Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100020 | XP_003621144.1 | 98.512 | 672 | 10 | 0 | 1 | 672 | 1 | 672 | 0.0 | 1369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100020 | sp|B9RUN8|GUF1_RICCO | 80.088 | 678 | 124 | 4 | 1 | 672 | 1 | 673 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100020 | G7KZV0 | 98.512 | 672 | 10 | 0 | 1 | 672 | 1 | 672 | 0.0 | 1369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0212930 | Msa1100020 | 0.800662 | 1.297393e-48 | -8.615850e-47 |
| Msa1041670 | Msa1100020 | 0.800835 | 1.196355e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100020 | MtrunA17_Chr7g0216911 | 98.512 | 672 | 10 | 0 | 1 | 672 | 1 | 672 | 0.0 | 1369 |
| Msa1100020 | MtrunA17_Chr3g0130991 | 51.159 | 647 | 293 | 5 | 34 | 671 | 41 | 673 | 0.0 | 654 |
| Msa1100020 | MtrunA17_Chr1g0173551 | 25.763 | 590 | 344 | 21 | 7 | 554 | 15 | 552 | 1.51e-33 | 137 |
| Msa1100020 | MtrunA17_Chr4g0040791 | 31.907 | 257 | 133 | 5 | 64 | 296 | 54 | 292 | 1.61e-28 | 121 |
| Msa1100020 | MtrunA17_Chr2g0311941 | 40.881 | 159 | 84 | 4 | 54 | 208 | 10 | 162 | 3.71e-25 | 111 |
| Msa1100020 | MtrunA17_Chr2g0311931 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 6.42e-24 | 107 |
| Msa1100020 | MtrunA17_Chr1g0170011 | 40.972 | 144 | 83 | 2 | 67 | 208 | 19 | 162 | 1.55e-23 | 106 |
| Msa1100020 | MtrunA17_Chr7g0231931 | 36.145 | 166 | 81 | 3 | 65 | 222 | 60 | 208 | 2.75e-22 | 102 |
| Msa1100020 | MtrunA17_Chr4g0066951 | 37.241 | 145 | 73 | 3 | 67 | 208 | 14 | 143 | 9.94e-20 | 94.4 |
| Msa1100020 | MtrunA17_Chr4g0065151 | 34.899 | 149 | 83 | 3 | 64 | 208 | 136 | 274 | 1.24e-17 | 87.4 |
| Msa1100020 | MtrunA17_Chr2g0286711 | 35.542 | 166 | 82 | 4 | 65 | 222 | 53 | 201 | 1.17e-16 | 84.0 |
| Msa1100020 | MtrunA17_Chr4g0056591 | 31.285 | 179 | 98 | 4 | 38 | 212 | 68 | 225 | 6.32e-15 | 78.6 |
| Msa1100020 | MtrunA17_Chr2g0312621 | 25.547 | 274 | 164 | 7 | 47 | 311 | 480 | 722 | 1.66e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100020 | AT5G39900.1 | 77.596 | 674 | 138 | 6 | 1 | 672 | 1 | 663 | 0.0 | 1059 |
| Msa1100020 | AT5G08650.1 | 51.550 | 613 | 283 | 4 | 59 | 671 | 78 | 676 | 0.0 | 622 |
| Msa1100020 | AT5G08650.2 | 49.270 | 548 | 264 | 4 | 59 | 606 | 78 | 611 | 0.0 | 538 |
| Msa1100020 | AT5G13650.2 | 26.439 | 556 | 323 | 21 | 34 | 554 | 49 | 553 | 1.78e-37 | 149 |
| Msa1100020 | AT5G13650.1 | 26.923 | 520 | 299 | 19 | 67 | 554 | 82 | 552 | 2.63e-37 | 148 |
| Msa1100020 | AT2G31060.2 | 26.337 | 505 | 291 | 14 | 60 | 528 | 52 | 511 | 7.49e-31 | 129 |
| Msa1100020 | AT2G31060.3 | 26.130 | 509 | 291 | 15 | 60 | 528 | 52 | 515 | 4.18e-29 | 123 |
| Msa1100020 | AT1G56070.3 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.58e-23 | 106 |
| Msa1100020 | AT1G56070.2 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.58e-23 | 106 |
| Msa1100020 | AT1G56070.1 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 1.58e-23 | 106 |
| Msa1100020 | AT3G12915.2 | 40.972 | 144 | 83 | 2 | 67 | 208 | 19 | 162 | 6.36e-23 | 104 |
| Msa1100020 | AT3G22980.1 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.56e-21 | 99.8 |
| Msa1100020 | AT3G22980.3 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.56e-21 | 99.8 |
| Msa1100020 | AT3G22980.2 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.56e-21 | 99.8 |
| Msa1100020 | AT1G06220.1 | 36.242 | 149 | 81 | 2 | 64 | 208 | 135 | 273 | 4.83e-20 | 95.9 |
| Msa1100020 | AT1G06220.3 | 36.242 | 149 | 81 | 2 | 64 | 208 | 135 | 273 | 4.83e-20 | 95.9 |
| Msa1100020 | AT1G06220.2 | 36.242 | 149 | 81 | 2 | 64 | 208 | 135 | 273 | 4.83e-20 | 95.9 |
| Msa1100020 | AT1G45332.1 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.04e-20 | 95.1 |
| Msa1100020 | AT2G45030.1 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.25e-20 | 95.1 |
| Msa1100020 | AT5G25230.2 | 34.899 | 149 | 83 | 2 | 64 | 208 | 121 | 259 | 1.49e-18 | 90.9 |
| Msa1100020 | AT5G25230.1 | 34.899 | 149 | 83 | 2 | 64 | 208 | 121 | 259 | 1.49e-18 | 90.9 |
| Msa1100020 | AT1G62750.1 | 32.886 | 149 | 80 | 3 | 68 | 212 | 97 | 229 | 6.31e-14 | 75.9 |
| Msa1100020 | AT4G11160.2 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 3.09e-13 | 73.6 |
| Msa1100020 | AT4G11160.3 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 3.16e-13 | 73.2 |
| Msa1100020 | AT4G11160.1 | 26.070 | 257 | 148 | 6 | 47 | 296 | 204 | 425 | 3.16e-13 | 73.6 |
Find 158 sgRNAs with CRISPR-Local
Find 593 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTATTATGGCGAAATTT+TGG | 0.100738 | 7_3:+29383616 | Msa1100020:three_prime_UTR |
| AGAGGCTAATTTCATTATTA+TGG | 0.189569 | 7_3:+29383605 | Msa1100020:three_prime_UTR |
| TACTCTTGCTGATCGGTTAT+TGG | 0.191782 | 7_3:+29374390 | Msa1100020:CDS |
| TAAAGTTGCGCATTAGATTT+TGG | 0.195694 | 7_3:+29383213 | Msa1100020:three_prime_UTR |
| GCTGATCCCGACCGTGTTAA+AGG | 0.198926 | 7_3:+29377169 | Msa1100020:CDS |
| ATCTCCAATGCGTGCCTCTT+TGG | 0.244319 | 7_3:-29377551 | None:intergenic |
| ATCTATAATGGCTTTCTCTT+TGG | 0.258630 | 7_3:-29374299 | None:intergenic |
| CTTTCTCTTTGGTGTTGTTT+TGG | 0.269768 | 7_3:-29374288 | None:intergenic |
| TTCTATAAGAATATCATAAA+TGG | 0.270398 | 7_3:+29376911 | Msa1100020:CDS |
| AATTTACTTTGCTGCTTTCA+TGG | 0.275772 | 7_3:+29383467 | Msa1100020:three_prime_UTR |
| GTTGATGTGGAACCTCTTCC+AGG | 0.292304 | 7_3:+29377598 | Msa1100020:CDS |
| TTTCTAAGAAAACCCATTTC+GGG | 0.305506 | 7_3:-29374142 | None:intergenic |
| TTGCTAACATCGGCTAAAAC+TGG | 0.312340 | 7_3:+29377232 | Msa1100020:CDS |
| TACACGAAAGAAGAAGCTTT+TGG | 0.312536 | 7_3:+29383086 | Msa1100020:CDS |
| TCATACGAAGCTATGGATAT+AGG | 0.321682 | 7_3:+29377448 | Msa1100020:CDS |
| CTGCTCTAGGTCTAGGGTTC+AGG | 0.327618 | 7_3:+29378376 | Msa1100020:CDS |
| CAAGTTGGTTACGTTATAAC+TGG | 0.348220 | 7_3:+29377517 | Msa1100020:CDS |
| TCAGTATCTTGATAAATTGC+AGG | 0.349168 | 7_3:+29374450 | Msa1100020:CDS |
| ACGAAACCTTCAATAGTTCA+TGG | 0.351084 | 7_3:-29383176 | None:intergenic |
| TGCTTGTCAGGGCGTGCTTT+TGG | 0.352582 | 7_3:+29377036 | Msa1100020:CDS |
| GATCAAACATTGATTTCAAT+TGG | 0.356678 | 7_3:-29377192 | None:intergenic |
| TCGGAATACTCATAGATATA+AGG | 0.362737 | 7_3:-29378839 | None:intergenic |
| TGCCATGTTGCTGTCGTTGA+TGG | 0.371153 | 7_3:+29377379 | Msa1100020:CDS |
| CTATGCATCATTTGATTATG+AGG | 0.373945 | 7_3:+29381447 | Msa1100020:CDS |
| CATACGAAGCTATGGATATA+GGG | 0.376118 | 7_3:+29377449 | Msa1100020:CDS |
| TGTTTGTGTAAACAGGAATA+TGG | 0.376872 | 7_3:+29378785 | Msa1100020:intron |
| GAGGTCACTAGCTGCTTGTC+AGG | 0.379245 | 7_3:+29377024 | Msa1100020:CDS |
| TGGGTTATTCTACTTGATAA+AGG | 0.383459 | 7_3:-29374220 | None:intergenic |
| GGGTTATTCTACTTGATAAA+GGG | 0.385895 | 7_3:-29374219 | None:intergenic |
| CCTACTGGAGTCTTGTATAC+TGG | 0.391279 | 7_3:+29377493 | Msa1100020:CDS |
| GAGCGTATACCTCCGCCTCC+TGG | 0.396452 | 7_3:+29377289 | Msa1100020:CDS |
| GAGAAATTTCTCACAAGCTC+TGG | 0.408314 | 7_3:-29374337 | None:intergenic |
| CATCCTGAACTTACGCCTAC+TGG | 0.410042 | 7_3:+29377478 | Msa1100020:CDS |
| AGCGTTCCATGAACTATTGA+AGG | 0.411225 | 7_3:+29383170 | Msa1100020:CDS |
| TGTCTTAGGTGGAGAGAGAA+AGG | 0.419115 | 7_3:+29376855 | Msa1100020:intron |
| CTTCAAAGCAGCAAAACATA+TGG | 0.421700 | 7_3:+29378242 | Msa1100020:CDS |
| CACCCTTCTCTCCGAGCGTA+GGG | 0.423710 | 7_3:+29379153 | Msa1100020:CDS |
| TGATCGGTTATTGGAACTTA+CGG | 0.425650 | 7_3:+29374399 | Msa1100020:CDS |
| ACTAGCACTGCTCTAGGTCT+AGG | 0.427464 | 7_3:+29378369 | Msa1100020:CDS |
| CAGGCTACCACTCGTTGCTT+GGG | 0.430966 | 7_3:-29378980 | None:intergenic |
| ACAGGCTACCACTCGTTGCT+TGG | 0.433082 | 7_3:-29378981 | None:intergenic |
| GAAGTATCGTCTTCCTTTGA+GGG | 0.433212 | 7_3:+29381378 | Msa1100020:CDS |
| AAACTTGATATTCTCTTGAA+TGG | 0.433950 | 7_3:+29382367 | Msa1100020:CDS |
| GTACTGACTCAAATCTATAA+TGG | 0.434180 | 7_3:-29374311 | None:intergenic |
| ATAAATCGAATAAGAAGAAA+TGG | 0.435027 | 7_3:+29383437 | Msa1100020:three_prime_UTR |
| TGCTAACATCGGCTAAAACT+GGG | 0.444983 | 7_3:+29377233 | Msa1100020:CDS |
| TGAAGTATCGTCTTCCTTTG+AGG | 0.445367 | 7_3:+29381377 | Msa1100020:CDS |
| ACAGAAAAGTGCACGTGTAA+TGG | 0.445676 | 7_3:-29374254 | None:intergenic |
| GCAACGAGTGGTAGCCTGTT+GGG | 0.445716 | 7_3:+29378985 | Msa1100020:CDS |
| GTGTAATGGAAAATCTTTGA+TGG | 0.449154 | 7_3:-29374240 | None:intergenic |
| GATCGGTTATTGGAACTTAC+GGG | 0.450204 | 7_3:+29374400 | Msa1100020:CDS |
| TAAGATTTCTTCGGCGGCCA+CGG | 0.457579 | 7_3:+29377420 | Msa1100020:CDS |
| ATCATTGCACATGTTGATCA+TGG | 0.464136 | 7_3:+29374361 | Msa1100020:CDS |
| ATGTTTATTACAAAAGATCA+TGG | 0.465871 | 7_3:-29383680 | None:intergenic |
| CGTTGATGGTGCCCTGCGCA+AGG | 0.466416 | 7_3:+29377393 | Msa1100020:CDS |
| GTCTTAGGTGGAGAGAGAAA+GGG | 0.466839 | 7_3:+29376856 | Msa1100020:intron |
| TCGGAGAGAAGGGTGATAAC+AGG | 0.470239 | 7_3:-29379145 | None:intergenic |
| AATGTTCTTGCCAAGTGTTA+TGG | 0.470456 | 7_3:+29383054 | Msa1100020:CDS |
| TATTACTGTGGGTTCCCAAC+AGG | 0.471236 | 7_3:-29378999 | None:intergenic |
| TTGATGGTGCCCTGCGCAAG+GGG | 0.472833 | 7_3:+29377395 | Msa1100020:CDS |
| TGGAGTACTCGTTCATTGAC+AGG | 0.474578 | 7_3:+29379185 | Msa1100020:CDS |
| TGATCTATCTTATTTATGAC+AGG | 0.475524 | 7_3:-29377139 | None:intergenic |
| AATTGCTAAGTTAGATTCAA+AGG | 0.477085 | 7_3:-29377113 | None:intergenic |
