Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104820 | KEH22718.1 | 84.024 | 507 | 19 | 4 | 1 | 445 | 39 | 545 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104820 | sp|F4J7S8|SFH9_ARATH | 52.236 | 492 | 180 | 11 | 1 | 445 | 43 | 526 | 4.01e-168 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104820 | A0A072U0Q1 | 84.024 | 507 | 19 | 4 | 1 | 445 | 39 | 545 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1020760 | Msa1104820 | 0.863443 | 2.479841e-64 | -8.615850e-47 |
| Msa1055970 | Msa1104820 | 0.840370 | 9.057851e-58 | -8.615850e-47 |
| Msa1104820 | Msa1148320 | 0.867001 | 1.886976e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104820 | MtrunA17_Chr7g0236461 | 84.024 | 507 | 19 | 4 | 1 | 445 | 39 | 545 | 0.0 | 852 |
| Msa1104820 | MtrunA17_Chr5g0404711 | 46.429 | 448 | 181 | 10 | 10 | 447 | 39 | 437 | 1.17e-136 | 401 |
| Msa1104820 | MtrunA17_Chr1g0155521 | 43.962 | 530 | 208 | 11 | 1 | 443 | 50 | 577 | 4.82e-135 | 402 |
| Msa1104820 | MtrunA17_Chr4g0035391 | 63.251 | 283 | 95 | 2 | 10 | 283 | 70 | 352 | 6.02e-135 | 401 |
| Msa1104820 | MtrunA17_Chr3g0144911 | 60.667 | 300 | 93 | 3 | 1 | 275 | 48 | 347 | 1.73e-134 | 394 |
| Msa1104820 | MtrunA17_Chr3g0141821 | 63.736 | 273 | 90 | 2 | 14 | 277 | 60 | 332 | 2.38e-128 | 383 |
| Msa1104820 | MtrunA17_Chr8g0372651 | 44.632 | 475 | 218 | 11 | 10 | 443 | 42 | 512 | 4.41e-127 | 379 |
| Msa1104820 | MtrunA17_Chr3g0144891 | 43.100 | 471 | 226 | 11 | 10 | 443 | 60 | 525 | 1.38e-118 | 358 |
| Msa1104820 | MtrunA17_Chr3g0080051 | 57.190 | 306 | 106 | 4 | 1 | 281 | 41 | 346 | 8.63e-113 | 344 |
| Msa1104820 | MtrunA17_Chr8g0369291 | 40.935 | 535 | 218 | 13 | 1 | 445 | 34 | 560 | 5.41e-111 | 339 |
| Msa1104820 | MtrunA17_Chr4g0035361 | 43.880 | 433 | 201 | 8 | 48 | 443 | 2 | 429 | 6.93e-110 | 332 |
| Msa1104820 | MtrunA17_Chr4g0035381 | 51.331 | 263 | 119 | 2 | 24 | 277 | 61 | 323 | 9.78e-98 | 298 |
| Msa1104820 | MtrunA17_Chr5g0399151 | 46.545 | 275 | 138 | 2 | 14 | 279 | 82 | 356 | 3.03e-87 | 273 |
| Msa1104820 | MtrunA17_Chr4g0076441 | 28.364 | 275 | 162 | 10 | 42 | 291 | 26 | 290 | 3.00e-16 | 79.7 |
| Msa1104820 | MtrunA17_Chr3g0131581 | 27.907 | 258 | 133 | 11 | 16 | 250 | 37 | 264 | 1.07e-14 | 74.3 |
| Msa1104820 | MtrunA17_Chr2g0290661 | 28.351 | 194 | 121 | 6 | 47 | 232 | 38 | 221 | 2.64e-14 | 73.9 |
| Msa1104820 | MtrunA17_Chr3g0102691 | 28.922 | 204 | 118 | 7 | 42 | 232 | 26 | 215 | 2.96e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1104820 | AT3G24840.7 | 52.033 | 492 | 182 | 10 | 1 | 445 | 43 | 527 | 8.06e-170 | 489 |
| Msa1104820 | AT3G24840.3 | 52.033 | 492 | 182 | 10 | 1 | 445 | 43 | 527 | 8.06e-170 | 489 |
| Msa1104820 | AT3G24840.5 | 52.033 | 492 | 182 | 10 | 1 | 445 | 43 | 527 | 8.06e-170 | 489 |
| Msa1104820 | AT3G24840.1 | 52.236 | 492 | 180 | 11 | 1 | 445 | 43 | 526 | 4.08e-169 | 488 |
| Msa1104820 | AT3G24840.6 | 52.236 | 492 | 180 | 11 | 1 | 445 | 43 | 526 | 4.08e-169 | 488 |
| Msa1104820 | AT3G24840.4 | 52.236 | 492 | 180 | 11 | 1 | 445 | 43 | 526 | 4.08e-169 | 488 |
| Msa1104820 | AT3G24840.2 | 52.236 | 492 | 180 | 11 | 1 | 445 | 43 | 526 | 4.08e-169 | 488 |
| Msa1104820 | AT2G18180.2 | 45.022 | 462 | 217 | 9 | 14 | 443 | 48 | 504 | 4.27e-137 | 405 |
| Msa1104820 | AT2G18180.1 | 45.022 | 462 | 217 | 9 | 14 | 443 | 48 | 504 | 6.98e-137 | 405 |
| Msa1104820 | AT4G36490.1 | 42.455 | 497 | 224 | 9 | 2 | 447 | 20 | 505 | 1.17e-136 | 404 |
| Msa1104820 | AT2G21540.3 | 46.712 | 441 | 215 | 7 | 18 | 443 | 66 | 501 | 8.25e-133 | 394 |
| Msa1104820 | AT2G21540.5 | 46.712 | 441 | 215 | 7 | 18 | 443 | 66 | 501 | 8.25e-133 | 394 |
| Msa1104820 | AT2G21540.6 | 45.861 | 447 | 216 | 7 | 18 | 443 | 66 | 507 | 3.93e-132 | 392 |
| Msa1104820 | AT2G21540.2 | 45.861 | 447 | 216 | 7 | 18 | 443 | 66 | 507 | 3.93e-132 | 392 |
| Msa1104820 | AT2G21540.1 | 45.861 | 447 | 216 | 7 | 18 | 443 | 66 | 507 | 3.93e-132 | 392 |
| Msa1104820 | AT2G21540.4 | 45.861 | 447 | 216 | 7 | 18 | 443 | 66 | 507 | 3.93e-132 | 392 |
| Msa1104820 | AT4G39180.3 | 63.235 | 272 | 91 | 2 | 18 | 280 | 67 | 338 | 1.69e-129 | 385 |
| Msa1104820 | AT4G39180.2 | 63.235 | 272 | 91 | 2 | 18 | 280 | 67 | 338 | 1.69e-129 | 385 |
| Msa1104820 | AT4G39180.1 | 63.235 | 272 | 91 | 2 | 18 | 280 | 67 | 338 | 1.75e-129 | 385 |
| Msa1104820 | AT4G39170.1 | 59.060 | 298 | 99 | 3 | 1 | 275 | 48 | 345 | 5.19e-129 | 386 |
| Msa1104820 | AT4G39170.2 | 59.259 | 297 | 98 | 3 | 1 | 274 | 48 | 344 | 4.83e-128 | 384 |
| Msa1104820 | AT2G21520.2 | 57.000 | 300 | 104 | 3 | 1 | 275 | 52 | 351 | 1.73e-124 | 375 |
| Msa1104820 | AT2G21520.3 | 57.000 | 300 | 104 | 3 | 1 | 275 | 52 | 351 | 1.73e-124 | 375 |
| Msa1104820 | AT2G21520.1 | 57.000 | 300 | 104 | 3 | 1 | 275 | 48 | 347 | 1.92e-124 | 375 |
| Msa1104820 | AT2G18180.4 | 44.213 | 432 | 204 | 9 | 44 | 443 | 7 | 433 | 1.45e-123 | 368 |
| Msa1104820 | AT2G18180.3 | 44.213 | 432 | 204 | 9 | 44 | 443 | 7 | 433 | 1.96e-123 | 368 |
| Msa1104820 | AT4G34580.2 | 41.737 | 472 | 227 | 9 | 14 | 447 | 55 | 516 | 3.88e-121 | 364 |
| Msa1104820 | AT4G34580.1 | 41.737 | 472 | 227 | 9 | 14 | 447 | 55 | 516 | 3.88e-121 | 364 |
| Msa1104820 | AT1G75370.1 | 55.090 | 334 | 129 | 5 | 8 | 327 | 74 | 400 | 6.83e-118 | 358 |
| Msa1104820 | AT1G19650.3 | 58.423 | 279 | 107 | 2 | 8 | 277 | 65 | 343 | 2.78e-117 | 350 |
| Msa1104820 | AT1G75370.2 | 55.090 | 334 | 129 | 5 | 8 | 327 | 74 | 400 | 4.50e-117 | 357 |
| Msa1104820 | AT1G19650.1 | 41.434 | 502 | 226 | 12 | 8 | 443 | 65 | 564 | 6.19e-117 | 355 |
| Msa1104820 | AT2G16380.2 | 41.410 | 454 | 227 | 9 | 24 | 447 | 65 | 509 | 1.88e-113 | 344 |
| Msa1104820 | AT2G16380.1 | 41.410 | 454 | 227 | 9 | 24 | 447 | 65 | 509 | 1.88e-113 | 344 |
| Msa1104820 | AT2G18180.5 | 43.309 | 411 | 196 | 9 | 65 | 443 | 1 | 406 | 2.25e-113 | 341 |
| Msa1104820 | AT1G55690.3 | 52.186 | 366 | 147 | 7 | 1 | 339 | 40 | 404 | 5.16e-109 | 335 |
| Msa1104820 | AT1G55690.2 | 52.186 | 366 | 147 | 7 | 1 | 339 | 40 | 404 | 6.00e-109 | 335 |
| Msa1104820 | AT1G55690.4 | 52.186 | 366 | 147 | 7 | 1 | 339 | 40 | 404 | 6.00e-109 | 335 |
| Msa1104820 | AT1G55690.1 | 52.186 | 366 | 147 | 7 | 1 | 339 | 40 | 404 | 6.00e-109 | 335 |
| Msa1104820 | AT1G55690.5 | 52.186 | 366 | 147 | 7 | 1 | 339 | 40 | 404 | 6.00e-109 | 335 |
| Msa1104820 | AT5G56160.2 | 52.632 | 304 | 120 | 4 | 1 | 280 | 34 | 337 | 3.78e-108 | 329 |
| Msa1104820 | AT5G56160.1 | 39.406 | 505 | 245 | 9 | 1 | 445 | 34 | 537 | 4.46e-108 | 332 |
| Msa1104820 | AT5G56160.3 | 39.406 | 505 | 245 | 9 | 1 | 445 | 34 | 537 | 4.46e-108 | 332 |
| Msa1104820 | AT1G19650.2 | 40.812 | 468 | 208 | 13 | 42 | 443 | 28 | 492 | 2.80e-105 | 323 |
| Msa1104820 | AT2G16380.3 | 39.952 | 413 | 209 | 9 | 65 | 447 | 1 | 404 | 3.54e-96 | 296 |
| Msa1104820 | AT5G47510.2 | 47.876 | 259 | 126 | 2 | 22 | 271 | 26 | 284 | 1.56e-85 | 266 |
| Msa1104820 | AT5G47510.4 | 47.510 | 261 | 128 | 2 | 22 | 273 | 26 | 286 | 3.03e-85 | 266 |
| Msa1104820 | AT5G47510.1 | 47.510 | 261 | 128 | 2 | 22 | 273 | 25 | 285 | 3.89e-85 | 266 |
| Msa1104820 | AT5G47510.3 | 47.788 | 226 | 109 | 2 | 55 | 271 | 2 | 227 | 1.70e-74 | 236 |
| Msa1104820 | AT5G47730.4 | 28.000 | 225 | 139 | 7 | 22 | 232 | 6 | 221 | 1.15e-14 | 75.5 |
| Msa1104820 | AT5G47730.1 | 28.000 | 225 | 139 | 7 | 22 | 232 | 6 | 221 | 1.15e-14 | 75.5 |
| Msa1104820 | AT1G72160.1 | 25.652 | 230 | 135 | 8 | 48 | 255 | 167 | 382 | 3.36e-11 | 65.5 |
Find 129 sgRNAs with CRISPR-Local
Find 555 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGTATATACAATTATTT+TGG | 0.177223 | 7_3:-42633761 | None:intergenic |
| CACTCATCCTCGGAGGTTTC+AGG | 0.193320 | 7_3:-42631715 | None:intergenic |
| GCAACAAAGCCAACGAAATT+TGG | 0.209682 | 7_3:+42634206 | Msa1104820:CDS |
| TTGGCAGAGGTTGCGGGATT+TGG | 0.245490 | 7_3:+42638326 | Msa1104820:CDS |
| TCCCGCAACCTCTGCCAAAT+TGG | 0.260370 | 7_3:-42638321 | None:intergenic |
| CGGATATAAAAGAGCCAATT+TGG | 0.270344 | 7_3:+42638307 | Msa1104820:CDS |
| ACTTCTCTTGACTTATATAA+AGG | 0.272029 | 7_3:+42639308 | Msa1104820:three_prime_UTR |
| AGATGAGAGGAGTAGAAGTT+TGG | 0.288981 | 7_3:+42631690 | Msa1104820:five_prime_UTR |
| ATCAACATCACCAACTTCTT+TGG | 0.298243 | 7_3:-42636217 | None:intergenic |
| CTTGCTGCCTTGAATAGATT+GGG | 0.303409 | 7_3:-42639474 | None:intergenic |
| ATTCACAGCTTCTTCCTCTT+TGG | 0.304303 | 7_3:-42631875 | None:intergenic |
| TAGCATGGTCACTCATAAAT+TGG | 0.316701 | 7_3:+42634271 | Msa1104820:CDS |
| ATATAAGTCAAGAGAAGTTT+AGG | 0.319622 | 7_3:-42639303 | None:intergenic |
| CCAAGACATCCTCCATCATT+TGG | 0.336385 | 7_3:-42634027 | None:intergenic |
| GCCAATTTGGCAGAGGTTGC+GGG | 0.336971 | 7_3:+42638320 | Msa1104820:CDS |
| TGCAAACTGATGATGTAAAT+AGG | 0.348747 | 7_3:-42639229 | None:intergenic |
| AAGGTACTTCCATTTCTTCC+AGG | 0.351464 | 7_3:-42639398 | None:intergenic |
| TTCTCACGAGGAATTGTTCT+CGG | 0.353462 | 7_3:-42638378 | None:intergenic |
| AATAGGTATACTCATCTTCC+AGG | 0.355517 | 7_3:-42639212 | None:intergenic |
