Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105150 | XP_003622926.2 | 91.463 | 410 | 14 | 3 | 1 | 389 | 1 | 410 | 0.0 | 760 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105150 | sp|Q8LBL5|PRT1_ARATH | 45.205 | 365 | 166 | 8 | 1 | 335 | 5 | 365 | 2.02e-97 | 299 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105150 | G7L188 | 91.463 | 410 | 14 | 3 | 1 | 389 | 1 | 410 | 0.0 | 760 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1021200 | Msa1105150 | 0.894683 | 1.958097e-75 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105150 | MtrunA17_Chr7g0237221 | 91.463 | 410 | 14 | 3 | 1 | 389 | 1 | 410 | 0.0 | 760 |
Msa1105150 | MtrunA17_Chr4g0010101 | 55.526 | 371 | 123 | 8 | 2 | 346 | 4 | 358 | 1.43e-133 | 387 |
Msa1105150 | MtrunA17_Chr7g0237261 | 92.784 | 97 | 7 | 0 | 1 | 97 | 1 | 97 | 9.13e-56 | 178 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1105150 | AT3G24800.1 | 45.205 | 365 | 166 | 8 | 1 | 335 | 5 | 365 | 2.05e-98 | 299 |
Find 85 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGTCATATGTGCTGTTTC+TGG | 0.132135 | 7_3:-43326728 | Msa1105150:CDS |
GAAGGCAGAGATAGAGAATT+TGG | 0.233360 | 7_3:+43327931 | None:intergenic |
CGGTAACAACGGTGAAAATA+TGG | 0.244050 | 7_3:-43322966 | Msa1105150:CDS |
CTATCTCTGCCTTCAGAAAA+TGG | 0.260590 | 7_3:-43327922 | Msa1105150:exon |
TCTTTCAACATCCAGTCTTT+AGG | 0.278763 | 7_3:-43321726 | Msa1105150:CDS |
GTTCTCTGTGCATATTCTTC+AGG | 0.323222 | 7_3:+43324603 | None:intergenic |
TAATTTCAGGTTCTCCTTCA+TGG | 0.328542 | 7_3:+43324994 | None:intergenic |
TTCCTCCTCTACGATAAATC+TGG | 0.336084 | 7_3:-43325072 | Msa1105150:CDS |
TGTGAATCACAAGCTAAATT+TGG | 0.337553 | 7_3:-43325113 | Msa1105150:CDS |
ATTAAATCGACCGGGAAGTT+TGG | 0.339988 | 7_3:+43321845 | None:intergenic |
ATACAAGAGGAAGATGTCTT+AGG | 0.351778 | 7_3:+43324546 | None:intergenic |
ACTCGAGTACCAGTAATTTC+AGG | 0.355130 | 7_3:+43324981 | None:intergenic |
ACGCAACAACAAAAGGAATC+TGG | 0.356154 | 7_3:+43327849 | None:intergenic |
AATCTAAGTGTCCAACTTGT+AGG | 0.375096 | 7_3:-43326674 | Msa1105150:CDS |
AGACATACCAAGGGTTTGAT+TGG | 0.383910 | 7_3:+43326566 | None:intergenic |
GTCCTTCTATTGTAAGCAAC+AGG | 0.387178 | 7_3:+43326588 | None:intergenic |
ATCCTGTTGCTTACAATAGA+AGG | 0.392555 | 7_3:-43326590 | Msa1105150:CDS |
CCAAAGTGAGCTTTCGAGTC+AGG | 0.400318 | 7_3:+43322929 | None:intergenic |
CAGACTTTCGGAAATCCTCT+TGG | 0.402123 | 7_3:+43324660 | None:intergenic |
TTAGAGGAAGAGAAGAAATC+AGG | 0.403372 | 7_3:-43325167 | Msa1105150:intron |
AGGATTTCCGAAAGTCTGTT+TGG | 0.403934 | 7_3:-43324655 | Msa1105150:CDS |
