602 833 715 926 1.06e-22 106
Msa1094530 AT1G08600.4 33.735 166 92 4 996 1149 1123 1282 1.34e-17 89.7
Msa1094530 AT1G08600.3 28.395 243 132 8 602 833 715 926 1.06e-22 106
Msa1094530 AT1G08600.3 33.735 166 92 4 996 1149 1123 1282 1.34e-17 89.7
Msa1094530 AT1G08600.2 28.395 243 132 8 602 833 715 926 1.06e-22 106
Msa1094530 AT1G08600.2 33.735 166 92 4 996 1149 1123 1282 1.34e-17 89.7
Msa1094530 AT3G06010.1 25.699 572 313 23 641 1196 425 900 4.58e-22 103
Msa1094530 AT4G31900.2 23.913 552 291 20 596 1127 173 615 1.52e-21 102
Msa1094530 AT4G31900.1 23.913 552 291 20 596 1127 214 656 1.63e-21 102
Msa1094530 AT4G31900.3 23.913 552 291 20 596 1127 214 656 1.70e-21 102
Msa1094530 AT1G03750.1 24.712 607 302 25 639 1158 159 697 2.56e-21 101
Msa1094530 AT2G25170.1 25.000 508 287 20 640 1127 294 727 2.61e-19 95.1
Msa1094530 AT2G25170.4 25.000 508 287 20 640 1127 294 727 2.61e-19 95.1
Msa1094530 AT2G25170.2 25.000 508 287 20 640 1127 311 744 3.33e-19 94.7
Msa1094530 AT2G25170.3 25.000 508 287 20 640 1127 320 753 3.51e-19 94.7
Msa1094530 AT3G06400.2 23.002 513 306 15 641 1146 211 641 3.73e-18 91.3
Msa1094530 AT3G06400.3 23.002 513 306 15 641 1146 211 641 4.13e-18 90.9
Msa1094530 AT3G06400.1 23.002 513 306 15 641 1146 211 641 4.38e-18 90.9
Msa1094530 AT1G08600.1 33.735 166 92 4 996 1149 1102 1261 1.37e-17 89.7
Msa1094530 AT5G66750.1 31.731 208 126 6 1006 1212 540 732 4.34e-17 87.4
Msa1094530 AT2G44980.1 25.714 525 288 22 647 1150 80 523 2.64e-14 78.6
Msa1094530 AT3G57300.1 34.483 145 89 3 1006 1150 1222 1360 1.83e-13 76.3
Msa1094530 AT3G57300.4 34.483 145 89 3 1006 1150 1222 1360 1.83e-13 76.3
Msa1094530 AT3G57300.2 34.483 145 89 3 1006 1150 1255 1393 2.18e-13 75.9
Msa1094530 AT2G44980.3 24.908 546 299 23 640 1150 72 541 2.59e-13 75.5
Msa1094530 AT2G44980.2 25.046 539 293 23 647 1150 80 542 4.35e-13 74.7
Msa1094530 AT2G13370.1 30.978 184 110 6 957 1136 910 1080 9.41e-13 73.9
Msa1094530 AT2G13370.2 30.978 184 110 6 957 1136 910 1080 9.41e-13 73.9
Msa1094530 AT2G13370.3 30.978 184 110 6 957 1136 910 1080 9.41e-13 73.9
Msa1094530 AT5G19310.2 29.843 191 121 4 987 1176 427 605 1.40e-12 72.8
Msa1094530 AT5G19310.1 29.843 191 121 4 987 1176 691 869 1.45e-12 73.2
Msa1094530 AT5G43530.1 31.410 156 97 5 975 1127 1094 1242 2.61e-12 72.4
Msa1094530 AT2G28290.1 32.298 161 101 4 1015 1173 1094 1248 3.40e-12 72.0
Msa1094530 AT2G28290.2 32.298 161 101 4 1015 1173 1094 1248 3.49e-12 72.0
Msa1094530 AT2G28290.5 32.298 161 101 4 1015 1173 1095 1249 3.61e-12 72.0
Msa1094530 AT2G28290.6 32.298 161 101 4 1015 1173 1095 1249 3.70e-12 72.0
Msa1094530 AT2G28290.3 32.298 161 101 4 1015 1173 1094 1248 3.76e-12 72.0
Msa1094530 AT2G28290.4 32.298 161 101 4 1015 1173 1094 1248 3.76e-12 72.0
Msa1094530 AT5G05130.1 34.959 123 74 3 1006 1127 725 842 4.89e-12 71.2
Msa1094530 AT2G18760.3 37.500 96 59 1 1049 1144 840 934 1.06e-11 70.1
Msa1094530 AT2G18760.4 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1
Msa1094530 AT2G18760.1 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1
Msa1094530 AT2G18760.2 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1
Msa1094530 AT2G18760.7 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1
Msa1094530 AT2G18760.5 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1
Msa1094530 AT2G18760.6 37.500 96 59 1 1049 1144 781 875 1.14e-11 70.1

Find 197 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACACTTACATGAAGAATT+TGG 0.169887 7_3:-16438209 Msa1094530:CDS
GCTCAGAACAAATCTTATTT+TGG 0.176054 7_3:+16436177 None:intergenic
AGCACTTCGTGAACAAATTT+TGG 0.230747 7_3:+16436661 None:intergenic
CTGAAGTGGTTAAGCCTTAT+AGG 0.238613 7_3:-16439002 Msa1094530:CDS
AGGGCTTTCTCTCAAAGTTT+TGG 0.255357 7_3:+16436843 None:intergenic
GAATGAAACCTTCTTTAAAA+AGG 0.258801 7_3:+16438888 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 7_3:+16436790 None:intergenic
TTTGTTTCTTCATTTATAAT+TGG 0.272218 7_3:+16438163 None:intergenic
TATACGTTCAATGAAGAAAT+TGG 0.272322 7_3:-16437815 Msa1094530:CDS
CCTGGAGTTCCAAGACCTTC+TGG 0.279541 7_3:-16437003 Msa1094530:CDS
GAGATTAAACTTACTGGAAT+AGG 0.282799 7_3:+16439363 None:intergenic
AATTCATGGTTCGGATGATA+TGG 0.288963 7_3:-16438365 Msa1094530:CDS
CCATGAATTCGCCTCCTTGC+AGG 0.300379 7_3:+16438379 None:intergenic
GTCCAACCCGATTTGACATT+TGG 0.313761 7_3:+16439385 None:intergenic
AAACAGCATTTGAAGCAATA+AGG 0.314787 7_3:-16439587 Msa1094530:intron
TTCCAATGGCACCTAGAAAA+AGG 0.326300 7_3:-16442031 None:intergenic
CCAGGAAGAACCGTAGGTTT+TGG 0.328085 7_3:+16437021 None:intergenic
TGGTGATGTAAAACATGTTT+TGG 0.329183 7_3:-16436983 Msa1094530:CDS
AGGCCTTCAATCTGATTTGA+TGG 0.332666 7_3:+16438682 None:intergenic
AGATGACTTGTCTGCCATTT+GGG 0.334970 7_3:-16438092 Msa1094530:CDS
CAGCGGTTCAAAGATACTTC+TGG 0.337244 7_3:-16435966 Msa1094530:CDS
ACAGAAACTGCAGAAGAAAA+TGG 0.339883 7_3:-16436362 Msa1094530:CDS
CAGATGACTTGTCTGCCATT+TGG 0.340160 7_3:-16438093 Msa1094530:CDS
AAATACTTTCAATGGCAAAA+TGG 0.340921 7_3:-16436067 Msa1094530:CDS
AACTATTATATTGAAGCCTT+TGG 0.344481 7_3:+16439055 None:intergenic
CTCTACCTCGAGAGGGTAAC+TGG 0.351257 7_3:+16436327 None:intergenic
CCAAAACCTACGGTTCTTCC+TGG 0.354433 7_3:-16437021 Msa1094530:CDS
CAGCTTCGTGAGGTTGTCTC+TGG 0.354705 7_3:+16439196 None:intergenic
ATCAAATTTGATTTAAGAAA+AGG 0.357435 7_3:-16436202 Msa1094530:CDS
TCAGATGAATCCCACCTATA+AGG 0.365181 7_3:+16438988 None:intergenic
AAAGAGGTTCTGCTACTTAC+TGG 0.365932 7_3:-16436043 Msa1094530:CDS
TTCATCAACGTTTATGAAAG+TGG 0.366193 7_3:-16436463 Msa1094530:CDS
GTTGATGATAATGTTACTTT+GGG 0.371974 7_3:-16438430 Msa1094530:CDS
TGTTACAATATCAAGTGATT+TGG 0.373273 7_3:-16438455 Msa1094530:CDS
CCTTCTAGAAGGATCAGATT+TGG 0.373446 7_3:-16435549 Msa1094530:CDS
AGAAGAACCTATGTAACGTT+TGG 0.381332 7_3:+16438630 None:intergenic
AATTCCTCTGATACACTTCC+TGG 0.382519 7_3:-16436439 Msa1094530:CDS
AAACGAAATGGGAAGGGATT+CGG 0.382759 7_3:-16438336 Msa1094530:CDS
CTATGCTCCAAATGTCAAAT+CGG 0.384080 7_3:-16439392 Msa1094530:CDS
GCAGCAAGTTGTCTTCTTGA+TGG 0.386624 7_3:-16438049 Msa1094530:CDS
TCATCAAGTATCATGATTCC+AGG 0.388586 7_3:+16436823 None:intergenic
AAGGTTGAGGAAATGCTTAA+TGG 0.392142 7_3:-16436773 Msa1094530:CDS
GTCTGCCATTTGGGAAGAAA+TGG 0.392168 7_3:-16438083 Msa1094530:CDS
GAAGAATTTGGATAGTCTTC+CGG 0.394022 7_3:-16438197 Msa1094530:CDS
AGTTACTTGAAGTTATTTCC+TGG 0.397468 7_3:-16437171 Msa1094530:CDS
TTGACAAACAGAAGTAATAA+AGG 0.397493 7_3:-16438271 Msa1094530:CDS
GCAGCATTTGCTTGAGGCGC+GGG 0.398158 7_3:-16436587 Msa1094530:CDS
CGAACGAGGCCATACAAGAT+AGG 0.400717 7_3:-16438580 Msa1094530:CDS
GTCATGTTCACAAATTTCAT+TGG 0.407210 7_3:+16437838 None:intergenic