| CACACACACCCTGGAAGAAA+TGG | 0.361574 | 7_3:+42639389 | Msa1104820:three_prime_UTR |
| ATGGCTTCTTGGTTGGTTGT+TGG | 0.366905 | 7_3:-42638235 | None:intergenic |
| AGGTTTGAGGAATGAGATAT+GGG | 0.371328 | 7_3:+42639439 | Msa1104820:three_prime_UTR |
| TCTTGCTGCCTTGAATAGAT+TGG | 0.376833 | 7_3:-42639475 | None:intergenic |
| TAGGTTTGAGGAATGAGATA+TGG | 0.378620 | 7_3:+42639438 | Msa1104820:three_prime_UTR |
| TATAAAGGATTTACTCTCAT+AGG | 0.382767 | 7_3:+42639323 | Msa1104820:three_prime_UTR |
| TATGTAGGATTTCGTATATA+AGG | 0.388118 | 7_3:+42632804 | Msa1104820:intron |
| CTCCATTGGAGAAAGGAGTA+TGG | 0.389408 | 7_3:+42632532 | Msa1104820:CDS |
| CAACTTCCACCCAGAAAATC+AGG | 0.390012 | 7_3:-42633997 | None:intergenic |
| GTAGTGGGTTCAAGCTAGTA+TGG | 0.398113 | 7_3:+42633701 | Msa1104820:CDS |
| GGAGCATATCTGCCCACATC+TGG | 0.403184 | 7_3:-42632513 | None:intergenic |
| GTGACATTCATCAACTTGAT+AGG | 0.405206 | 7_3:-42632922 | None:intergenic |
| GTTGCTTCTGACGTTGATCC+AGG | 0.406245 | 7_3:-42634426 | None:intergenic |
| CAGCTCACATTCTCGCTAGA+AGG | 0.408987 | 7_3:-42634480 | None:intergenic |
| ATGATGTCATACTTTCGAAA+TGG | 0.415030 | 7_3:-42634079 | None:intergenic |
| AGCCAATTTGGCAGAGGTTG+CGG | 0.415753 | 7_3:+42638319 | Msa1104820:CDS |
| TTCATTGTCAATGCTGGTAG+TGG | 0.424448 | 7_3:+42633685 | Msa1104820:CDS |
| CAAGACATCCTCCATCATTT+GGG | 0.424664 | 7_3:-42634026 | None:intergenic |
| AGTCTCGAGCTAGATCTCTT+AGG | 0.425872 | 7_3:+42631743 | Msa1104820:five_prime_UTR |
| CAGCATTGACAATGAACATC+TGG | 0.433020 | 7_3:-42633678 | None:intergenic |
| AACAATAATGCCAAAGAAGT+TGG | 0.444155 | 7_3:+42636207 | Msa1104820:CDS |
| AAAATTTGACATTGATAAAA+CGG | 0.445534 | 7_3:+42632489 | Msa1104820:CDS |
| GCATTGTGTGATAATTATCA+TGG | 0.445665 | 7_3:-42631942 | None:intergenic |
| TGATAATTATCATGGGAATC+TGG | 0.446600 | 7_3:-42631934 | None:intergenic |
| CTAGTATGGAATACAGCAAA+AGG | 0.461742 | 7_3:+42633715 | Msa1104820:CDS |
| CATTATTGTTTGCCTCAACT+AGG | 0.466176 | 7_3:-42636194 | None:intergenic |
| TCTGAGTTATTCCTCTCAAT+AGG | 0.471799 | 7_3:+42639520 | Msa1104820:three_prime_UTR |
| CTCCATACTCCTTTCTCCAA+TGG | 0.473262 | 7_3:-42632534 | None:intergenic |
| GCAGAGGTTGCGGGATTTGG+AGG | 0.478420 | 7_3:+42638329 | Msa1104820:CDS |
| AACAATTCCTCGTGAGAAAG+AGG | 0.480731 | 7_3:+42638383 | Msa1104820:CDS |
| AGAAGGAACTGATTGCATAA+AGG | 0.486246 | 7_3:-42634463 | None:intergenic |
| TACTTCTGTGATATATCCAC+AGG | 0.486527 | 7_3:+42639352 | Msa1104820:three_prime_UTR |
| AGCTGTGAATTCATTTAGAC+TGG | 0.489026 | 7_3:+42631888 | Msa1104820:CDS |
| GAAGAACTTCCAAATTTCGT+TGG | 0.502786 | 7_3:-42634215 | None:intergenic |
| TTGCTGCCTTGAATAGATTG+GGG | 0.503663 | 7_3:-42639473 | None:intergenic |
| TAACCTCTAACAATCTGCTC+TGG | 0.504827 | 7_3:-42633869 | None:intergenic |
| CAAGACTCACTTATAGTCTC+AGG | 0.512332 | 7_3:+42631788 | Msa1104820:CDS |
| ACTGATTGCATAAAGGTTGA+AGG | 0.514862 | 7_3:-42634456 | None:intergenic |
| GAGAGCTGGATGCCACCGGC+TGG | 0.516024 | 7_3:-42638266 | None:intergenic |
| GCCTCAACTAGGTTGCAGAT+AGG | 0.516350 | 7_3:-42636183 | None:intergenic |
| CACCCAGAAAATCAGGAAGT+TGG | 0.516687 | 7_3:-42633990 | None:intergenic |
| CAGATGTTCATTGTCAATGC+TGG | 0.517230 | 7_3:+42633679 | Msa1104820:CDS |
| AGGTACTTCCATTTCTTCCA+GGG | 0.517354 | 7_3:-42639397 | None:intergenic |
| CCAAATGATGGAGGATGTCT+TGG | 0.520026 | 7_3:+42634027 | Msa1104820:CDS |
| TTGATAAAACGGTCCAGATG+TGG | 0.520171 | 7_3:+42632500 | Msa1104820:CDS |
| TTGGATCTAACAAGGGACCT+TGG | 0.533848 | 7_3:+42634046 | Msa1104820:CDS |
| AATTTATGAGTGACCATGCT+AGG | 0.540881 | 7_3:-42634269 | None:intergenic |
| CCAGTGTATATTGAGAGACT+TGG | 0.541011 | 7_3:+42632889 | Msa1104820:CDS |
| TGCTGCCTTGAATAGATTGG+GGG | 0.544053 | 7_3:-42639472 | None:intergenic |
| GGTTAATTGATTGAGAGAGC+TGG | 0.546632 | 7_3:-42638280 | None:intergenic |
| AGTCAAGAGAAGTTTAGGTC+CGG | 0.546653 | 7_3:-42639298 | None:intergenic |
| AGACTTCCGCCACTCATCCT+CGG | 0.549948 | 7_3:-42631725 | None:intergenic |
| CGTATATAAGGAGTTTGAAG+AGG | 0.552893 | 7_3:+42632816 | Msa1104820:CDS |
| AGTTGTTCATGCCCAAATGA+TGG | 0.558876 | 7_3:+42634015 | Msa1104820:CDS |
| TGTGGGCAGATATGCTCCAT+TGG | 0.561517 | 7_3:+42632518 | Msa1104820:CDS |
| TAAAAGAGCCAATTTGGCAG+AGG | 0.562927 | 7_3:+42638313 | Msa1104820:CDS |
| CTCTGCGGCTGAATTACTAC+CGG | 0.564828 | 7_3:+42639279 | Msa1104820:three_prime_UTR |
| GTTCAGCGTTATTACCCTCA+TGG | 0.565031 | 7_3:+42632838 | Msa1104820:CDS |
| TGTCATACTTTCGAAATGGA+AGG | 0.569629 | 7_3:-42634075 | None:intergenic |
| AGATATGCTCCATTGGAGAA+AGG | 0.571324 | 7_3:+42632525 | Msa1104820:CDS |
| AACACTGAAATATCTGAACC+TGG | 0.573828 | 7_3:+42634408 | Msa1104820:CDS |
| ATAGGTATACTCATCTTCCA+GGG | 0.575238 | 7_3:-42639211 | None:intergenic |
| TAATAGTTCAAGAAGATGAG+AGG | 0.575754 | 7_3:+42631677 | None:intergenic |
| TTTGCTGCTATAGAACATGC+AGG | 0.579513 | 7_3:-42633009 | None:intergenic |
| TTAATGCTACAGGTTTCTGA+AGG | 0.583106 | 7_3:+42632462 | Msa1104820:intron |
| TGATAAAACGGTCCAGATGT+GGG | 0.584450 | 7_3:+42632501 | Msa1104820:CDS |
| ACCTATCTGCAACCTAGTTG+AGG | 0.587036 | 7_3:+42636182 | Msa1104820:CDS |
| TATTACCCTCATGGTATGCA+TGG | 0.591911 | 7_3:+42632847 | Msa1104820:CDS |
| CATTGTGTGATAATTATCAT+GGG | 0.600169 | 7_3:-42631941 | None:intergenic |
| GTCATACTTTCGAAATGGAA+GGG | 0.600302 | 7_3:-42634074 | None:intergenic |
| TCATTGTCAATGCTGGTAGT+GGG | 0.602158 | 7_3:+42633686 | Msa1104820:CDS |
| CTGAAACCTCCGAGGATGAG+TGG | 0.603268 | 7_3:+42631716 | Msa1104820:five_prime_UTR |
| GAAATGGAAGGGTCATTCCA+AGG | 0.607226 | 7_3:-42634063 | None:intergenic |
| TTGAGAGAGCTGGATGCCAC+CGG | 0.608136 | 7_3:-42638270 | None:intergenic |
| TGCATGGTGTGGACAAAGAG+GGG | 0.609270 | 7_3:+42632863 | Msa1104820:CDS |
| TACAGGGGACAAAATCATGT+TGG | 0.611303 | 7_3:+42639168 | Msa1104820:intron |
| ATGCATGGTGTGGACAAAGA+GGG | 0.611322 | 7_3:+42632862 | Msa1104820:CDS |
| AGGATGTCTTGGATCTAACA+AGG | 0.613016 | 7_3:+42634038 | Msa1104820:CDS |
| GGTTTGAGGAATGAGATATG+GGG | 0.618713 | 7_3:+42639440 | Msa1104820:three_prime_UTR |
| CCAAGTCTCTCAATATACAC+TGG | 0.623189 | 7_3:-42632889 | None:intergenic |
| AGATGTTCGGGATGCCAAAG+AGG | 0.626648 | 7_3:+42631861 | Msa1104820:CDS |
| GTACTCTCACACACACACCC+TGG | 0.628546 | 7_3:+42639380 | Msa1104820:three_prime_UTR |
| CCCTCATGGTATGCATGGTG+TGG | 0.629363 | 7_3:+42632852 | Msa1104820:CDS |
| CACCGAGTCATATCCTAGCA+TGG | 0.636928 | 7_3:+42634256 | Msa1104820:CDS |
| AAGCCATCAGAAAATCCAGC+CGG | 0.639669 | 7_3:+42638251 | Msa1104820:CDS |
| TATGCATGGTGTGGACAAAG+AGG | 0.640193 | 7_3:+42632861 | Msa1104820:CDS |
| GACCATGCTAGGATATGACT+CGG | 0.641917 | 7_3:-42634258 | None:intergenic |
| ACATAATAATACCTATTGAG+AGG | 0.646009 | 7_3:-42639531 | None:intergenic |
| AGAATATCCTCTTTCTCACG+AGG | 0.648401 | 7_3:-42638390 | None:intergenic |
| TTGCTGCTATAGAACATGCA+GGG | 0.661177 | 7_3:-42633008 | None:intergenic |
| ATAATTATCACACAATGCTG+AGG | 0.661865 | 7_3:+42631947 | Msa1104820:CDS |
| CCACACCATGCATACCATGA+GGG | 0.664021 | 7_3:-42632852 | None:intergenic |
| CTAGGTTGCAGATAGGTGCA+CGG | 0.665393 | 7_3:-42636176 | None:intergenic |
| GGAGGCAGTAGTGACTGAGA+TGG | 0.665960 | 7_3:+42638347 | Msa1104820:CDS |
| CATGTTCTATAGCAGCAAAG+CGG | 0.666814 | 7_3:+42633013 | Msa1104820:CDS |
| ACTACAATAATTGATGTGCA+CGG | 0.666903 | 7_3:+42633051 | Msa1104820:CDS |
| CTTCCGCCACTCATCCTCGG+AGG | 0.672856 | 7_3:-42631722 | None:intergenic |
| CCATCAGAAAATCCAGCCGG+TGG | 0.673635 | 7_3:+42638254 | Msa1104820:CDS |
| TCTCAATCAATTAACCACCC+CGG | 0.683871 | 7_3:+42638287 | Msa1104820:CDS |
| TCCACACCATGCATACCATG+AGG | 0.688993 | 7_3:-42632853 | None:intergenic |
| AATAATTGATGTGCACGGCG+TGG | 0.689010 | 7_3:+42633056 | Msa1104820:CDS |
| GGATGTCTTGGATCTAACAA+GGG | 0.691292 | 7_3:+42634039 | Msa1104820:CDS |
| TGTGAGAGTACAAAATCCTG+TGG | 0.695415 | 7_3:-42639368 | None:intergenic |
| AAACCTCCGAGGATGAGTGG+CGG | 0.701273 | 7_3:+42631719 | Msa1104820:five_prime_UTR |
| ATGGTGTGGACAAAGAGGGG+CGG | 0.702284 | 7_3:+42632866 | Msa1104820:CDS |
| AATGTAGTAAGAAAACAATG+TGG | 0.704814 | 7_3:-42639557 | None:intergenic |
| TAGGTATACTCATCTTCCAG+GGG | 0.708380 | 7_3:-42639210 | None:intergenic |
| TGTTCATGCCCAAATGATGG+AGG | 0.726201 | 7_3:+42634018 | Msa1104820:CDS |
| TGATGGTGATAATTACCCTG+AGG | 0.740202 | 7_3:+42633219 | Msa1104820:CDS |
| TTTGGAGCCTGAAACCTCCG+AGG | 0.748197 | 7_3:+42631708 | Msa1104820:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATAAATTTAAATATCAT+TGG | + | chr7_3:42632028-42632047 | Msa1104820:intron | 10.0% |
| !! | TAAAACAATAAATAATATGT+AGG | + | chr7_3:42632789-42632808 | Msa1104820:intron | 10.0% |
| !! | AAAAAAAAAAAAAAGAATAC+TGG | - | chr7_3:42634309-42634328 | None:intergenic | 10.0% |
| !! | ATACTAAGAATTATAAAATT+GGG | + | chr7_3:42634586-42634605 | Msa1104820:intron | 10.0% |
| !!! | TATTAATTTTTTTTTTCTCT+TGG | + | chr7_3:42635437-42635456 | Msa1104820:intron | 10.0% |
| !! | AATTAAATTTACTTCTCATT+TGG | + | chr7_3:42631986-42632005 | Msa1104820:intron | 15.0% |