GAAGGAGAACCTGAAATTAC+TGG | 0.405207 | 7_3:-43324990 | Msa1105150:intron |
GAAGCACTTGGGTTGTTTGA+TGG | 0.422048 | 7_3:-43321684 | Msa1105150:CDS |
GACAGTCGCTCCAAACTTCC+CGG | 0.423547 | 7_3:-43321855 | Msa1105150:CDS |
ATTCTATGTTTCCTAAAGAC+TGG | 0.428866 | 7_3:+43321715 | None:intergenic |
GGCTGATCACTGGACAGTTA+AGG | 0.432087 | 7_3:-43321755 | Msa1105150:CDS |
GAAGCATTTGGCAGACTGTT+GGG | 0.433058 | 7_3:+43326634 | None:intergenic |
TTCAGAAGTTCCGACATTGC+TGG | 0.439795 | 7_3:+43325040 | None:intergenic |
TTCTTAGGTTTATTAGATAA+CGG | 0.442432 | 7_3:-43322986 | Msa1105150:intron |
GCTGATCACTGGACAGTTAA+GGG | 0.453416 | 7_3:-43321754 | Msa1105150:CDS |
GAATTTACAGCTGAAGCACT+TGG | 0.454031 | 7_3:-43321696 | Msa1105150:CDS |
TGTCGGAACTTCTGAATGTA+TGG | 0.457216 | 7_3:-43325033 | Msa1105150:CDS |
TCAAACTCCAAACAGACTTT+CGG | 0.459929 | 7_3:+43324648 | None:intergenic |
CTTCATGTTCATCGTGATCA+AGG | 0.464343 | 7_3:+43327880 | None:intergenic |
CAGACAAACGCAACAACAAA+AGG | 0.468211 | 7_3:+43327842 | None:intergenic |
AGTTCCGACATTGCTGGAGT+TGG | 0.473470 | 7_3:+43325046 | None:intergenic |
AACAGATGCTATTGAACTAA+AGG | 0.473532 | 7_3:-43324583 | Msa1105150:CDS |
TTCGGAAATCCTCTTGGATG+TGG | 0.478072 | 7_3:+43324666 | None:intergenic |
GTTGTCTTACATAGTACAAT+GGG | 0.481481 | 7_3:+43326827 | None:intergenic |
TCGAAAGCTCACTTTGGAGT+TGG | 0.481647 | 7_3:-43322923 | Msa1105150:CDS |
TTGTAGCATCAGGTTCATCT+TGG | 0.481698 | 7_3:+43321649 | None:intergenic |
CGCAACAACAAAAGGAATCT+GGG | 0.481878 | 7_3:+43327850 | None:intergenic |
AATTTCAGGTTCTCCTTCAT+GGG | 0.482482 | 7_3:+43324995 | None:intergenic |
TGAAGCATTTGGCAGACTGT+TGG | 0.487089 | 7_3:+43326633 | None:intergenic |
GTAGTTCTTCATTGCGGTCA+TGG | 0.487400 | 7_3:-43324861 | Msa1105150:intron |
CCTGACTCGAAAGCTCACTT+TGG | 0.493932 | 7_3:-43322929 | Msa1105150:CDS |
ATTATGTTACGACGAGGGTC+AGG | 0.504681 | 7_3:+43321783 | None:intergenic |
TTTATCGTAGAGGAGGAAGA+AGG | 0.510014 | 7_3:+43325077 | None:intergenic |
CAGAGATAGAGAATTTGGAA+TGG | 0.518418 | 7_3:+43327936 | None:intergenic |
ATGTTGTTGATTAAATCGAC+CGG | 0.525287 | 7_3:+43321836 | None:intergenic |
CACATTGTACACATCACGTC+AGG | 0.527410 | 7_3:+43324906 | None:intergenic |
ATAATGTTGAGGCTGATCAC+TGG | 0.541980 | 7_3:-43321765 | Msa1105150:CDS |
ATGTGTCGAGATCAAATTGA+GGG | 0.551782 | 7_3:+43325135 | None:intergenic |
AGAAGGACCAATCAAACCCT+TGG | 0.556347 | 7_3:-43326573 | Msa1105150:intron |
CAACCTGGGTCTTCCCATGA+AGG | 0.559563 | 7_3:-43325008 | Msa1105150:CDS |
TGACCGCAATGAAGAACTAC+AGG | 0.562056 | 7_3:+43324864 | None:intergenic |