CCTGCAAGGAGGCGAATTCA+TGG 0.412723 7_3:-16438379 Msa1094530:CDS
TATTTGAGAAATACTTTCAA+TGG 0.412834 7_3:-16436075 Msa1094530:CDS
ATCACAGTCAAGATTAGTCT+TGG 0.426980 7_3:-16438950 Msa1094530:CDS
TCACAGTCAAGATTAGTCTT+GGG 0.431530 7_3:-16438949 Msa1094530:CDS
GGATGGTAAGAGTGGTGAAA+AGG 0.434748 7_3:-16438542 Msa1094530:CDS
ATCTGATTTGATGGCATTGG+CGG 0.437082 7_3:+16438691 None:intergenic
GATCTAGATTTGTTTGAAAG+AGG 0.437409 7_3:-16436019 Msa1094530:CDS
GAAGAACCTATGTAACGTTT+GGG 0.437927 7_3:+16438631 None:intergenic
AGTTGATGATAATGTTACTT+TGG 0.438485 7_3:-16438431 Msa1094530:CDS
TCAATCTGATTTGATGGCAT+TGG 0.439902 7_3:+16438688 None:intergenic
TGTGAACTTCAAATCGGAAA+AGG 0.444435 7_3:-16438782 Msa1094530:CDS
GTTACTTGAAGTTATTTCCT+GGG 0.446436 7_3:-16437170 Msa1094530:CDS
CTCTCTGTGTTCGACGGCCA+TGG 0.448149 7_3:+16437055 None:intergenic
AAATAAGCTCCTATCTTGTA+TGG 0.448197 7_3:+16438571 None:intergenic
CATGTGTAAAGTGTGGATTT+TGG 0.450682 7_3:+16437126 None:intergenic
AGGTTCTTCTGTTGAGAAGT+TGG 0.452731 7_3:-16438617 Msa1094530:CDS
CCAAATCTGATCCTTCTAGA+AGG 0.453881 7_3:+16435549 None:intergenic
TGTTTGTCAAACAAATTGAA+TGG 0.453921 7_3:+16438284 None:intergenic
GTAAATTTCTACGAGGATCA+AGG 0.454603 7_3:-16439150 Msa1094530:CDS
TTGCATGAGGGATGGTTCCA+TGG 0.456415 7_3:+16437278 None:intergenic
AAATGTTGTGAACTTCAAAT+CGG 0.456729 7_3:-16438788 Msa1094530:CDS
TAGCCTCTTCAATTCATCTT+CGG 0.456753 7_3:+16436231 None:intergenic
GGACAGCAAGGCCTTCTAGA+AGG 0.458099 7_3:-16435560 Msa1094530:CDS
CAAATGGCAGACAAGTCATC+TGG 0.460473 7_3:+16438094 None:intergenic
ATATCACATGCTCCTGGAGC+TGG 0.460717 7_3:-16437225 Msa1094530:CDS
GATAGGAGCTTATTTGATAG+AGG 0.460980 7_3:-16438563 Msa1094530:CDS
TGCAAGAGCCACAGTCTGTT+AGG 0.460999 7_3:-16435523 Msa1094530:CDS
TGCGAATATCAGATGACAAA+GGG 0.468200 7_3:+16439478 None:intergenic
TATGATTATGAAGAATGAAA+AGG 0.468297 7_3:-16435615 Msa1094530:CDS
CGCAGCATTTGCTTGAGGCG+CGG 0.471984 7_3:-16436588 Msa1094530:CDS
TATTATATTGAAGCCTTTGG+AGG 0.472756 7_3:+16439058 None:intergenic
GTGTATCAGTTATTGACGAC+CGG 0.474170 7_3:-16435803 Msa1094530:CDS
TATAAATGAAGAAACAAAGT+TGG 0.475973 7_3:-16438158 Msa1094530:CDS
AGATTGAAGATGAAATACTT+AGG 0.478427 7_3:-16435673 Msa1094530:CDS
TTTCCGATCTTTCTTGCATG+AGG 0.479980 7_3:+16437265 None:intergenic
ATGCCATCAAATCAGATTGA+AGG 0.481650 7_3:-16438685 Msa1094530:CDS
AAGAAGAATGGTGCTGCTGC+TGG 0.481843 7_3:-16438478 Msa1094530:CDS
AATAAAGAGGTTTATGCGAC+TGG 0.484157 7_3:-16439099 Msa1094530:CDS
TGGAACTTCCTACAGAATTG+AGG 0.485813 7_3:-16436753 Msa1094530:CDS
AGTATCCATTTCTTCCCAAA+TGG 0.486016 7_3:+16438078 None:intergenic
AAATATCTTTCAAAGAAGAA+TGG 0.486991 7_3:-16438490 Msa1094530:CDS
TCAATGGCAAAATGGAAAAG+AGG 0.487364 7_3:-16436059 Msa1094530:CDS
GATTGAAGATGAAATACTTA+GGG 0.488087 7_3:-16435672 Msa1094530:CDS
TTGAGTATCCATGAAATGTA+AGG 0.489930 7_3:+16439512 None:intergenic
ATTTGCTTGAGGCGCGGGCG+AGG 0.490931 7_3:-16436582 Msa1094530:CDS
TTTACATCACCAGAAGGTCT+TGG 0.492630 7_3:+16436994 None:intergenic
ATAAGTATCGAAGAACTACT+TGG 0.498443 7_3:-16435766 Msa1094530:CDS
TTCACAACATTTATAAGAGA+AGG 0.504109 7_3:+16438799 None:intergenic
TATGCTCCAAATGTCAAATC+GGG 0.504825 7_3:-16439391 Msa1094530:CDS
AACCTATGTAACGTTTGGGT+TGG 0.506431 7_3:+16438635 None:intergenic
TCAATCAACGCTTGTGCTGA+AGG 0.506468 7_3:-16435941 Msa1094530:CDS
TTGTGGAAGATCCTTCGAAA+TGG 0.506643 7_3:-16435706 Msa1094530:CDS
GTGAACTTCAAATCGGAAAA+GGG 0.506922 7_3:-16438781 Msa1094530:CDS
TACGAGGATCAAGGTTCCCT+TGG 0.507335 7_3:-16439141 Msa1094530:CDS
ACACCCAAGTGTTCTTGTCA+TGG 0.509409 7_3:-16436929 Msa1094530:CDS
AAGAAACGAAATGACGAGAA+AGG 0.509910 7_3:+16437197 None:intergenic
TCTGTTGAGAAGTTGGAAGT+TGG 0.511537 7_3:-16438610 Msa1094530:CDS
CACCCAAGTGTTCTTGTCAT+GGG 0.512599 7_3:-16436928 Msa1094530:CDS
ACCATGGATGTATCGATCCA+AGG 0.517448 7_3:+16436293 None:intergenic
ATCAAAAGCTCTACCTCGAG+AGG 0.518482 7_3:+16436319 None:intergenic
GTGCCTGTGTATCTTATCCA+TGG 0.520986 7_3:-16437072 Msa1094530:CDS
GGAGCTTATTTGATAGAGGA+TGG 0.523316 7_3:-16438559 Msa1094530:CDS
GTTATTGACGACCGGGTCGA+TGG 0.524989 7_3:-16435795 Msa1094530:CDS
TTACGGTAAGCATCATCAAA+TGG 0.529322 7_3:+16441990 None:intergenic
ATAATTGGCTCTTCTTCAGC+CGG 0.534892 7_3:+16438178 None:intergenic
AGATGAAATACTTAGGGAGA+TGG 0.537029 7_3:-16435666 Msa1094530:CDS
TAAGATTGTGTATCATGTCA+TGG 0.538779 7_3:-16438845 Msa1094530:CDS
CCAGAAGGTCTTGGAACTCC+AGG 0.539229 7_3:+16437003 None:intergenic
GATCTTTCTTGCATGAGGGA+TGG 0.540113 7_3:+16437270 None:intergenic
CTTCAATATAATAGTTGCGA+AGG 0.540115 7_3:-16439048 Msa1094530:CDS
AGTAAAATCCTCAATTCTGT+AGG 0.540703 7_3:+16436745 None:intergenic
AAGGAGGCGAATTCATGGTT+CGG 0.541286 7_3:-16438374 Msa1094530:CDS
CACAGTCAAGATTAGTCTTG+GGG 0.541514 7_3:-16438948 Msa1094530:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 7_3:-16436792 Msa1094530:CDS
TATAATCTCAAGCTGTTCAT+CGG 0.543979 7_3:+16436384 None:intergenic
TTGATAGAGGATGGTAAGAG+TGG 0.544017 7_3:-16438550 Msa1094530:CDS
GAAAGCGCAGCATTTGCTTG+AGG 0.546756 7_3:-16436593 Msa1094530:CDS
TTCCGATCTTTCTTGCATGA+GGG 0.548848 7_3:+16437266 None:intergenic
ATCCCTCATGCAAGAAAGAT+CGG 0.551602 7_3:-16437268 Msa1094530:CDS
TGTGTCATATCACATGCTCC+TGG 0.551693 7_3:-16437231 Msa1094530:CDS
TCTGCAAAGAGAAGCCTGCA+AGG 0.554610 7_3:-16438393 Msa1094530:CDS
GGAAGAAATGGATACTGCTA+TGG 0.554695 7_3:-16438071 Msa1094530:CDS
AAATGAAGAAACAAAGTTGG+AGG 0.554893 7_3:-16438155 Msa1094530:CDS
ATCACGAGGCATATTCGTTA+CGG 0.555592 7_3:+16435589 None:intergenic
ATCGAATATTTATCCTCCAA+AGG 0.556747 7_3:-16439071 Msa1094530:CDS
CCATGGATGTATCGATCCAA+GGG 0.557758 7_3:+16436294 None:intergenic
CTCCAAATGTCAAATCGGGT+TGG 0.559335 7_3:-16439387 Msa1094530:CDS
AGTTAGATTCTAAATACTTG+AGG 0.561826 7_3:-16436633 Msa1094530:CDS
AAATAGTGATAGTTCTGAAG+TGG 0.562045 7_3:-16439016 Msa1094530:CDS
GTTAAATGTTGATGCACAGA+AGG 0.562995 7_3:-16438239 Msa1094530:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 7_3:-16435756 Msa1094530:CDS
GGAATCATGATACTTGATGA+AGG 0.567351 7_3:-16436820 Msa1094530:CDS
TAGCCCATGACAAGAACACT+TGG 0.567881 7_3:+16436925 None:intergenic
TGGATAAGATACACAGGCAC+GGG 0.569069 7_3:+16437075 None:intergenic
GGTAAGAGTGGTGAAAAGGT+AGG 0.572115 7_3:-16438538 Msa1094530:CDS
TTGCCGAAGATGAATTGAAG+AGG 0.577257 7_3:-16436234 Msa1094530:CDS
GAAGAACTACTTGGAAAGAG+TGG 0.579673 7_3:-16435757 Msa1094530:CDS
CCCTTGGATCGATACATCCA+TGG 0.580673 7_3:-16436294 Msa1094530:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 7_3:-16435657 Msa1094530:CDS
TTGTCTTCTTGATGGAACTG+AGG 0.585263 7_3:-16438041 Msa1094530:intron
AAGCAATAAGGAATGACTCA+TGG 0.585302 7_3:-16439575 Msa1094530:CDS