| TTGGTTGTTGATGCTGCTCA+AGG | 0.478306 | 7_3:+29377055 | Msa1100020:CDS |
| CAGTTATCAACCATCTGATC+TGG | 0.482709 | 7_3:+29382342 | Msa1100020:intron |
| ATATCGTGTTGGGCGTGAAT+TGG | 0.484300 | 7_3:+29382435 | Msa1100020:CDS |
| AATTGGCCTTTAACACGGTC+GGG | 0.487568 | 7_3:-29377175 | None:intergenic |
| CACCCCTACGCTCGGAGAGA+AGG | 0.488795 | 7_3:-29379156 | None:intergenic |
| GGATTAGACGGTAATGCAGC+AGG | 0.489291 | 7_3:-29378959 | None:intergenic |
| ACTCGAAATCATATCGTGTT+GGG | 0.489815 | 7_3:+29382425 | Msa1100020:CDS |
| TTGTTTGATCTAAGGTATGT+TGG | 0.494037 | 7_3:+29379121 | Msa1100020:intron |
| TTCTTCTTATTCGATTTATG+TGG | 0.499474 | 7_3:-29383433 | None:intergenic |
| CTCAGTTGTGGAATTAGCTA+TGG | 0.501959 | 7_3:+29383404 | Msa1100020:three_prime_UTR |
| GGTATACGCTCTATAACTGC+TGG | 0.507876 | 7_3:-29377277 | None:intergenic |
| GGCACTATTAAGAAAGGACT+TGG | 0.508945 | 7_3:+29374421 | Msa1100020:CDS |
| ACTCCAGTAGGCGTAAGTTC+AGG | 0.509737 | 7_3:-29377481 | None:intergenic |
| TCAAAATCAGATCCATCAGC+TGG | 0.514059 | 7_3:-29378282 | None:intergenic |
| TAATCATACAAGCCGCCATT+GGG | 0.514147 | 7_3:+29382595 | Msa1100020:CDS |
| TTGAATCTTATTGACACACC+TGG | 0.514281 | 7_3:+29376974 | Msa1100020:CDS |
| AACTCGAAATCATATCGTGT+TGG | 0.515260 | 7_3:+29382424 | Msa1100020:CDS |
| TCACCCTTCTCTCCGAGCGT+AGG | 0.515817 | 7_3:+29379152 | Msa1100020:CDS |
| AAAGAAACTAGCACTGCTCT+AGG | 0.519512 | 7_3:+29378363 | Msa1100020:CDS |
| AGCGTATACCTCCGCCTCCT+GGG | 0.519604 | 7_3:+29377290 | Msa1100020:CDS |
| TCTTAGGTGGAGAGAGAAAG+GGG | 0.520345 | 7_3:+29376857 | Msa1100020:intron |
| GGGTAAATCATACGAAGCTA+TGG | 0.531494 | 7_3:+29377441 | Msa1100020:CDS |
| TCACTCTTCCCAGGAGGCGG+AGG | 0.532337 | 7_3:-29377298 | None:intergenic |
| TACTAAAAGCACTGTTGATG+TGG | 0.532665 | 7_3:+29377585 | Msa1100020:CDS |
| AAATTTCTCACAAGCTCTGG+TGG | 0.532728 | 7_3:-29374334 | None:intergenic |
| GTCTTGTATACTGGACAAGT+TGG | 0.533279 | 7_3:+29377502 | Msa1100020:CDS |
| AATTGAAGAAAGTCATAGAC+AGG | 0.535063 | 7_3:+29382464 | Msa1100020:CDS |
| CAATTGGCCTTTAACACGGT+CGG | 0.536159 | 7_3:-29377176 | None:intergenic |
| TCGTGTTGGGCGTGAATTGG+TGG | 0.536800 | 7_3:+29382438 | Msa1100020:CDS |
| CGAGCGTAGGGGTGAACAGT+TGG | 0.539526 | 7_3:+29379165 | Msa1100020:CDS |
| TGTAATGGAAAATCTTTGAT+GGG | 0.540161 | 7_3:-29374239 | None:intergenic |
| GATTCACTCTTCCCAGGAGG+CGG | 0.540294 | 7_3:-29377301 | None:intergenic |
| TTTGTTAATCTACCTTCCAT+CGG | 0.542249 | 7_3:-29378858 | None:intergenic |
| TCAATAACAATTTCCCTCAA+AGG | 0.543263 | 7_3:-29381391 | None:intergenic |
| GATGTTAGCAATGCATCACT+CGG | 0.543356 | 7_3:-29377220 | None:intergenic |
| CTAGCACTGCTCTAGGTCTA+GGG | 0.546049 | 7_3:+29378370 | Msa1100020:CDS |
| CGCTTCTTGTGGTACATCAA+CGG | 0.548934 | 7_3:-29383151 | None:intergenic |
| GTTGATGGTGCCCTGCGCAA+GGG | 0.550686 | 7_3:+29377394 | Msa1100020:CDS |
| CTTACGGGCACTATTAAGAA+AGG | 0.551233 | 7_3:+29374415 | Msa1100020:CDS |
| TCAAGTTTCACCAGATCAGA+TGG | 0.552288 | 7_3:-29382352 | None:intergenic |
| ACCCCTACGCTCGGAGAGAA+GGG | 0.555245 | 7_3:-29379155 | None:intergenic |
| ACACGGTCGGGATCAGCAGT+TGG | 0.557738 | 7_3:-29377163 | None:intergenic |
| ATAATCGCTTTACCTGGAAG+AGG | 0.558971 | 7_3:-29377610 | None:intergenic |
| ATAATCATACAAGCCGCCAT+TGG | 0.562406 | 7_3:+29382594 | Msa1100020:CDS |
| ATGTAAGCTTCTCTATTGCA+TGG | 0.563360 | 7_3:-29378314 | None:intergenic |
| TATATCTATGAGTATTCCGA+TGG | 0.567155 | 7_3:+29378842 | Msa1100020:CDS |
| ACAACCAAAGAGGCACGCAT+TGG | 0.568702 | 7_3:+29377547 | Msa1100020:CDS |
| TAACTGAAATCTACATGCCC+AGG | 0.572583 | 7_3:-29376992 | None:intergenic |
| CCAGTATACAAGACTCCAGT+AGG | 0.573750 | 7_3:-29377493 | None:intergenic |
| TGATTTCGAGTTATGAACAA+TGG | 0.578989 | 7_3:-29382413 | None:intergenic |
| AATGGTGGTGATTCTAACGA+TGG | 0.584529 | 7_3:+29376929 | Msa1100020:CDS |
| TTCTTTAGTGACAGAGACGC+TGG | 0.585816 | 7_3:-29378346 | None:intergenic |
| GAATTGAAGAGTATAACATC+AGG | 0.586284 | 7_3:+29381424 | Msa1100020:CDS |
| TGTGCAAGAGCTTACTCACT+AGG | 0.587619 | 7_3:-29379037 | None:intergenic |
| AAAGAAGATTCACTCTTCCC+AGG | 0.588401 | 7_3:-29377307 | None:intergenic |
| ACATCGGCTAAAACTGGGGT+GGG | 0.588454 | 7_3:+29377238 | Msa1100020:CDS |
| ACTCGTTGCTTGGGATTAGA+CGG | 0.592284 | 7_3:-29378971 | None:intergenic |
| CTAAGTTAGATTCAAAGGCA+AGG | 0.592310 | 7_3:-29377108 | None:intergenic |
| GTTCTCATAAAACTCAGTTG+TGG | 0.592663 | 7_3:+29383392 | Msa1100020:three_prime_UTR |
| AGCAACGAGTGGTAGCCTGT+TGG | 0.593264 | 7_3:+29378984 | Msa1100020:CDS |
| GATATAAGGCACGGTAGGAA+CGG | 0.596165 | 7_3:-29378825 | None:intergenic |
| TGGTGATTCTAACGATGGAA+AGG | 0.596301 | 7_3:+29376934 | Msa1100020:CDS |
| AATATCACCACCATAACACT+TGG | 0.596925 | 7_3:-29383064 | None:intergenic |
| ATTTCAATTGGCCTTTAACA+CGG | 0.596965 | 7_3:-29377180 | None:intergenic |
| AACATCGGCTAAAACTGGGG+TGG | 0.597452 | 7_3:+29377237 | Msa1100020:CDS |
| AACTATAGTAGCTATTACTG+TGG | 0.603566 | 7_3:-29379011 | None:intergenic |
| CAACTGTTCACCCCTACGCT+CGG | 0.605883 | 7_3:-29379164 | None:intergenic |
| TCATAGATATAAGGCACGGT+AGG | 0.607140 | 7_3:-29378830 | None:intergenic |
| GATTGAAACTGAGCTTCAAG+AGG | 0.609012 | 7_3:+29383587 | Msa1100020:three_prime_UTR |
| TGAATCTTATTGACACACCT+GGG | 0.609608 | 7_3:+29376975 | Msa1100020:CDS |
| GAAAATCTACTCTTGCTGAT+CGG | 0.612484 | 7_3:+29374383 | Msa1100020:CDS |
| ACTATAGTAGCTATTACTGT+GGG | 0.615089 | 7_3:-29379010 | None:intergenic |
| AGTTCATGGAACGCTTCTTG+TGG | 0.617418 | 7_3:-29383162 | None:intergenic |
| TCTATGAGTATTCCGATGGA+AGG | 0.618329 | 7_3:+29378846 | Msa1100020:CDS |
| GCTAACATCGGCTAAAACTG+GGG | 0.618963 | 7_3:+29377234 | Msa1100020:CDS |
| AGGTCACTAGCTGCTTGTCA+GGG | 0.619119 | 7_3:+29377025 | Msa1100020:CDS |
| CACCATCAACGACAGCAACA+TGG | 0.620893 | 7_3:-29377381 | None:intergenic |
| TCTCTTGAATGGTCAAGCAG+TGG | 0.623026 | 7_3:+29382378 | Msa1100020:CDS |
| TATAAGAATATCATAAATGG+TGG | 0.628327 | 7_3:+29376914 | Msa1100020:CDS |
| ATTTCAGTTACGAAGTGTCG+AGG | 0.630243 | 7_3:+29377005 | Msa1100020:CDS |
| AATTTCTCACAAGCTCTGGT+GGG | 0.640012 | 7_3:-29374333 | None:intergenic |
| TGCAATTTATCAAGATACTG+AGG | 0.641130 | 7_3:-29374448 | None:intergenic |
| TGGTCAAGCAGTGGATGCAA+TGG | 0.648929 | 7_3:+29382387 | Msa1100020:CDS |
| ACCCTTCTCTCCGAGCGTAG+GGG | 0.652924 | 7_3:+29379154 | Msa1100020:CDS |
| TGATGGTGCCCTGCGCAAGG+GGG | 0.653669 | 7_3:+29377396 | Msa1100020:CDS |
| GTCTAATCCCAAGCAACGAG+TGG | 0.653785 | 7_3:+29378973 | Msa1100020:CDS |
| ATGTTAGCAATGCATCACTC+GGG | 0.657087 | 7_3:-29377219 | None:intergenic |
| TGGCATGCGGACAACCAAAG+AGG | 0.669414 | 7_3:+29377537 | Msa1100020:CDS |
| GTTCTTGCCAAGTGTTATGG+TGG | 0.678954 | 7_3:+29383057 | Msa1100020:CDS |
| GCACTATTAAGAAAGGACTT+GGG | 0.682333 | 7_3:+29374422 | Msa1100020:CDS |
| GTTACGTTATAACTGGCATG+CGG | 0.687953 | 7_3:+29377524 | Msa1100020:CDS |
| AGCTTCGTATGATTTACCCG+TGG | 0.696545 | 7_3:-29377437 | None:intergenic |
| GAGTGATGCATTGCTAACAT+CGG | 0.698424 | 7_3:+29377222 | Msa1100020:CDS |
| ATACTCATAGATATAAGGCA+CGG | 0.704357 | 7_3:-29378834 | None:intergenic |
| GAAGATTCACTCTTCCCAGG+AGG | 0.718205 | 7_3:-29377304 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATGTTATATGAAAT+GGG | + | chr7_3:29374530-29374549 | Msa1100020:intron | 10.0% |
| !!! | TGAAAATTTTGAAATTTTAT+TGG | + | chr7_3:29374630-29374649 | Msa1100020:intron | 10.0% |
| !!! | TGATAATAATTTGTAAAAAT+AGG | + | chr7_3:29374706-29374725 | Msa1100020:intron | 10.0% |
| !! | ATTAAGAATTAAAGAAAATT+CGG | - | chr7_3:29378205-29378224 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTGAAACATATT+TGG | + | chr7_3:29378441-29378460 | Msa1100020:intron | 10.0% |
| !! | TATTAATAAAATAGAAACTT+TGG | - | chr7_3:29379226-29379245 | None:intergenic | 10.0% |
| !! | AAAAAAAAACTTAATGAAAT+TGG | - | chr7_3:29382190-29382209 | None:intergenic | 10.0% |
| !!! | AATTTTTTGTTTTTGTATCT+GGG | + | chr7_3:29374499-29374518 | Msa1100020:intron | 15.0% |
| !! | GTTTATAATGTTATATGAAA+TGG | + | chr7_3:29374529-29374548 | Msa1100020:intron | 15.0% |
| !!! | AATTATCAATTTTTTCATCT+GGG | + | chr7_3:29375181-29375200 | Msa1100020:intron | 15.0% |
| !! | AAAAAATCTTGAAATTTGAT+TGG | + | chr7_3:29375325-29375344 | Msa1100020:intron | 15.0% |
| !!! | ATTGTATTTTTCAAAATTGT+TGG | + | chr7_3:29375909-29375928 | Msa1100020:intron | 15.0% |
| !! | TTTGGATAAACAATTTAATT+AGG | - | chr7_3:29376764-29376783 | None:intergenic | 15.0% |
| !! | ATTAAATTGTTTATCCAAAA+TGG | + | chr7_3:29376765-29376784 | Msa1100020:intron | 15.0% |
| !! | TTCTATAAGAATATCATAAA+TGG | + | chr7_3:29376911-29376930 | Msa1100020:CDS | 15.0% |
| !!! | TTTCTTTTTTATATTCTATC+AGG | + | chr7_3:29378489-29378508 | Msa1100020:intron | 15.0% |
| !!! | TAAGCTTGTTTTTATATTAT+TGG | + | chr7_3:29378681-29378700 | Msa1100020:intron | 15.0% |
| !!! | AAGCTTGTTTTTATATTATT+GGG | + | chr7_3:29378682-29378701 | Msa1100020:intron | 15.0% |
| !!! | ATTAATTGGTTTTTTGAAAA+GGG | - | chr7_3:29379677-29379696 | None:intergenic | 15.0% |
| !!! | AATTAATTGGTTTTTTGAAA+AGG | - | chr7_3:29379678-29379697 | None:intergenic | 15.0% |
| !!! | ATTCACTTTTTCTTTTTAAT+GGG | - | chr7_3:29381763-29381782 | None:intergenic | 15.0% |
| !!! | AATTCACTTTTTCTTTTTAA+TGG | - | chr7_3:29381764-29381783 | None:intergenic | 15.0% |