CTTCATGGGAAGACCCAGGT+TGG | 0.564739 | 7_3:+43325009 | None:intergenic |
CGTTGTCTTACATAGTACAA+TGG | 0.567668 | 7_3:+43326826 | None:intergenic |
TTATCGTAGAGGAGGAAGAA+GGG | 0.571648 | 7_3:+43325078 | None:intergenic |
GATTCCAACTCCAGCAATGT+CGG | 0.586368 | 7_3:-43325050 | Msa1105150:CDS |
AATTTACAGCTGAAGCACTT+GGG | 0.587037 | 7_3:-43321695 | Msa1105150:CDS |
CTGAATGTATGGACCAACCT+GGG | 0.596406 | 7_3:-43325022 | Msa1105150:CDS |
GCACTTGGGTTGTTTGATGG+TGG | 0.598437 | 7_3:-43321681 | Msa1105150:CDS |
AAGACTGGATGTTGAAAGAA+CGG | 0.601005 | 7_3:+43321730 | None:intergenic |
TCTGAATGTATGGACCAACC+TGG | 0.603579 | 7_3:-43325023 | Msa1105150:CDS |
ATCCAGATTTATCGTAGAGG+AGG | 0.605715 | 7_3:+43325070 | None:intergenic |
TAGTATTGATGCCTACAAGT+TGG | 0.620663 | 7_3:+43326663 | None:intergenic |
ACAACGGTGAAAATATGGAA+TGG | 0.622237 | 7_3:-43322961 | Msa1105150:CDS |
TGTTGTTGATTAAATCGACC+GGG | 0.622865 | 7_3:+43321837 | None:intergenic |
CATCCTGTAGTTCTTCATTG+CGG | 0.631699 | 7_3:-43324867 | Msa1105150:CDS |
TCTCCTTCATGGGAAGACCC+AGG | 0.634624 | 7_3:+43325005 | None:intergenic |
GATGTGGAATTTGACAAACT+TGG | 0.636520 | 7_3:+43324682 | None:intergenic |
CATGTGTCGAGATCAAATTG+AGG | 0.638580 | 7_3:+43325134 | None:intergenic |
TGTCAAATTCCACATCCAAG+AGG | 0.641776 | 7_3:-43324675 | Msa1105150:CDS |
GTGTACATAAATCAATGAGT+GGG | 0.647814 | 7_3:-43326704 | Msa1105150:CDS |
AAGCTTGAAACTGTGATCTG+AGG | 0.649140 | 7_3:+43321812 | None:intergenic |
CTCAACATTATGTTACGACG+AGG | 0.657315 | 7_3:+43321777 | None:intergenic |
GGAATCCAGATTTATCGTAG+AGG | 0.677717 | 7_3:+43325067 | None:intergenic |
TTATTAGATAACGGTAACAA+CGG | 0.687872 | 7_3:-43322977 | Msa1105150:CDS |
TGTTGTGTAAGATTATCCTG+AGG | 0.689095 | 7_3:+43324942 | None:intergenic |
TGTGTACATAAATCAATGAG+TGG | 0.690277 | 7_3:-43326705 | Msa1105150:CDS |
TGTGTCGAGATCAAATTGAG+GGG | 0.711213 | 7_3:+43325136 | None:intergenic |
TCAACATTATGTTACGACGA+GGG | 0.714087 | 7_3:+43321778 | None:intergenic |
CTCGTCGTAACATAATGTTG+AGG | 0.716659 | 7_3:-43321776 | Msa1105150:CDS |
TGTACATAAATCAATGAGTG+GGG | 0.737997 | 7_3:-43326703 | Msa1105150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr7_3:43323481-43323500 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+AGG | - | chr7_3:43323481-43323500 | Msa1105150:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr7_3:43323480-43323499 | Msa1105150:intron | 0.0% |
!! | ATATATATATATATATATAT+GGG | + | chr7_3:43323481-43323500 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | + | chr7_3:43323480-43323499 | None:intergenic | 0.0% |