GTTGCAGGGTTCAAATGTAG+AGG 0.586141 7_3:-16437873 Msa1094530:intron
AGTGTCGAAAAGCGATGATG+AGG 0.586488 7_3:-16438125 Msa1094530:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 7_3:-16436786 Msa1094530:CDS
GGAATATTCTGTACTAGCTG+TGG 0.590871 7_3:-16437794 Msa1094530:CDS
CATCAAGTATCATGATTCCA+GGG 0.591198 7_3:+16436824 None:intergenic
ATTGACGACCGGGTCGATGG+AGG 0.593637 7_3:-16435792 Msa1094530:CDS
GATGAATTGAAGAGGCTAGA+CGG 0.597436 7_3:-16436226 Msa1094530:CDS
GTCCAACCCAAACGTTACAT+AGG 0.600246 7_3:-16438637 Msa1094530:CDS
GAAAAGGTAGGCGATGCTGC+TGG 0.601604 7_3:-16438526 Msa1094530:CDS
AGTGTATATATTTGTAAACC+AGG 0.603594 7_3:+16436421 None:intergenic
ATGTTGTAACGAACCACGAA+AGG 0.610210 7_3:+16438911 None:intergenic
CTTATCTTCCTCCATCGACC+CGG 0.610407 7_3:+16435784 None:intergenic
AGTGGTTAAGCCTTATAGGT+GGG 0.611188 7_3:-16438998 Msa1094530:CDS
ATTTGCACACAGAAAGTACA+TGG 0.612438 7_3:-16436866 Msa1094530:CDS
GGAACTCCAGGAAGAACCGT+AGG 0.613738 7_3:+16437015 None:intergenic
AAGTGGTTAAGCCTTATAGG+TGG 0.618090 7_3:-16438999 Msa1094530:CDS
AAAACTTTGAGAGAAAGCCC+TGG 0.619123 7_3:-16436841 Msa1094530:CDS
TTGAATCTCTCTGTGTTCGA+CGG 0.624793 7_3:+16437049 None:intergenic
ATGCGAATATCAGATGACAA+AGG 0.625364 7_3:+16439477 None:intergenic
CAAAATCCACACTTTACACA+TGG 0.625539 7_3:-16437125 Msa1094530:CDS
GATTCTAAATACTTGAGGAG+AGG 0.628538 7_3:-16436628 Msa1094530:CDS
ATATCAAATAGAGAAACTAC+AGG 0.628876 7_3:+16438748 None:intergenic
TAAACCAGGAAGTGTATCAG+AGG 0.630562 7_3:+16436435 None:intergenic
TGTATCAGTTATTGACGACC+GGG 0.631867 7_3:-16435802 Msa1094530:CDS
TCGAACACAGAGAGATTCAA+CGG 0.634741 7_3:-16437046 Msa1094530:CDS
GAATGACTCATGGCAACCTG+TGG 0.635530 7_3:-16439565 Msa1094530:CDS
TGCTGTCCTTCTGTATCACG+AGG 0.637077 7_3:+16435575 None:intergenic
CAAGAAAGATCGGAAACAAG+TGG 0.645212 7_3:-16437258 Msa1094530:CDS
TTCAACGGCTCCAAAACCTA+CGG 0.645818 7_3:-16437031 Msa1094530:CDS
AAAGAGGAGAAACAATACAG+TGG 0.648975 7_3:-16437504 Msa1094530:CDS
ATGGATAAGATACACAGGCA+CGG 0.650745 7_3:+16437074 None:intergenic
ACAAACAGAAGTAATAAAGG+TGG 0.652555 7_3:-16438268 Msa1094530:CDS
TCAAAAGCTCTACCTCGAGA+GGG 0.652702 7_3:+16436320 None:intergenic
GAGCATTGATCAGCTTCGTG+AGG 0.658839 7_3:+16439186 None:intergenic
CGGCCATGGATAAGATACAC+AGG 0.663444 7_3:+16437069 None:intergenic
CGTGATACAGAAGGACAGCA+AGG 0.667482 7_3:-16435572 Msa1094530:CDS
TACCACCAGTTACCCTCTCG+AGG 0.667880 7_3:-16436332 Msa1094530:CDS
GAAAGATCGGAAACAAGTGG+TGG 0.673137 7_3:-16437255 Msa1094530:CDS
GCGAATATCAGATGACAAAG+GGG 0.675109 7_3:+16439479 None:intergenic
TTTGCACCATGTGTAAAGTG+TGG 0.681578 7_3:+16437119 None:intergenic
AGCCCATGACAAGAACACTT+GGG 0.690203 7_3:+16436926 None:intergenic
AATCAACTCAGATAACGATG+AGG 0.714220 7_3:-16436530 Msa1094530:CDS
AATATGCCTCGTGATACAGA+AGG 0.715485 7_3:-16435581 Msa1094530:CDS
AAGTTTGAAGATCCTCGCAG+CGG 0.715513 7_3:-16435983 Msa1094530:CDS
GCCTAAGACGATCAAAACGT+AGG 0.737559 7_3:-16438663 Msa1094530:CDS
GCAAAGAGAAGCCTGCAAGG+AGG 0.740126 7_3:-16438390 Msa1094530:CDS
TACCTCGAGAGGGTAACTGG+TGG 0.749946 7_3:+16436330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTAAAATAATTTAT+CGG + chr7_3:16439992-16440011 None:intergenic 0.0%
!!! AGTTGTTTTTTTATTAAAAT+TGG + chr7_3:16436222-16436241 None:intergenic 10.0%
!! AAAACAAATCATATATATAT+AGG + chr7_3:16439547-16439566 None:intergenic 10.0%
!!! TATATATATATGATTTGTTT+TGG - chr7_3:16439546-16439565 Msa1094530:CDS 10.0%
!!! TTTAAATTTAGTTTCTTATT+TGG - chr7_3:16439847-16439866 Msa1094530:intron 10.0%
!! ATTTATTAATACATTGATCA+TGG + chr7_3:16435707-16435726 None:intergenic 15.0%
!! AATTCTATTGTAAATCTTAT+TGG + chr7_3:16435991-16436010 None:intergenic 15.0%
!! TACAATTATCAAAATTAAAG+AGG - chr7_3:16436289-16436308 Msa1094530:CDS 15.0%
!! TATAAAAACACTTAATAAAG+AGG - chr7_3:16438431-16438450 Msa1094530:CDS 15.0%
!!! TTTGTTTCTTCATTTATAAT+TGG + chr7_3:16439383-16439402 None:intergenic 15.0%
!! TTAAATGTATATTCTTGTTA+AGG + chr7_3:16439832-16439851 None:intergenic 15.0%
!!! TTTAAAATAATTTATCGGTT+AGG + chr7_3:16439987-16440006 None:intergenic 15.0%
!!! ATTTTAAATATAATGATAGG+TGG - chr7_3:16439999-16440018 Msa1094530:intron 15.0%
!!! ATCAAATTTGATTTAAGAAA+AGG - chr7_3:16441341-16441360 Msa1094530:intron 15.0%
!! AACATATGAAAAACTACAAA+TGG - chr7_3:16435631-16435650 Msa1094530:CDS 20.0%
!! TAAATATGATATAGAGACTT+TGG - chr7_3:16435722-16435741 Msa1094530:CDS 20.0%
!!! GTTATATTTTCTTATAGGTT+TGG + chr7_3:16436094-16436113 None:intergenic 20.0%
!!! AGCATGTTATATTTTCTTAT+AGG + chr7_3:16436099-16436118 None:intergenic 20.0%
!! TATCAAAATTAAAGAGGATA+AGG - chr7_3:16436295-16436314 Msa1094530:CDS 20.0%
!! ATCAAAATTAAAGAGGATAA+GGG - chr7_3:16436296-16436315 Msa1094530:CDS 20.0%
!! AAAAGTGAGTATATATAGAA+TGG - chr7_3:16436809-16436828 Msa1094530:CDS 20.0%
!! ATCGAATGTTTACATAATTT+AGG + chr7_3:16437532-16437551 None:intergenic 20.0%
!! AAAAATAACACAAATGTTGA+GGG + chr7_3:16437598-16437617 None:intergenic 20.0%
!!! CTTTAATATATTTTTTGGGA+TGG - chr7_3:16437631-16437650 Msa1094530:intron 20.0%
!! ATTTAAGAGATTAAACTTAC+TGG + chr7_3:16438189-16438208 None:intergenic 20.0%
!!! TGTTTTTATATTTCTACCAA+GGG + chr7_3:16438421-16438440 None:intergenic 20.0%
!!! CAATCTTATTTTGAATAGAT+CGG + chr7_3:16438686-16438705 None:intergenic 20.0%
!!! TTCTTTGAAAGATATTTTGA+AGG + chr7_3:16439050-16439069 None:intergenic 20.0%
!! AAATATCTTTCAAAGAAGAA+TGG - chr7_3:16439053-16439072 Msa1094530:CDS 20.0%
!! TATAAATGAAGAAACAAAGT+TGG - chr7_3:16439385-16439404 Msa1094530:CDS 20.0%
!! CAGATCATTAAAAATATGAT+AGG + chr7_3:16439629-16439648 None:intergenic 20.0%
!!! CTACTGTAATTTTTAAATAG+AGG - chr7_3:16439883-16439902 Msa1094530:intron 20.0%
!! TATTTGAGAAATACTTTCAA+TGG - chr7_3:16441468-16441487 Msa1094530:intron 20.0%
!! TATGATTATGAAGAATGAAA+AGG - chr7_3:16441928-16441947 Msa1094530:intron 20.0%
! AAACTACAAATGGATATTAC+AGG - chr7_3:16435641-16435660 Msa1094530:CDS 25.0%
! ATTTGATTGCACCATAAATT+TGG - chr7_3:16435787-16435806 Msa1094530:CDS 25.0%
! ATCCTTTATAGCCAAATTTA+TGG + chr7_3:16435801-16435820 None:intergenic 25.0%
! ATAGCGGTTTGAAAAATTTA+CGG - chr7_3:16435875-16435894 Msa1094530:CDS 25.0%
! TGTATATGCAATTGATGAAT+TGG - chr7_3:16436136-16436155 Msa1094530:CDS 25.0%
!! TAGGTTTTCACTATTTTACT+TGG + chr7_3:16436184-16436203 None:intergenic 25.0%
! AATAGTGAAAACCTAATTCA+AGG - chr7_3:16436189-16436208 Msa1094530:CDS 25.0%
! AAAACCTAATTCAAGGAATT+AGG - chr7_3:16436196-16436215 Msa1094530:CDS 25.0%
! TTCAACATTGTTACTATTAG+TGG + chr7_3:16436423-16436442 None:intergenic 25.0%
! TAATTGTTCTTGTGTTCAAA+GGG + chr7_3:16436633-16436652 None:intergenic 25.0%
!! TTCTTTCAAGTAAATTGGTT+GGG + chr7_3:16436723-16436742 None:intergenic 25.0%