| !!! | TATTCTTTCTTTTTTAACAT+AGG | + | chr7_3:42632240-42632259 | Msa1104820:intron | 15.0% |
| !!! | ATTCTTTCTTTTTTAACATA+GGG | + | chr7_3:42632241-42632260 | Msa1104820:intron | 15.0% |
| !!! | GTTTTAAAATATCAAAGAAT+GGG | - | chr7_3:42632307-42632326 | None:intergenic | 15.0% |
| !!! | AGTTTTAAAATATCAAAGAA+TGG | - | chr7_3:42632308-42632327 | None:intergenic | 15.0% |
| !!! | AGAATTGATTTTTTTTAACA+AGG | + | chr7_3:42632351-42632370 | Msa1104820:intron | 15.0% |
| !! | AAAATTTGACATTGATAAAA+CGG | + | chr7_3:42632489-42632508 | Msa1104820:CDS | 15.0% |
| !! | CTAATCAAACATATAATATT+TGG | - | chr7_3:42632736-42632755 | None:intergenic | 15.0% |
| !! | CAAATATTATATGTTTGATT+AGG | + | chr7_3:42632734-42632753 | Msa1104820:intron | 15.0% |
| !!! | GAAAGTATATACAATTATTT+TGG | - | chr7_3:42633764-42633783 | None:intergenic | 15.0% |
| !! | GATACTAAGAATTATAAAAT+TGG | + | chr7_3:42634585-42634604 | Msa1104820:intron | 15.0% |
| !! | TACTAAGAATTATAAAATTG+GGG | + | chr7_3:42634587-42634606 | Msa1104820:intron | 15.0% |
| !! | TTGTTAAAGAAATATGTAAA+TGG | + | chr7_3:42634925-42634944 | Msa1104820:intron | 15.0% |
| !! | TTAGTTTACTCAAAAAATAT+TGG | + | chr7_3:42635369-42635388 | Msa1104820:intron | 15.0% |
| !!! | TTAAATTTTAATAAATTGGC+AGG | + | chr7_3:42635687-42635706 | Msa1104820:intron | 15.0% |
| !!! | TAAATTTTAATAAATTGGCA+GGG | + | chr7_3:42635688-42635707 | Msa1104820:intron | 15.0% |
| !!! | GAAATTTTTATGAATTAAAG+TGG | + | chr7_3:42635931-42635950 | Msa1104820:intron | 15.0% |
| !!! | TAGTACATTTTAAGAAATAA+AGG | - | chr7_3:42636394-42636413 | None:intergenic | 15.0% |
| !!! | ACTAATTATACTTTGAAAAA+TGG | + | chr7_3:42638056-42638075 | Msa1104820:intron | 15.0% |
| !!! | CAATTTTTATAGAAGATGTT+CGG | + | chr7_3:42631848-42631867 | Msa1104820:intron | 20.0% |
| !!! | AATTTTTATAGAAGATGTTC+GGG | + | chr7_3:42631849-42631868 | Msa1104820:intron | 20.0% |
| !!! | CTCATTGATTCAAATTTTAA+AGG | + | chr7_3:42632066-42632085 | Msa1104820:intron | 20.0% |
| !!! | TGTTTATTTTATGTTAGTCA+TGG | + | chr7_3:42632095-42632114 | Msa1104820:intron | 20.0% |
| !!! | ATATGATTTTTCTTTCACAT+TGG | + | chr7_3:42632189-42632208 | Msa1104820:intron | 20.0% |
| !!! | TTTATCAATGTCAAATTTTC+TGG | - | chr7_3:42632488-42632507 | None:intergenic | 20.0% |
| !!! | ATTTTAAACTTTTCATCTGA+AGG | + | chr7_3:42632761-42632780 | Msa1104820:intron | 20.0% |
| !!! | ATTTTTAAGATATCATGTTC+AGG | + | chr7_3:42632957-42632976 | Msa1104820:intron | 20.0% |
| !!! | TTTTTAAGATATCATGTTCA+GGG | + | chr7_3:42632958-42632977 | Msa1104820:intron | 20.0% |
| !!! | CTTTCTATATTTTTCAGAAT+TGG | + | chr7_3:42633146-42633165 | Msa1104820:intron | 20.0% |
| !!! | ATAGTAGTGATCTTTTAAAT+TGG | + | chr7_3:42633287-42633306 | Msa1104820:intron | 20.0% |
| !!! | CTTAATCATTTTAAGAATCT+CGG | - | chr7_3:42633332-42633351 | None:intergenic | 20.0% |
| !!! | AATGCAATTTTGTACAAATT+AGG | + | chr7_3:42633396-42633415 | Msa1104820:intron | 20.0% |
| !!! | ATGCAATTTTGTACAAATTA+GGG | + | chr7_3:42633397-42633416 | Msa1104820:intron | 20.0% |
| !!! | TTTTTACATGTAGAAGTTAT+AGG | + | chr7_3:42634536-42634555 | Msa1104820:intron | 20.0% |
| !!! | TTTTACATGTAGAAGTTATA+GGG | + | chr7_3:42634537-42634556 | Msa1104820:intron | 20.0% |
| !! | TTTATATCATATAATGTGAG+TGG | + | chr7_3:42634773-42634792 | Msa1104820:intron | 20.0% |
| !!! | CATTTTATTATAGAAGACAA+AGG | + | chr7_3:42634803-42634822 | Msa1104820:intron | 20.0% |
| !! | AATATCATGATTAATTGAAG+AGG | - | chr7_3:42634863-42634882 | None:intergenic | 20.0% |
| !!! | AAGTAATATTTTATGAAACC+TGG | + | chr7_3:42634979-42634998 | Msa1104820:intron | 20.0% |
| !!! | ATATGCAATGTCTAAAATAT+AGG | + | chr7_3:42635034-42635053 | Msa1104820:intron | 20.0% |
| !! | CTTTCAAAATTAAGCAAATA+TGG | - | chr7_3:42635340-42635359 | None:intergenic | 20.0% |
| !!! | TGCTTAATTTTGAAAGTAAA+AGG | + | chr7_3:42635344-42635363 | Msa1104820:intron | 20.0% |
| !!! | CATTTTTGTCATGAAAATAT+TGG | + | chr7_3:42635563-42635582 | Msa1104820:intron | 20.0% |
| !! | ATAAAGAAGTCAAACATAAT+TGG | + | chr7_3:42635636-42635655 | Msa1104820:intron | 20.0% |
| !!! | TTACCAAATTTTGAACTTAA+TGG | + | chr7_3:42635790-42635809 | Msa1104820:intron | 20.0% |
| !! | TTTCCATTAAGTTCAAAATT+TGG | - | chr7_3:42635796-42635815 | None:intergenic | 20.0% |
| !! | AAATAAATAAAACTGGTGTA+CGG | + | chr7_3:42635907-42635926 | Msa1104820:intron | 20.0% |
| !! | AATGACTGAAAATTACATTT+AGG | - | chr7_3:42636046-42636065 | None:intergenic | 20.0% |
| !!! | AATTATAATACGCATGATTT+TGG | - | chr7_3:42636259-42636278 | None:intergenic | 20.0% |
| !! | AATCATGCGTATTATAATTA+TGG | + | chr7_3:42636260-42636279 | Msa1104820:intron | 20.0% |
| !!! | TTAATTTTTGACGTTTCAAA+TGG | + | chr7_3:42636452-42636471 | Msa1104820:intron | 20.0% |
| !! | AATTTCAATCAAAACTTGAT+TGG | + | chr7_3:42636795-42636814 | Msa1104820:intron | 20.0% |
| !!! | TCATTTTCAATTTGGTAAAT+TGG | + | chr7_3:42637378-42637397 | Msa1104820:intron | 20.0% |
| !!! | CATTTTCAATTTGGTAAATT+GGG | + | chr7_3:42637379-42637398 | Msa1104820:intron | 20.0% |
| !!! | ATTTTCAATTTGGTAAATTG+GGG | + | chr7_3:42637380-42637399 | Msa1104820:intron | 20.0% |
| !!! | AACAATGAATAGTACATTTT+AGG | + | chr7_3:42637537-42637556 | Msa1104820:intron | 20.0% |
| !! | ATTTAGAAAACTATTTCACT+TGG | + | chr7_3:42637783-42637802 | Msa1104820:intron | 20.0% |
| !!! | AAAATATTCTGAAAATATGG+CGG | - | chr7_3:42637848-42637867 | None:intergenic | 20.0% |
| !!! | CTGAAAATATTCTGAAAATA+TGG | - | chr7_3:42637851-42637870 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTCATTC+CGG | + | chr7_3:42638609-42638628 | Msa1104820:intron | 20.0% |
| !! | TCTGCATTAAATGAAAATAA+AGG | - | chr7_3:42638870-42638889 | None:intergenic | 20.0% |
| !! | ATGTAAAAAAAAATTCCAAG+TGG | - | chr7_3:42638906-42638925 | None:intergenic | 20.0% |
| !!! | TGATAACTTTCTAAAAATAC+AGG | + | chr7_3:42639151-42639170 | Msa1104820:intron | 20.0% |
| !!! | GATAACTTTCTAAAAATACA+GGG | + | chr7_3:42639152-42639171 | Msa1104820:intron | 20.0% |
| !!! | ATAACTTTCTAAAAATACAG+GGG | + | chr7_3:42639153-42639172 | Msa1104820:intron | 20.0% |
| !! | TAGCATTTATATGCAAAAAA+AGG | + | chr7_3:42639631-42639650 | Msa1104820:three_prime_UTR | 20.0% |
| !! | AGCATTTATATGCAAAAAAA+GGG | + | chr7_3:42639632-42639651 | Msa1104820:three_prime_UTR | 20.0% |
| ! | CATTGTGTGATAATTATCAT+GGG | - | chr7_3:42631944-42631963 | None:intergenic | 25.0% |
| ! | AGAAAAATCATATTGAAGAG+AGG | - | chr7_3:42632182-42632201 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTTAACATAGGGT+TGG | + | chr7_3:42632245-42632264 | Msa1104820:intron | 25.0% |
| ! | TTACACATGTAGTATATTAC+AGG | + | chr7_3:42632428-42632447 | Msa1104820:intron | 25.0% |
| !! | TCTATTTTACAGGTAAAGTT+TGG | + | chr7_3:42632562-42632581 | Msa1104820:intron | 25.0% |
| ! | TATGTAGGATTTCGTATATA+AGG | + | chr7_3:42632804-42632823 | Msa1104820:intron | 25.0% |
| ! | TCTTAAAAATCGATCTATTG+TGG | - | chr7_3:42632947-42632966 | None:intergenic | 25.0% |
| !!! | AAAGTTGCATTTGGTAATTT+TGG | + | chr7_3:42633603-42633622 | Msa1104820:intron | 25.0% |
| !!! | ATATACAATTATTTTGGCTG+TGG | - | chr7_3:42633758-42633777 | None:intergenic | 25.0% |
| ! | GTGCATATACATGTAAATAT+AGG | + | chr7_3:42635071-42635090 | Msa1104820:intron | 25.0% |
| !!! | AAACAATATTTTGAGCACAA+AGG | + | chr7_3:42635269-42635288 | Msa1104820:intron | 25.0% |
| ! | GTTTACTCAAAAAATATTGG+AGG | + | chr7_3:42635372-42635391 | Msa1104820:intron | 25.0% |
| ! | TTTGTCATGAAAATATTGGT+CGG | + | chr7_3:42635567-42635586 | Msa1104820:intron | 25.0% |
| ! | GTTGCGAAATTAAAAATTTG+AGG | + | chr7_3:42635599-42635618 | Msa1104820:intron | 25.0% |
| !! | TATGTTTGACTTCTTTATCT+TGG | - | chr7_3:42635634-42635653 | None:intergenic | 25.0% |
| !! | AGTTCAAAATTTGGTAACTA+TGG | - | chr7_3:42635787-42635806 | None:intergenic | 25.0% |
| ! | AATAAATAAAACTGGTGTAC+GGG | + | chr7_3:42635908-42635927 | Msa1104820:intron | 25.0% |
| ! | ATGGAATTATATTGCAGAAA+AGG | + | chr7_3:42636145-42636164 | Msa1104820:intron | 25.0% |
| ! | TATGTTAAGTTCCCAAAATA+TGG | + | chr7_3:42636320-42636339 | Msa1104820:intron | 25.0% |
| !! | ACCAAACTTTACCATATTTT+GGG | - | chr7_3:42636334-42636353 | None:intergenic | 25.0% |
| !! | AACCAAACTTTACCATATTT+TGG | - | chr7_3:42636335-42636354 | None:intergenic | 25.0% |
| ! | TTCTTAAAATGTACTATTCG+TGG | + | chr7_3:42636398-42636417 | Msa1104820:intron | 25.0% |
| ! | ATAAGACAAAGTTCAAAACA+AGG | - | chr7_3:42636433-42636452 | None:intergenic | 25.0% |
| ! | ACATAGCCAAAAATACTTAT+TGG | + | chr7_3:42636496-42636515 | Msa1104820:intron | 25.0% |
| !!! | TGTCCAATTTTGTTTTTACA+TGG | + | chr7_3:42636898-42636917 | Msa1104820:intron | 25.0% |
| !! | CTAGAGTTTCATTTTCAATT+TGG | + | chr7_3:42637370-42637389 | Msa1104820:intron | 25.0% |
| !!! | GAATAGTACATTTTAGGAAA+TGG | + | chr7_3:42637543-42637562 | Msa1104820:intron | 25.0% |
| !! | AGAATATTTTCAGAACAGAA+TGG | + | chr7_3:42637858-42637877 | Msa1104820:intron | 25.0% |
| ! | GTTAATGAAGTTGTAAGATA+AGG | - | chr7_3:42637980-42637999 | None:intergenic | 25.0% |