!! | TTTAATAAAAATAAAAATAA+AGG | + | chr7_3:43326283-43326302 | None:intergenic | 0.0% |
!! | TTTGAATAGTAAATAATAAT+TGG | + | chr7_3:43321918-43321937 | None:intergenic | 10.0% |
!! | ATTATTATTTACTATTCAAA+AGG | - | chr7_3:43321918-43321937 | Msa1105150:intron | 10.0% |
!! | TTATTATTTACTATTCAAAA+GGG | - | chr7_3:43321919-43321938 | Msa1105150:intron | 10.0% |
!!! | TCATCATTTTAAAAAAATAA+AGG | + | chr7_3:43321957-43321976 | None:intergenic | 10.0% |
!!! | ATTTTTATTCTAAAGTTAAA+AGG | - | chr7_3:43322646-43322665 | Msa1105150:intron | 10.0% |
!! | TTAAAATGAAATAGTATTAT+AGG | + | chr7_3:43325402-43325421 | None:intergenic | 10.0% |
!!! | GTTATTTTGAATAATTTTTA+TGG | + | chr7_3:43325425-43325444 | None:intergenic | 10.0% |
!!! | AATTTTTTCTCTTTTTATCA+AGG | - | chr7_3:43321879-43321898 | Msa1105150:CDS | 15.0% |
!! | ATGAATTATTATAACTCTAA+TGG | + | chr7_3:43322183-43322202 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAACAGTATC+CGG | + | chr7_3:43322515-43322534 | None:intergenic | 15.0% |
!! | TATAATTTAATAAAGAAACG+AGG | + | chr7_3:43322730-43322749 | None:intergenic | 15.0% |
!! | AAATTAATAGTAACTATCTT+TGG | + | chr7_3:43323145-43323164 | None:intergenic | 15.0% |
!!! | GTTTTATTTCTAATGTTTTA+TGG | - | chr7_3:43324240-43324259 | Msa1105150:intron | 15.0% |
!! | AATAAATACAATTTACTAGA+AGG | + | chr7_3:43324372-43324391 | None:intergenic | 15.0% |
!! | TAATAAAATATACATACAAG+AGG | + | chr7_3:43325096-43325115 | None:intergenic | 15.0% |
!!! | TGCTTTTAGATTTTTTTATA+TGG | - | chr7_3:43325189-43325208 | Msa1105150:intron | 15.0% |
!! | ATAACAATAAGTAATAGATA+TGG | + | chr7_3:43325623-43325642 | None:intergenic | 15.0% |
!!! | AAATCATTTTTAGTGATTTA+TGG | - | chr7_3:43325746-43325765 | Msa1105150:intron | 15.0% |
!!! | AATCATTTTTAGTGATTTAT+GGG | - | chr7_3:43325747-43325766 | Msa1105150:intron | 15.0% |
!!! | TAATTATTTTCTTCTTTCTT+AGG | - | chr7_3:43326625-43326644 | Msa1105150:CDS | 15.0% |
!! | TTAACAATATGTAGAATTAA+AGG | + | chr7_3:43326880-43326899 | None:intergenic | 15.0% |
!!! | ATTCTACATATTGTTAATTT+TGG | - | chr7_3:43326883-43326902 | Msa1105150:intron | 15.0% |
!!! | TATTAGTTTATAGATGTTAA+CGG | - | chr7_3:43327463-43327482 | Msa1105150:intron | 15.0% |
!! | AAGAGAAAAAATTGAACATA+GGG | + | chr7_3:43321872-43321891 | None:intergenic | 20.0% |
!! | AAAGAGAAAAAATTGAACAT+AGG | + | chr7_3:43321873-43321892 | None:intergenic | 20.0% |
!!! | TTAGCTTTAGTTAATTTGAT+TGG | - | chr7_3:43321995-43322014 | Msa1105150:intron | 20.0% |