!! AAGTTTTCATGATTAGATTG+AGG - chr7_3:16437034-16437053 Msa1094530:CDS 25.0%
! TTAAAGCTAAACATTATGCT+AGG - chr7_3:16437278-16437297 Msa1094530:CDS 25.0%
!!! TTGATGATGATGTTTTAATG+TGG + chr7_3:16437313-16437332 None:intergenic 25.0%
!!! AGCTTATCTTTTTTTGTCAA+AGG + chr7_3:16437341-16437360 None:intergenic 25.0%
! AAAATAACACAAATGTTGAG+GGG + chr7_3:16437597-16437616 None:intergenic 25.0%
! GAAAAATAACACAAATGTTG+AGG + chr7_3:16437599-16437618 None:intergenic 25.0%
! TGTTGATATCTCAATTATGT+TGG + chr7_3:16437685-16437704 None:intergenic 25.0%
!! ATTTAGCTTAACATATATCG+TGG + chr7_3:16437870-16437889 None:intergenic 25.0%
! GAGCTTATAAAAATTGAGTT+TGG - chr7_3:16438000-16438019 Msa1094530:intron 25.0%
! AAAAACAACCTTACATTTCA+TGG - chr7_3:16438023-16438042 Msa1094530:intron 25.0%
!! GTTTTATGTAAATTTCTACG+AGG - chr7_3:16438386-16438405 Msa1094530:CDS 25.0%
!!! GTGTTTTTATATTTCTACCA+AGG + chr7_3:16438422-16438441 None:intergenic 25.0%
! AACTATTATATTGAAGCCTT+TGG + chr7_3:16438491-16438510 None:intergenic 25.0%
!!! TACAACATCCTTTTTAAAGA+AGG - chr7_3:16438647-16438666 Msa1094530:CDS 25.0%
!! GAATGAAACCTTCTTTAAAA+AGG + chr7_3:16438658-16438677 None:intergenic 25.0%
! TTCACAACATTTATAAGAGA+AGG + chr7_3:16438747-16438766 None:intergenic 25.0%
! AAATGTTGTGAACTTCAAAT+CGG - chr7_3:16438755-16438774 Msa1094530:CDS 25.0%
! ATATCAAATAGAGAAACTAC+AGG + chr7_3:16438798-16438817 None:intergenic 25.0%
!! GATATGTTTTGTGATTATGA+TGG - chr7_3:16438813-16438832 Msa1094530:CDS 25.0%
! TGTTACAATATCAAGTGATT+TGG - chr7_3:16439088-16439107 Msa1094530:CDS 25.0%
!!! AGTTGATGATAATGTTACTT+TGG - chr7_3:16439112-16439131 Msa1094530:CDS 25.0%
!!! GTTGATGATAATGTTACTTT+GGG - chr7_3:16439113-16439132 Msa1094530:CDS 25.0%
!!! ATATGGATTTTGAAACGAAA+TGG - chr7_3:16439195-16439214 Msa1094530:CDS 25.0%
!!! TATGGATTTTGAAACGAAAT+GGG - chr7_3:16439196-16439215 Msa1094530:CDS 25.0%
! TGTTTGTCAAACAAATTGAA+TGG + chr7_3:16439262-16439281 None:intergenic 25.0%
! TTGACAAACAGAAGTAATAA+AGG - chr7_3:16439272-16439291 Msa1094530:intron 25.0%
!!! GTTTAATTTTATTACGCTGT+CGG - chr7_3:16439570-16439589 Msa1094530:CDS 25.0%
!! TATGATAGGTTGTAATTTGT+TGG + chr7_3:16439615-16439634 None:intergenic 25.0%
! TATACGTTCAATGAAGAAAT+TGG - chr7_3:16439728-16439747 Msa1094530:intron 25.0%
!! TTGTACGAAATAACTTTTCA+CGG + chr7_3:16439946-16439965 None:intergenic 25.0%
! TAATGATGAACAAAAATCAG+AGG - chr7_3:16440068-16440087 Msa1094530:intron 25.0%
!!! AAAAAGCTTTTGAGTTTCTT+TGG - chr7_3:16440226-16440245 Msa1094530:intron 25.0%
! GTCTTGGAAAAATAAAAAAG+TGG - chr7_3:16440586-16440605 Msa1094530:intron 25.0%
!! TTTTGTATCTTGTCTCATTA+AGG + chr7_3:16440658-16440677 None:intergenic 25.0%
! AGTTAGATTCTAAATACTTG+AGG - chr7_3:16440910-16440929 Msa1094530:intron 25.0%
! AGTGTATATATTTGTAAACC+AGG + chr7_3:16441125-16441144 None:intergenic 25.0%
! AAATACTTTCAATGGCAAAA+TGG - chr7_3:16441476-16441495 Msa1094530:intron 25.0%
!!! TGATATTTTTGGATTCTGAA+TGG - chr7_3:16441651-16441670 Msa1094530:intron 25.0%
! AGATTGAAGATGAAATACTT+AGG - chr7_3:16441870-16441889 Msa1094530:intron 25.0%
! GATTGAAGATGAAATACTTA+GGG - chr7_3:16441871-16441890 Msa1094530:intron 25.0%
CAAAGAAGATAGAAGACTTA+CGG + chr7_3:16435573-16435592 None:intergenic 30.0%
CACCATAAATTTGGCTATAA+AGG - chr7_3:16435796-16435815 Msa1094530:CDS 30.0%
GCTATAAAGGATCTATTTGT+TGG - chr7_3:16435809-16435828 Msa1094530:CDS 30.0%
! GATCTATTTGTTGGTCTATA+TGG - chr7_3:16435818-16435837 Msa1094530:CDS 30.0%
ATGCAATTGATGAATTGGTT+AGG - chr7_3:16436141-16436160 Msa1094530:CDS 30.0%
GTGAACTACTACAAAAATCT+CGG + chr7_3:16436336-16436355 None:intergenic 30.0%
GAAGAACTATGATAGTTTCA+AGG + chr7_3:16436468-16436487 None:intergenic 30.0%
!! TCAAAGGGTATTTGAAGTTT+GGG + chr7_3:16436514-16436533 None:intergenic 30.0%
!! TTCAAAGGGTATTTGAAGTT+TGG + chr7_3:16436515-16436534 None:intergenic 30.0%
CTTCAAATACCCTTTGAATT+TGG - chr7_3:16436517-16436536 Msa1094530:CDS 30.0%
CTAATTGTTCTTGTGTTCAA+AGG + chr7_3:16436634-16436653 None:intergenic 30.0%
! GTTCTTTCAAGTAAATTGGT+TGG + chr7_3:16436724-16436743 None:intergenic 30.0%
! GTTGGTTCTTTCAAGTAAAT+TGG + chr7_3:16436728-16436747 None:intergenic 30.0%
!! TTGAGTCATATGATTTGGTA+GGG + chr7_3:16436769-16436788 None:intergenic 30.0%
!! TTTGAGTCATATGATTTGGT+AGG + chr7_3:16436770-16436789 None:intergenic 30.0%
!!! TCGATTCACTATGTTGTTTT+TGG + chr7_3:16436857-16436876 None:intergenic 30.0%
! AGCTACATGAACTATGATTT+TGG + chr7_3:16437478-16437497 None:intergenic 30.0%
!! ACATTTGTTTGTTTTCCTTG+CGG - chr7_3:16437559-16437578 Msa1094530:intron 30.0%
!! AGAATATCGTTGTTTTGTTG+AGG - chr7_3:16437657-16437676 Msa1094530:intron 30.0%
AACAAAACTCATAGACTTGT+TGG - chr7_3:16437763-16437782 Msa1094530:CDS 30.0%
! AAACAGCATTTGAAGCAATA+AGG - chr7_3:16437956-16437975 Msa1094530:intron 30.0%
! TCAATTTTTATAAGCTCCAC+AGG + chr7_3:16437997-16438016 None:intergenic 30.0%
TTGAGTATCCATGAAATGTA+AGG + chr7_3:16438034-16438053 None:intergenic 30.0%
GAGATTAAACTTACTGGAAT+AGG + chr7_3:16438183-16438202 None:intergenic 30.0%
ATCGAATATTTATCCTCCAA+AGG - chr7_3:16438472-16438491 Msa1094530:CDS 30.0%
TATTATATTGAAGCCTTTGG+AGG + chr7_3:16438488-16438507 None:intergenic 30.0%
CTTCAATATAATAGTTGCGA+AGG - chr7_3:16438495-16438514 Msa1094530:CDS 30.0%
!! AAATAGTGATAGTTCTGAAG+TGG - chr7_3:16438527-16438546 Msa1094530:CDS 30.0%
TAAGATTGTGTATCATGTCA+TGG - chr7_3:16438698-16438717 Msa1094530:CDS 30.0%
AAATAAGCTCCTATCTTGTA+TGG + chr7_3:16438975-16438994 None:intergenic 30.0%
!!! ATTTTGAAACGAAATGGGAA+GGG - chr7_3:16439201-16439220 Msa1094530:CDS 30.0%
ACAAACAGAAGTAATAAAGG+TGG - chr7_3:16439275-16439294 Msa1094530:intron 30.0%
TGACACTTACATGAAGAATT+TGG - chr7_3:16439334-16439353 Msa1094530:intron 30.0%
AAATGAAGAAACAAAGTTGG+AGG - chr7_3:16439388-16439407 Msa1094530:CDS 30.0%
TATATGAATTATACCGTTGC+AGG - chr7_3:16439655-16439674 Msa1094530:intron 30.0%
ATATGAATTATACCGTTGCA+GGG - chr7_3:16439656-16439675 Msa1094530:intron 30.0%
GTCATGTTCACAAATTTCAT+TGG + chr7_3:16439708-16439727 None:intergenic 30.0%
CGTACAAAATGTTACACAAT+AGG - chr7_3:16439959-16439978 Msa1094530:intron 30.0%
TGCAGAAAAAGACAATGTTT+GGG - chr7_3:16440161-16440180 Msa1094530:intron 30.0%
! TTTCTTTGGAAAAACATTGC+TGG - chr7_3:16440240-16440259 Msa1094530:intron 30.0%
! AGTTACTTGAAGTTATTTCC+TGG - chr7_3:16440372-16440391 Msa1094530:intron 30.0%
! GTTACTTGAAGTTATTTCCT+GGG - chr7_3:16440373-16440392 Msa1094530:intron 30.0%
!! TGGTGATGTAAAACATGTTT+TGG - chr7_3:16440560-16440579 Msa1094530:intron 30.0%
!! AAACATGTTTTGGATTGTCT+TGG - chr7_3:16440570-16440589 Msa1094530:intron 30.0%
AGTAAAATCCTCAATTCTGT+AGG + chr7_3:16440801-16440820 None:intergenic 30.0%