| ! | TTTCAAAGTATAATTAGTGC+AGG | - | chr7_3:42638054-42638073 | None:intergenic | 25.0% |
| !! | CTTTTGCTTATATTTCATTC+CGG | - | chr7_3:42638526-42638545 | None:intergenic | 25.0% |
| ! | GAATGAAATATAAGCAAAAG+TGG | + | chr7_3:42638526-42638545 | Msa1104820:intron | 25.0% |
| ! | GGAATGAAATATAAGCAAAA+AGG | - | chr7_3:42638525-42638544 | None:intergenic | 25.0% |
| !!! | TGAGTTTGCTTCTTAATTTT+AGG | + | chr7_3:42638671-42638690 | Msa1104820:intron | 25.0% |
| ! | ATTAACGAAGTTTATGCATT+AGG | - | chr7_3:42638807-42638826 | None:intergenic | 25.0% |
| ! | AATACCATATGATATGAGAT+AGG | - | chr7_3:42639039-42639058 | None:intergenic | 25.0% |
| ! | TATCTCATATCATATGGTAT+TGG | + | chr7_3:42639038-42639057 | Msa1104820:intron | 25.0% |
| ! | ACAAACAAAGAATGAAATTC+TGG | - | chr7_3:42639119-42639138 | None:intergenic | 25.0% |
| ! | GAGTATCAAAAACAATATAC+TGG | - | chr7_3:42639262-42639281 | None:intergenic | 25.0% |
| !!! | ATATTGTTTTTGATACTCTG+CGG | + | chr7_3:42639264-42639283 | Msa1104820:three_prime_UTR | 25.0% |
| ! | ATATAAGTCAAGAGAAGTTT+AGG | - | chr7_3:42639306-42639325 | None:intergenic | 25.0% |
| ! | ACTTCTCTTGACTTATATAA+AGG | + | chr7_3:42639308-42639327 | Msa1104820:three_prime_UTR | 25.0% |
| ! | TATAAAGGATTTACTCTCAT+AGG | + | chr7_3:42639323-42639342 | Msa1104820:three_prime_UTR | 25.0% |
| ! | TAAAAAGAATGGGTATTACA+AGG | - | chr7_3:42639420-42639439 | None:intergenic | 25.0% |
| !! | TTGTAATACCCATTCTTTTT+AGG | + | chr7_3:42639419-42639438 | Msa1104820:three_prime_UTR | 25.0% |
| ! | ACATAATAATACCTATTGAG+AGG | - | chr7_3:42639534-42639553 | None:intergenic | 25.0% |
| ! | AATGTAGTAAGAAAACAATG+TGG | - | chr7_3:42639560-42639579 | None:intergenic | 25.0% |
| !! | TTTTTGCATATAAATGCTAC+TGG | - | chr7_3:42639630-42639649 | None:intergenic | 25.0% |
| !!! | AAAAAAAGGGAAACTTTTTC+AGG | + | chr7_3:42639645-42639664 | Msa1104820:three_prime_UTR | 25.0% |
| TGATAATTATCATGGGAATC+TGG | - | chr7_3:42631937-42631956 | None:intergenic | 30.0% | |
| GCATTGTGTGATAATTATCA+TGG | - | chr7_3:42631945-42631964 | None:intergenic | 30.0% | |
| ATAATTATCACACAATGCTG+AGG | + | chr7_3:42631947-42631966 | Msa1104820:CDS | 30.0% | |
| ! | ATATCATTGGTTATGCTGTT+TGG | + | chr7_3:42632041-42632060 | Msa1104820:intron | 30.0% |
| ATGGAGAATTAATCACACAA+AGG | + | chr7_3:42632114-42632133 | Msa1104820:intron | 30.0% | |
| ! | TGGTTTTCCCTTTACTTAAT+AGG | + | chr7_3:42632592-42632611 | Msa1104820:intron | 30.0% |
| ! | GGTTTTCCCTTTACTTAATA+GGG | + | chr7_3:42632593-42632612 | Msa1104820:intron | 30.0% |
| AAGCTTCCCTATTAAGTAAA+GGG | - | chr7_3:42632602-42632621 | None:intergenic | 30.0% | |
| ACTACAATAATTGATGTGCA+CGG | + | chr7_3:42633051-42633070 | Msa1104820:CDS | 30.0% | |
| TACAACATTTAGTTACCTCA+GGG | - | chr7_3:42633237-42633256 | None:intergenic | 30.0% | |
| CACTCAAATACATGTCAAAA+AGG | + | chr7_3:42633526-42633545 | Msa1104820:intron | 30.0% | |
| TCAAAAAGGAACCTGAATTA+GGG | + | chr7_3:42633540-42633559 | Msa1104820:intron | 30.0% | |
| ATGATTTCTATCCCTAATTC+AGG | - | chr7_3:42633554-42633573 | None:intergenic | 30.0% | |
| TGCAAAATGAAAGTTGCATT+TGG | + | chr7_3:42633594-42633613 | Msa1104820:intron | 30.0% | |
| !! | GCTTTGATTTGACTTTAGAA+AGG | + | chr7_3:42633791-42633810 | Msa1104820:intron | 30.0% |
| ATGATGTCATACTTTCGAAA+TGG | - | chr7_3:42634082-42634101 | None:intergenic | 30.0% | |
| GATAGAATTCAAACAAATGC+AGG | - | chr7_3:42634118-42634137 | None:intergenic | 30.0% | |
| AGGTATAGAGAGTAGAAAAA+AGG | + | chr7_3:42634563-42634582 | Msa1104820:intron | 30.0% | |
| TTTCCAAATACTCACTTGTT+GGG | + | chr7_3:42634629-42634648 | Msa1104820:intron | 30.0% | |
| AGAATGAAGAATATGTTGGA+TGG | + | chr7_3:42634729-42634748 | Msa1104820:intron | 30.0% | |
| AAGAGGATTAACAGTAGAAT+TGG | - | chr7_3:42634846-42634865 | None:intergenic | 30.0% | |
| !! | GCATATGTCAGTGTTTTATT+TGG | - | chr7_3:42635020-42635039 | None:intergenic | 30.0% |
| ! | TGTAAATATAGGAAGCGTAA+TGG | + | chr7_3:42635082-42635101 | Msa1104820:intron | 30.0% |
| ! | TAGTTGTTGTTGTATGAAGT+GGG | - | chr7_3:42635187-42635206 | None:intergenic | 30.0% |
| ! | TTAGTTGTTGTTGTATGAAG+TGG | - | chr7_3:42635188-42635207 | None:intergenic | 30.0% |
| !! | ACAAAGGTACCATAATGTAA+GGG | + | chr7_3:42635285-42635304 | Msa1104820:intron | 30.0% |
| ! | ATTTGTAGTGTGTGTGATTT+TGG | - | chr7_3:42635399-42635418 | None:intergenic | 30.0% |
| TTGTCATGAAAATATTGGTC+GGG | + | chr7_3:42635568-42635587 | Msa1104820:intron | 30.0% | |
| CATATTTCCATCAACCTTTA+TGG | - | chr7_3:42635753-42635772 | None:intergenic | 30.0% | |
| ! | TGGAAAGAACGAAAAAGTTT+TGG | + | chr7_3:42635810-42635829 | Msa1104820:intron | 30.0% |
| ATAAATAAAACTGGTGTACG+GGG | + | chr7_3:42635909-42635928 | Msa1104820:intron | 30.0% | |
| AACAATAATGCCAAAGAAGT+TGG | + | chr7_3:42636207-42636226 | Msa1104820:CDS | 30.0% | |
| TCCCAAAATATGGTAAAGTT+TGG | + | chr7_3:42636330-42636349 | Msa1104820:intron | 30.0% | |
| ! | GTAGGATTTCGTTTTCAATT+GGG | - | chr7_3:42636580-42636599 | None:intergenic | 30.0% |
| ! | AGTAGGATTTCGTTTTCAAT+TGG | - | chr7_3:42636581-42636600 | None:intergenic | 30.0% |
| TGAGAATATTGATCCAATGA+AGG | - | chr7_3:42636703-42636722 | None:intergenic | 30.0% | |
| TTAGAAAGAATATGAGCTTG+AGG | - | chr7_3:42636769-42636788 | None:intergenic | 30.0% | |
| CCTCCATGTAAAAACAAAAT+TGG | - | chr7_3:42636904-42636923 | None:intergenic | 30.0% | |
| !!! | CCAATTTTGTTTTTACATGG+AGG | + | chr7_3:42636901-42636920 | Msa1104820:intron | 30.0% |
| TTTAATCCCATTATTCGTCT+TGG | + | chr7_3:42636962-42636981 | Msa1104820:intron | 30.0% | |
| AACAAACCAAGACGAATAAT+GGG | - | chr7_3:42636971-42636990 | None:intergenic | 30.0% | |
| AAACAAACCAAGACGAATAA+TGG | - | chr7_3:42636972-42636991 | None:intergenic | 30.0% | |
| TTTGTCCTCATCTTTCTTAA+TGG | + | chr7_3:42637001-42637020 | Msa1104820:intron | 30.0% | |
| ! | TATTATTTTCCCAAGTGTAC+AGG | + | chr7_3:42637457-42637476 | Msa1104820:intron | 30.0% |
| GCATCATCTGATAAGTAAAA+GGG | - | chr7_3:42637644-42637663 | None:intergenic | 30.0% | |
| AGCATCATCTGATAAGTAAA+AGG | - | chr7_3:42637645-42637664 | None:intergenic | 30.0% | |
| TCAGAACAGAATGGAAATTA+TGG | + | chr7_3:42637867-42637886 | Msa1104820:intron | 30.0% | |
| GGAATTCTTGTAACTAGATA+AGG | - | chr7_3:42638027-42638046 | None:intergenic | 30.0% | |
| AGTATAATTAGTGCAGGATA+TGG | - | chr7_3:42638048-42638067 | None:intergenic | 30.0% | |
| ! | ACATAGGAAATTAGCTTCTT+TGG | - | chr7_3:42638123-42638142 | None:intergenic | 30.0% |
| !!! | AGCACTTGGAAATTTTTTTG+TGG | + | chr7_3:42638203-42638222 | Msa1104820:intron | 30.0% |
| !! | AAATTGGCTCTTTTATATCC+GGG | - | chr7_3:42638308-42638327 | None:intergenic | 30.0% |
| !! | CAAATTGGCTCTTTTATATC+CGG | - | chr7_3:42638309-42638328 | None:intergenic | 30.0% |
| !! | AATTTGACTTGCAAAAGACA+AGG | + | chr7_3:42638445-42638464 | Msa1104820:intron | 30.0% |
| TGAAATATAAGCAAAAGTGG+TGG | + | chr7_3:42638529-42638548 | Msa1104820:intron | 30.0% | |
| ! | TATGCATTAGGTTTTCAAAC+TGG | - | chr7_3:42638795-42638814 | None:intergenic | 30.0% |
| ATGTCCTATCTCATATCATA+TGG | + | chr7_3:42639032-42639051 | Msa1104820:intron | 30.0% | |
| ACAAAGAATGAAATTCTGGT+AGG | - | chr7_3:42639115-42639134 | None:intergenic | 30.0% | |
| !! | GGGGCATATTTACTATTTTT+AGG | - | chr7_3:42639194-42639213 | None:intergenic | 30.0% |
| AAAAATAGTAAATATGCCCC+TGG | + | chr7_3:42639194-42639213 | Msa1104820:exon | 30.0% | |
| ! | TGCAAACTGATGATGTAAAT+AGG | - | chr7_3:42639232-42639251 | None:intergenic | 30.0% |
| TCCTCAAACCTAAAAAGAAT+GGG | - | chr7_3:42639430-42639449 | None:intergenic | 30.0% | |
| TTCCTCAAACCTAAAAAGAA+TGG | - | chr7_3:42639431-42639450 | None:intergenic | 30.0% | |
| !!! | TTGAGTAGCATTTTTTGTAC+AGG | - | chr7_3:42639584-42639603 | None:intergenic | 30.0% |
| AGCTGTGAATTCATTTAGAC+TGG | + | chr7_3:42631888-42631907 | Msa1104820:CDS | 35.0% | |
| ! | TTTTCCAGAAACTTCTGTCA+AGG | + | chr7_3:42632328-42632347 | Msa1104820:intron | 35.0% |
| TTAATGCTACAGGTTTCTGA+AGG | + | chr7_3:42632462-42632481 | Msa1104820:intron | 35.0% | |
| ! | AGGTAAAGTTTGGTAGTAGT+TGG | + | chr7_3:42632572-42632591 | Msa1104820:intron | 35.0% |
| CAAGCTTCCCTATTAAGTAA+AGG | - | chr7_3:42632603-42632622 | None:intergenic | 35.0% | |
| TCACTACAACTACTTGCTTT+GGG | - | chr7_3:42632689-42632708 | None:intergenic | 35.0% | |
| AAAGCAAGTAGTTGTAGTGA+GGG | + | chr7_3:42632689-42632708 | Msa1104820:intron | 35.0% | |
| CGTATATAAGGAGTTTGAAG+AGG | + | chr7_3:42632816-42632835 | Msa1104820:CDS | 35.0% | |
| GTGACATTCATCAACTTGAT+AGG | - | chr7_3:42632925-42632944 | None:intergenic | 35.0% | |
| ATGCGCATGCAAAAAATTGA+TGG | + | chr7_3:42633202-42633221 | Msa1104820:CDS | 35.0% | |
| CTACAACATTTAGTTACCTC+AGG | - | chr7_3:42633238-42633257 | None:intergenic | 35.0% | |
| ACATGAACACTGAACTTAGT+AGG | - | chr7_3:42633440-42633459 | None:intergenic | 35.0% | |
| TTGTCATGCATATGTTGACA+TGG | + | chr7_3:42633486-42633505 | Msa1104820:intron | 35.0% | |
| TGTCATGCATATGTTGACAT+GGG | + | chr7_3:42633487-42633506 | Msa1104820:intron | 35.0% | |