| !! | AACAAAAGATAAAATAAAGT+CGG | - | chr7_3:29381995-29382014 | None:intergenic | 15.0% |
| !!! | AACGAAATTTGATTGTTTTA+AGG | - | chr7_3:29374179-29374198 | None:intergenic | 20.0% |
| !!! | GAATTTTTTGTTTTTGTATC+TGG | + | chr7_3:29374498-29374517 | Msa1100020:intron | 20.0% |
| !!! | GAATTATCAATTTTTTCATC+TGG | + | chr7_3:29375180-29375199 | Msa1100020:intron | 20.0% |
| !! | ATAATATGTAGAACCTAAAA+TGG | + | chr7_3:29375394-29375413 | Msa1100020:intron | 20.0% |
| !!! | ATGTTTTCAATCTGAATTAT+TGG | + | chr7_3:29375638-29375657 | Msa1100020:intron | 20.0% |
| !! | TTTGTAATGTTATGTGAAAT+AGG | + | chr7_3:29375885-29375904 | Msa1100020:intron | 20.0% |
| !!! | CTTATAATAACTTGTCAATA+TGG | + | chr7_3:29376065-29376084 | Msa1100020:intron | 20.0% |
| !!! | TTCATAAACTTTTTAGGATT+AGG | + | chr7_3:29376327-29376346 | Msa1100020:intron | 20.0% |
| !!! | TCATAAACTTTTTAGGATTA+GGG | + | chr7_3:29376328-29376347 | Msa1100020:intron | 20.0% |
| !!! | TAAGTATATTACATCTTTTC+TGG | - | chr7_3:29376535-29376554 | None:intergenic | 20.0% |
| !! | AGAAAAGATGTAATATACTT+AGG | + | chr7_3:29376534-29376553 | Msa1100020:intron | 20.0% |
| !! | GAAAAGATGTAATATACTTA+GGG | + | chr7_3:29376535-29376554 | Msa1100020:intron | 20.0% |
| !! | AAAAGATGTAATATACTTAG+GGG | + | chr7_3:29376536-29376555 | Msa1100020:intron | 20.0% |
| !! | TTGAAAAAGGTCTAATAAAA+AGG | + | chr7_3:29376597-29376616 | Msa1100020:intron | 20.0% |
| !! | TGAAAAAGGTCTAATAAAAA+GGG | + | chr7_3:29376598-29376617 | Msa1100020:intron | 20.0% |
| !!! | CATAAAAAAAATGACCATTT+TGG | - | chr7_3:29376782-29376801 | None:intergenic | 20.0% |
| !! | TATAAGAATATCATAAATGG+TGG | + | chr7_3:29376914-29376933 | Msa1100020:CDS | 20.0% |
| !!! | TCATATTTTGATGAATATAG+AGG | + | chr7_3:29377349-29377368 | Msa1100020:CDS | 20.0% |
| !!! | CATATTTTGATGAATATAGA+GGG | + | chr7_3:29377350-29377369 | Msa1100020:CDS | 20.0% |
| !!! | ATATTTTGATGAATATAGAG+GGG | + | chr7_3:29377351-29377370 | Msa1100020:CDS | 20.0% |
| !! | AATATTAGAGAAATTATGTG+CGG | - | chr7_3:29377761-29377780 | None:intergenic | 20.0% |
| !!! | TTTACAGAACTTTTAGAAAA+TGG | + | chr7_3:29378011-29378030 | Msa1100020:intron | 20.0% |
| !! | CATATAAGTTTGACTATTTA+GGG | - | chr7_3:29378106-29378125 | None:intergenic | 20.0% |
| !! | AATGCATATAGATGTTATAA+AGG | - | chr7_3:29378175-29378194 | None:intergenic | 20.0% |
| !! | CTTAATACTTTGATATTTGT+AGG | + | chr7_3:29378219-29378238 | Msa1100020:intron | 20.0% |
| !! | GGTATCAATTACTAAAAAAA+CGG | + | chr7_3:29378401-29378420 | Msa1100020:intron | 20.0% |
| !! | TATCTCAAAATACAATCTAA+AGG | - | chr7_3:29378657-29378676 | None:intergenic | 20.0% |
| !!! | AGCTTGTTTTTATATTATTG+GGG | + | chr7_3:29378683-29378702 | Msa1100020:intron | 20.0% |
| !! | TTCATTAATTGTTTGATCTA+AGG | + | chr7_3:29379113-29379132 | Msa1100020:intron | 20.0% |
| !! | TCTTGAAAAATGAAAATGTA+GGG | + | chr7_3:29379807-29379826 | Msa1100020:intron | 20.0% |
| !! | TATATAGAATTGCAAGTTTA+AGG | + | chr7_3:29380379-29380398 | Msa1100020:intron | 20.0% |
| !! | CCTATTCTAAATCTTTAATT+GGG | - | chr7_3:29380840-29380859 | None:intergenic | 20.0% |
| !! | AGTTGTTAAATCATTGTTTA+CGG | + | chr7_3:29381223-29381242 | Msa1100020:intron | 20.0% |
| !!! | TGAATTTTAAACATATGAAG+AGG | - | chr7_3:29382533-29382552 | None:intergenic | 20.0% |
| !!! | AAATCATCTAAATTTTGATC+AGG | + | chr7_3:29382559-29382578 | Msa1100020:intron | 20.0% |
| !! | ACATTTATACAAGAGTTTAA+AGG | - | chr7_3:29382702-29382721 | None:intergenic | 20.0% |
| !! | CATAATATCATAACAAAAGA+TGG | - | chr7_3:29383305-29383324 | None:intergenic | 20.0% |
| !! | CATAAACAAAATGGAAAATA+TGG | - | chr7_3:29383349-29383368 | None:intergenic | 20.0% |
| !! | ATAAATCGAATAAGAAGAAA+TGG | + | chr7_3:29383437-29383456 | Msa1100020:three_prime_UTR | 20.0% |
| !! | ATGTTTATTACAAAAGATCA+TGG | - | chr7_3:29383683-29383702 | None:intergenic | 20.0% |
| !!! | TTTTCTAAGAAAACCCATTT+CGG | - | chr7_3:29374146-29374165 | None:intergenic | 25.0% |
| !! | TGTAATGGAAAATCTTTGAT+GGG | - | chr7_3:29374242-29374261 | None:intergenic | 25.0% |
| ! | ATTTGTAAAAATAGGAGTGA+TGG | + | chr7_3:29374714-29374733 | Msa1100020:intron | 25.0% |
| ! | TAAATATGTTATAGGGTATG+TGG | + | chr7_3:29375111-29375130 | Msa1100020:intron | 25.0% |
| ! | ACATATTATAAGTAGTGTCT+CGG | - | chr7_3:29375383-29375402 | None:intergenic | 25.0% |
| !! | CATTTTCATACAACCATTTT+AGG | - | chr7_3:29375410-29375429 | None:intergenic | 25.0% |
| ! | CTTTCATTATTAAGTATCAG+TGG | + | chr7_3:29376170-29376189 | Msa1100020:intron | 25.0% |
| !! | CGTGTTTTCATAAACTTTTT+AGG | + | chr7_3:29376321-29376340 | Msa1100020:intron | 25.0% |
| ! | ATCATGCAATTTAAGAAAGT+TGG | + | chr7_3:29376409-29376428 | Msa1100020:intron | 25.0% |
| ! | AACTAATTCACTCTCATAAA+GGG | - | chr7_3:29376481-29376500 | None:intergenic | 25.0% |
| ! | ATACGTTTCTTAATTGAAGT+TGG | + | chr7_3:29376820-29376839 | Msa1100020:intron | 25.0% |
| ! | AATTGCTAAGTTAGATTCAA+AGG | - | chr7_3:29377116-29377135 | None:intergenic | 25.0% |
| !! | TGATCTATCTTATTTATGAC+AGG | - | chr7_3:29377142-29377161 | None:intergenic | 25.0% |
| !!! | GATCAAACATTGATTTCAAT+TGG | - | chr7_3:29377195-29377214 | None:intergenic | 25.0% |
| ! | TAATATTCTATACCTCGTTA+AGG | + | chr7_3:29377774-29377793 | Msa1100020:intron | 25.0% |
| ! | AATATTCTATACCTCGTTAA+GGG | + | chr7_3:29377775-29377794 | Msa1100020:intron | 25.0% |
| ! | CTAAAAGTTCTGTAAAACTT+AGG | - | chr7_3:29378007-29378026 | None:intergenic | 25.0% |
| !! | TTGTTTGACAATCATTGTTT+TGG | + | chr7_3:29378064-29378083 | Msa1100020:intron | 25.0% |
| !!! | TTGTTTTGGCTTCAAAAAAT+AGG | + | chr7_3:29378078-29378097 | Msa1100020:intron | 25.0% |
| ! | CCATATAAGTTTGACTATTT+AGG | - | chr7_3:29378107-29378126 | None:intergenic | 25.0% |
| ! | CCTAAATAGTCAAACTTATA+TGG | + | chr7_3:29378104-29378123 | Msa1100020:intron | 25.0% |
| !!! | AGCAAAACATATGGTTTTTT+CGG | + | chr7_3:29378251-29378270 | Msa1100020:CDS | 25.0% |
| ! | AAAAAAACGGAATGCTAATT+TGG | + | chr7_3:29378414-29378433 | Msa1100020:intron | 25.0% |
| !! | TTTTTATATTCTATCAGGTG+TGG | + | chr7_3:29378494-29378513 | Msa1100020:intron | 25.0% |
| ! | TATGTATCATATCAGTCTAT+CGG | - | chr7_3:29378595-29378614 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATATTATTGGGG+AGG | + | chr7_3:29378686-29378705 | Msa1100020:intron | 25.0% |
| ! | ATGACAAATGATGTATTTGT+TGG | + | chr7_3:29379274-29379293 | Msa1100020:intron | 25.0% |
| ! | TGACAAATGATGTATTTGTT+GGG | + | chr7_3:29379275-29379294 | Msa1100020:intron | 25.0% |
| ! | TAATATTGGATATCATGTAG+TGG | - | chr7_3:29379650-29379669 | None:intergenic | 25.0% |
| ! | TTGAAAAGGGAGTTTAATAT+TGG | - | chr7_3:29379664-29379683 | None:intergenic | 25.0% |
| ! | AGAAAGGAAAAGGAATTAAT+TGG | - | chr7_3:29379691-29379710 | None:intergenic | 25.0% |
| ! | GTCTTGAAAAATGAAAATGT+AGG | + | chr7_3:29379806-29379825 | Msa1100020:intron | 25.0% |
| ! | CTTGAAAAATGAAAATGTAG+GGG | + | chr7_3:29379808-29379827 | Msa1100020:intron | 25.0% |
| !! | GATTTTCATATATAAGCATC+AGG | - | chr7_3:29380071-29380090 | None:intergenic | 25.0% |
| ! | TGTCAAAATAACCGTTATAA+CGG | + | chr7_3:29380243-29380262 | Msa1100020:intron | 25.0% |
| ! | GACAACACTACTTATAAAAT+TGG | + | chr7_3:29380326-29380345 | Msa1100020:intron | 25.0% |
| ! | TAAAATTGGTTGTGTAAACA+TGG | + | chr7_3:29380340-29380359 | Msa1100020:intron | 25.0% |
| ! | AAAATTGGTTGTGTAAACAT+GGG | + | chr7_3:29380341-29380360 | Msa1100020:intron | 25.0% |
| !! | TTATGTACCTCTATCATTTT+AGG | - | chr7_3:29380448-29380467 | None:intergenic | 25.0% |
| !!! | TTTTGGTTCATTCATTTTGT+TGG | - | chr7_3:29380642-29380661 | None:intergenic | 25.0% |
| ! | CAAAATGAATGAACCAAAAT+AGG | + | chr7_3:29380643-29380662 | Msa1100020:intron | 25.0% |
| !! | TCCAATATCGATTATAGATA+TGG | - | chr7_3:29380760-29380779 | None:intergenic | 25.0% |
| !! | CCCAATTAAAGATTTAGAAT+AGG | + | chr7_3:29380837-29380856 | Msa1100020:intron | 25.0% |
| ! | GCCTATTCTAAATCTTTAAT+TGG | - | chr7_3:29380841-29380860 | None:intergenic | 25.0% |
| ! | AACCAACAGAGAATTTAATA+TGG | - | chr7_3:29380871-29380890 | None:intergenic | 25.0% |
| !! | TCCAAGTCTTATAAGTTATA+AGG | + | chr7_3:29380916-29380935 | Msa1100020:intron | 25.0% |
| ! | TCCTTATAACTTATAAGACT+TGG | - | chr7_3:29380920-29380939 | None:intergenic | 25.0% |
| ! | GAATATTTCACAAGTTTACT+TGG | + | chr7_3:29381266-29381285 | Msa1100020:intron | 25.0% |
| ! | CTTATAAGAGTTAGATGATT+AGG | - | chr7_3:29381603-29381622 | None:intergenic | 25.0% |
| ! | TTGAATTTGATTGTATGAAG+TGG | + | chr7_3:29381629-29381648 | Msa1100020:intron | 25.0% |
| ! | TTAATATTTACTCCTTTGTC+CGG | - | chr7_3:29381716-29381735 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTTTATCTAC+TGG | + | chr7_3:29381867-29381886 | Msa1100020:intron | 25.0% |
| ! | ATTTAGGGAAATAAAGCTTA+TGG | - | chr7_3:29381948-29381967 | None:intergenic | 25.0% |
| ! | TAGCATAAAGCTTATCATAT+TGG | - | chr7_3:29382038-29382057 | None:intergenic | 25.0% |
| ! | GGATTCATTATAATGTAGAT+TGG | + | chr7_3:29382127-29382146 | Msa1100020:intron | 25.0% |
| ! | AAACTTGATATTCTCTTGAA+TGG | + | chr7_3:29382367-29382386 | Msa1100020:CDS | 25.0% |
| ! | TCGTCATAATATTTATCAAG+AGG | + | chr7_3:29382813-29382832 | Msa1100020:intron | 25.0% |