! GAATTGAGGATTTTACTTTC+TGG - chr7_3:16440804-16440823 Msa1094530:intron 30.0%
TTCATCAACGTTTATGAAAG+TGG - chr7_3:16441080-16441099 Msa1094530:intron 30.0%
TATAATCTCAAGCTGTTCAT+CGG + chr7_3:16441162-16441181 None:intergenic 30.0%
!! GCTCAGAACAAATCTTATTT+TGG + chr7_3:16441369-16441388 None:intergenic 30.0%
ACGTGTAGTGAAAAATGAAA+AGG - chr7_3:16441397-16441416 Msa1094530:intron 30.0%
AACTCTATGAAAAATCTCAG+AGG + chr7_3:16441449-16441468 None:intergenic 30.0%
! GATCTAGATTTGTTTGAAAG+AGG - chr7_3:16441524-16441543 Msa1094530:intron 30.0%
!!! TGCTTCTAGAGTGATATTTT+TGG - chr7_3:16441640-16441659 Msa1094530:intron 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr7_3:16441680-16441699 None:intergenic 30.0%
!! ATAAGTATCGAAGAACTACT+TGG - chr7_3:16441777-16441796 Msa1094530:intron 30.0%
!!! TTCTTGCATGATTTTTAGTG+AGG - chr7_3:16441811-16441830 Msa1094530:intron 30.0%
! TGTTGCAAATGCCTTTTTCT+AGG + chr7_3:16435526-16435545 None:intergenic 35.0%
TTACGGTAAGCATCATCAAA+TGG + chr7_3:16435556-16435575 None:intergenic 35.0%
TCCTCATGCATAATAGACTA+GGG + chr7_3:16435596-16435615 None:intergenic 35.0%
TTCCTCATGCATAATAGACT+AGG + chr7_3:16435597-16435616 None:intergenic 35.0%
TTGGCCTAATTCCTTGAATT+AGG + chr7_3:16436203-16436222 None:intergenic 35.0%
TTACTATTAGTGGAAGTCCT+TGG + chr7_3:16436413-16436432 None:intergenic 35.0%
!! CAAAGGGTATTTGAAGTTTG+GGG + chr7_3:16436513-16436532 None:intergenic 35.0%
!! CAAGAAGCACCAAATTCAAA+GGG + chr7_3:16436529-16436548 None:intergenic 35.0%
!! TCAAGAAGCACCAAATTCAA+AGG + chr7_3:16436530-16436549 None:intergenic 35.0%
AAATTGGTTGGGCTTAATCA+AGG + chr7_3:16436712-16436731 None:intergenic 35.0%
GCACTTTGAGTCATATGATT+TGG + chr7_3:16436774-16436793 None:intergenic 35.0%
! TGAATCGATTCAAAATGTCC+AGG - chr7_3:16436959-16436978 Msa1094530:CDS 35.0%
AATCGTTTGAATCTTCATCC+TGG + chr7_3:16436980-16436999 None:intergenic 35.0%
TACTTAACCCACAAGATATC+AGG - chr7_3:16437197-16437216 Msa1094530:CDS 35.0%
TGTTGTTCCTGATATCTTGT+GGG + chr7_3:16437207-16437226 None:intergenic 35.0%
! TTGTTGTTCCTGATATCTTG+TGG + chr7_3:16437208-16437227 None:intergenic 35.0%
AGGAACAACAAGAAATCACA+CGG - chr7_3:16437217-16437236 Msa1094530:CDS 35.0%
GCTAAAGACACATATTGCTA+AGG - chr7_3:16437241-16437260 Msa1094530:CDS 35.0%
!! CATTTGTTTGTTTTCCTTGC+GGG - chr7_3:16437560-16437579 Msa1094530:intron 35.0%
TGAGTTTAACAGTATCACGA+TGG + chr7_3:16437902-16437921 None:intergenic 35.0%
AAGCAATAAGGAATGACTCA+TGG - chr7_3:16437968-16437987 Msa1094530:intron 35.0%
TGCGAATATCAGATGACAAA+GGG + chr7_3:16438068-16438087 None:intergenic 35.0%
ATGCGAATATCAGATGACAA+AGG + chr7_3:16438069-16438088 None:intergenic 35.0%
CTATGCTCCAAATGTCAAAT+CGG - chr7_3:16438151-16438170 Msa1094530:CDS 35.0%
TATGCTCCAAATGTCAAATC+GGG - chr7_3:16438152-16438171 Msa1094530:CDS 35.0%
GTAAATTTCTACGAGGATCA+AGG - chr7_3:16438393-16438412 Msa1094530:CDS 35.0%
AATAAAGAGGTTTATGCGAC+TGG - chr7_3:16438444-16438463 Msa1094530:CDS 35.0%
!! ATCACAGTCAAGATTAGTCT+TGG - chr7_3:16438593-16438612 Msa1094530:CDS 35.0%
!! TCACAGTCAAGATTAGTCTT+GGG - chr7_3:16438594-16438613 Msa1094530:CDS 35.0%
! GATTTTTATCTGACCTTTCG+TGG - chr7_3:16438619-16438638 Msa1094530:CDS 35.0%
TGTGAACTTCAAATCGGAAA+AGG - chr7_3:16438761-16438780 Msa1094530:CDS 35.0%
GTGAACTTCAAATCGGAAAA+GGG - chr7_3:16438762-16438781 Msa1094530:CDS 35.0%
! TCAATCTGATTTGATGGCAT+TGG + chr7_3:16438858-16438877 None:intergenic 35.0%
ATGCCATCAAATCAGATTGA+AGG - chr7_3:16438858-16438877 Msa1094530:CDS 35.0%
GAAGAACCTATGTAACGTTT+GGG + chr7_3:16438915-16438934 None:intergenic 35.0%
AGAAGAACCTATGTAACGTT+TGG + chr7_3:16438916-16438935 None:intergenic 35.0%
GATAGGAGCTTATTTGATAG+AGG - chr7_3:16438980-16438999 Msa1094530:CDS 35.0%
! AATTCATGGTTCGGATGATA+TGG - chr7_3:16439178-16439197 Msa1094530:CDS 35.0%
!!! GATTTTGAAACGAAATGGGA+AGG - chr7_3:16439200-16439219 Msa1094530:CDS 35.0%
GTTAAATGTTGATGCACAGA+AGG - chr7_3:16439304-16439323 Msa1094530:intron 35.0%
GAAGAATTTGGATAGTCTTC+CGG - chr7_3:16439346-16439365 Msa1094530:intron 35.0%
AGTATCCATTTCTTCCCAAA+TGG + chr7_3:16439468-16439487 None:intergenic 35.0%
GATAGGTGGAAAGACAAAAA+TGG - chr7_3:16440013-16440032 Msa1094530:intron 35.0%
AAGACAAAAATGGCAGAAAG+AGG - chr7_3:16440023-16440042 Msa1094530:intron 35.0%
AAAGAGGAGAAACAATACAG+TGG - chr7_3:16440039-16440058 Msa1094530:intron 35.0%
! TTGTCTTTTTCTGCAGGTAT+TGG + chr7_3:16440156-16440175 None:intergenic 35.0%
! CAAACATTGTCTTTTTCTGC+AGG + chr7_3:16440162-16440181 None:intergenic 35.0%
CTGCAGAAAAAGACAATGTT+TGG - chr7_3:16440160-16440179 Msa1094530:intron 35.0%
!! TGCATCTTTTCTTTGAGTTC+TGG + chr7_3:16440195-16440214 None:intergenic 35.0%
! GAAACTCAAAAGCTTTTTGC+TGG + chr7_3:16440224-16440243 None:intergenic 35.0%
AAGAAACGAAATGACGAGAA+AGG + chr7_3:16440349-16440368 None:intergenic 35.0%
! CATGTGTAAAGTGTGGATTT+TGG + chr7_3:16440420-16440439 None:intergenic 35.0%
CAAAATCCACACTTTACACA+TGG - chr7_3:16440418-16440437 Msa1094530:intron 35.0%
GGTGCAAAGAGTTCAAAAAA+TGG - chr7_3:16440439-16440458 Msa1094530:intron 35.0%
! ACATGTTTTACATCACCAGA+AGG + chr7_3:16440558-16440577 None:intergenic 35.0%
! ATTTGCACACAGAAAGTACA+TGG - chr7_3:16440677-16440696 Msa1094530:intron 35.0%
CATCAAGTATCATGATTCCA+GGG + chr7_3:16440722-16440741 None:intergenic 35.0%
TCATCAAGTATCATGATTCC+AGG + chr7_3:16440723-16440742 None:intergenic 35.0%
GGAATCATGATACTTGATGA+AGG - chr7_3:16440723-16440742 Msa1094530:intron 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr7_3:16440751-16440770 Msa1094530:intron 35.0%
AACCTTGATTTAGTGCTTCT+AGG + chr7_3:16440756-16440775 None:intergenic 35.0%
AAGGTTGAGGAAATGCTTAA+TGG - chr7_3:16440770-16440789 Msa1094530:intron 35.0%
! AGCACTTCGTGAACAAATTT+TGG + chr7_3:16440885-16440904 None:intergenic 35.0%
GATTCTAAATACTTGAGGAG+AGG - chr7_3:16440915-16440934 Msa1094530:intron 35.0%
AATCAACTCAGATAACGATG+AGG - chr7_3:16441013-16441032 Msa1094530:intron 35.0%
TAACGATGAGGAAAAAATGC+AGG - chr7_3:16441025-16441044 Msa1094530:intron 35.0%
AACGATGAGGAAAAAATGCA+GGG - chr7_3:16441026-16441045 Msa1094530:intron 35.0%
ACAGAAACTGCAGAAGAAAA+TGG - chr7_3:16441181-16441200 Msa1094530:intron 35.0%
GCAAAAAACTTATCTGCACA+TGG + chr7_3:16441293-16441312 None:intergenic 35.0%
TAGCCTCTTCAATTCATCTT+CGG + chr7_3:16441315-16441334 None:intergenic 35.0%
! TTTTCACTACACGTGAGATT+AGG + chr7_3:16441391-16441410 None:intergenic 35.0%
TCAATGGCAAAATGGAAAAG+AGG - chr7_3:16441484-16441503 Msa1094530:intron 35.0%
!!! TAAACCATTTTTTGCTGACC+AGG + chr7_3:16441719-16441738 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr7_3:16441787-16441806 Msa1094530:intron 35.0%