| GTCAAAAAGGAACCTGAATT+AGG | + | chr7_3:42633539-42633558 | Msa1104820:intron | 35.0% | |
| ! | CAACTTTCATTTTGCAGCAA+GGG | - | chr7_3:42633590-42633609 | None:intergenic | 35.0% |
| ! | TGAACATCTGGTTTAATGTC+TGG | - | chr7_3:42633669-42633688 | None:intergenic | 35.0% |
| CTAGTATGGAATACAGCAAA+AGG | + | chr7_3:42633715-42633734 | Msa1104820:CDS | 35.0% | |
| !!! | ATTATTTTGGCTGTGGTCTT+CGG | - | chr7_3:42633751-42633770 | None:intergenic | 35.0% |
| AGAGTCTAAATGATTCATGC+TGG | + | chr7_3:42633821-42633840 | Msa1104820:intron | 35.0% | |
| ATGATTCATGCTGGATTTAC+AGG | + | chr7_3:42633830-42633849 | Msa1104820:intron | 35.0% | |
| ! | ATGCTGGATTTACAGGTTTT+GGG | + | chr7_3:42633837-42633856 | Msa1104820:intron | 35.0% |
| TGTTAGAGGTTATAGACTCA+TGG | + | chr7_3:42633880-42633899 | Msa1104820:intron | 35.0% | |
| GTCATACTTTCGAAATGGAA+GGG | - | chr7_3:42634077-42634096 | None:intergenic | 35.0% | |
| TGTCATACTTTCGAAATGGA+AGG | - | chr7_3:42634078-42634097 | None:intergenic | 35.0% | |
| AACAACTGTACATAGCACAA+GGG | - | chr7_3:42634173-42634192 | None:intergenic | 35.0% | |
| TAACAACTGTACATAGCACA+AGG | - | chr7_3:42634174-42634193 | None:intergenic | 35.0% | |
| GAAGAACTTCCAAATTTCGT+TGG | - | chr7_3:42634218-42634237 | None:intergenic | 35.0% | |
| AATTTATGAGTGACCATGCT+AGG | - | chr7_3:42634272-42634291 | None:intergenic | 35.0% | |
| TAGCATGGTCACTCATAAAT+TGG | + | chr7_3:42634271-42634290 | Msa1104820:CDS | 35.0% | |
| ! | ACTCATGACTATTTCTTCAC+AGG | + | chr7_3:42634380-42634399 | Msa1104820:intron | 35.0% |
| AACACTGAAATATCTGAACC+TGG | + | chr7_3:42634408-42634427 | Msa1104820:CDS | 35.0% | |
| ACTGATTGCATAAAGGTTGA+AGG | - | chr7_3:42634459-42634478 | None:intergenic | 35.0% | |
| AGAAGGAACTGATTGCATAA+AGG | - | chr7_3:42634466-42634485 | None:intergenic | 35.0% | |
| ATGTAGAAGTTATAGGGTTC+AGG | + | chr7_3:42634543-42634562 | Msa1104820:intron | 35.0% | |
| CTTTCCAAATACTCACTTGT+TGG | + | chr7_3:42634628-42634647 | Msa1104820:intron | 35.0% | |
| TTCTCTGGTGAAATTCATGT+GGG | - | chr7_3:42634713-42634732 | None:intergenic | 35.0% | |
| ATTCTCTGGTGAAATTCATG+TGG | - | chr7_3:42634714-42634733 | None:intergenic | 35.0% | |
| CCAACATATTCTTCATTCTC+TGG | - | chr7_3:42634728-42634747 | None:intergenic | 35.0% | |
| CCAGAGAATGAAGAATATGT+TGG | + | chr7_3:42634725-42634744 | Msa1104820:intron | 35.0% | |
| ATGAAGAATATGTTGGATGG+TGG | + | chr7_3:42634732-42634751 | Msa1104820:intron | 35.0% | |
| AAGTTACCTCTTACTCTCTT+CGG | - | chr7_3:42634907-42634926 | None:intergenic | 35.0% | |
| ACCATACAACTACAAGTGAA+CGG | - | chr7_3:42635136-42635155 | None:intergenic | 35.0% | |
| !! | CACAAAGGTACCATAATGTA+AGG | + | chr7_3:42635284-42635303 | Msa1104820:intron | 35.0% |
| !! | CAAAGGTACCATAATGTAAG+GGG | + | chr7_3:42635286-42635305 | Msa1104820:intron | 35.0% |
| CACACACACTACAAATTAGA+AGG | + | chr7_3:42635403-42635422 | Msa1104820:intron | 35.0% | |
| ATAGTTAGCGAAACACTTCA+TGG | + | chr7_3:42635513-42635532 | Msa1104820:intron | 35.0% | |
| TAGTTAGCGAAACACTTCAT+GGG | + | chr7_3:42635514-42635533 | Msa1104820:intron | 35.0% | |
| ATAAATTGGCAGGGAATTTG+AGG | + | chr7_3:42635697-42635716 | Msa1104820:intron | 35.0% | |
| TGAATTAAAGTGGCACCAAT+AGG | + | chr7_3:42635941-42635960 | Msa1104820:intron | 35.0% | |
| ACTGCAACTCATGTATGATA+TGG | + | chr7_3:42636126-42636145 | Msa1104820:intron | 35.0% | |
| CATTATTGTTTGCCTCAACT+AGG | - | chr7_3:42636197-42636216 | None:intergenic | 35.0% | |
| ATCAACATCACCAACTTCTT+TGG | - | chr7_3:42636220-42636239 | None:intergenic | 35.0% | |
| CTATGTGAACAAAACTAAGG+TGG | - | chr7_3:42636482-42636501 | None:intergenic | 35.0% | |
| TGGCTATGTGAACAAAACTA+AGG | - | chr7_3:42636485-42636504 | None:intergenic | 35.0% | |
| ! | GGCATTTTTAAACACATCTG+CGG | - | chr7_3:42636522-42636541 | None:intergenic | 35.0% |
| GGTATATTGCAGAAATGACT+TGG | - | chr7_3:42636559-42636578 | None:intergenic | 35.0% | |
| GAAAACAAACAAGGAAGAGT+AGG | - | chr7_3:42636598-42636617 | None:intergenic | 35.0% | |
| GGGTAATATTAGGATTCTGT+TGG | - | chr7_3:42636634-42636653 | None:intergenic | 35.0% | |
| ! | AAACTCTGACGGGTAATATT+AGG | - | chr7_3:42636644-42636663 | None:intergenic | 35.0% |
| ATATGAGCTTGAGGTTAAGA+GGG | - | chr7_3:42636760-42636779 | None:intergenic | 35.0% | |
| AATATGAGCTTGAGGTTAAG+AGG | - | chr7_3:42636761-42636780 | None:intergenic | 35.0% | |
| ! | GAAATTTTCTAAGCCAGGTT+GGG | - | chr7_3:42636832-42636851 | None:intergenic | 35.0% |
| CAAAATTGGACAGTTTCTGT+TGG | - | chr7_3:42636890-42636909 | None:intergenic | 35.0% | |
| ATACGAAATGGAGCTCATAA+GGG | - | chr7_3:42637039-42637058 | None:intergenic | 35.0% | |
| AATACGAAATGGAGCTCATA+AGG | - | chr7_3:42637040-42637059 | None:intergenic | 35.0% | |
| CGCATTGTAGAAATACGAAA+TGG | - | chr7_3:42637051-42637070 | None:intergenic | 35.0% | |
| CAATCTCATTGTAGCATTTG+CGG | - | chr7_3:42637081-42637100 | None:intergenic | 35.0% | |
| ! | CAATGAGATTGAGTGTTGTA+TGG | + | chr7_3:42637090-42637109 | Msa1104820:intron | 35.0% |
| TATATCATGACCGTGACATT+TGG | - | chr7_3:42637170-42637189 | None:intergenic | 35.0% | |
| AAATGTCACGGTCATGATAT+AGG | + | chr7_3:42637169-42637188 | Msa1104820:intron | 35.0% | |
| ACTTGGGAAAATAATATCCG+TGG | - | chr7_3:42637453-42637472 | None:intergenic | 35.0% | |
| ACTATTCATTGTTCTCGTTG+TGG | - | chr7_3:42637530-42637549 | None:intergenic | 35.0% | |
| TACGACTGTACTTCATATTC+TGG | + | chr7_3:42637599-42637618 | Msa1104820:intron | 35.0% | |
| ACGACTGTACTTCATATTCT+GGG | + | chr7_3:42637600-42637619 | Msa1104820:intron | 35.0% | |
| TCATGTGAAACATGTTCCTA+AGG | + | chr7_3:42637822-42637841 | Msa1104820:intron | 35.0% | |
| AACTTCCAAAGAAAAGTCTC+TGG | - | chr7_3:42637912-42637931 | None:intergenic | 35.0% | |
| ! | GAAGTTCAGTTTTTATGCTC+TGG | + | chr7_3:42637926-42637945 | Msa1104820:intron | 35.0% |
| GATAAGGAAACAAGTCAATG+TGG | - | chr7_3:42638011-42638030 | None:intergenic | 35.0% | |
| TGAAAAATGGTGCATCTGAT+AGG | + | chr7_3:42638069-42638088 | Msa1104820:intron | 35.0% | |
| AGAAGCTAATTTCCTATGTC+AGG | + | chr7_3:42638124-42638143 | Msa1104820:intron | 35.0% | |
| TATGTAGTATTTGCAGCACT+TGG | + | chr7_3:42638189-42638208 | Msa1104820:intron | 35.0% | |
| !! | AATTGGCTCTTTTATATCCG+GGG | - | chr7_3:42638307-42638326 | None:intergenic | 35.0% |
| CGGATATAAAAGAGCCAATT+TGG | + | chr7_3:42638307-42638326 | Msa1104820:CDS | 35.0% | |
| AAAGGGATCAACTTAATCAC+AGG | - | chr7_3:42638487-42638506 | None:intergenic | 35.0% | |
| !! | GATTAAGTTGATCCCTTTGA+AGG | + | chr7_3:42638489-42638508 | Msa1104820:intron | 35.0% |
| TGCTTATATTTCATTCCGGA+GGG | - | chr7_3:42638613-42638632 | None:intergenic | 35.0% | |
| TTGCTTATATTTCATTCCGG+AGG | - | chr7_3:42638612-42638631 | None:intergenic | 35.0% | |
| ! | GGACTTGAAAAGTATGTATG+TGG | - | chr7_3:42638589-42638608 | None:intergenic | 35.0% |
| TTGCTTATATTTCATTCCGG+AGG | + | chr7_3:42638612-42638631 | Msa1104820:intron | 35.0% | |
| TGCTTATATTTCATTCCGGA+GGG | + | chr7_3:42638613-42638632 | Msa1104820:intron | 35.0% | |
| TCTTTAAACAATACTCCCTC+CGG | - | chr7_3:42638631-42638650 | None:intergenic | 35.0% | |
| GAAATTCATAGAACTCCACT+TGG | + | chr7_3:42638888-42638907 | Msa1104820:intron | 35.0% | |
| ATAGGTATACTCATCTTCCA+GGG | - | chr7_3:42639214-42639233 | None:intergenic | 35.0% | |
| AATAGGTATACTCATCTTCC+AGG | - | chr7_3:42639215-42639234 | None:intergenic | 35.0% | |
| TACTTCTGTGATATATCCAC+AGG | + | chr7_3:42639352-42639371 | Msa1104820:three_prime_UTR | 35.0% | |
| !!! | ACCCATTCTTTTTAGGTTTG+AGG | + | chr7_3:42639426-42639445 | Msa1104820:three_prime_UTR | 35.0% |
| TAGGTTTGAGGAATGAGATA+TGG | + | chr7_3:42639438-42639457 | Msa1104820:three_prime_UTR | 35.0% | |
| AGGTTTGAGGAATGAGATAT+GGG | + | chr7_3:42639439-42639458 | Msa1104820:three_prime_UTR | 35.0% | |
| ! | GCAGCAAGAAGTTTTTATGA+GGG | + | chr7_3:42639489-42639508 | Msa1104820:three_prime_UTR | 35.0% |
| ! | AGAAGTTTTTATGAGGGATC+TGG | + | chr7_3:42639495-42639514 | Msa1104820:three_prime_UTR | 35.0% |
| TCTGAGTTATTCCTCTCAAT+AGG | + | chr7_3:42639520-42639539 | Msa1104820:three_prime_UTR | 35.0% | |
| AGATGAGAGGAGTAGAAGTT+TGG | + | chr7_3:42631690-42631709 | Msa1104820:five_prime_UTR | 40.0% | |
| CAAGACTCACTTATAGTCTC+AGG | + | chr7_3:42631788-42631807 | Msa1104820:CDS | 40.0% | |
| ! | GTCTCAGGAAGCGTAATAAA+CGG | + | chr7_3:42631803-42631822 | Msa1104820:intron | 40.0% |
| ! | TCTCAGGAAGCGTAATAAAC+GGG | + | chr7_3:42631804-42631823 | Msa1104820:intron | 40.0% |
| ATTCACAGCTTCTTCCTCTT+TGG | - | chr7_3:42631878-42631897 | None:intergenic | 40.0% | |
| TGCAACTTGAAGCACATTTC+TGG | + | chr7_3:42632137-42632156 | Msa1104820:intron | 40.0% | |
| TTCTCCTTGACAGAAGTTTC+TGG | - | chr7_3:42632335-42632354 | None:intergenic | 40.0% | |
| TTGATAAAACGGTCCAGATG+TGG | + | chr7_3:42632500-42632519 | Msa1104820:CDS | 40.0% | |
| TGATAAAACGGTCCAGATGT+GGG | + | chr7_3:42632501-42632520 | Msa1104820:CDS | 40.0% | |
| AGATATGCTCCATTGGAGAA+AGG | + | chr7_3:42632525-42632544 | Msa1104820:CDS | 40.0% | |