!!! | ATGGACTAATACATAAAAAT+TGG | + | chr7_3:43322448-43322467 | None:intergenic | 20.0% |
!!! | TAGAATAACTTGTATTAATG+AGG | - | chr7_3:43323201-43323220 | Msa1105150:intron | 20.0% |
!!! | GATTTTTTTATATGGTTTGT+TGG | - | chr7_3:43325197-43325216 | Msa1105150:intron | 20.0% |
!!! | ATCATTTTTAGTGATTTATG+GGG | - | chr7_3:43325748-43325767 | Msa1105150:intron | 20.0% |
!! | ACTAAACCATAGATTTAAAT+TGG | + | chr7_3:43325896-43325915 | None:intergenic | 20.0% |
!!! | CCATTTTAATGGTAATTATT+GGG | + | chr7_3:43326013-43326032 | None:intergenic | 20.0% |
!!! | ACCATTTTAATGGTAATTAT+TGG | + | chr7_3:43326014-43326033 | None:intergenic | 20.0% |
!! | AACTTATAATCCAGAATTTA+AGG | + | chr7_3:43326147-43326166 | None:intergenic | 20.0% |
!!! | TATACTAATTTTCTATCTCT+TGG | - | chr7_3:43326588-43326607 | Msa1105150:CDS | 20.0% |
!! | TTCTTAGGTTTATTAGATAA+CGG | - | chr7_3:43326640-43326659 | Msa1105150:CDS | 20.0% |
!! | TAAAAGCCATATTATGTATA+TGG | - | chr7_3:43326920-43326939 | Msa1105150:intron | 20.0% |
!!! | AAATTTCCTTTCTTCTTTTA+AGG | - | chr7_3:43326977-43326996 | Msa1105150:intron | 20.0% |
!!! | AATTTCCTTTCTTCTTTTAA+GGG | - | chr7_3:43326978-43326997 | Msa1105150:intron | 20.0% |
!! | TGAGAAAACTGAAAATAATA+AGG | + | chr7_3:43327016-43327035 | None:intergenic | 20.0% |
!! | AGCAACAAAGAAAAATAAAT+AGG | + | chr7_3:43327112-43327131 | None:intergenic | 20.0% |
!! | ATTATATCCTAAGTAAAGAA+TGG | + | chr7_3:43327277-43327296 | None:intergenic | 20.0% |
!!! | TTTATTTTTCTGAGTATCTT+TGG | - | chr7_3:43327596-43327615 | Msa1105150:intron | 20.0% |
!! | TTATATCTATTTCCAATGAT+AGG | + | chr7_3:43327699-43327718 | None:intergenic | 20.0% |
! | ATGTAACTAGAATTTAGAAG+AGG | - | chr7_3:43322130-43322149 | Msa1105150:intron | 25.0% |
!!! | ACTCGTTTGATATTTGTTTT+TGG | - | chr7_3:43322252-43322271 | Msa1105150:intron | 25.0% |
!! | TTGGTAATTCATAGTTAGTA+TGG | - | chr7_3:43322308-43322327 | Msa1105150:intron | 25.0% |
! | TGGTAATTCATAGTTAGTAT+GGG | - | chr7_3:43322309-43322328 | Msa1105150:intron | 25.0% |
! | GCATAAGTTCATTTGAATAT+AGG | - | chr7_3:43323099-43323118 | Msa1105150:intron | 25.0% |
!! | AGCTTTTATAAACATTACAC+AGG | + | chr7_3:43324085-43324104 | None:intergenic | 25.0% |
! | CTTATAATGTCTTGGAATTT+GGG | + | chr7_3:43324159-43324178 | None:intergenic | 25.0% |
! | TCTTATAATGTCTTGGAATT+TGG | + | chr7_3:43324160-43324179 | None:intergenic | 25.0% |
! | CAGTTAATCTTATAATGTCT+TGG | + | chr7_3:43324167-43324186 | None:intergenic | 25.0% |
! | AAAAAATCTAAAAGCAAAGC+TGG | + | chr7_3:43325185-43325204 | None:intergenic | 25.0% |