!!! GATTTTTAGTGAGGAGTTTG+TGG - chr7_3:16441820-16441839 Msa1094530:intron 35.0%
AGATGAAATACTTAGGGAGA+TGG - chr7_3:16441877-16441896 Msa1094530:intron 35.0%
AATAAAGATGCACGCTAGGA+GGG - chr7_3:16435843-16435862 Msa1094530:CDS 40.0%
TTGATGCTACGTTTGCCAAA+TGG - chr7_3:16436605-16436624 Msa1094530:CDS 40.0%
TGTGTTCAAAGGGATCCATT+TGG + chr7_3:16436623-16436642 None:intergenic 40.0%
TAATCTCATTCCACCTCCAA+AGG + chr7_3:16436672-16436691 None:intergenic 40.0%
TGCTAATAGGGATTGTAGGT+TGG + chr7_3:16436746-16436765 None:intergenic 40.0%
! GATTTGGTAGGGTGCTAATA+GGG + chr7_3:16436758-16436777 None:intergenic 40.0%
!! TGATTTGGTAGGGTGCTAAT+AGG + chr7_3:16436759-16436778 None:intergenic 40.0%
! CGTTTTCTGCACTTCTGAAT+CGG + chr7_3:16437159-16437178 None:intergenic 40.0%
GCGAATATCAGATGACAAAG+GGG + chr7_3:16438067-16438086 None:intergenic 40.0%
! TGCTCTAACTTTTTACGACG+CGG - chr7_3:16438117-16438136 Msa1094530:CDS 40.0%
! CTGAAGTGGTTAAGCCTTAT+AGG - chr7_3:16438541-16438560 Msa1094530:CDS 40.0%
! AAGTGGTTAAGCCTTATAGG+TGG - chr7_3:16438544-16438563 Msa1094530:CDS 40.0%
! AGTGGTTAAGCCTTATAGGT+GGG - chr7_3:16438545-16438564 Msa1094530:CDS 40.0%
TCAGATGAATCCCACCTATA+AGG + chr7_3:16438558-16438577 None:intergenic 40.0%
!! CACAGTCAAGATTAGTCTTG+GGG - chr7_3:16438595-16438614 Msa1094530:CDS 40.0%
ATGTTGTAACGAACCACGAA+AGG + chr7_3:16438635-16438654 None:intergenic 40.0%
! ATCTGATTTGATGGCATTGG+CGG + chr7_3:16438855-16438874 None:intergenic 40.0%
! AGGCCTTCAATCTGATTTGA+TGG + chr7_3:16438864-16438883 None:intergenic 40.0%
!! TCCTACGTTTTGATCGTCTT+AGG + chr7_3:16438884-16438903 None:intergenic 40.0%
AACCTATGTAACGTTTGGGT+TGG + chr7_3:16438911-16438930 None:intergenic 40.0%
AGGTTCTTCTGTTGAGAAGT+TGG - chr7_3:16438926-16438945 Msa1094530:CDS 40.0%
TCTGTTGAGAAGTTGGAAGT+TGG - chr7_3:16438933-16438952 Msa1094530:CDS 40.0%
!!! AAGTTGGTACTTTTCGAACG+AGG - chr7_3:16438949-16438968 Msa1094530:CDS 40.0%
GGAGCTTATTTGATAGAGGA+TGG - chr7_3:16438984-16439003 Msa1094530:CDS 40.0%
TTGATAGAGGATGGTAAGAG+TGG - chr7_3:16438993-16439012 Msa1094530:CDS 40.0%
AAACGAAATGGGAAGGGATT+CGG - chr7_3:16439207-16439226 Msa1094530:CDS 40.0%
! GAAGGGATTCGGTTCAAAAA+AGG - chr7_3:16439218-16439237 Msa1094530:CDS 40.0%
! ATAATTGGCTCTTCTTCAGC+CGG + chr7_3:16439368-16439387 None:intergenic 40.0%
! AGATGACTTGTCTGCCATTT+GGG - chr7_3:16439451-16439470 Msa1094530:CDS 40.0%
GGAAGAAATGGATACTGCTA+TGG - chr7_3:16439472-16439491 Msa1094530:CDS 40.0%
TCTACATTTGAACCCTGCAA+CGG + chr7_3:16439671-16439690 None:intergenic 40.0%
GGAATATTCTGTACTAGCTG+TGG - chr7_3:16439749-16439768 Msa1094530:intron 40.0%
ATCCCTCATGCAAGAAAGAT+CGG - chr7_3:16440275-16440294 Msa1094530:intron 40.0%
TTCCGATCTTTCTTGCATGA+GGG + chr7_3:16440280-16440299 None:intergenic 40.0%
TTTCCGATCTTTCTTGCATG+AGG + chr7_3:16440281-16440300 None:intergenic 40.0%
CAAGAAAGATCGGAAACAAG+TGG - chr7_3:16440285-16440304 Msa1094530:intron 40.0%
!! GATTTTGGTGCAAGGACTAA+TGG + chr7_3:16440405-16440424 None:intergenic 40.0%
!! AAAGTGTGGATTTTGGTGCA+AGG + chr7_3:16440413-16440432 None:intergenic 40.0%
TTTGCACCATGTGTAAAGTG+TGG + chr7_3:16440427-16440446 None:intergenic 40.0%
ATGGATAAGATACACAGGCA+CGG + chr7_3:16440472-16440491 None:intergenic 40.0%
TTGAATCTCTCTGTGTTCGA+CGG + chr7_3:16440497-16440516 None:intergenic 40.0%
TCGAACACAGAGAGATTCAA+CGG - chr7_3:16440497-16440516 Msa1094530:intron 40.0%
TTTACATCACCAGAAGGTCT+TGG + chr7_3:16440552-16440571 None:intergenic 40.0%
! AGGGCTTTCTCTCAAAGTTT+TGG + chr7_3:16440703-16440722 None:intergenic 40.0%
! AAAACTTTGAGAGAAAGCCC+TGG - chr7_3:16440702-16440721 Msa1094530:intron 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr7_3:16440757-16440776 Msa1094530:intron 40.0%
TGGAACTTCCTACAGAATTG+AGG - chr7_3:16440790-16440809 Msa1094530:intron 40.0%
AATTCCTCTGATACACTTCC+TGG - chr7_3:16441104-16441123 Msa1094530:intron 40.0%
! TAAACCAGGAAGTGTATCAG+AGG + chr7_3:16441111-16441130 None:intergenic 40.0%
!! GTAGAGCTTTTGATAACCCT+TGG - chr7_3:16441233-16441252 Msa1094530:intron 40.0%
!!! GTTGCTGTTTTGATCAACCA+TGG + chr7_3:16441269-16441288 None:intergenic 40.0%
TTGCCGAAGATGAATTGAAG+AGG - chr7_3:16441309-16441328 Msa1094530:intron 40.0%
GATGAATTGAAGAGGCTAGA+CGG - chr7_3:16441317-16441336 Msa1094530:intron 40.0%
! TGAAAAATCTCAGAGGTGCA+AGG + chr7_3:16441442-16441461 None:intergenic 40.0%
! AAAGAGGTTCTGCTACTTAC+TGG - chr7_3:16441500-16441519 Msa1094530:intron 40.0%
GTGTATCAGTTATTGACGAC+CGG - chr7_3:16441740-16441759 Msa1094530:intron 40.0%
TGTATCAGTTATTGACGACC+GGG - chr7_3:16441741-16441760 Msa1094530:intron 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr7_3:16441786-16441805 Msa1094530:intron 40.0%
TTGTGGAAGATCCTTCGAAA+TGG - chr7_3:16441837-16441856 Msa1094530:intron 40.0%
!! TTTTCTGCTTGCCATTTCGA+AGG + chr7_3:16441851-16441870 None:intergenic 40.0%
ATCACGAGGCATATTCGTTA+CGG + chr7_3:16441957-16441976 None:intergenic 40.0%
AATATGCCTCGTGATACAGA+AGG - chr7_3:16441962-16441981 Msa1094530:intron 40.0%
CCAAATCTGATCCTTCTAGA+AGG + chr7_3:16441997-16442016 None:intergenic 40.0%
! CCTTCTAGAAGGATCAGATT+TGG - chr7_3:16441994-16442013 Msa1094530:CDS 40.0%
GCCCTAGTCTATTATGCATG+AGG - chr7_3:16435592-16435611 Msa1094530:CDS 45.0%
CTCCTAGCGTGCATCTTTAT+TGG + chr7_3:16435844-16435863 None:intergenic 45.0%
CAATAAAGATGCACGCTAGG+AGG - chr7_3:16435842-16435861 Msa1094530:CDS 45.0%
ATAAAGATGCACGCTAGGAG+GGG - chr7_3:16435844-16435863 Msa1094530:CDS 45.0%
CTATTAGTGGAAGTCCTTGG+TGG + chr7_3:16436410-16436429 None:intergenic 45.0%
! TTTGAAGTTTGGGGAGTGGT+TGG + chr7_3:16436504-16436523 None:intergenic 45.0%
! GGTATTTGAAGTTTGGGGAG+TGG + chr7_3:16436508-16436527 None:intergenic 45.0%
ATTCCACCTCCAAAGGTCTT+GGG + chr7_3:16436665-16436684 None:intergenic 45.0%
! AGGGTGCTAATAGGGATTGT+AGG + chr7_3:16436750-16436769 None:intergenic 45.0%
! CAGACAGCAAGAGTACAAGT+CGG - chr7_3:16436900-16436919 Msa1094530:CDS 45.0%
!! GTTTGTTTTCCTTGCGGGTT+TGG - chr7_3:16437565-16437584 Msa1094530:intron 45.0%
CTCCAAATGTCAAATCGGGT+TGG - chr7_3:16438156-16438175 Msa1094530:CDS 45.0%
! GTCCAACCCGATTTGACATT+TGG + chr7_3:16438161-16438180 None:intergenic 45.0%
GCCTAAGACGATCAAAACGT+AGG - chr7_3:16438880-16438899 Msa1094530:CDS 45.0%
GTCCAACCCAAACGTTACAT+AGG - chr7_3:16438906-16438925 Msa1094530:CDS 45.0%
GGATGGTAAGAGTGGTGAAA+AGG - chr7_3:16439001-16439020 Msa1094530:CDS 45.0%
GGTAAGAGTGGTGAAAAGGT+AGG - chr7_3:16439005-16439024 Msa1094530:CDS 45.0%
AAGGAGGCGAATTCATGGTT+CGG - chr7_3:16439169-16439188 Msa1094530:CDS 45.0%
! AGTGTCGAAAAGCGATGATG+AGG - chr7_3:16439418-16439437 Msa1094530:CDS 45.0%
CAAATGGCAGACAAGTCATC+TGG + chr7_3:16439452-16439471 None:intergenic 45.0%