| ! | CGTCATAATATTTATCAAGA+GGG | + | chr7_3:29382814-29382833 | Msa1100020:intron | 25.0% |
| !!! | ATTTTGGTAGATGGATTTTA+AGG | + | chr7_3:29382912-29382931 | Msa1100020:intron | 25.0% |
| ! | CCTACATAACATAAACAAAA+TGG | - | chr7_3:29383358-29383377 | None:intergenic | 25.0% |
| !!! | CCATTTTGTTTATGTTATGT+AGG | + | chr7_3:29383355-29383374 | Msa1100020:intron | 25.0% |
| ! | TTCTTCTTATTCGATTTATG+TGG | - | chr7_3:29383436-29383455 | None:intergenic | 25.0% |
| ! | AGAGGCTAATTTCATTATTA+TGG | + | chr7_3:29383605-29383624 | Msa1100020:three_prime_UTR | 25.0% |
| !! | TCATTATTATGGCGAAATTT+TGG | + | chr7_3:29383616-29383635 | Msa1100020:three_prime_UTR | 25.0% |
| !! | CATTATTATGGCGAAATTTT+GGG | + | chr7_3:29383617-29383636 | Msa1100020:three_prime_UTR | 25.0% |
| !! | ATTATTATGGCGAAATTTTG+GGG | + | chr7_3:29383618-29383637 | Msa1100020:three_prime_UTR | 25.0% |
| ! | TTTCTAAGAAAACCCATTTC+GGG | - | chr7_3:29374145-29374164 | None:intergenic | 30.0% |
| GGGTTATTCTACTTGATAAA+GGG | - | chr7_3:29374222-29374241 | None:intergenic | 30.0% | |
| TGGGTTATTCTACTTGATAA+AGG | - | chr7_3:29374223-29374242 | None:intergenic | 30.0% | |
| ! | GTGTAATGGAAAATCTTTGA+TGG | - | chr7_3:29374243-29374262 | None:intergenic | 30.0% |
| ATCTATAATGGCTTTCTCTT+TGG | - | chr7_3:29374302-29374321 | None:intergenic | 30.0% | |
| !! | GTACTGACTCAAATCTATAA+TGG | - | chr7_3:29374314-29374333 | None:intergenic | 30.0% |
| TGCAATTTATCAAGATACTG+AGG | - | chr7_3:29374451-29374470 | None:intergenic | 30.0% | |
| TCAGTATCTTGATAAATTGC+AGG | + | chr7_3:29374450-29374469 | Msa1100020:CDS | 30.0% | |
| !!! | TTTGTTTTTGTATCTGGGTA+TGG | + | chr7_3:29374504-29374523 | Msa1100020:intron | 30.0% |
| TGTCATGTTTATGTGTATTG+TGG | + | chr7_3:29374575-29374594 | Msa1100020:intron | 30.0% | |
| ! | TATGTGTATTGTGGATTACT+AGG | + | chr7_3:29374584-29374603 | Msa1100020:intron | 30.0% |
| ! | AAAAATAGGAGTGATGGAAA+TGG | + | chr7_3:29374720-29374739 | Msa1100020:intron | 30.0% |
| TTTCCATAAACCTTTACGAT+AGG | + | chr7_3:29374973-29374992 | Msa1100020:intron | 30.0% | |
| TAACCTATCGTAAAGGTTTA+TGG | - | chr7_3:29374979-29374998 | None:intergenic | 30.0% | |
| ! | GTTTTCATAACCTATCGTAA+AGG | - | chr7_3:29374986-29375005 | None:intergenic | 30.0% |
| ATCGGTGGTAAATATGTTAT+AGG | + | chr7_3:29375103-29375122 | Msa1100020:intron | 30.0% | |
| TCGGTGGTAAATATGTTATA+GGG | + | chr7_3:29375104-29375123 | Msa1100020:intron | 30.0% | |
| !!! | TCAATTTTTTCATCTGGGTA+TGG | + | chr7_3:29375186-29375205 | Msa1100020:intron | 30.0% |
| ATGTATGTGTTTCAGTGTTT+GGG | + | chr7_3:29375259-29375278 | Msa1100020:intron | 30.0% | |
| TTGATTGGATGTTATACTCT+AGG | + | chr7_3:29375340-29375359 | Msa1100020:intron | 30.0% | |
| ATGGTTGTATGAAAATGTGT+TGG | + | chr7_3:29375413-29375432 | Msa1100020:intron | 30.0% | |
| ! | AGTTACCAGTATTTTCATCT+AGG | + | chr7_3:29375854-29375873 | Msa1100020:intron | 30.0% |
| !! | TTGGTTTTTCATGTGTGTTT+TGG | + | chr7_3:29375928-29375947 | Msa1100020:intron | 30.0% |
| ! | TGGTTTTTCATGTGTGTTTT+GGG | + | chr7_3:29375929-29375948 | Msa1100020:intron | 30.0% |
| TCAAGTGTTTGTATTTGTGT+TGG | - | chr7_3:29376035-29376054 | None:intergenic | 30.0% | |
| AAATACAAACACTTGACATG+TGG | + | chr7_3:29376039-29376058 | Msa1100020:intron | 30.0% | |
| ! | ATAACTTGTCAATATGGAAG+TGG | + | chr7_3:29376071-29376090 | Msa1100020:intron | 30.0% |
| TTGTATGAAGCTATATGTGT+CGG | + | chr7_3:29376094-29376113 | Msa1100020:intron | 30.0% | |
| ATTAAGTATCAGTGGTAGAT+AGG | + | chr7_3:29376178-29376197 | Msa1100020:intron | 30.0% | |
| GGTTACTTGAGGTTATTTAT+TGG | + | chr7_3:29376221-29376240 | Msa1100020:intron | 30.0% | |
| CAACTAATTCACTCTCATAA+AGG | - | chr7_3:29376482-29376501 | None:intergenic | 30.0% | |
| CGCACTTAGAAATTTGAAAA+AGG | + | chr7_3:29376584-29376603 | Msa1100020:intron | 30.0% | |
| GGAACTTTAAATGTTGTCTT+AGG | + | chr7_3:29376841-29376860 | Msa1100020:intron | 30.0% | |
| ACTTTAAATGTTGTCTTAGG+TGG | + | chr7_3:29376844-29376863 | Msa1100020:intron | 30.0% | |
| !! | ATTTCAATTGGCCTTTAACA+CGG | - | chr7_3:29377183-29377202 | None:intergenic | 30.0% |
| TAAAAGATAATCGCTTTACC+TGG | - | chr7_3:29377619-29377638 | None:intergenic | 30.0% | |
| ACAAACAAATTTCCAAAGAC+AGG | - | chr7_3:29377645-29377664 | None:intergenic | 30.0% | |
| ! | TTCTTTTTGTCTCAGATAGT+TGG | + | chr7_3:29377703-29377722 | Msa1100020:intron | 30.0% |
| ! | TATACGCTGAAAACAACTTT+TGG | - | chr7_3:29377876-29377895 | None:intergenic | 30.0% |
| TGTAAAACTTAGGTAAGGTT+TGG | - | chr7_3:29377997-29378016 | None:intergenic | 30.0% | |
| AGTTCTGTAAAACTTAGGTA+AGG | - | chr7_3:29378002-29378021 | None:intergenic | 30.0% | |
| AGGATAATATTCTCATACAC+AGG | - | chr7_3:29378155-29378174 | None:intergenic | 30.0% | |
| AACATCTATATGCATTTCCA+TGG | + | chr7_3:29378179-29378198 | Msa1100020:intron | 30.0% | |
| AATTAAAGAAAATTCGGCCA+TGG | - | chr7_3:29378199-29378218 | None:intergenic | 30.0% | |
| !!! | GCAAAACATATGGTTTTTTC+GGG | + | chr7_3:29378252-29378271 | Msa1100020:CDS | 30.0% |
| ! | ACATGGATGTTTTTCATCAA+AGG | + | chr7_3:29378534-29378553 | Msa1100020:CDS | 30.0% |
| AGGTAACATCAATAATGCTA+TGG | + | chr7_3:29378564-29378583 | Msa1100020:intron | 30.0% | |
| TGTTTGTGTAAACAGGAATA+TGG | + | chr7_3:29378785-29378804 | Msa1100020:intron | 30.0% | |
| ATACTCATAGATATAAGGCA+CGG | - | chr7_3:29378837-29378856 | None:intergenic | 30.0% | |
| TCGGAATACTCATAGATATA+AGG | - | chr7_3:29378842-29378861 | None:intergenic | 30.0% | |
| TATATCTATGAGTATTCCGA+TGG | + | chr7_3:29378842-29378861 | Msa1100020:CDS | 30.0% | |
| TTTGTTAATCTACCTTCCAT+CGG | - | chr7_3:29378861-29378880 | None:intergenic | 30.0% | |
| TGTGCGTTTACTAATATTCT+AGG | + | chr7_3:29378905-29378924 | Msa1100020:intron | 30.0% | |
| ACTATAGTAGCTATTACTGT+GGG | - | chr7_3:29379013-29379032 | None:intergenic | 30.0% | |
| AACTATAGTAGCTATTACTG+TGG | - | chr7_3:29379014-29379033 | None:intergenic | 30.0% | |
| ! | TTGTTTGATCTAAGGTATGT+TGG | + | chr7_3:29379121-29379140 | Msa1100020:intron | 30.0% |
| ! | TTCATTGACAGGTAAGATTT+TGG | + | chr7_3:29379196-29379215 | Msa1100020:intron | 30.0% |
| !! | ATGCTTTGAAGTAACCAATA+TGG | - | chr7_3:29379582-29379601 | None:intergenic | 30.0% |
| !!! | GCTGTTTTTGTGCTATTATT+TGG | + | chr7_3:29379621-29379640 | Msa1100020:intron | 30.0% |
| AATCTAAACCCAAAAGTCTA+CGG | + | chr7_3:29379746-29379765 | Msa1100020:intron | 30.0% | |
| !!! | TTTTTCAAGACATATGTCGA+AGG | - | chr7_3:29379797-29379816 | None:intergenic | 30.0% |
| ! | TCTATCATTTTAGGCATGTT+GGG | - | chr7_3:29380439-29380458 | None:intergenic | 30.0% |
| TTTGAATTTAGATGCGTCTA+TGG | - | chr7_3:29380487-29380506 | None:intergenic | 30.0% | |
| ACATTCAACTAAATAGAGCT+AGG | - | chr7_3:29380680-29380699 | None:intergenic | 30.0% | |
| ACTTGATCTAGATTATTGAC+TGG | - | chr7_3:29380721-29380740 | None:intergenic | 30.0% | |
| GCCATATCTATAATCGATAT+TGG | + | chr7_3:29380756-29380775 | Msa1100020:intron | 30.0% | |
| TGCCATATTAAATTCTCTGT+TGG | + | chr7_3:29380866-29380885 | Msa1100020:intron | 30.0% | |
| ATAAGTTATAAGGACTCCTT+TGG | + | chr7_3:29380926-29380945 | Msa1100020:intron | 30.0% | |
| !! | CAAATTTTGGTGAGATAGTT+TGG | + | chr7_3:29381165-29381184 | Msa1100020:intron | 30.0% |
| TCAATAACAATTTCCCTCAA+AGG | - | chr7_3:29381394-29381413 | None:intergenic | 30.0% | |
| ! | GAATTGAAGAGTATAACATC+AGG | + | chr7_3:29381424-29381443 | Msa1100020:CDS | 30.0% |
| CTATGCATCATTTGATTATG+AGG | + | chr7_3:29381447-29381466 | Msa1100020:CDS | 30.0% | |
| ATTGGATGTTAGTGTAAAAC+TGG | - | chr7_3:29381563-29381582 | None:intergenic | 30.0% | |
| ! | AGTTTTACACTAACATCCAA+TGG | + | chr7_3:29381562-29381581 | Msa1100020:intron | 30.0% |
| ! | GTTTTACACTAACATCCAAT+GGG | + | chr7_3:29381563-29381582 | Msa1100020:intron | 30.0% |
| !! | TGAATTCTTGTTGTTTGTTG+AGG | + | chr7_3:29381660-29381679 | Msa1100020:intron | 30.0% |
| !! | GAATTCTTGTTGTTTGTTGA+GGG | + | chr7_3:29381661-29381680 | Msa1100020:intron | 30.0% |
| TAATATTTACTCCTTTGTCC+GGG | - | chr7_3:29381715-29381734 | None:intergenic | 30.0% | |
| TGAGTTTATCTACTGGTATA+TGG | + | chr7_3:29381874-29381893 | Msa1100020:intron | 30.0% | |
| TAAGCTATCATGGAGATTTA+GGG | - | chr7_3:29381963-29381982 | None:intergenic | 30.0% | |
| ATAAGCTATCATGGAGATTT+AGG | - | chr7_3:29381964-29381983 | None:intergenic | 30.0% | |
| ! | GAGTGTTTTATAAGCTATCA+TGG | - | chr7_3:29381973-29381992 | None:intergenic | 30.0% |
| AGCAAACCACACTATATATT+TGG | + | chr7_3:29382274-29382293 | Msa1100020:intron | 30.0% | |
| GTGAATCCAAATATATAGTG+TGG | - | chr7_3:29382283-29382302 | None:intergenic | 30.0% | |
| CAACCTTACAATGCATTTAA+TGG | + | chr7_3:29382310-29382329 | Msa1100020:intron | 30.0% | |
| !! | TGATTTCGAGTTATGAACAA+TGG | - | chr7_3:29382416-29382435 | None:intergenic | 30.0% |
| AATTGAAGAAAGTCATAGAC+AGG | + | chr7_3:29382464-29382483 | Msa1100020:CDS | 30.0% | |
| GCTAATATGTCTGTTTGTAA+TGG | + | chr7_3:29382665-29382684 | Msa1100020:intron | 30.0% | |
| !! | TAGTCATTTTGCTTTCCAAT+AGG | + | chr7_3:29382889-29382908 | Msa1100020:intron | 30.0% |
| ! | TTTGCTTTCCAATAGGATTT+TGG | + | chr7_3:29382896-29382915 | Msa1100020:intron | 30.0% |
| ! | TAAAGTTGCGCATTAGATTT+TGG | + | chr7_3:29383213-29383232 | Msa1100020:three_prime_UTR | 30.0% |
| !! | AATTTACTTTGCTGCTTTCA+TGG | + | chr7_3:29383467-29383486 | Msa1100020:three_prime_UTR | 30.0% |