| ! | TGGAGCAGACTCTATTTTAC+AGG | + | chr7_3:42632552-42632571 | Msa1104820:CDS | 40.0% |
| CTCACTACAACTACTTGCTT+TGG | - | chr7_3:42632690-42632709 | None:intergenic | 40.0% | |
| CAAAGCAAGTAGTTGTAGTG+AGG | + | chr7_3:42632688-42632707 | Msa1104820:intron | 40.0% | |
| GTAGTGAGGGAAAATCTAAC+AGG | + | chr7_3:42632702-42632721 | Msa1104820:intron | 40.0% | |
| TATTACCCTCATGGTATGCA+TGG | + | chr7_3:42632847-42632866 | Msa1104820:CDS | 40.0% | |
| CCAAGTCTCTCAATATACAC+TGG | - | chr7_3:42632892-42632911 | None:intergenic | 40.0% | |
| CCAGTGTATATTGAGAGACT+TGG | + | chr7_3:42632889-42632908 | Msa1104820:CDS | 40.0% | |
| TTGCTGCTATAGAACATGCA+GGG | - | chr7_3:42633011-42633030 | None:intergenic | 40.0% | |
| TTTGCTGCTATAGAACATGC+AGG | - | chr7_3:42633012-42633031 | None:intergenic | 40.0% | |
| CATGTTCTATAGCAGCAAAG+CGG | + | chr7_3:42633013-42633032 | Msa1104820:CDS | 40.0% | |
| ! | TGATGGTGATAATTACCCTG+AGG | + | chr7_3:42633219-42633238 | Msa1104820:CDS | 40.0% |
| ! | GCAACTTTCATTTTGCAGCA+AGG | - | chr7_3:42633591-42633610 | None:intergenic | 40.0% |
| !! | CAGCATTGACAATGAACATC+TGG | - | chr7_3:42633681-42633700 | None:intergenic | 40.0% |
| CAGATGTTCATTGTCAATGC+TGG | + | chr7_3:42633679-42633698 | Msa1104820:CDS | 40.0% | |
| TTCATTGTCAATGCTGGTAG+TGG | + | chr7_3:42633685-42633704 | Msa1104820:CDS | 40.0% | |
| TCATTGTCAATGCTGGTAGT+GGG | + | chr7_3:42633686-42633705 | Msa1104820:CDS | 40.0% | |
| ! | CATGCTGGATTTACAGGTTT+TGG | + | chr7_3:42633836-42633855 | Msa1104820:intron | 40.0% |
| TAACCTCTAACAATCTGCTC+TGG | - | chr7_3:42633872-42633891 | None:intergenic | 40.0% | |
| ! | AGCCAACTTCCTGATTTTCT+GGG | + | chr7_3:42633988-42634007 | Msa1104820:intron | 40.0% |
| AGTTGTTCATGCCCAAATGA+TGG | + | chr7_3:42634015-42634034 | Msa1104820:CDS | 40.0% | |
| CAAGACATCCTCCATCATTT+GGG | - | chr7_3:42634029-42634048 | None:intergenic | 40.0% | |
| AGGATGTCTTGGATCTAACA+AGG | + | chr7_3:42634038-42634057 | Msa1104820:CDS | 40.0% | |
| GGATGTCTTGGATCTAACAA+GGG | + | chr7_3:42634039-42634058 | Msa1104820:CDS | 40.0% | |
| GCAACAAAGCCAACGAAATT+TGG | + | chr7_3:42634206-42634225 | Msa1104820:CDS | 40.0% | |
| TCTCCCAACAAGTGAGTATT+TGG | - | chr7_3:42634635-42634654 | None:intergenic | 40.0% | |
| CTTGTTGGGAGAAGTTTATG+TGG | + | chr7_3:42634643-42634662 | Msa1104820:intron | 40.0% | |
| ! | GTAGTTTGTCCCACCAAATA+GGG | - | chr7_3:42634677-42634696 | None:intergenic | 40.0% |
| GGACAAACTACCATATTCGT+GGG | + | chr7_3:42634686-42634705 | Msa1104820:intron | 40.0% | |
| ! | AAGAATATGTTGGATGGTGG+TGG | + | chr7_3:42634735-42634754 | Msa1104820:intron | 40.0% |
| ATCAATCCGAAGAGAGTAAG+AGG | + | chr7_3:42634898-42634917 | Msa1104820:intron | 40.0% | |
| GTAATGGTTGTGATCATGAG+CGG | + | chr7_3:42635098-42635117 | Msa1104820:intron | 40.0% | |
| ACCGTTCACTTGTAGTTGTA+TGG | + | chr7_3:42635132-42635151 | Msa1104820:intron | 40.0% | |
| AGTGGGTATATGTATATGCG+AGG | - | chr7_3:42635170-42635189 | None:intergenic | 40.0% | |
| TACACACACCCCTTACATTA+TGG | - | chr7_3:42635297-42635316 | None:intergenic | 40.0% | |
| ! | CAGACTTTAGCTAGTGTTGA+TGG | - | chr7_3:42635542-42635561 | None:intergenic | 40.0% |
| !!! | AGGGAATTTGAGGCCTTTTT+TGG | + | chr7_3:42635707-42635726 | Msa1104820:intron | 40.0% |
| CTCAACACCTTGAGATTACA+AGG | + | chr7_3:42635995-42636014 | Msa1104820:intron | 40.0% | |
| AAGTTCAAAACAAGGAGCAG+TGG | - | chr7_3:42636425-42636444 | None:intergenic | 40.0% | |
| ! | CTGCGGCCAATAAGTATTTT+TGG | - | chr7_3:42636505-42636524 | None:intergenic | 40.0% |
| ! | ATTGCAGAAATGACTTGGAC+TGG | - | chr7_3:42636554-42636573 | None:intergenic | 40.0% |
| ACGAGGAAGGAAAACAAACA+AGG | - | chr7_3:42636607-42636626 | None:intergenic | 40.0% | |
| ! | GGAAATTTTCTAAGCCAGGT+TGG | - | chr7_3:42636833-42636852 | None:intergenic | 40.0% |
| ATTGGACAGTTTCTGTTGGT+CGG | - | chr7_3:42636886-42636905 | None:intergenic | 40.0% | |
| !! | AGGTTGGTTCTAATACCAGA+AGG | + | chr7_3:42636933-42636952 | Msa1104820:intron | 40.0% |
| !! | TTGGTTCTAATACCAGAAGG+TGG | + | chr7_3:42636936-42636955 | Msa1104820:intron | 40.0% |
| !! | TGGTTCTAATACCAGAAGGT+GGG | + | chr7_3:42636937-42636956 | Msa1104820:intron | 40.0% |
| CAGAGCCATTAAGAAAGATG+AGG | - | chr7_3:42637009-42637028 | None:intergenic | 40.0% | |
| GGTTCTCGAATAAAAGCGAT+CGG | - | chr7_3:42637140-42637159 | None:intergenic | 40.0% | |
| ! | GAAACGATGTGATGACGAAA+TGG | - | chr7_3:42637204-42637223 | None:intergenic | 40.0% |
| TCACATCGTTTCTTTCCTTC+TGG | + | chr7_3:42637212-42637231 | Msa1104820:intron | 40.0% | |
| CACATCGTTTCTTTCCTTCT+GGG | + | chr7_3:42637213-42637232 | Msa1104820:intron | 40.0% | |
| ACATCGTTTCTTTCCTTCTG+GGG | + | chr7_3:42637214-42637233 | Msa1104820:intron | 40.0% | |
| TTAGTGTCCTTTCCCAACAT+TGG | + | chr7_3:42637253-42637272 | Msa1104820:intron | 40.0% | |
| TTGTTCTCCAATGTTGGGAA+AGG | - | chr7_3:42637263-42637282 | None:intergenic | 40.0% | |
| ! | ACAAAGACTGGTCAAAGCTT+AGG | - | chr7_3:42637312-42637331 | None:intergenic | 40.0% |
| GGTAAATTGGGGAAATGATG+TGG | + | chr7_3:42637391-42637410 | Msa1104820:intron | 40.0% | |
| GGGAAAATAATATCCGTGGA+CGG | - | chr7_3:42637449-42637468 | None:intergenic | 40.0% | |
| TGAAGTACAGTCGTAATCTC+TGG | - | chr7_3:42637594-42637613 | None:intergenic | 40.0% | |
| CGACTGTACTTCATATTCTG+GGG | + | chr7_3:42637601-42637620 | Msa1104820:intron | 40.0% | |
| GACTGTACTTCATATTCTGG+GGG | + | chr7_3:42637602-42637621 | Msa1104820:intron | 40.0% | |
| TGTAAGCAAAGATGGCTATG+AGG | - | chr7_3:42637712-42637731 | None:intergenic | 40.0% | |
| TCGAGTCATGTAAGCAAAGA+TGG | - | chr7_3:42637720-42637739 | None:intergenic | 40.0% | |
| !! | TCACATGACTTGGTTAAGAC+TGG | - | chr7_3:42637810-42637829 | None:intergenic | 40.0% |
| GGAACATGTTTCACATGACT+TGG | - | chr7_3:42637820-42637839 | None:intergenic | 40.0% | |
| AAAATGGTGCATCTGATAGG+TGG | + | chr7_3:42638072-42638091 | Msa1104820:intron | 40.0% | |
| ! | TTCCTATGTCAGGAGTACAT+TGG | + | chr7_3:42638134-42638153 | Msa1104820:intron | 40.0% |
| ATCCAATGTACTCCTGACAT+AGG | - | chr7_3:42638139-42638158 | None:intergenic | 40.0% | |
| ! | TTTTCTGATGGCTTCTTGGT+TGG | - | chr7_3:42638245-42638264 | None:intergenic | 40.0% |
| ! | TGGATTTTCTGATGGCTTCT+TGG | - | chr7_3:42638249-42638268 | None:intergenic | 40.0% |
| GGTTAATTGATTGAGAGAGC+TGG | - | chr7_3:42638283-42638302 | None:intergenic | 40.0% | |
| TCTCAATCAATTAACCACCC+CGG | + | chr7_3:42638287-42638306 | Msa1104820:CDS | 40.0% | |
| TAAAAGAGCCAATTTGGCAG+AGG | + | chr7_3:42638313-42638332 | Msa1104820:CDS | 40.0% | |
| TTCTCACGAGGAATTGTTCT+CGG | - | chr7_3:42638381-42638400 | None:intergenic | 40.0% | |
| AACAATTCCTCGTGAGAAAG+AGG | + | chr7_3:42638383-42638402 | Msa1104820:CDS | 40.0% | |
| AGAATATCCTCTTTCTCACG+AGG | - | chr7_3:42638393-42638412 | None:intergenic | 40.0% | |
| GAGTCGTTGAGTCGTATAAA+AGG | + | chr7_3:42638417-42638436 | Msa1104820:intron | 40.0% | |
| ! | TGACTTGCAAAAGACAAGGA+AGG | + | chr7_3:42638449-42638468 | Msa1104820:intron | 40.0% |
| TCAACTTAATCACAGGAGAC+TGG | - | chr7_3:42638480-42638499 | None:intergenic | 40.0% | |
| ! | GTTTTCAAACTGGAGATGAG+AGG | - | chr7_3:42638785-42638804 | None:intergenic | 40.0% |
| ! | TAAAGGTATGCACTATGCAC+TGG | - | chr7_3:42638853-42638872 | None:intergenic | 40.0% |
| TACAGGGGACAAAATCATGT+TGG | + | chr7_3:42639168-42639187 | Msa1104820:intron | 40.0% | |
| TAGGTATACTCATCTTCCAG+GGG | - | chr7_3:42639213-42639232 | None:intergenic | 40.0% | |
| AGTCAAGAGAAGTTTAGGTC+CGG | - | chr7_3:42639301-42639320 | None:intergenic | 40.0% | |
| ! | TGTGAGAGTACAAAATCCTG+TGG | - | chr7_3:42639371-42639390 | None:intergenic | 40.0% |
| AGGTACTTCCATTTCTTCCA+GGG | - | chr7_3:42639400-42639419 | None:intergenic | 40.0% | |
| ! | AAGGTACTTCCATTTCTTCC+AGG | - | chr7_3:42639401-42639420 | None:intergenic | 40.0% |
| GGTTTGAGGAATGAGATATG+GGG | + | chr7_3:42639440-42639459 | Msa1104820:three_prime_UTR | 40.0% | |
| TTGCTGCCTTGAATAGATTG+GGG | - | chr7_3:42639476-42639495 | None:intergenic | 40.0% | |
| CTTGCTGCCTTGAATAGATT+GGG | - | chr7_3:42639477-42639496 | None:intergenic | 40.0% | |
| TCTTGCTGCCTTGAATAGAT+TGG | - | chr7_3:42639478-42639497 | None:intergenic | 40.0% | |
| ! | GGCAGCAAGAAGTTTTTATG+AGG | + | chr7_3:42639488-42639507 | Msa1104820:three_prime_UTR | 40.0% |
| AGTCTCGAGCTAGATCTCTT+AGG | + | chr7_3:42631743-42631762 | Msa1104820:five_prime_UTR | 45.0% | |
| AGTATATTACAGGCTGCTGC+TGG | + | chr7_3:42632438-42632457 | Msa1104820:intron | 45.0% | |
| !! | TGCTGCTGGTTTAATGCTAC+AGG | + | chr7_3:42632452-42632471 | Msa1104820:intron | 45.0% |
| CTCCATTGGAGAAAGGAGTA+TGG | + | chr7_3:42632532-42632551 | Msa1104820:CDS | 45.0% | |
| CTCCATACTCCTTTCTCCAA+TGG | - | chr7_3:42632537-42632556 | None:intergenic | 45.0% | |
| ! | CTACAACTACTTGCTTTGGG+TGG | - | chr7_3:42632686-42632705 | None:intergenic | 45.0% |
| GTTCAGCGTTATTACCCTCA+TGG | + | chr7_3:42632838-42632857 | Msa1104820:CDS | 45.0% | |
| TATGCATGGTGTGGACAAAG+AGG | + | chr7_3:42632861-42632880 | Msa1104820:CDS | 45.0% | |