! CAGATGACTTGTCTGCCATT+TGG - chr7_3:16439450-16439469 Msa1094530:CDS 45.0%
! GTCTGCCATTTGGGAAGAAA+TGG - chr7_3:16439460-16439479 Msa1094530:CDS 45.0%
GTTGCAGGGTTCAAATGTAG+AGG - chr7_3:16439670-16439689 Msa1094530:intron 45.0%
!! GAAAAACATTGCTGGCTCCA+TGG - chr7_3:16440248-16440267 Msa1094530:intron 45.0%
GATCTTTCTTGCATGAGGGA+TGG + chr7_3:16440276-16440295 None:intergenic 45.0%
GAAAGATCGGAAACAAGTGG+TGG - chr7_3:16440288-16440307 Msa1094530:intron 45.0%
TGTGTCATATCACATGCTCC+TGG - chr7_3:16440312-16440331 Msa1094530:intron 45.0%
! AGAAAGGTTTTTCCAGCTCC+AGG + chr7_3:16440333-16440352 None:intergenic 45.0%
! AGGACTAATGGTCTTTTCCC+AGG + chr7_3:16440393-16440412 None:intergenic 45.0%
TGGATAAGATACACAGGCAC+GGG + chr7_3:16440471-16440490 None:intergenic 45.0%
GTGCCTGTGTATCTTATCCA+TGG - chr7_3:16440471-16440490 Msa1094530:intron 45.0%
TTCAACGGCTCCAAAACCTA+CGG - chr7_3:16440512-16440531 Msa1094530:intron 45.0%
ACACCCAAGTGTTCTTGTCA+TGG - chr7_3:16440614-16440633 Msa1094530:intron 45.0%
CACCCAAGTGTTCTTGTCAT+GGG - chr7_3:16440615-16440634 Msa1094530:intron 45.0%
AGCCCATGACAAGAACACTT+GGG + chr7_3:16440620-16440639 None:intergenic 45.0%
TAGCCCATGACAAGAACACT+TGG + chr7_3:16440621-16440640 None:intergenic 45.0%
TCAAAAGCTCTACCTCGAGA+GGG + chr7_3:16441226-16441245 None:intergenic 45.0%
ATCAAAAGCTCTACCTCGAG+AGG + chr7_3:16441227-16441246 None:intergenic 45.0%
! CCATGGATGTATCGATCCAA+GGG + chr7_3:16441252-16441271 None:intergenic 45.0%
! ACCATGGATGTATCGATCCA+AGG + chr7_3:16441253-16441272 None:intergenic 45.0%
AAGTTTGAAGATCCTCGCAG+CGG - chr7_3:16441560-16441579 Msa1094530:intron 45.0%
CAGCGGTTCAAAGATACTTC+TGG - chr7_3:16441577-16441596 Msa1094530:intron 45.0%
TCAATCAACGCTTGTGCTGA+AGG - chr7_3:16441602-16441621 Msa1094530:intron 45.0%
TCGTCCTGGTCAGCAAAAAA+TGG - chr7_3:16441712-16441731 Msa1094530:intron 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr7_3:16441886-16441905 Msa1094530:intron 45.0%
!!! ATTTTCTTTAATATATTTTT+TGG - chr7_3:16437626-16437645 Msa1094530:intron 5.0%
!!! TTTTCTTTAATATATTTTTT+GGG - chr7_3:16437627-16437646 Msa1094530:intron 5.0%
!!! ATTATTTTAAATATAATGAT+AGG - chr7_3:16439996-16440015 Msa1094530:intron 5.0%
GGCCAATAAAGATGCACGCT+AGG - chr7_3:16435839-16435858 Msa1094530:CDS 50.0%
TAAAGATGCACGCTAGGAGG+GGG - chr7_3:16435845-16435864 Msa1094530:CDS 50.0%
GGTGAAAAACGTCTCCACCA+AGG - chr7_3:16436393-16436412 Msa1094530:CDS 50.0%
! GGGAGTGGTTGGTTACATAG+GGG + chr7_3:16436493-16436512 None:intergenic 50.0%
! GGGGAGTGGTTGGTTACATA+GGG + chr7_3:16436494-16436513 None:intergenic 50.0%
! TGGGGAGTGGTTGGTTACAT+AGG + chr7_3:16436495-16436514 None:intergenic 50.0%
!! AAGAGTTCGAAGCGTTGCAC+GGG + chr7_3:16436573-16436592 None:intergenic 50.0%
!! GAAGAGTTCGAAGCGTTGCA+CGG + chr7_3:16436574-16436593 None:intergenic 50.0%
GAAAGAACCCCCAAGACCTT+TGG - chr7_3:16436653-16436672 Msa1094530:CDS 50.0%
TTCCACCTCCAAAGGTCTTG+GGG + chr7_3:16436664-16436683 None:intergenic 50.0%
CATTCCACCTCCAAAGGTCT+TGG + chr7_3:16436666-16436685 None:intergenic 50.0%
! CAGCAAGAGTACAAGTCGGA+TGG - chr7_3:16436904-16436923 Msa1094530:CDS 50.0%
GAATGACTCATGGCAACCTG+TGG - chr7_3:16437978-16437997 Msa1094530:intron 50.0%
!! GAGCATTGATCAGCTTCGTG+AGG + chr7_3:16438360-16438379 None:intergenic 50.0%
TACGAGGATCAAGGTTCCCT+TGG - chr7_3:16438402-16438421 Msa1094530:CDS 50.0%
CGAACGAGGCCATACAAGAT+AGG - chr7_3:16438963-16438982 Msa1094530:CDS 50.0%
!! AAGAAGAATGGTGCTGCTGC+TGG - chr7_3:16439065-16439084 Msa1094530:CDS 50.0%
TCTGCAAAGAGAAGCCTGCA+AGG - chr7_3:16439150-16439169 Msa1094530:CDS 50.0%
TTGCATGAGGGATGGTTCCA+TGG + chr7_3:16440268-16440287 None:intergenic 50.0%
ATATCACATGCTCCTGGAGC+TGG - chr7_3:16440318-16440337 Msa1094530:intron 50.0%
CGGCCATGGATAAGATACAC+AGG + chr7_3:16440477-16440496 None:intergenic 50.0%
! CCAGGAAGAACCGTAGGTTT+TGG + chr7_3:16440525-16440544 None:intergenic 50.0%
CCAAAACCTACGGTTCTTCC+TGG - chr7_3:16440522-16440541 Msa1094530:intron 50.0%
! GAAAGCGCAGCATTTGCTTG+AGG - chr7_3:16440950-16440969 Msa1094530:intron 50.0%
CCCTTGGATCGATACATCCA+TGG - chr7_3:16441249-16441268 Msa1094530:intron 50.0%
AGTATCTTTGAACCGCTGCG+AGG + chr7_3:16441575-16441594 None:intergenic 50.0%
CTTATCTTCCTCCATCGACC+CGG + chr7_3:16441762-16441781 None:intergenic 50.0%
TGCTGTCCTTCTGTATCACG+AGG + chr7_3:16441971-16441990 None:intergenic 50.0%
CGTGATACAGAAGGACAGCA+AGG - chr7_3:16441971-16441990 Msa1094530:intron 50.0%
TGCAAGAGCCACAGTCTGTT+AGG - chr7_3:16442020-16442039 Msa1094530:CDS 50.0%
TCACCCTTTCGTCCTCGCTT+CGG - chr7_3:16436352-16436371 Msa1094530:CDS 55.0%
CGGGCTACGTCTACTCTTCT+TGG - chr7_3:16436372-16436391 Msa1094530:CDS 55.0%
! AAGCGTTGCACGGGTGATTG+AGG + chr7_3:16436564-16436583 None:intergenic 55.0%
AGAACCCCCAAGACCTTTGG+AGG - chr7_3:16436656-16436675 Msa1094530:CDS 55.0%
TCCACCTCCAAAGGTCTTGG+GGG + chr7_3:16436663-16436682 None:intergenic 55.0%
CAGCTTCGTGAGGTTGTCTC+TGG + chr7_3:16438350-16438369 None:intergenic 55.0%
GAAAAGGTAGGCGATGCTGC+TGG - chr7_3:16439017-16439036 Msa1094530:CDS 55.0%
GCAAAGAGAAGCCTGCAAGG+AGG - chr7_3:16439153-16439172 Msa1094530:CDS 55.0%
CCATGAATTCGCCTCCTTGC+AGG + chr7_3:16439167-16439186 None:intergenic 55.0%
CCTGCAAGGAGGCGAATTCA+TGG - chr7_3:16439164-16439183 Msa1094530:CDS 55.0%
GGAACTCCAGGAAGAACCGT+AGG + chr7_3:16440531-16440550 None:intergenic 55.0%
CCAGAAGGTCTTGGAACTCC+AGG + chr7_3:16440543-16440562 None:intergenic 55.0%
CCTGGAGTTCCAAGACCTTC+TGG - chr7_3:16440540-16440559 Msa1094530:intron 55.0%
TACCACCAGTTACCCTCTCG+AGG - chr7_3:16441211-16441230 Msa1094530:intron 55.0%
TACCTCGAGAGGGTAACTGG+TGG + chr7_3:16441216-16441235 None:intergenic 55.0%
CTCTACCTCGAGAGGGTAAC+TGG + chr7_3:16441219-16441238 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGTCC+TGG - chr7_3:16441698-16441717 Msa1094530:intron 55.0%
GTTATTGACGACCGGGTCGA+TGG - chr7_3:16441748-16441767 Msa1094530:intron 55.0%
GGACAGCAAGGCCTTCTAGA+AGG - chr7_3:16441983-16442002 Msa1094530:intron 55.0%
AGGAGGGGGTGGGTGAATAG+CGG - chr7_3:16435859-16435878 Msa1094530:CDS 60.0%
CACCCTTTCGTCCTCGCTTC+GGG - chr7_3:16436353-16436372 Msa1094530:CDS 60.0%
AGCCCGAAGCGAGGACGAAA+GGG + chr7_3:16436358-16436377 None:intergenic 60.0%
TAGCCCGAAGCGAGGACGAA+AGG + chr7_3:16436359-16436378 None:intergenic 60.0%
AGTAGACGTAGCCCGAAGCG+AGG + chr7_3:16436367-16436386 None:intergenic 60.0%
! ACCCCCAAGACCTTTGGAGG+TGG - chr7_3:16436659-16436678 Msa1094530:CDS 60.0%
GGGCATACACCAAACCCGCA+AGG + chr7_3:16437577-16437596 None:intergenic 60.0%
CTCTCTGTGTTCGACGGCCA+TGG + chr7_3:16440491-16440510 None:intergenic 60.0%
CGCAGCATTTGCTTGAGGCG+CGG - chr7_3:16440955-16440974 Msa1094530:intron 60.0%