| AACCTCAAAAAACCCGAAAT+GGG | + | chr7_3:29374130-29374149 | Msa1100020:exon | 35.0% | |
| !!! | CTTTCTCTTTGGTGTTGTTT+TGG | - | chr7_3:29374291-29374310 | None:intergenic | 35.0% |
| ATCATTGCACATGTTGATCA+TGG | + | chr7_3:29374361-29374380 | Msa1100020:CDS | 35.0% | |
| GAAAATCTACTCTTGCTGAT+CGG | + | chr7_3:29374383-29374402 | Msa1100020:CDS | 35.0% | |
| TGATCGGTTATTGGAACTTA+CGG | + | chr7_3:29374399-29374418 | Msa1100020:CDS | 35.0% | |
| GCACTATTAAGAAAGGACTT+GGG | + | chr7_3:29374422-29374441 | Msa1100020:CDS | 35.0% | |
| ! | ATTGGTGGTAGATAGGTTAT+AGG | + | chr7_3:29374823-29374842 | Msa1100020:intron | 35.0% |
| ! | TTGGTGGTAGATAGGTTATA+GGG | + | chr7_3:29374824-29374843 | Msa1100020:intron | 35.0% |
| ! | GATAGGTTATAGGGTTTGTT+TGG | + | chr7_3:29374833-29374852 | Msa1100020:intron | 35.0% |
| ! | GTTATAGGGTTTGTTTGGAT+TGG | + | chr7_3:29374838-29374857 | Msa1100020:intron | 35.0% |
| GGTTATTTGAGCTTAGATAC+TGG | + | chr7_3:29374859-29374878 | Msa1100020:intron | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | + | chr7_3:29374895-29374914 | Msa1100020:intron | 35.0% | |
| CTGAAAACAACTCGTACTTA+TGG | - | chr7_3:29374949-29374968 | None:intergenic | 35.0% | |
| ACATTGACATATACACCAGA+CGG | - | chr7_3:29375023-29375042 | None:intergenic | 35.0% | |
| ACACATGTCAAAGTACAACA+CGG | - | chr7_3:29375053-29375072 | None:intergenic | 35.0% | |
| ACGCTTTCGATATGAAGTAT+CGG | + | chr7_3:29375085-29375104 | Msa1100020:intron | 35.0% | |
| CATGTATGTGTTTCAGTGTT+TGG | + | chr7_3:29375258-29375277 | Msa1100020:intron | 35.0% | |
| ! | TTTCAGTGTTTGGGTTAACT+AGG | + | chr7_3:29375268-29375287 | Msa1100020:intron | 35.0% |
| CAGACAAGTCTTCAATTTGA+AGG | + | chr7_3:29375464-29375483 | Msa1100020:intron | 35.0% | |
| ACAATATAACCTATCCAGCA+TGG | - | chr7_3:29375492-29375511 | None:intergenic | 35.0% | |
| !! | CTGAATTATTGGTGCTAGAT+AGG | + | chr7_3:29375649-29375668 | Msa1100020:intron | 35.0% |
| TTTCAAACACGAGTTCAGTA+TGG | + | chr7_3:29375710-29375729 | Msa1100020:intron | 35.0% | |
| !! | ATGGAGTATTGGTGTTAGAT+AGG | + | chr7_3:29375729-29375748 | Msa1100020:intron | 35.0% |
| GCAAACCTAGATGAAAATAC+TGG | - | chr7_3:29375862-29375881 | None:intergenic | 35.0% | |
| !!! | ATGTGTGTTTTGGGTTAACT+AGG | + | chr7_3:29375938-29375957 | Msa1100020:intron | 35.0% |
| ! | TAATGAAAGTGTGTAAGCGT+CGG | - | chr7_3:29376159-29376178 | None:intergenic | 35.0% |
| ATCAGTGGTAGATAGGTTAT+AGG | + | chr7_3:29376185-29376204 | Msa1100020:intron | 35.0% | |
| TCAGTGGTAGATAGGTTATA+GGG | + | chr7_3:29376186-29376205 | Msa1100020:intron | 35.0% | |
| ! | GATAGGTTATAGGGTTTGTT+TGG | + | chr7_3:29374833-29374852 | Msa1100020:intron | 35.0% |
| ! | GTTATAGGGTTTGTTTGGAT+TGG | + | chr7_3:29374838-29374857 | Msa1100020:intron | 35.0% |
| !! | TTGTTTGGATTGGTTACTTG+AGG | + | chr7_3:29376210-29376229 | Msa1100020:intron | 35.0% |
| CTCAATGGGTCCTATATTTA+GGG | - | chr7_3:29376386-29376405 | None:intergenic | 35.0% | |
| AATTGCATGATGTCCTCAAT+GGG | - | chr7_3:29376400-29376419 | None:intergenic | 35.0% | |
| AAATTGCATGATGTCCTCAA+TGG | - | chr7_3:29376401-29376420 | None:intergenic | 35.0% | |
| GGACAAAGAAAAAACTCAAG+AGG | + | chr7_3:29376619-29376638 | Msa1100020:intron | 35.0% | |
| TTGAATCTTATTGACACACC+TGG | + | chr7_3:29376974-29376993 | Msa1100020:CDS | 35.0% | |
| TGAATCTTATTGACACACCT+GGG | + | chr7_3:29376975-29376994 | Msa1100020:CDS | 35.0% | |
| CTAAGTTAGATTCAAAGGCA+AGG | - | chr7_3:29377111-29377130 | None:intergenic | 35.0% | |
| TCATACGAAGCTATGGATAT+AGG | + | chr7_3:29377448-29377467 | Msa1100020:CDS | 35.0% | |
| CATACGAAGCTATGGATATA+GGG | + | chr7_3:29377449-29377468 | Msa1100020:CDS | 35.0% | |
| !! | CAAGTTGGTTACGTTATAAC+TGG | + | chr7_3:29377517-29377536 | Msa1100020:CDS | 35.0% |
| ! | CATCAACAGTGCTTTTAGTA+TGG | - | chr7_3:29377585-29377604 | None:intergenic | 35.0% |
| !! | TACTAAAAGCACTGTTGATG+TGG | + | chr7_3:29377585-29377604 | Msa1100020:CDS | 35.0% |
| ! | TATCTTTTACCTCCTGTCTT+TGG | + | chr7_3:29377630-29377649 | Msa1100020:intron | 35.0% |
| AACAAATTTCCAAAGACAGG+AGG | - | chr7_3:29377642-29377661 | None:intergenic | 35.0% | |
| ! | GAAAATGGACTTGCAGAAAA+CGG | + | chr7_3:29378026-29378045 | Msa1100020:intron | 35.0% |
| CTTCAAAGCAGCAAAACATA+TGG | + | chr7_3:29378242-29378261 | Msa1100020:CDS | 35.0% | |
| ATGTAAGCTTCTCTATTGCA+TGG | - | chr7_3:29378317-29378336 | None:intergenic | 35.0% | |
| ! | TCTATCAGGTGTGGATTTTT+AGG | + | chr7_3:29378503-29378522 | Msa1100020:intron | 35.0% |
| ! | TTTTCATCAAAGGCTTGAAC+AGG | + | chr7_3:29378544-29378563 | Msa1100020:CDS | 35.0% |
| !! | GTCGAGTAATTGACTTGAAA+TGG | + | chr7_3:29378708-29378727 | Msa1100020:intron | 35.0% |
| TAGAGCATGTTTGTGTAAAC+AGG | + | chr7_3:29378778-29378797 | Msa1100020:intron | 35.0% | |
| GTTTGCAGAATCACAAGTTT+AGG | + | chr7_3:29379412-29379431 | Msa1100020:intron | 35.0% | |
| ! | AATCACAAGTTTAGGACTCT+AGG | + | chr7_3:29379420-29379439 | Msa1100020:intron | 35.0% |
| ! | TTTTCAGACCCCTCAAAAAA+GGG | - | chr7_3:29379519-29379538 | None:intergenic | 35.0% |
| !! | TTTTTCAGACCCCTCAAAAA+AGG | - | chr7_3:29379520-29379539 | None:intergenic | 35.0% |
| TGAAGTAACCAATATGGCAT+GGG | - | chr7_3:29379576-29379595 | None:intergenic | 35.0% | |
| TTGAAGTAACCAATATGGCA+TGG | - | chr7_3:29379577-29379596 | None:intergenic | 35.0% | |
| AATAGCACAAAAACAGCAAG+TGG | - | chr7_3:29379618-29379637 | None:intergenic | 35.0% | |
| ! | CCTTTTCCTTTCTTTCCAAA+CGG | + | chr7_3:29379698-29379717 | Msa1100020:intron | 35.0% |
| AGATTGCGAAGGAGAAAAAA+GGG | - | chr7_3:29379731-29379750 | None:intergenic | 35.0% | |
| TAGATTGCGAAGGAGAAAAA+AGG | - | chr7_3:29379732-29379751 | None:intergenic | 35.0% | |
| ! | GATGAAAACCGTAGACTTTT+GGG | - | chr7_3:29379757-29379776 | None:intergenic | 35.0% |
| ACATATGTCGAAGGAAAAAG+GGG | - | chr7_3:29379788-29379807 | None:intergenic | 35.0% | |
| GACATATGTCGAAGGAAAAA+GGG | - | chr7_3:29379789-29379808 | None:intergenic | 35.0% | |
| AGACATATGTCGAAGGAAAA+AGG | - | chr7_3:29379790-29379809 | None:intergenic | 35.0% | |
| GAAAATGTAGGGGATCTTAT+AGG | + | chr7_3:29379818-29379837 | Msa1100020:intron | 35.0% | |
| ATGCTATAGCACCGTTATAA+CGG | - | chr7_3:29380257-29380276 | None:intergenic | 35.0% | |
| ATTGCAAGTTTAAGGACGAT+TGG | + | chr7_3:29380387-29380406 | Msa1100020:intron | 35.0% | |
| TTGGCAAGTGTATCACATAA+TGG | + | chr7_3:29380406-29380425 | Msa1100020:intron | 35.0% | |
| ! | CTCTATCATTTTAGGCATGT+TGG | - | chr7_3:29380440-29380459 | None:intergenic | 35.0% |
| CAACATGCCTAAAATGATAG+AGG | + | chr7_3:29380438-29380457 | Msa1100020:intron | 35.0% | |
| ! | GATAGAGGTACATAAGACAA+TGG | + | chr7_3:29380453-29380472 | Msa1100020:intron | 35.0% |
| AAACATGAACCCATCTTGAA+AGG | + | chr7_3:29380504-29380523 | Msa1100020:intron | 35.0% | |
| TGTTCAACTCCTTTCAAGAT+GGG | - | chr7_3:29380516-29380535 | None:intergenic | 35.0% | |
| TTGTTCAACTCCTTTCAAGA+TGG | - | chr7_3:29380517-29380536 | None:intergenic | 35.0% | |
| TTCATCTATGTTGAGAGTTG+AGG | - | chr7_3:29380565-29380584 | None:intergenic | 35.0% | |
| !! | TGGGTTTTGTACATGTTTTC+TGG | - | chr7_3:29380596-29380615 | None:intergenic | 35.0% |
| ! | GGTTTCAACTCATCCTATTT+TGG | - | chr7_3:29380659-29380678 | None:intergenic | 35.0% |
| !! | ATCAAGTGTTGAGACTACTT+TGG | + | chr7_3:29380734-29380753 | Msa1100020:intron | 35.0% |
| ! | GAAGTGTCAACAAATATGAG+CGG | + | chr7_3:29380814-29380833 | Msa1100020:intron | 35.0% |
| AACATTGTTAAGATCCCACA+AGG | - | chr7_3:29380974-29380993 | None:intergenic | 35.0% | |
| GATATAGCAAACTGCATTGA+AGG | - | chr7_3:29381021-29381040 | None:intergenic | 35.0% | |
| ! | ATCTCACCAAAATTTGCTCT+GGG | - | chr7_3:29381161-29381180 | None:intergenic | 35.0% |
| ! | TATCTCACCAAAATTTGCTC+TGG | - | chr7_3:29381162-29381181 | None:intergenic | 35.0% |
| TCAATGCTGTCTAATTTGAG+AGG | - | chr7_3:29381292-29381311 | None:intergenic | 35.0% | |
| !!! | TTTTTTTCTCCTGCAGTCAA+CGG | + | chr7_3:29381347-29381366 | Msa1100020:intron | 35.0% |
| TATAAGGAGGCAAAAGGATA+GGG | - | chr7_3:29381488-29381507 | None:intergenic | 35.0% | |
| TTATAAGGAGGCAAAAGGAT+AGG | - | chr7_3:29381489-29381508 | None:intergenic | 35.0% | |
| CAAAACAATAATCATGCAGG+CGG | - | chr7_3:29381512-29381531 | None:intergenic | 35.0% | |
| GTGCAAAACAATAATCATGC+AGG | - | chr7_3:29381515-29381534 | None:intergenic | 35.0% | |
| !! | TTGTTGTTTGTTGAGGGATA+AGG | + | chr7_3:29381667-29381686 | Msa1100020:intron | 35.0% |
| !!! | TGGTATATGGTTTTGTGAGA+CGG | + | chr7_3:29381887-29381906 | Msa1100020:intron | 35.0% |
| GTTATTTACTCTGTTGTGTG+TGG | + | chr7_3:29382089-29382108 | Msa1100020:intron | 35.0% | |
| GTGTGGTTTGAATCAATGAA+CGG | + | chr7_3:29382106-29382125 | Msa1100020:intron | 35.0% | |
| TTGGCTATAGTTTATCTACC+AGG | - | chr7_3:29382171-29382190 | None:intergenic | 35.0% | |
| CAGCCATTAAATGCATTGTA+AGG | - | chr7_3:29382316-29382335 | None:intergenic | 35.0% | |
| AACTCGAAATCATATCGTGT+TGG | + | chr7_3:29382424-29382443 | Msa1100020:CDS | 35.0% | |
| ACTCGAAATCATATCGTGTT+GGG | + | chr7_3:29382425-29382444 | Msa1100020:CDS | 35.0% | |
| ! | AATGATTTTTGACCCAATGG+CGG | - | chr7_3:29382610-29382629 | None:intergenic | 35.0% |
| ! | TGCAATGATTTTTGACCCAA+TGG | - | chr7_3:29382613-29382632 | None:intergenic | 35.0% |