| ATGCATGGTGTGGACAAAGA+GGG | + | chr7_3:42632862-42632881 | Msa1104820:CDS | 45.0% | |
| AATAATTGATGTGCACGGCG+TGG | + | chr7_3:42633056-42633075 | Msa1104820:CDS | 45.0% | |
| CTTCGATTTCGACTGAGTGT+AGG | - | chr7_3:42633116-42633135 | None:intergenic | 45.0% | |
| !! | GTAGTGGGTTCAAGCTAGTA+TGG | + | chr7_3:42633701-42633720 | Msa1104820:CDS | 45.0% |
| GTTCCAGAGCAGATTGTTAG+AGG | + | chr7_3:42633866-42633885 | Msa1104820:intron | 45.0% | |
| CAGGAAGTTGGCTGTTCAAA+AGG | - | chr7_3:42633981-42634000 | None:intergenic | 45.0% | |
| ! | CAGCCAACTTCCTGATTTTC+TGG | + | chr7_3:42633987-42634006 | Msa1104820:intron | 45.0% |
| CACCCAGAAAATCAGGAAGT+TGG | - | chr7_3:42633993-42634012 | None:intergenic | 45.0% | |
| ! | CAACTTCCTGATTTTCTGGG+TGG | + | chr7_3:42633991-42634010 | Msa1104820:CDS | 45.0% |
| CAACTTCCACCCAGAAAATC+AGG | - | chr7_3:42634000-42634019 | None:intergenic | 45.0% | |
| TGTTCATGCCCAAATGATGG+AGG | + | chr7_3:42634018-42634037 | Msa1104820:CDS | 45.0% | |
| CCAAGACATCCTCCATCATT+TGG | - | chr7_3:42634030-42634049 | None:intergenic | 45.0% | |
| ! | CCAAATGATGGAGGATGTCT+TGG | + | chr7_3:42634027-42634046 | Msa1104820:CDS | 45.0% |
| TTGGATCTAACAAGGGACCT+TGG | + | chr7_3:42634046-42634065 | Msa1104820:CDS | 45.0% | |
| GAAATGGAAGGGTCATTCCA+AGG | - | chr7_3:42634066-42634085 | None:intergenic | 45.0% | |
| !! | CACAAGGGAGTATTAGCTGT+AGG | - | chr7_3:42634158-42634177 | None:intergenic | 45.0% |
| GACCATGCTAGGATATGACT+CGG | - | chr7_3:42634261-42634280 | None:intergenic | 45.0% | |
| TGTGGATCCCATTCCCTATT+TGG | + | chr7_3:42634661-42634680 | Msa1104820:intron | 45.0% | |
| GATCCCATTCCCTATTTGGT+GGG | + | chr7_3:42634665-42634684 | Msa1104820:intron | 45.0% | |
| TGTCCCACCAAATAGGGAAT+GGG | - | chr7_3:42634671-42634690 | None:intergenic | 45.0% | |
| TTGTCCCACCAAATAGGGAA+TGG | - | chr7_3:42634672-42634691 | None:intergenic | 45.0% | |
| ! | GGTAGTTTGTCCCACCAAAT+AGG | - | chr7_3:42634678-42634697 | None:intergenic | 45.0% |
| GGGACAAACTACCATATTCG+TGG | + | chr7_3:42634685-42634704 | Msa1104820:intron | 45.0% | |
| TGGTGTTCATGTTAGTGTCC+AGG | - | chr7_3:42635000-42635019 | None:intergenic | 45.0% | |
| TAAGCCGTATCCCACTAAGT+GGG | + | chr7_3:42635205-42635224 | Msa1104820:intron | 45.0% | |
| ! | AGTTGGTGTAGGGCCAAAAA+AGG | - | chr7_3:42635723-42635742 | None:intergenic | 45.0% |
| ! | TTTTGGCCCTACACCAACTT+CGG | + | chr7_3:42635724-42635743 | Msa1104820:intron | 45.0% |
| ACCAACTTCGGCTTCCATAA+AGG | + | chr7_3:42635736-42635755 | Msa1104820:intron | 45.0% | |
| ACCTTTATGGAAGCCGAAGT+TGG | - | chr7_3:42635740-42635759 | None:intergenic | 45.0% | |
| TCGGCTTCCATAAAGGTTGA+TGG | + | chr7_3:42635743-42635762 | Msa1104820:intron | 45.0% | |
| GACAGTCGTAAAAGGCCTAT+TGG | - | chr7_3:42635959-42635978 | None:intergenic | 45.0% | |
| ! | CCTTTTACGACTGTCCTCAA+GGG | + | chr7_3:42635964-42635983 | Msa1104820:intron | 45.0% |
| ! | CTTTTACGACTGTCCTCAAG+GGG | + | chr7_3:42635965-42635984 | Msa1104820:intron | 45.0% |
| CACCTTGAGATTACAAGGCT+AGG | + | chr7_3:42636000-42636019 | Msa1104820:intron | 45.0% | |
| !! | AGCCTAGCCTTGTAATCTCA+AGG | - | chr7_3:42636005-42636024 | None:intergenic | 45.0% |
| ACATTTAGGTGCTAGCTCAG+TGG | - | chr7_3:42636032-42636051 | None:intergenic | 45.0% | |
| ACCTATCTGCAACCTAGTTG+AGG | + | chr7_3:42636182-42636201 | Msa1104820:CDS | 45.0% | |
| !! | AGAAATGACTTGGACTGGTG+AGG | - | chr7_3:42636549-42636568 | None:intergenic | 45.0% |
| TTCTGTTGGATTGACGAGGA+AGG | - | chr7_3:42636620-42636639 | None:intergenic | 45.0% | |
| AGGATTCTGTTGGATTGACG+AGG | - | chr7_3:42636624-42636643 | None:intergenic | 45.0% | |
| TCACCAGTTTGAGCCTTCAT+TGG | + | chr7_3:42636687-42636706 | Msa1104820:intron | 45.0% | |
| GATCCAATGAAGGCTCAAAC+TGG | - | chr7_3:42636693-42636712 | None:intergenic | 45.0% | |
| GACCTCCACAAGAAAAGGTT+CGG | - | chr7_3:42636857-42636876 | None:intergenic | 45.0% | |
| ! | GAACCTTTTCTTGTGGAGGT+CGG | + | chr7_3:42636856-42636875 | Msa1104820:intron | 45.0% |
| TTGGACAGTTTCTGTTGGTC+GGG | - | chr7_3:42636885-42636904 | None:intergenic | 45.0% | |
| !! | TTACATGGAGGCACTCTTTG+AGG | + | chr7_3:42636913-42636932 | Msa1104820:intron | 45.0% |
| ! | GGTTCTAATACCAGAAGGTG+GGG | + | chr7_3:42636938-42636957 | Msa1104820:intron | 45.0% |
| ATTGTAGCATTTGCGGAGAG+CGG | - | chr7_3:42637074-42637093 | None:intergenic | 45.0% | |
| ATCATGACCGTGACATTTGG+TGG | - | chr7_3:42637167-42637186 | None:intergenic | 45.0% | |
| CCGCATTGTTCTCCAATGTT+GGG | - | chr7_3:42637268-42637287 | None:intergenic | 45.0% | |
| CCCAACATTGGAGAACAATG+CGG | + | chr7_3:42637265-42637284 | Msa1104820:intron | 45.0% | |
| TCCGCATTGTTCTCCAATGT+TGG | - | chr7_3:42637269-42637288 | None:intergenic | 45.0% | |
| TCAAAGCTTAGGTGGGAACT+GGG | - | chr7_3:42637301-42637320 | None:intergenic | 45.0% | |
| ! | AGACTGGTCAAAGCTTAGGT+GGG | - | chr7_3:42637308-42637327 | None:intergenic | 45.0% |
| ! | AAGACTGGTCAAAGCTTAGG+TGG | - | chr7_3:42637309-42637328 | None:intergenic | 45.0% |
| CTCGTCGATCTAACAAAGAC+TGG | - | chr7_3:42637324-42637343 | None:intergenic | 45.0% | |
| CAGTCTTTGTTAGATCGACG+AGG | + | chr7_3:42637322-42637341 | Msa1104820:intron | 45.0% | |
| ATTGGGGAAATGATGTGGCT+TGG | + | chr7_3:42637396-42637415 | Msa1104820:intron | 45.0% | |
| TTTAAACGCATCACCGTCCA+CGG | + | chr7_3:42637433-42637452 | Msa1104820:intron | 45.0% | |
| ! | ACACTGAGCTGTTGATGAGA+TGG | + | chr7_3:42637501-42637520 | Msa1104820:intron | 45.0% |
| TTGCTTACATGACTCGAGTC+TGG | + | chr7_3:42637723-42637742 | Msa1104820:intron | 45.0% | |
| TCGAGTCTGGAGAAAGTGAA+AGG | + | chr7_3:42637736-42637755 | Msa1104820:intron | 45.0% | |
| AGTCTGGAGAAAGTGAAAGG+AGG | + | chr7_3:42637739-42637758 | Msa1104820:intron | 45.0% | |
| TCTGAAAATATGGCGGCCTT+AGG | - | chr7_3:42637841-42637860 | None:intergenic | 45.0% | |
| ! | CTGTGCCAGAGACTTTTCTT+TGG | + | chr7_3:42637904-42637923 | Msa1104820:intron | 45.0% |
| ! | ATGGCTTCTTGGTTGGTTGT+TGG | - | chr7_3:42638238-42638257 | None:intergenic | 45.0% |
| AAGCCATCAGAAAATCCAGC+CGG | + | chr7_3:42638251-42638270 | Msa1104820:CDS | 45.0% | |
| GAGGGACTATGTCCTTCAAA+GGG | - | chr7_3:42638504-42638523 | None:intergenic | 45.0% | |
| TTTGAAGGACATAGTCCCTC+CGG | + | chr7_3:42638504-42638523 | Msa1104820:intron | 45.0% | |
| GGTTGAGAAGTCAGTGTATG+TGG | + | chr7_3:42638550-42638569 | Msa1104820:intron | 45.0% | |
| TGTCAACCTTTCTGCAAAGC+TGG | + | chr7_3:42638976-42638995 | Msa1104820:intron | 45.0% | |
| ATGCAACCAGCTTTGCAGAA+AGG | - | chr7_3:42638985-42639004 | None:intergenic | 45.0% | |
| TGCTGCCTTGAATAGATTGG+GGG | - | chr7_3:42639475-42639494 | None:intergenic | 45.0% | |
| !!! | TTTCTTAAATTTTAATAAAT+TGG | + | chr7_3:42635683-42635702 | Msa1104820:intron | 5.0% |
| !! | TAAAAAAAAATAAATAAAAC+TGG | + | chr7_3:42635900-42635919 | Msa1104820:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTACTAA+AGG | + | chr7_3:42636285-42636304 | Msa1104820:intron | 5.0% |
| !!! | ATATATATTTTTTAAAGTTT+AGG | - | chr7_3:42636364-42636383 | None:intergenic | 5.0% |
| AGATGTTCGGGATGCCAAAG+AGG | + | chr7_3:42631861-42631880 | Msa1104820:CDS | 50.0% | |
| TGTGGGCAGATATGCTCCAT+TGG | + | chr7_3:42632518-42632537 | Msa1104820:CDS | 50.0% | |
| CCACACCATGCATACCATGA+GGG | - | chr7_3:42632855-42632874 | None:intergenic | 50.0% | |
| TCCACACCATGCATACCATG+AGG | - | chr7_3:42632856-42632875 | None:intergenic | 50.0% | |
| TGCATGGTGTGGACAAAGAG+GGG | + | chr7_3:42632863-42632882 | Msa1104820:CDS | 50.0% | |
| CACCGAGTCATATCCTAGCA+TGG | + | chr7_3:42634256-42634275 | Msa1104820:CDS | 50.0% | |
| CACGAATATGACTCGCGAAC+TGG | - | chr7_3:42634335-42634354 | None:intergenic | 50.0% | |
| GTTGCTTCTGACGTTGATCC+AGG | - | chr7_3:42634429-42634448 | None:intergenic | 50.0% | |
| CAGCTCACATTCTCGCTAGA+AGG | - | chr7_3:42634483-42634502 | None:intergenic | 50.0% | |
| GGATCCCATTCCCTATTTGG+TGG | + | chr7_3:42634664-42634683 | Msa1104820:intron | 50.0% | |
| TCATGTGGGTCCCACGAATA+TGG | - | chr7_3:42634699-42634718 | None:intergenic | 50.0% | |
| !! | ATGTTGGATGGTGGTGGTGT+TGG | + | chr7_3:42634741-42634760 | Msa1104820:intron | 50.0% |
| CTAAGCCGTATCCCACTAAG+TGG | + | chr7_3:42635204-42635223 | Msa1104820:intron | 50.0% | |
| AAGCCGTATCCCACTAAGTG+GGG | + | chr7_3:42635206-42635225 | Msa1104820:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+CGG | - | chr7_3:42635212-42635231 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | - | chr7_3:42635218-42635237 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | - | chr7_3:42635219-42635238 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | + | chr7_3:42635218-42635237 | Msa1104820:intron | 50.0% | |
| !! | TGGAAGCCGAAGTTGGTGTA+GGG | - | chr7_3:42635733-42635752 | None:intergenic | 50.0% |
| !! | ATGGAAGCCGAAGTTGGTGT+AGG | - | chr7_3:42635734-42635753 | None:intergenic | 50.0% |
| ! | GCCTTTTACGACTGTCCTCA+AGG | + | chr7_3:42635963-42635982 | Msa1104820:intron | 50.0% |
| CCCTTGAGGACAGTCGTAAA+AGG | - | chr7_3:42635967-42635986 | None:intergenic | 50.0% | |