GCAGCATTTGCTTGAGGCGC+GGG - chr7_3:16440956-16440975 Msa1094530:intron 60.0%
ATTGACGACCGGGTCGATGG+AGG - chr7_3:16441751-16441770 Msa1094530:intron 60.0%
AGATGCACGCTAGGAGGGGG+TGG - chr7_3:16435848-16435867 Msa1094530:CDS 65.0%
GATGCACGCTAGGAGGGGGT+GGG - chr7_3:16435849-16435868 Msa1094530:CDS 65.0%
ATTTGCTTGAGGCGCGGGCG+AGG - chr7_3:16440961-16440980 Msa1094530:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 16435517 16442048 16435517 ID=Msa1094530;Name=Msa1094530
chr7_3 mRNA 16435517 16442048 16435517 ID=Msa1094530-mRNA-1;Parent=Msa1094530;Name=Msa1094530-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.8|1|1|5|0|1217
chr7_3 exon 16441994 16442048 16441994 ID=Msa1094530-mRNA-1:exon:3675;Parent=Msa1094530-mRNA-1
chr7_3 exon 16439377 16439603 16439377 ID=Msa1094530-mRNA-1:exon:3674;Parent=Msa1094530-mRNA-1
chr7_3 exon 16438042 16439247 16438042 ID=Msa1094530-mRNA-1:exon:3673;Parent=Msa1094530-mRNA-1
chr7_3 exon 16437754 16437888 16437754 ID=Msa1094530-mRNA-1:exon:3672;Parent=Msa1094530-mRNA-1
chr7_3 exon 16435517 16437547 16435517 ID=Msa1094530-mRNA-1:exon:3671;Parent=Msa1094530-mRNA-1
chr7_3 CDS 16441994 16442048 16441994 ID=Msa1094530-mRNA-1:cds;Parent=Msa1094530-mRNA-1
chr7_3 CDS 16439377 16439603 16439377 ID=Msa1094530-mRNA-1:cds;Parent=Msa1094530-mRNA-1
chr7_3 CDS 16438042 16439247 16438042 ID=Msa1094530-mRNA-1:cds;Parent=Msa1094530-mRNA-1
chr7_3 CDS 16437754 16437888 16437754 ID=Msa1094530-mRNA-1:cds;Parent=Msa1094530-mRNA-1
chr7_3 CDS 16435517 16437547 16435517 ID=Msa1094530-mRNA-1:cds;Parent=Msa1094530-mRNA-1
Gene Sequence

>Msa1094530

ATGGCACCTAGAAAAAGGCATTTGCAACAATTGAATCCATTTGATGATGCTTACCCATTTGAAGCAATAAGGAATGACTCATGGCAACCTGTGGAGCTTATAAAAATTGAGTTTGGAAAAACAACCTTACATTTCATGGATACTCAACAAATGCAAACCCCTTTGTCATCTGATATTCGCATAAGATCAAGAAAAGCTACTTCATTTGATTGCTCTAACTTTTTACGACGCGGAATTGACATATCTATGCTCCAAATGTCAAATCGGGTTGGACCTATTCCAACGTCAATCGATGCAAGAATAAATTCAATCCAGAGACAACCTCACGAAGCTGATCAATGCTCATGTCAGTTTTATGTAAATTTCTACGAGGATCAAGGTTCCCTTGGTAGAAATATAAAAACACTTAATAAAGAGGTTTATGCGACTGGAATAGATCGAATATTTATCCTCCAAAGGCTTCAATATAATAGTTGCGAAGGCTTAATAAAAAATAGTGATAGTTCTGAAGTGGTTAAGCCTTATAGGTGGGATTCATCTGAAGATTGCTCTTCATTATCACAGTCAAGATTAGTCTTGGGGAGATTTTTATCTGACCTTTCGTGGTTCGTTACAACATCCTTTTTAAAGAAGGTTTCATTCAGTATCCGATCTATTCAAAATAAGATTGTGTATCATGTCATGGAAAACGATACTGATATTATTGATCCTTCTCTTATAAATGTTGTGAACTTCAAATCGGAAAAGGGATCAATAGTACCTGTAGTTTCTCTATTTGATATGTTTTGTGATTATGATGGAGAAGAAGATGAAACGCCGCCAATGCCATCAAATCAGATTGAAGGCCTAAGACGATCAAAACGTAGGACTGTCCAACCCAAACGTTACATAGGTTCTTCTGTTGAGAAGTTGGAAGTTGGTACTTTTCGAACGAGGCCATACAAGATAGGAGCTTATTTGATAGAGGATGGTAAGAGTGGTGAAAAGGTAGGCGATGCTGCTGGCGAAATTCCTTCAAAATATCTTTCAAAGAAGAATGGTGCTGCTGCTGGTGTTACAATATCAAGTGATTTGGAAGTTGATGATAATGTTACTTTGGGACATTATTATAGCTTCTGCAAAGAGAAGCCTGCAAGGAGGCGAATTCATGGTTCGGATGATATGGATTTTGAAACGAAATGGGAAGGGATTCGGTTCAAAAAAGGAGCTCAAACAAAAAGATACCATTCAATTTGTTTGACAAACAGAAGTAATAAAGGTGGCAGAACGTTAAATGTTGATGCACAGAAGGAAATAATTGACACTTACATGAAGAATTTGGATAGTCTTCCGGCTGAAGAAGAGCCAATTATAAATGAAGAAACAAAGTTGGAGGAAGAAAAAGTGTCGAAAAGCGATGATGAGGAAGAAAATCCAGATGACTTGTCTGCCATTTGGGAAGAAATGGATACTGCTATGGCAGCAAGTTGTCTTCTTGATGGAACTGAGGGTTCAAATGTAGAGGTTTTAGCAGACACCAATGAAATTTGTGAACATGACTATACGTTCAATGAAGAAATTGGAATATTCTGTACTAGCTGTGGCTCTGTGAAAACTGAGATACGAGACATTACTGAACTCGTTGTGGAAAGACAAAAATGGCAGAAAGAGGAGAAACAATACAGTGGAGAAGTTAATGATGAACAAAAATCAGAGGCAAAAGTTGATGAAGATGATAATAATGATATGTTCTCGACTCATGCTACTGATCGTGATGAACCAATACCTGCAGAAAAAGACAATGTTTGGGAATTGATTCCAGAACTCAAAGAAAAGATGCATGCGCACCAGCAAAAAGCTTTTGAGTTTCTTTGGAAAAACATTGCTGGCTCCATGGAACCATCCCTCATGCAAGAAAGATCGGAAACAAGTGGTGGATGTGTCATATCACATGCTCCTGGAGCTGGAAAAACCTTTCTCGTCATTTCGTTTCTTGTAAGTTACTTGAAGTTATTTCCTGGGAAAAGACCATTAGTCCTTGCACCAAAATCCACACTTTACACATGGTGCAAAGAGTTCAAAAAATGGAAAGTTCCCGTGCCTGTGTATCTTATCCATGGCCGTCGAACACAGAGAGATTCAACGGCTCCAAAACCTACGGTTCTTCCTGGAGTTCCAAGACCTTCTGGTGATGTAAAACATGTTTTGGATTGTCTTGGAAAAATAAAAAAGTGGCATTCACACCCAAGTGTTCTTGTCATGGGCTATACTTCATTTTTAGCCTTAATGAGACAAGATACAAAATTTGCACACAGAAAGTACATGGCCAAAACTTTGAGAGAAAGCCCTGGAATCATGATACTTGATGAAGGTCACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGCTTAATGGAACTTCCTACAGAATTGAGGATTTTACTTTCTGGCACTTTGTTTCAGAACAATTTCTGCGAATATTTCAACACATTGTGTTTAGCAAGACCAAAATTTGTTCACGAAGTGCTACGAGAGTTAGATTCTAAATACTTGAGGAGAGGTAATAGAGAGAAGAAAGCGCAGCATTTGCTTGAGGCGCGGGCGAGGAAATTCTTCTTGAACAACATTGCTACGAAAATCAACTCAGATAACGATGAGGAAAAAATGCAGGGTCTACATGTGCTGCGAAAGATCACGAGCAGTTTCATCAACGTTTATGAAAGTGGAAATTCCTCTGATACACTTCCTGGTTTACAAATATATACACTGTTCATGAATACGTCCGATGAACAGCTTGAGATTATACAGAAACTGCAGAAGAAAATGGCTGAGTGTACCACCAGTTACCCTCTCGAGGTAGAGCTTTTGATAACCCTTGGATCGATACATCCATGGTTGATCAAAACAGCAACACCATGTGCAGATAAGTTTTTTGCCGAAGATGAATTGAAGAGGCTAGACGGAATCAAATTTGATTTAAGAAAAGGTTCCAAAATAAGATTTGTTCTGAGCCTAATCTCACGTGTAGTGAAAAATGAAAAGGTTCTTATCTTTTGTCACTACCTTGCACCTCTGAGATTTTTCATAGAGTTATTTGAGAAATACTTTCAATGGCAAAATGGAAAAGAGGTTCTGCTACTTACTGGTGATCTAGATTTGTTTGAAAGAGGAAAAATGATTGATAAGTTTGAAGATCCTCGCAGCGGTTCAAAGATACTTCTGGCTTCAATCAACGCTTGTGCTGAAGGTATTAGTTTAACAGCTGCTTCTAGAGTGATATTTTTGGATTCTGAATGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGTCCTGGTCAGCAAAAAATGGTTTATGTGTATCAGTTATTGACGACCGGGTCGATGGAGGAAGATAAGTATCGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCGAAATGGCAAGCAGAAAAGATTGAAGATGAAATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCATATGATTATGAAGAATGAAAAGGATTCCGTAACGAATATGCCTCGTGATACAGAAGGACAGCAAGGCCTTCTAGAAGGATCAGATTTGGTTATGCAAGAGCCACAGTCTGTTAGGCACTAG
Protein sequence

>Msa1094530

MAPRKRHLQQLNPFDDAYPFEAIRNDSWQPVELIKIEFGKTTLHFMDTQQMQTPLSSDIRIRSRKATSFDCSNFLRRGIDISMLQMSNRVGPIPTSIDARINSIQRQPHEADQCSCQFYVNFYEDQGSLGRNIKTLNKEVYATGIDRIFILQRLQYNSCEGLIKNSDSSEVVKPYRWDSSEDCSSLSQSRLVLGRFLSDLSWFVTTSFLKKVSFSIRSIQNKIVYHVMENDTDIIDPSLINVVNFKSEKGSIVPVVSLFDMFCDYDGEEDETPPMPSNQIEGLRRSKRRTVQPKRYIGSSVEKLEVGTFRTRPYKIGAYLIEDGKSGEKVGDAAGEIPSKYLSKKNGAAAGVTISSDLEVDDNVTLGHYYSFCKEKPARRRIHGSDDMDFETKWEGIRFKKGAQTKRYHSICLTNRSNKGGRTLNVDAQKEIIDTYMKNLDSLPAEEEPIINEETKLEEEKVSKSDDEEENPDDLSAIWEEMDTAMAASCLLDGTEGSNVEVLADTNEICEHDYTFNEEIGIFCTSCGSVKTEIRDITELVVERQKWQKEEKQYSGEVNDEQKSEAKVDEDDNNDMFSTHATDRDEPIPAEKDNVWELIPELKEKMHAHQQKAFEFLWKNIAGSMEPSLMQERSETSGGCVISHAPGAGKTFLVISFLVSYLKLFPGKRPLVLAPKSTLYTWCKEFKKWKVPVPVYLIHGRRTQRDSTAPKPTVLPGVPRPSGDVKHVLDCLGKIKKWHSHPSVLVMGYTSFLALMRQDTKFAHRKYMAKTLRESPGIMILDEGHNPRSTKSRLRKCLMELPTELRILLSGTLFQNNFCEYFNTLCLARPKFVHEVLRELDSKYLRRGNREKKAQHLLEARARKFFLNNIATKINSDNDEEKMQGLHVLRKITSSFINVYESGNSSDTLPGLQIYTLFMNTSDEQLEIIQKLQKKMAECTTSYPLEVELLITLGSIHPWLIKTATPCADKFFAEDELKRLDGIKFDLRKGSKIRFVLSLISRVVKNEKVLIFCHYLAPLRFFIELFEKYFQWQNGKEVLLLTGDLDLFERGKMIDKFEDPRSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDEILREMVEEDKSKAIHMIMKNEKDSVTNMPRDTEGQQGLLEGSDLVMQEPQSVRH*