| TTGGGTCAAAAATCATTGCA+AGG | + | chr7_3:29382613-29382632 | Msa1100020:CDS | 35.0% | |
| TGGGTCAAAAATCATTGCAA+GGG | + | chr7_3:29382614-29382633 | Msa1100020:CDS | 35.0% | |
| GTAAATTCAGGAGAGAGAAT+TGG | + | chr7_3:29382736-29382755 | Msa1100020:intron | 35.0% | |
| !! | TCCAATAGGATTTTGGTAGA+TGG | + | chr7_3:29382903-29382922 | Msa1100020:intron | 35.0% |
| TCCATCTACCAAAATCCTAT+TGG | - | chr7_3:29382907-29382926 | None:intergenic | 35.0% | |
| AATGTTCTTGCCAAGTGTTA+TGG | + | chr7_3:29383054-29383073 | Msa1100020:CDS | 35.0% | |
| AATATCACCACCATAACACT+TGG | - | chr7_3:29383067-29383086 | None:intergenic | 35.0% | |
| ! | TACACGAAAGAAGAAGCTTT+TGG | + | chr7_3:29383086-29383105 | Msa1100020:CDS | 35.0% |
| !! | TTTTGGAGAAGCAAAAGGAA+GGG | + | chr7_3:29383103-29383122 | Msa1100020:CDS | 35.0% |
| AAAAAGCGAATGAAACGTGT+TGG | + | chr7_3:29383126-29383145 | Msa1100020:CDS | 35.0% | |
| ACGAAACCTTCAATAGTTCA+TGG | - | chr7_3:29383179-29383198 | None:intergenic | 35.0% | |
| GTTCTCATAAAACTCAGTTG+TGG | + | chr7_3:29383392-29383411 | Msa1100020:three_prime_UTR | 35.0% | |
| !!! | TCGGGTTTTTTGAGGTTGTT+TGG | - | chr7_3:29374127-29374146 | None:intergenic | 40.0% |
| CAACCTCAAAAAACCCGAAA+TGG | + | chr7_3:29374129-29374148 | Msa1100020:exon | 40.0% | |
| !!! | AACCCATTTCGGGTTTTTTG+AGG | - | chr7_3:29374135-29374154 | None:intergenic | 40.0% |
| ! | ACAGAAAAGTGCACGTGTAA+TGG | - | chr7_3:29374257-29374276 | None:intergenic | 40.0% |
| ! | AATTTCTCACAAGCTCTGGT+GGG | - | chr7_3:29374336-29374355 | None:intergenic | 40.0% |
| ! | AAATTTCTCACAAGCTCTGG+TGG | - | chr7_3:29374337-29374356 | None:intergenic | 40.0% |
| GAGAAATTTCTCACAAGCTC+TGG | - | chr7_3:29374340-29374359 | None:intergenic | 40.0% | |
| TACTCTTGCTGATCGGTTAT+TGG | + | chr7_3:29374390-29374409 | Msa1100020:CDS | 40.0% | |
| GATCGGTTATTGGAACTTAC+GGG | + | chr7_3:29374400-29374419 | Msa1100020:CDS | 40.0% | |
| CTTACGGGCACTATTAAGAA+AGG | + | chr7_3:29374415-29374434 | Msa1100020:CDS | 40.0% | |
| GGCACTATTAAGAAAGGACT+TGG | + | chr7_3:29374421-29374440 | Msa1100020:CDS | 40.0% | |
| TTACTAGGATGTGTGTGTTG+TGG | + | chr7_3:29374599-29374618 | Msa1100020:intron | 40.0% | |
| TACGAAGTTTGACACGTAGA+CGG | + | chr7_3:29374683-29374702 | Msa1100020:intron | 40.0% | |
| ATGCTTTCAATCCGAAGCAT+TGG | + | chr7_3:29374805-29374824 | Msa1100020:intron | 40.0% | |
| !! | CTTTCGATATGAAGTATCGG+TGG | + | chr7_3:29375088-29375107 | Msa1100020:intron | 40.0% |
| ATGTTATAGGGTATGTGGAG+TGG | + | chr7_3:29375116-29375135 | Msa1100020:intron | 40.0% | |
| TGTTATAGGGTATGTGGAGT+GGG | + | chr7_3:29375117-29375136 | Msa1100020:intron | 40.0% | |
| ! | TGTTTGGGTTAACTAGGATG+TGG | + | chr7_3:29375274-29375293 | Msa1100020:intron | 40.0% |
| TAGGATGTGGAATGAGACAA+TGG | + | chr7_3:29375287-29375306 | Msa1100020:intron | 40.0% | |
| AGGATGTGGAATGAGACAAT+GGG | + | chr7_3:29375288-29375307 | Msa1100020:intron | 40.0% | |
| ! | GTATGAAAATGTGTTGGCGT+CGG | + | chr7_3:29375419-29375438 | Msa1100020:intron | 40.0% |
| TCAATTTGAAGGATCCATGC+TGG | + | chr7_3:29375475-29375494 | Msa1100020:intron | 40.0% | |
| ACGAGTTCAGTATGGAGTAT+TGG | + | chr7_3:29375718-29375737 | Msa1100020:intron | 40.0% | |
| TCTTGACTTCAAGTGTGTCA+TGG | + | chr7_3:29375767-29375786 | Msa1100020:intron | 40.0% | |
| !!! | GTTTTGGGTTAACTAGGATG+TGG | + | chr7_3:29375944-29375963 | Msa1100020:intron | 40.0% |
| GGTTAACTAGGATGTGGAAT+GGG | + | chr7_3:29375280-29375299 | Msa1100020:intron | 40.0% | |
| GTTAACTAGGATGTGGAATG+GGG | + | chr7_3:29375281-29375300 | Msa1100020:intron | 40.0% | |
| TAAACACTCGTGAGACTGTT+TGG | + | chr7_3:29376246-29376265 | Msa1100020:intron | 40.0% | |
| ATGGGTCCTATATTTAGGGA+CGG | - | chr7_3:29376382-29376401 | None:intergenic | 40.0% | |
| CCTCAATGGGTCCTATATTT+AGG | - | chr7_3:29376387-29376406 | None:intergenic | 40.0% | |
| CCTAAATATAGGACCCATTG+AGG | + | chr7_3:29376384-29376403 | Msa1100020:intron | 40.0% | |
| AGAGGTCCTAAATTTACGCA+CGG | + | chr7_3:29376637-29376656 | Msa1100020:intron | 40.0% | |
| CTATCTCCGTGCGTAAATTT+AGG | - | chr7_3:29376646-29376665 | None:intergenic | 40.0% | |
| ! | AATGGTGGTGATTCTAACGA+TGG | + | chr7_3:29376929-29376948 | Msa1100020:CDS | 40.0% |
| TGGTGATTCTAACGATGGAA+AGG | + | chr7_3:29376934-29376953 | Msa1100020:CDS | 40.0% | |
| TAACTGAAATCTACATGCCC+AGG | - | chr7_3:29376995-29377014 | None:intergenic | 40.0% | |
| !! | ATTTCAGTTACGAAGTGTCG+AGG | + | chr7_3:29377005-29377024 | Msa1100020:CDS | 40.0% |
| ATGTTAGCAATGCATCACTC+GGG | - | chr7_3:29377222-29377241 | None:intergenic | 40.0% | |
| GATGTTAGCAATGCATCACT+CGG | - | chr7_3:29377223-29377242 | None:intergenic | 40.0% | |
| GAGTGATGCATTGCTAACAT+CGG | + | chr7_3:29377222-29377241 | Msa1100020:CDS | 40.0% | |
| ! | TTGCTAACATCGGCTAAAAC+TGG | + | chr7_3:29377232-29377251 | Msa1100020:CDS | 40.0% |
| ! | TGCTAACATCGGCTAAAACT+GGG | + | chr7_3:29377233-29377252 | Msa1100020:CDS | 40.0% |
| AAAGAAGATTCACTCTTCCC+AGG | - | chr7_3:29377310-29377329 | None:intergenic | 40.0% | |
| CAAGGGGGATAAGATTTCTT+CGG | + | chr7_3:29377411-29377430 | Msa1100020:CDS | 40.0% | |
| GGGTAAATCATACGAAGCTA+TGG | + | chr7_3:29377441-29377460 | Msa1100020:CDS | 40.0% | |
| GTCTTGTATACTGGACAAGT+TGG | + | chr7_3:29377502-29377521 | Msa1100020:CDS | 40.0% | |
| GTTACGTTATAACTGGCATG+CGG | + | chr7_3:29377524-29377543 | Msa1100020:CDS | 40.0% | |
| ATAATCGCTTTACCTGGAAG+AGG | - | chr7_3:29377613-29377632 | None:intergenic | 40.0% | |
| TAGTAAAAAGCCTACGTGCA+TGG | - | chr7_3:29377738-29377757 | None:intergenic | 40.0% | |
| TCAAGTAAGCCCACACAAAT+AGG | - | chr7_3:29377801-29377820 | None:intergenic | 40.0% | |
| TCAAAATCAGATCCATCAGC+TGG | - | chr7_3:29378285-29378304 | None:intergenic | 40.0% | |
| AAAGAAACTAGCACTGCTCT+AGG | + | chr7_3:29378363-29378382 | Msa1100020:CDS | 40.0% | |
| !! | ATTTTTAGGCCTTCTGCACA+TGG | + | chr7_3:29378517-29378536 | Msa1100020:CDS | 40.0% |
| GAAAAACATCCATGTGCAGA+AGG | - | chr7_3:29378529-29378548 | None:intergenic | 40.0% | |
| TCATAGATATAAGGCACGGT+AGG | - | chr7_3:29378833-29378852 | None:intergenic | 40.0% | |
| TCTATGAGTATTCCGATGGA+AGG | + | chr7_3:29378846-29378865 | Msa1100020:CDS | 40.0% | |
| GTCTGTGAAATTATCTCGTG+TGG | + | chr7_3:29379370-29379389 | Msa1100020:intron | 40.0% | |
| CCGTTTGGAAAGAAAGGAAA+AGG | - | chr7_3:29379701-29379720 | None:intergenic | 40.0% | |
| TCGAAACCGTTTGGAAAGAA+AGG | - | chr7_3:29379707-29379726 | None:intergenic | 40.0% | |
| AAAAAGGGTTCGAAACCGTT+TGG | - | chr7_3:29379716-29379735 | None:intergenic | 40.0% | |
| !!! | CTTTTGGGTTTAGATTGCGA+AGG | - | chr7_3:29379742-29379761 | None:intergenic | 40.0% |
| ! | GGATGAAAACCGTAGACTTT+TGG | - | chr7_3:29379758-29379777 | None:intergenic | 40.0% |
| GAAGGAAAAAGGGGAAGAAA+TGG | - | chr7_3:29379779-29379798 | None:intergenic | 40.0% | |
| TGTATGACGAGATCCAACTT+CGG | + | chr7_3:29379965-29379984 | Msa1100020:intron | 40.0% | |
| !! | TAACGGTGCTATAGCATTGT+TGG | + | chr7_3:29380260-29380279 | Msa1100020:intron | 40.0% |
| GTGTTGTCAATTGTAGATCG+TGG | - | chr7_3:29380314-29380333 | None:intergenic | 40.0% | |
| AGGTACATAAGACAATGGAG+CGG | + | chr7_3:29380458-29380477 | Msa1100020:intron | 40.0% | |
| TTGCGTTCATTGCAAACGAT+GGG | - | chr7_3:29380615-29380634 | None:intergenic | 40.0% | |
| AGTTGAATGTAGCTCCAACA+AGG | + | chr7_3:29380690-29380709 | Msa1100020:intron | 40.0% | |
| ATTGACTGGATTCTCCTTGT+TGG | - | chr7_3:29380707-29380726 | None:intergenic | 40.0% | |
| ! | TGTTGGTTGAATCTAGCTGA+AGG | + | chr7_3:29380883-29380902 | Msa1100020:intron | 40.0% |
| GTTGGTTGAATCTAGCTGAA+GGG | + | chr7_3:29380884-29380903 | Msa1100020:intron | 40.0% | |
| TTGAGTAGAGATATGGCCAA+AGG | - | chr7_3:29380945-29380964 | None:intergenic | 40.0% | |
| GCCATATCTCTACTCAATTG+TGG | + | chr7_3:29380948-29380967 | Msa1100020:intron | 40.0% | |
| GCCACAATTGAGTAGAGATA+TGG | - | chr7_3:29380952-29380971 | None:intergenic | 40.0% | |
| AGAATTGAACCTGAGACCTT+AGG | - | chr7_3:29381137-29381156 | None:intergenic | 40.0% | |
| ! | ATTCTCCCCAGAGCAAATTT+TGG | + | chr7_3:29381152-29381171 | Msa1100020:intron | 40.0% |
| ! | TCTCACCAAAATTTGCTCTG+GGG | - | chr7_3:29381160-29381179 | None:intergenic | 40.0% |
| !!! | TTTTTTCTCCTGCAGTCAAC+GGG | + | chr7_3:29381348-29381367 | Msa1100020:intron | 40.0% |
| !! | TGAAGTATCGTCTTCCTTTG+AGG | + | chr7_3:29381377-29381396 | Msa1100020:CDS | 40.0% |
| !! | GAAGTATCGTCTTCCTTTGA+GGG | + | chr7_3:29381378-29381397 | Msa1100020:CDS | 40.0% |
| ATAAGGAGGCAAAAGGATAG+GGG | - | chr7_3:29381487-29381506 | None:intergenic | 40.0% | |
| TAATCATGCAGGCGGTTATA+AGG | - | chr7_3:29381504-29381523 | None:intergenic | 40.0% | |
| TTTGTTGAGGGATAAGGAGT+TGG | + | chr7_3:29381673-29381692 | Msa1100020:intron | 40.0% | |
| !!! | TATGGTTTTGTGAGACGGTT+TGG | + | chr7_3:29381892-29381911 | Msa1100020:intron | 40.0% |
| !!! | ATGGTTTTGTGAGACGGTTT+GGG | + | chr7_3:29381893-29381912 | Msa1100020:intron | 40.0% |
| TATAGAGAAGTTGTGAGACC+TGG | + | chr7_3:29382150-29382169 | Msa1100020:intron | 40.0% | |
| CAGTTATCAACCATCTGATC+TGG | + | chr7_3:29382342-29382361 | Msa1100020:intron | 40.0% | |
| TCAAGTTTCACCAGATCAGA+TGG | - | chr7_3:29382355-29382374 | None:intergenic | 40.0% | |
| ATAATCATACAAGCCGCCAT+TGG | + | chr7_3:29382594-29382613 | Msa1100020:CDS | 40.0% | |