! | GAAAAGACATTAAGTGATTT+AGG | - | chr7_3:43325360-43325379 | Msa1105150:intron | 25.0% |
! | ATTGTTCTAATAAAGACACT+TGG | - | chr7_3:43325467-43325486 | Msa1105150:intron | 25.0% |
! | TTGTTCTAATAAAGACACTT+GGG | - | chr7_3:43325468-43325487 | Msa1105150:intron | 25.0% |
!! | CTTTTGGATAAAATTGTTGT+GGG | + | chr7_3:43325496-43325515 | None:intergenic | 25.0% |
!! | CACAACAATTTTATCCAAAA+GGG | - | chr7_3:43325495-43325514 | Msa1105150:intron | 25.0% |
!! | ACAACAATTTTATCCAAAAG+GGG | - | chr7_3:43325496-43325515 | Msa1105150:intron | 25.0% |
! | CCTAAATAAATAGGAAAATC+AGG | + | chr7_3:43325655-43325674 | None:intergenic | 25.0% |
!! | CCTGATTTTCCTATTTATTT+AGG | - | chr7_3:43325652-43325671 | Msa1105150:intron | 25.0% |
! | AGACTCAATCCTAAATAAAT+AGG | + | chr7_3:43325664-43325683 | None:intergenic | 25.0% |
!! | ATACAATCATTTTCCTATGT+TGG | - | chr7_3:43325684-43325703 | Msa1105150:intron | 25.0% |
!! | TACAATCATTTTCCTATGTT+GGG | - | chr7_3:43325685-43325704 | Msa1105150:intron | 25.0% |
! | AACTCTTAGAATTTGGATTA+AGG | + | chr7_3:43325711-43325730 | None:intergenic | 25.0% |
! | AGTTGTAAACTCTTAGAATT+TGG | + | chr7_3:43325718-43325737 | None:intergenic | 25.0% |
! | AACCATAGATTTAAATTGGA+TGG | + | chr7_3:43325892-43325911 | None:intergenic | 25.0% |
! | TTGTCTAAAAACAATCTAGA+GGG | - | chr7_3:43325929-43325948 | Msa1105150:intron | 25.0% |
!! | AAATATTGACTGTAATCGAA+AGG | + | chr7_3:43325957-43325976 | None:intergenic | 25.0% |
! | CCCAATAATTACCATTAAAA+TGG | - | chr7_3:43326010-43326029 | Msa1105150:intron | 25.0% |
!! | TTTCTACTGAACCATTTTAA+TGG | + | chr7_3:43326024-43326043 | None:intergenic | 25.0% |
! | ATTAAAATGGTTCAGTAGAA+AGG | - | chr7_3:43326023-43326042 | Msa1105150:intron | 25.0% |
! | AAATCTGTGTCAAAATTATC+CGG | - | chr7_3:43326300-43326319 | Msa1105150:intron | 25.0% |
! | AAATTGTCTCCTTATTGAAT+CGG | + | chr7_3:43326427-43326446 | None:intergenic | 25.0% |
!! | ACAATCTTCAGTGTATTTTA+GGG | + | chr7_3:43326493-43326512 | None:intergenic | 25.0% |
!! | TACAATCTTCAGTGTATTTT+AGG | + | chr7_3:43326494-43326513 | None:intergenic | 25.0% |
! | AAAACAGAGAATGTATACTA+GGG | + | chr7_3:43326540-43326559 | None:intergenic | 25.0% |
! | AAAAACAGAGAATGTATACT+AGG | + | chr7_3:43326541-43326560 | None:intergenic | 25.0% |
!! | TTATTAGATAACGGTAACAA+CGG | - | chr7_3:43326649-43326668 | Msa1105150:CDS | 25.0% |
! | TTGGAACCATATACATAATA+TGG | + | chr7_3:43326929-43326948 | None:intergenic | 25.0% |
!! | GATCATATCGATTATCTTAT+TGG | + | chr7_3:43326948-43326967 | None:intergenic | 25.0% |