| CTAGGTTGCAGATAGGTGCA+CGG | - | chr7_3:42636179-42636198 | None:intergenic | 50.0% | |
| GCCTCAACTAGGTTGCAGAT+AGG | - | chr7_3:42636186-42636205 | None:intergenic | 50.0% | |
| !! | AATGACTTGGACTGGTGAGG+TGG | - | chr7_3:42636546-42636565 | None:intergenic | 50.0% |
| GGTGATGTTAACACCCAACC+TGG | + | chr7_3:42636816-42636835 | Msa1104820:intron | 50.0% | |
| ! | CGGCGGAAATTTTCTAAGCC+AGG | - | chr7_3:42636837-42636856 | None:intergenic | 50.0% |
| ! | TTCCGCCGAACCTTTTCTTG+TGG | + | chr7_3:42636849-42636868 | Msa1104820:intron | 50.0% |
| CTCCACAAGAAAAGGTTCGG+CGG | - | chr7_3:42636854-42636873 | None:intergenic | 50.0% | |
| AGTCCGACCTCCACAAGAAA+AGG | - | chr7_3:42636862-42636881 | None:intergenic | 50.0% | |
| !! | ATGGAGGCACTCTTTGAGGT+TGG | + | chr7_3:42636917-42636936 | Msa1104820:intron | 50.0% |
| GGGATTAAAACCCCACCTTC+TGG | - | chr7_3:42636951-42636970 | None:intergenic | 50.0% | |
| CGAAATGGAGCTCATAAGGG+AGG | - | chr7_3:42637036-42637055 | None:intergenic | 50.0% | |
| ! | GAGTGTTGTATGGCAACCCA+TGG | + | chr7_3:42637100-42637119 | Msa1104820:intron | 50.0% |
| GTTGTATGGCAACCCATGGT+TGG | + | chr7_3:42637104-42637123 | Msa1104820:intron | 50.0% | |
| GGCAACCCATGGTTGGAAAA+AGG | + | chr7_3:42637111-42637130 | Msa1104820:intron | 50.0% | |
| ! | GGCGTCCTTTTTCCAACCAT+GGG | - | chr7_3:42637119-42637138 | None:intergenic | 50.0% |
| ACCTGCTCCACCAAATGTCA+CGG | + | chr7_3:42637157-42637176 | Msa1104820:intron | 50.0% | |
| ! | CGATGTGATGACGAAATGGC+TGG | - | chr7_3:42637200-42637219 | None:intergenic | 50.0% |
| ! | TCTTTCCTTCTGGGGAGACA+AGG | + | chr7_3:42637222-42637241 | Msa1104820:intron | 50.0% |
| TCAAACCTTGTCTCCCCAGA+AGG | - | chr7_3:42637230-42637249 | None:intergenic | 50.0% | |
| GTCAAAGCTTAGGTGGGAAC+TGG | - | chr7_3:42637302-42637321 | None:intergenic | 50.0% | |
| !! | GGAAATGATGTGGCTTGGTG+CGG | + | chr7_3:42637401-42637420 | Msa1104820:intron | 50.0% |
| TTCCCAAGTGTACAGGTCAG+AGG | + | chr7_3:42637464-42637483 | Msa1104820:intron | 50.0% | |
| CACCTCTGACCTGTACACTT+GGG | - | chr7_3:42637469-42637488 | None:intergenic | 50.0% | |
| ACACCTCTGACCTGTACACT+TGG | - | chr7_3:42637470-42637489 | None:intergenic | 50.0% | |
| ! | TGGCTCTTTTATATCCGGGG+TGG | - | chr7_3:42638304-42638323 | None:intergenic | 50.0% |
| AGCCAATTTGGCAGAGGTTG+CGG | + | chr7_3:42638319-42638338 | Msa1104820:CDS | 50.0% | |
| GGAGGGACTATGTCCTTCAA+AGG | - | chr7_3:42638505-42638524 | None:intergenic | 50.0% | |
| CTCTGCGGCTGAATTACTAC+CGG | + | chr7_3:42639279-42639298 | Msa1104820:three_prime_UTR | 50.0% | |
| CACACACACCCTGGAAGAAA+TGG | + | chr7_3:42639389-42639408 | Msa1104820:three_prime_UTR | 50.0% | |
| GACAGCCCCCAATCTATTCA+AGG | + | chr7_3:42639467-42639486 | Msa1104820:three_prime_UTR | 50.0% | |
| ! | TTTGGAGCCTGAAACCTCCG+AGG | + | chr7_3:42631708-42631727 | Msa1104820:five_prime_UTR | 55.0% |
| CACTCATCCTCGGAGGTTTC+AGG | - | chr7_3:42631718-42631737 | None:intergenic | 55.0% | |
| CTGAAACCTCCGAGGATGAG+TGG | + | chr7_3:42631716-42631735 | Msa1104820:five_prime_UTR | 55.0% | |
| AAACCTCCGAGGATGAGTGG+CGG | + | chr7_3:42631719-42631738 | Msa1104820:five_prime_UTR | 55.0% | |
| AGACTTCCGCCACTCATCCT+CGG | - | chr7_3:42631728-42631747 | None:intergenic | 55.0% | |
| GGAGCATATCTGCCCACATC+TGG | - | chr7_3:42632516-42632535 | None:intergenic | 55.0% | |
| CCCTCATGGTATGCATGGTG+TGG | + | chr7_3:42632852-42632871 | Msa1104820:CDS | 55.0% | |
| ATGGTGTGGACAAAGAGGGG+CGG | + | chr7_3:42632866-42632885 | Msa1104820:CDS | 55.0% | |
| GTTGAGTTCGAGTCCCCTTG+AGG | - | chr7_3:42635981-42636000 | None:intergenic | 55.0% | |
| TTACCCGTCAGAGTTTGCGC+AGG | + | chr7_3:42636648-42636667 | Msa1104820:intron | 55.0% | |
| ! | CGCCGAACCTTTTCTTGTGG+AGG | + | chr7_3:42636852-42636871 | Msa1104820:intron | 55.0% |
| ! | CGGCGTCCTTTTTCCAACCA+TGG | - | chr7_3:42637120-42637139 | None:intergenic | 55.0% |
| ! | ACCGTGACATTTGGTGGAGC+AGG | - | chr7_3:42637161-42637180 | None:intergenic | 55.0% |
| ! | GTGATGACGAAATGGCTGGC+AGG | - | chr7_3:42637196-42637215 | None:intergenic | 55.0% |
| !! | AATGATGTGGCTTGGTGCGG+TGG | + | chr7_3:42637404-42637423 | Msa1104820:intron | 55.0% |
| !! | CCACCGGCTGGATTTTCTGA+TGG | - | chr7_3:42638257-42638276 | None:intergenic | 55.0% |
| CCATCAGAAAATCCAGCCGG+TGG | + | chr7_3:42638254-42638273 | Msa1104820:CDS | 55.0% | |
| TTGAGAGAGCTGGATGCCAC+CGG | - | chr7_3:42638273-42638292 | None:intergenic | 55.0% | |
| GCCAATTTGGCAGAGGTTGC+GGG | + | chr7_3:42638320-42638339 | Msa1104820:CDS | 55.0% | |
| TCCCGCAACCTCTGCCAAAT+TGG | - | chr7_3:42638324-42638343 | None:intergenic | 55.0% | |
| TTGGCAGAGGTTGCGGGATT+TGG | + | chr7_3:42638326-42638345 | Msa1104820:CDS | 55.0% | |
| GGAGGCAGTAGTGACTGAGA+TGG | + | chr7_3:42638347-42638366 | Msa1104820:CDS | 55.0% | |
| !! | AGCTGAGCTTGCTGAGTCAC+TGG | + | chr7_3:42638719-42638738 | Msa1104820:intron | 55.0% |
| GTACTCTCACACACACACCC+TGG | + | chr7_3:42639380-42639399 | Msa1104820:three_prime_UTR | 55.0% | |
| !! | GACTTGGACTGGTGAGGTGG+AGG | - | chr7_3:42636543-42636562 | None:intergenic | 60.0% |
| TGGGCCTGCGCAAACTCTGA+CGG | - | chr7_3:42636655-42636674 | None:intergenic | 60.0% | |
| GCAGAGGTTGCGGGATTTGG+AGG | + | chr7_3:42638329-42638348 | Msa1104820:CDS | 60.0% | |
| CTTCCGCCACTCATCCTCGG+AGG | - | chr7_3:42631725-42631744 | None:intergenic | 65.0% | |
| GGGCCTGCGCAAACTCTGAC+GGG | - | chr7_3:42636654-42636673 | None:intergenic | 65.0% | |
| GAGAGCTGGATGCCACCGGC+TGG | - | chr7_3:42638269-42638288 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 42631683 | 42639702 | 42631683 | ID=Msa1104820;Name=Msa1104820 |
| chr7_3 | mRNA | 42631683 | 42639702 | 42631683 | ID=Msa1104820-mRNA-1;Parent=Msa1104820;Name=Msa1104820-mRNA-1;_AED=0.21;_eAED=0.21;_QI=92|0.61|0.57|1|0.61|0.5|14|507|449 |
| chr7_3 | exon | 42631683 | 42631814 | 42631683 | ID=Msa1104820-mRNA-1:exon:8652;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42631860 | 42631968 | 42631860 | ID=Msa1104820-mRNA-1:exon:8653;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42632474 | 42632573 | 42632474 | ID=Msa1104820-mRNA-1:exon:8654;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42632811 | 42632972 | 42632811 | ID=Msa1104820-mRNA-1:exon:8655;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42632979 | 42633077 | 42632979 | ID=Msa1104820-mRNA-1:exon:8656;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42633163 | 42633240 | 42633163 | ID=Msa1104820-mRNA-1:exon:8657;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42633670 | 42633771 | 42633670 | ID=Msa1104820-mRNA-1:exon:8658;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42633852 | 42633880 | 42633852 | ID=Msa1104820-mRNA-1:exon:8659;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42633990 | 42634089 | 42633990 | ID=Msa1104820-mRNA-1:exon:8660;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42634188 | 42634292 | 42634188 | ID=Msa1104820-mRNA-1:exon:8661;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42634402 | 42634494 | 42634402 | ID=Msa1104820-mRNA-1:exon:8662;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42636162 | 42636246 | 42636162 | ID=Msa1104820-mRNA-1:exon:8663;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42638205 | 42638429 | 42638205 | ID=Msa1104820-mRNA-1:exon:8664;Parent=Msa1104820-mRNA-1 |
| chr7_3 | exon | 42639173 | 42639702 | 42639173 | ID=Msa1104820-mRNA-1:exon:8665;Parent=Msa1104820-mRNA-1 |
| chr7_3 | five_prime_UTR | 42631683 | 42631774 | 42631683 | ID=Msa1104820-mRNA-1:five_prime_utr;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42631775 | 42631814 | 42631775 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42631860 | 42631968 | 42631860 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42632474 | 42632573 | 42632474 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42632811 | 42632972 | 42632811 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42632979 | 42633077 | 42632979 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42633163 | 42633240 | 42633163 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42633670 | 42633771 | 42633670 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42633852 | 42633880 | 42633852 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42633990 | 42634089 | 42633990 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42634188 | 42634292 | 42634188 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42634402 | 42634494 | 42634402 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42636162 | 42636246 | 42636162 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42638205 | 42638429 | 42638205 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | CDS | 42639173 | 42639195 | 42639173 | ID=Msa1104820-mRNA-1:cds;Parent=Msa1104820-mRNA-1 |
| chr7_3 | three_prime_UTR | 42639196 | 42639702 | 42639196 | ID=Msa1104820-mRNA-1:three_prime_utr;Parent=Msa1104820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