| TAATCATACAAGCCGCCATT+GGG | + | chr7_3:29382595-29382614 | Msa1100020:CDS | 40.0% | |
| TGAATTTACGTCACGAAGGT+AGG | - | chr7_3:29382725-29382744 | None:intergenic | 40.0% | |
| TACCTTCGTGACGTAAATTC+AGG | + | chr7_3:29382724-29382743 | Msa1100020:intron | 40.0% | |
| AAGTGCATTGCATTTGTCGA+GGG | - | chr7_3:29382938-29382957 | None:intergenic | 40.0% | |
| !! | GAAGCTTTTGGAGAAGCAAA+AGG | + | chr7_3:29383098-29383117 | Msa1100020:CDS | 40.0% |
| !! | CTTTTGGAGAAGCAAAAGGA+AGG | + | chr7_3:29383102-29383121 | Msa1100020:CDS | 40.0% |
| AGCGTTCCATGAACTATTGA+AGG | + | chr7_3:29383170-29383189 | Msa1100020:CDS | 40.0% | |
| CTCAGTTGTGGAATTAGCTA+TGG | + | chr7_3:29383404-29383423 | Msa1100020:three_prime_UTR | 40.0% | |
| GATTGAAACTGAGCTTCAAG+AGG | + | chr7_3:29383587-29383606 | Msa1100020:three_prime_UTR | 40.0% | |
| !!! | TTATGGCGAAATTTTGGGGT+TGG | + | chr7_3:29383622-29383641 | Msa1100020:three_prime_UTR | 40.0% |
| !! | CTTTCAATCCGAAGCATTGG+TGG | + | chr7_3:29374808-29374827 | Msa1100020:intron | 45.0% |
| CCTATCTACCACCAATGCTT+CGG | - | chr7_3:29374819-29374838 | None:intergenic | 45.0% | |
| CAACTTATTCTACCTCCGTC+TGG | + | chr7_3:29375005-29375024 | Msa1100020:intron | 45.0% | |
| TTGACATATACACCAGACGG+AGG | - | chr7_3:29375020-29375039 | None:intergenic | 45.0% | |
| GGAGTGGGATGATAAATTGC+AGG | + | chr7_3:29375132-29375151 | Msa1100020:intron | 45.0% | |
| TTGAAGGATCCATGCTGGAT+AGG | + | chr7_3:29375480-29375499 | Msa1100020:intron | 45.0% | |
| GGGTTAACTAGGATGTGGAA+TGG | + | chr7_3:29375279-29375298 | Msa1100020:intron | 45.0% | |
| TCGGTTTCAATGTGTCGTGT+CGG | + | chr7_3:29376113-29376132 | Msa1100020:intron | 45.0% | |
| CTACCTCCGTCCCTAAATAT+AGG | + | chr7_3:29376373-29376392 | Msa1100020:intron | 45.0% | |
| TGTCTTAGGTGGAGAGAGAA+AGG | + | chr7_3:29376855-29376874 | Msa1100020:intron | 45.0% | |
| GTCTTAGGTGGAGAGAGAAA+GGG | + | chr7_3:29376856-29376875 | Msa1100020:intron | 45.0% | |
| TCTTAGGTGGAGAGAGAAAG+GGG | + | chr7_3:29376857-29376876 | Msa1100020:intron | 45.0% | |
| TTGGTTGTTGATGCTGCTCA+AGG | + | chr7_3:29377055-29377074 | Msa1100020:CDS | 45.0% | |
| !! | AATTGGCCTTTAACACGGTC+GGG | - | chr7_3:29377178-29377197 | None:intergenic | 45.0% |
| !! | CAATTGGCCTTTAACACGGT+CGG | - | chr7_3:29377179-29377198 | None:intergenic | 45.0% |
| ! | GCTAACATCGGCTAAAACTG+GGG | + | chr7_3:29377234-29377253 | Msa1100020:CDS | 45.0% |
| GGTATACGCTCTATAACTGC+TGG | - | chr7_3:29377280-29377299 | None:intergenic | 45.0% | |
| AGCTTCGTATGATTTACCCG+TGG | - | chr7_3:29377440-29377459 | None:intergenic | 45.0% | |
| CCAGTATACAAGACTCCAGT+AGG | - | chr7_3:29377496-29377515 | None:intergenic | 45.0% | |
| ! | CCTACTGGAGTCTTGTATAC+TGG | + | chr7_3:29377493-29377512 | Msa1100020:CDS | 45.0% |
| ACACAAATAGGCCCTTAACG+AGG | - | chr7_3:29377789-29377808 | None:intergenic | 45.0% | |
| TCGTTAAGGGCCTATTTGTG+TGG | + | chr7_3:29377788-29377807 | Msa1100020:intron | 45.0% | |
| CGTTAAGGGCCTATTTGTGT+GGG | + | chr7_3:29377789-29377808 | Msa1100020:intron | 45.0% | |
| TTCTTTAGTGACAGAGACGC+TGG | - | chr7_3:29378349-29378368 | None:intergenic | 45.0% | |
| GAAAATGGGGGAACACACAA+AGG | - | chr7_3:29378738-29378757 | None:intergenic | 45.0% | |
| !! | TGTTCCCCCATTTTCAAGCA+CGG | + | chr7_3:29378743-29378762 | Msa1100020:intron | 45.0% |
| ACTCACCGTGCTTGAAAATG+GGG | - | chr7_3:29378751-29378770 | None:intergenic | 45.0% | |
| GACTCACCGTGCTTGAAAAT+GGG | - | chr7_3:29378752-29378771 | None:intergenic | 45.0% | |
| TGACTCACCGTGCTTGAAAA+TGG | - | chr7_3:29378753-29378772 | None:intergenic | 45.0% | |
| GATATAAGGCACGGTAGGAA+CGG | - | chr7_3:29378828-29378847 | None:intergenic | 45.0% | |
| ACTCGTTGCTTGGGATTAGA+CGG | - | chr7_3:29378974-29378993 | None:intergenic | 45.0% | |
| TATTACTGTGGGTTCCCAAC+AGG | - | chr7_3:29379002-29379021 | None:intergenic | 45.0% | |
| TGTGCAAGAGCTTACTCACT+AGG | - | chr7_3:29379040-29379059 | None:intergenic | 45.0% | |
| ! | TGGAGTACTCGTTCATTGAC+AGG | + | chr7_3:29379185-29379204 | Msa1100020:CDS | 45.0% |
| CTCAAAAAAGGGCGGGATTA+GGG | - | chr7_3:29379508-29379527 | None:intergenic | 45.0% | |
| !!! | CTAATCCCGCCCTTTTTTGA+GGG | + | chr7_3:29379507-29379526 | Msa1100020:intron | 45.0% |
| !!! | TAATCCCGCCCTTTTTTGAG+GGG | + | chr7_3:29379508-29379527 | Msa1100020:intron | 45.0% |
| GATTCGAACCCATGCCATAT+TGG | + | chr7_3:29379565-29379584 | Msa1100020:intron | 45.0% | |
| ! | AAAAACAGCAAGTGGCTTGG+TGG | - | chr7_3:29379610-29379629 | None:intergenic | 45.0% |
| CACAAAAACAGCAAGTGGCT+TGG | - | chr7_3:29379613-29379632 | None:intergenic | 45.0% | |
| TGAGCAAAACACACCGAAGT+TGG | - | chr7_3:29379981-29380000 | None:intergenic | 45.0% | |
| GGTACATAAGACAATGGAGC+GGG | + | chr7_3:29380459-29380478 | Msa1100020:intron | 45.0% | |
| GTTGCGTTCATTGCAAACGA+TGG | - | chr7_3:29380616-29380635 | None:intergenic | 45.0% | |
| TCTCAAAACACCTCATGCTC+AGG | + | chr7_3:29380780-29380799 | Msa1100020:intron | 45.0% | |
| AAACACCTCATGCTCAGGAT+TGG | + | chr7_3:29380785-29380804 | Msa1100020:intron | 45.0% | |
| AACACCTCATGCTCAGGATT+GGG | + | chr7_3:29380786-29380805 | Msa1100020:intron | 45.0% | |
| ! | TCTACTCAATTGTGGCCTTG+TGG | + | chr7_3:29380956-29380975 | Msa1100020:intron | 45.0% |
| !! | CTACTCAATTGTGGCCTTGT+GGG | + | chr7_3:29380957-29380976 | Msa1100020:intron | 45.0% |
| !! | TGGTGTTGGTTTGGGATCTT+AGG | + | chr7_3:29381101-29381120 | Msa1100020:intron | 45.0% |
| !! | GGTGTTGGTTTGGGATCTTA+GGG | + | chr7_3:29381102-29381121 | Msa1100020:intron | 45.0% |
| ATTGAACCTGAGACCTTAGG+AGG | - | chr7_3:29381134-29381153 | None:intergenic | 45.0% | |
| TGGTTTACACCGAAGCAAAC+AGG | - | chr7_3:29381543-29381562 | None:intergenic | 45.0% | |
| GCAAAACAGTAGACTCCCAT+TGG | - | chr7_3:29381581-29381600 | None:intergenic | 45.0% | |
| ! | AGACGGTTTGGGAGAGATTA+TGG | + | chr7_3:29381904-29381923 | Msa1100020:intron | 45.0% |
| TCTCTTGAATGGTCAAGCAG+TGG | + | chr7_3:29382378-29382397 | Msa1100020:CDS | 45.0% | |
| ATATCGTGTTGGGCGTGAAT+TGG | + | chr7_3:29382435-29382454 | Msa1100020:CDS | 45.0% | |
| CTCCTGAATTTACGTCACGA+AGG | - | chr7_3:29382729-29382748 | None:intergenic | 45.0% | |
| TGCAACCTGTCTCGAAATCT+AGG | - | chr7_3:29382841-29382860 | None:intergenic | 45.0% | |
| GAAGTGCATTGCATTTGTCG+AGG | - | chr7_3:29382939-29382958 | None:intergenic | 45.0% | |
| GTTCTTGCCAAGTGTTATGG+TGG | + | chr7_3:29383057-29383076 | Msa1100020:CDS | 45.0% | |
| CGCTTCTTGTGGTACATCAA+CGG | - | chr7_3:29383154-29383173 | None:intergenic | 45.0% | |
| AGTTCATGGAACGCTTCTTG+TGG | - | chr7_3:29383165-29383184 | None:intergenic | 45.0% | |
| !! | CCGAAGCATTGGTGGTAGAT+AGG | + | chr7_3:29374816-29374835 | Msa1100020:intron | 50.0% |
| GGTCCTATATTTAGGGACGG+AGG | - | chr7_3:29376379-29376398 | None:intergenic | 50.0% | |
| AGGTCACTAGCTGCTTGTCA+GGG | + | chr7_3:29377025-29377044 | Msa1100020:CDS | 50.0% | |
| ! | AACATCGGCTAAAACTGGGG+TGG | + | chr7_3:29377237-29377256 | Msa1100020:CDS | 50.0% |
| ! | ACATCGGCTAAAACTGGGGT+GGG | + | chr7_3:29377238-29377257 | Msa1100020:CDS | 50.0% |
| GAAGATTCACTCTTCCCAGG+AGG | - | chr7_3:29377307-29377326 | None:intergenic | 50.0% | |
| TGCCATGTTGCTGTCGTTGA+TGG | + | chr7_3:29377379-29377398 | Msa1100020:CDS | 50.0% | |
| CACCATCAACGACAGCAACA+TGG | - | chr7_3:29377384-29377403 | None:intergenic | 50.0% | |
| AATCTTATCCCCCTTGCGCA+GGG | - | chr7_3:29377407-29377426 | None:intergenic | 50.0% | |
| AAATCTTATCCCCCTTGCGC+AGG | - | chr7_3:29377408-29377427 | None:intergenic | 50.0% | |
| GGGGGATAAGATTTCTTCGG+CGG | + | chr7_3:29377414-29377433 | Msa1100020:CDS | 50.0% | |
| TAAGATTTCTTCGGCGGCCA+CGG | + | chr7_3:29377420-29377439 | Msa1100020:CDS | 50.0% | |
| CATCCTGAACTTACGCCTAC+TGG | + | chr7_3:29377478-29377497 | Msa1100020:CDS | 50.0% | |
| ACTCCAGTAGGCGTAAGTTC+AGG | - | chr7_3:29377484-29377503 | None:intergenic | 50.0% | |
| ! | ACAACCAAAGAGGCACGCAT+TGG | + | chr7_3:29377547-29377566 | Msa1100020:CDS | 50.0% |
| ATCTCCAATGCGTGCCTCTT+TGG | - | chr7_3:29377554-29377573 | None:intergenic | 50.0% | |
| GTTGATGTGGAACCTCTTCC+AGG | + | chr7_3:29377598-29377617 | Msa1100020:CDS | 50.0% | |
| GTTATGAGAGCCATGCACGT+AGG | + | chr7_3:29377725-29377744 | Msa1100020:intron | 50.0% | |
| ! | TCGGGTCTTTTTCCAGCTGA+TGG | + | chr7_3:29378270-29378289 | Msa1100020:CDS | 50.0% |
| ! | ACTAGCACTGCTCTAGGTCT+AGG | + | chr7_3:29378369-29378388 | Msa1100020:CDS | 50.0% |
| ! | CTAGCACTGCTCTAGGTCTA+GGG | + | chr7_3:29378370-29378389 | Msa1100020:CDS | 50.0% |
| ! | TCTAGGTCTAGGGTTCAGGT+TGG | + | chr7_3:29378380-29378399 | Msa1100020:intron | 50.0% |
| ATGGGGGAACACACAAAGGT+CGG | - | chr7_3:29378734-29378753 | None:intergenic | 50.0% | |
| CTCACCGTGCTTGAAAATGG+GGG | - | chr7_3:29378750-29378769 | None:intergenic | 50.0% | |
| GGATTAGACGGTAATGCAGC+AGG | - | chr7_3:29378962-29378981 | None:intergenic | 50.0% | |
| GTCTAATCCCAAGCAACGAG+TGG | + | chr7_3:29378973-29378992 | Msa1100020:CDS | 50.0% | |
| TCGGAGAGAAGGGTGATAAC+AGG | - | chr7_3:29379148-29379167 | None:intergenic | 50.0% | |
| GGCGGGATTAGGGTTAATCA+GGG | - | chr7_3:29379498-29379517 | None:intergenic | 50.0% | |
| CCTCAAAAAAGGGCGGGATT+AGG | - | chr7_3:29379509-29379528 | None:intergenic | 50.0% | |