!!! | ATAGTTTTGTAAAGAAGACA+TGG | - | chr7_3:43327037-43327056 | Msa1105150:intron | 25.0% |
!!! | TAGTTTTGTAAAGAAGACAT+GGG | - | chr7_3:43327038-43327057 | Msa1105150:intron | 25.0% |
! | TTTATATAACTAAGTTGCAG+TGG | - | chr7_3:43327135-43327154 | Msa1105150:intron | 25.0% |
! | AGTAAAGAATGGAATTAGTT+TGG | + | chr7_3:43327266-43327285 | None:intergenic | 25.0% |
! | ACTAATTCCATTCTTTACTT+AGG | - | chr7_3:43327267-43327286 | Msa1105150:intron | 25.0% |
!!! | AAAATAGGTTTTGATCTTTG+TGG | - | chr7_3:43327738-43327757 | Msa1105150:intron | 25.0% |
! | AAAGGCATAGAATTGAAAGA+TGG | + | chr7_3:43321823-43321842 | None:intergenic | 30.0% |
TCATAAAAGGGGGAAAAAAA+AGG | + | chr7_3:43321841-43321860 | None:intergenic | 30.0% | |
! | AGGGTGTGTTTTTCATAAAA+GGG | + | chr7_3:43321853-43321872 | None:intergenic | 30.0% |
! | TAGGGTGTGTTTTTCATAAA+AGG | + | chr7_3:43321854-43321873 | None:intergenic | 30.0% |
TTGCATTATCTTCAGTGAAT+TGG | + | chr7_3:43322110-43322129 | None:intergenic | 30.0% | |
TAATTCATAGTTAGTATGGG+AGG | - | chr7_3:43322312-43322331 | Msa1105150:intron | 30.0% | |
TAAAGTTAAAAGGATGATGC+TGG | - | chr7_3:43322656-43322675 | Msa1105150:intron | 30.0% | |
!!! | TTGGTCAATGTGTCATTTTA+AGG | - | chr7_3:43322690-43322709 | Msa1105150:intron | 30.0% |
GTTGTCTTACATAGTACAAT+GGG | + | chr7_3:43322802-43322821 | None:intergenic | 30.0% | |
TGTGTACATAAATCAATGAG+TGG | - | chr7_3:43322921-43322940 | Msa1105150:CDS | 30.0% | |
GTGTACATAAATCAATGAGT+GGG | - | chr7_3:43322922-43322941 | Msa1105150:CDS | 30.0% | |
TGTACATAAATCAATGAGTG+GGG | - | chr7_3:43322923-43322942 | Msa1105150:CDS | 30.0% | |
! | GAAGCAAAAAATGAAGCATT+TGG | + | chr7_3:43323007-43323026 | None:intergenic | 30.0% |
TAGAGAAATAGACATACCAA+GGG | + | chr7_3:43323072-43323091 | None:intergenic | 30.0% | |
TTAGAGAAATAGACATACCA+AGG | + | chr7_3:43323073-43323092 | None:intergenic | 30.0% | |
ATACTACGATAACATCATAC+CGG | - | chr7_3:43323260-43323279 | Msa1105150:intron | 30.0% | |
ACATCATACCGGTATATATA+TGG | - | chr7_3:43323271-43323290 | Msa1105150:intron | 30.0% | |
CATCATACCGGTATATATAT+GGG | - | chr7_3:43323272-43323291 | Msa1105150:intron | 30.0% | |
AGCAAAACCCATATATATAC+CGG | + | chr7_3:43323282-43323301 | None:intergenic | 30.0% | |
ACACCTTCATAAAAGTAAGT+TGG | - | chr7_3:43323385-43323404 | Msa1105150:intron | 30.0% | |
!! | ACACCAACTTACTTTTATGA+AGG | + | chr7_3:43323620-43323639 | None:intergenic | 30.0% |
ATAAAAGACACCTTCACAAA+AGG | + | chr7_3:43323571-43323590 | None:intergenic | 30.0% | |
!! | ACACCAACTTACTTTTATGA+AGG | - | chr7_3:43323620-43323639 | Msa1105150:intron | 30.0% |