| !!! | CCTAATCCCGCCCTTTTTTG+AGG | + | chr7_3:29379506-29379525 | Msa1100020:intron | 50.0% |
| TCAGACCCCTCAAAAAAGGG+CGG | - | chr7_3:29379516-29379535 | None:intergenic | 50.0% | |
| CATGGGTTCGAATCTCTGGA+GGG | - | chr7_3:29379559-29379578 | None:intergenic | 50.0% | |
| ATGGCATGGGTTCGAATCTC+TGG | - | chr7_3:29379563-29379582 | None:intergenic | 50.0% | |
| AAACAAACCCGTGCATCGCA+CGG | + | chr7_3:29380092-29380111 | Msa1100020:intron | 50.0% | |
| AATGCCCAATCCTGAGCATG+AGG | - | chr7_3:29380793-29380812 | None:intergenic | 50.0% | |
| ATGCACATACACAGCCCACT+TGG | + | chr7_3:29381068-29381087 | Msa1100020:intron | 50.0% | |
| TGCACATACACAGCCCACTT+GGG | + | chr7_3:29381069-29381088 | Msa1100020:intron | 50.0% | |
| ! | CATGAAAACCCGTTGACTGC+AGG | - | chr7_3:29381359-29381378 | None:intergenic | 50.0% |
| GGCGGTTATAAGGAGGCAAA+AGG | - | chr7_3:29381494-29381513 | None:intergenic | 50.0% | |
| TCATGCAGGCGGTTATAAGG+AGG | - | chr7_3:29381501-29381520 | None:intergenic | 50.0% | |
| TACACCGAAGCAAACAGGAG+CGG | - | chr7_3:29381538-29381557 | None:intergenic | 50.0% | |
| GTTGAGGGATAAGGAGTTGG+AGG | + | chr7_3:29381676-29381695 | Msa1100020:intron | 50.0% | |
| TGGTCAAGCAGTGGATGCAA+TGG | + | chr7_3:29382387-29382406 | Msa1100020:CDS | 50.0% | |
| AGGGTCCTAGATTTCGAGAC+AGG | + | chr7_3:29382833-29382852 | Msa1100020:intron | 50.0% | |
| GAGGTCACTAGCTGCTTGTC+AGG | + | chr7_3:29377024-29377043 | Msa1100020:CDS | 55.0% | |
| ! | TGCTTGTCAGGGCGTGCTTT+TGG | + | chr7_3:29377036-29377055 | Msa1100020:CDS | 55.0% |
| GCTGATCCCGACCGTGTTAA+AGG | + | chr7_3:29377169-29377188 | Msa1100020:CDS | 55.0% | |
| GATTCACTCTTCCCAGGAGG+CGG | - | chr7_3:29377304-29377323 | None:intergenic | 55.0% | |
| AAGATTTCTTCGGCGGCCAC+GGG | + | chr7_3:29377421-29377440 | Msa1100020:CDS | 55.0% | |
| TGGCATGCGGACAACCAAAG+AGG | + | chr7_3:29377537-29377556 | Msa1100020:CDS | 55.0% | |
| ! | CTGCTCTAGGTCTAGGGTTC+AGG | + | chr7_3:29378376-29378395 | Msa1100020:CDS | 55.0% |
| CAGGCTACCACTCGTTGCTT+GGG | - | chr7_3:29378983-29379002 | None:intergenic | 55.0% | |
| ACAGGCTACCACTCGTTGCT+TGG | - | chr7_3:29378984-29379003 | None:intergenic | 55.0% | |
| AGCAACGAGTGGTAGCCTGT+TGG | + | chr7_3:29378984-29379003 | Msa1100020:CDS | 55.0% | |
| GCAACGAGTGGTAGCCTGTT+GGG | + | chr7_3:29378985-29379004 | Msa1100020:CDS | 55.0% | |
| CAACTGTTCACCCCTACGCT+CGG | - | chr7_3:29379167-29379186 | None:intergenic | 55.0% | |
| GGGCGGGATTAGGGTTAATC+AGG | - | chr7_3:29379499-29379518 | None:intergenic | 55.0% | |
| CAGACCCCTCAAAAAAGGGC+GGG | - | chr7_3:29379515-29379534 | None:intergenic | 55.0% | |
| GCATGGGTTCGAATCTCTGG+AGG | - | chr7_3:29379560-29379579 | None:intergenic | 55.0% | |
| AACAAACCCGTGCATCGCAC+GGG | + | chr7_3:29380093-29380112 | Msa1100020:intron | 55.0% | |
| CATACACAGCCCACTTGGGT+TGG | + | chr7_3:29381073-29381092 | Msa1100020:intron | 55.0% | |
| !! | TTGGCCTGGTGGTGTTGGTT+TGG | + | chr7_3:29381092-29381111 | Msa1100020:intron | 55.0% |
| !! | TGGCCTGGTGGTGTTGGTTT+GGG | + | chr7_3:29381093-29381112 | Msa1100020:intron | 55.0% |
| GATCCCAAACCAACACCACC+AGG | - | chr7_3:29381099-29381118 | None:intergenic | 55.0% | |
| ACACCGAAGCAAACAGGAGC+GGG | - | chr7_3:29381537-29381556 | None:intergenic | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+CGG | + | chr7_3:29381682-29381701 | Msa1100020:intron | 55.0% | |
| GATAAGGAGTTGGAGGTCCC+GGG | + | chr7_3:29381683-29381702 | Msa1100020:intron | 55.0% | |
| CTTTGTCCGGGTTTGAACCC+GGG | - | chr7_3:29381703-29381722 | None:intergenic | 55.0% | |
| CCTTTGTCCGGGTTTGAACC+CGG | - | chr7_3:29381704-29381723 | None:intergenic | 55.0% | |
| TCGTGTTGGGCGTGAATTGG+TGG | + | chr7_3:29382438-29382457 | Msa1100020:CDS | 55.0% | |
| ACACGGTCGGGATCAGCAGT+TGG | - | chr7_3:29377166-29377185 | None:intergenic | 60.0% | |
| AGCGTATACCTCCGCCTCCT+GGG | + | chr7_3:29377290-29377309 | Msa1100020:CDS | 60.0% | |
| !! | GTTGATGGTGCCCTGCGCAA+GGG | + | chr7_3:29377394-29377413 | Msa1100020:CDS | 60.0% |
| !! | TTGATGGTGCCCTGCGCAAG+GGG | + | chr7_3:29377395-29377414 | Msa1100020:CDS | 60.0% |
| TCACCCTTCTCTCCGAGCGT+AGG | + | chr7_3:29379152-29379171 | Msa1100020:CDS | 60.0% | |
| CACCCTTCTCTCCGAGCGTA+GGG | + | chr7_3:29379153-29379172 | Msa1100020:CDS | 60.0% | |
| ACCCTTCTCTCCGAGCGTAG+GGG | + | chr7_3:29379154-29379173 | Msa1100020:CDS | 60.0% | |
| ACCCCTACGCTCGGAGAGAA+GGG | - | chr7_3:29379158-29379177 | None:intergenic | 60.0% | |
| CGAGCGTAGGGGTGAACAGT+TGG | + | chr7_3:29379165-29379184 | Msa1100020:CDS | 60.0% | |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr7_3:29381085-29381104 | None:intergenic | 60.0% | |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr7_3:29381087-29381106 | Msa1100020:intron | 60.0% |
| CTTAGGGTGCGCTCCTCCTA+AGG | + | chr7_3:29381118-29381137 | Msa1100020:intron | 60.0% | |
| TGCGCTCCTCCTAAGGTCTC+AGG | + | chr7_3:29381125-29381144 | Msa1100020:intron | 60.0% | |
| GCACCCGCTCCTGTTTGCTT+CGG | + | chr7_3:29381531-29381550 | Msa1100020:intron | 60.0% | |
| CCGGGTTCAAACCCGGACAA+AGG | + | chr7_3:29381701-29381720 | Msa1100020:intron | 60.0% | |
| GAGCGTATACCTCCGCCTCC+TGG | + | chr7_3:29377289-29377308 | Msa1100020:CDS | 65.0% | |
| TCACTCTTCCCAGGAGGCGG+AGG | - | chr7_3:29377301-29377320 | None:intergenic | 65.0% | |
| !! | CGTTGATGGTGCCCTGCGCA+AGG | + | chr7_3:29377393-29377412 | Msa1100020:CDS | 65.0% |
| ! | TGATGGTGCCCTGCGCAAGG+GGG | + | chr7_3:29377396-29377415 | Msa1100020:CDS | 65.0% |
| CACCCCTACGCTCGGAGAGA+AGG | - | chr7_3:29379159-29379178 | None:intergenic | 65.0% | |
| ACCTCGACCCGTGCGATGCA+CGG | - | chr7_3:29380103-29380122 | None:intergenic | 65.0% | |
| !! | ACAGCCCACTTGGGTTGGCC+TGG | + | chr7_3:29381078-29381097 | Msa1100020:intron | 65.0% |
| CACCACCAGGCCAACCCAAG+TGG | - | chr7_3:29381086-29381105 | None:intergenic | 65.0% | |
| GGAGGTCCCGGGTTCAAACC+CGG | + | chr7_3:29381694-29381713 | Msa1100020:intron | 65.0% | |
| CCTCGACCCGTGCGATGCAC+GGG | - | chr7_3:29380102-29380121 | None:intergenic | 70.0% | |
| !! | GCCCACTTGGGTTGGCCTGG+TGG | + | chr7_3:29381081-29381100 | Msa1100020:intron | 70.0% |
| CCCGTGCATCGCACGGGTCG+AGG | + | chr7_3:29380099-29380118 | Msa1100020:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 29374110 | 29383728 | 29374110 | ID=Msa1100020;Name=Msa1100020 |
| chr7_3 | mRNA | 29374110 | 29383728 | 29374110 | ID=Msa1100020-mRNA-1;Parent=Msa1100020;Name=Msa1100020-mRNA-1;_AED=0.07;_eAED=0.07;_QI=38|1|1|1|0.90|0.83|12|386|672 |
| chr7_3 | exon | 29374110 | 29374471 | 29374110 | ID=Msa1100020-mRNA-1:exon:6199;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29376863 | 29377619 | 29376863 | ID=Msa1100020-mRNA-1:exon:6200;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29378241 | 29378397 | 29378241 | ID=Msa1100020-mRNA-1:exon:6201;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29378511 | 29378565 | 29378511 | ID=Msa1100020-mRNA-1:exon:6202;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29378800 | 29378867 | 29378800 | ID=Msa1100020-mRNA-1:exon:6203;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29378940 | 29379044 | 29378940 | ID=Msa1100020-mRNA-1:exon:6204;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29379135 | 29379206 | 29379135 | ID=Msa1100020-mRNA-1:exon:6205;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29381363 | 29381476 | 29381363 | ID=Msa1100020-mRNA-1:exon:6206;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29382345 | 29382485 | 29382345 | ID=Msa1100020-mRNA-1:exon:6207;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29382581 | 29382640 | 29382581 | ID=Msa1100020-mRNA-1:exon:6208;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29383035 | 29383234 | 29383035 | ID=Msa1100020-mRNA-1:exon:6209;Parent=Msa1100020-mRNA-1 |
| chr7_3 | exon | 29383377 | 29383728 | 29383377 | ID=Msa1100020-mRNA-1:exon:6210;Parent=Msa1100020-mRNA-1 |
| chr7_3 | five_prime_UTR | 29374110 | 29374147 | 29374110 | ID=Msa1100020-mRNA-1:five_prime_utr;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29374148 | 29374471 | 29374148 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29376863 | 29377619 | 29376863 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29378241 | 29378397 | 29378241 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29378511 | 29378565 | 29378511 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29378800 | 29378867 | 29378800 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29378940 | 29379044 | 29378940 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29379135 | 29379206 | 29379135 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29381363 | 29381476 | 29381363 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29382345 | 29382485 | 29382345 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29382581 | 29382640 | 29382581 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | CDS | 29383035 | 29383200 | 29383035 | ID=Msa1100020-mRNA-1:cds;Parent=Msa1100020-mRNA-1 |
| chr7_3 | three_prime_UTR | 29383201 | 29383234 | 29383201 | ID=Msa1100020-mRNA-1:three_prime_utr;Parent=Msa1100020-mRNA-1 |
| chr7_3 | three_prime_UTR | 29383377 | 29383728 | 29383377 | ID=Msa1100020-mRNA-1:three_prime_utr;Parent=Msa1100020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