ACACCTTCATAAAAGTAAGT+TGG | + | chr7_3:43323385-43323404 | None:intergenic | 30.0% | |
AAAGTGAAAATCACACCTTA+AGG | - | chr7_3:43323668-43323687 | Msa1105150:intron | 30.0% | |
! | TTTTATCAAGTCACACCTTA+AGG | + | chr7_3:43323686-43323705 | None:intergenic | 30.0% |
! | CATTTTGCTTACACATATGA+AGG | + | chr7_3:43323846-43323865 | None:intergenic | 30.0% |
ATTCTATTATGCTTTAGTCC+AGG | + | chr7_3:43324195-43324214 | None:intergenic | 30.0% | |
TGGACTAAAGCATAATAGAA+TGG | - | chr7_3:43324194-43324213 | Msa1105150:intron | 30.0% | |
CCAATAATCAGAATAAGACA+CGG | + | chr7_3:43324294-43324313 | None:intergenic | 30.0% | |
!!! | TCATTGATCTCTTGTTTTAG+AGG | - | chr7_3:43324443-43324462 | Msa1105150:intron | 30.0% |
TGTGAATCACAAGCTAAATT+TGG | - | chr7_3:43324513-43324532 | Msa1105150:intron | 30.0% | |
AATATACTTGAGAAAACGTC+AGG | + | chr7_3:43324881-43324900 | None:intergenic | 30.0% | |
!! | TTTGGAGTTTGATCACTTTT+TGG | - | chr7_3:43324989-43325008 | Msa1105150:intron | 30.0% |
AACAGATGCTATTGAACTAA+AGG | - | chr7_3:43325043-43325062 | Msa1105150:CDS | 30.0% | |
GCATTTGCACTTAAGATAAA+TGG | - | chr7_3:43325253-43325272 | Msa1105150:intron | 30.0% | |
! | CCTTTTGGATAAAATTGTTG+TGG | + | chr7_3:43325497-43325516 | None:intergenic | 30.0% |
! | CCACAACAATTTTATCCAAA+AGG | - | chr7_3:43325494-43325513 | Msa1105150:intron | 30.0% |
! | CAACAATTTTATCCAAAAGG+GGG | - | chr7_3:43325497-43325516 | Msa1105150:intron | 30.0% |
AAAATTCTCTTAGCGTATCT+TGG | - | chr7_3:43325589-43325608 | Msa1105150:intron | 30.0% | |
ACCACATCAAGAATGAATAA+AGG | + | chr7_3:43325779-43325798 | None:intergenic | 30.0% | |
! | GGTATCAGATTTTGTATAAG+AGG | + | chr7_3:43325859-43325878 | None:intergenic | 30.0% |
! | AAATTGGATGGCAATTTTCA+AGG | + | chr7_3:43325880-43325899 | None:intergenic | 30.0% |
TGCCATCCAATTTAAATCTA+TGG | - | chr7_3:43325887-43325906 | Msa1105150:intron | 30.0% | |
CTTGTCTAAAAACAATCTAG+AGG | - | chr7_3:43325928-43325947 | Msa1105150:intron | 30.0% | |
!! | AATTTGAGAAGTGTTACAAC+TGG | - | chr7_3:43326099-43326118 | Msa1105150:intron | 30.0% |
TTGTTTAGAGAATCCAGATA+AGG | + | chr7_3:43326244-43326263 | None:intergenic | 30.0% | |
TTATCTGGATTCTCTAAACA+AGG | - | chr7_3:43326243-43326262 | Msa1105150:intron | 30.0% | |
! | TGTCAAAATTATCCGGTTTT+AGG | - | chr7_3:43326307-43326326 | Msa1105150:intron | 30.0% |
ATCCTAATTCCGATTCAATA+AGG | - | chr7_3:43326415-43326434 | Msa1105150:intron | 30.0% | |
TAAGGAGACAATTTATGACA+TGG | - | chr7_3:43326433-43326452 | Msa1105150:intron | 30.0% | |
CACTTCAAACATATGATCTA+CGG | - | chr7_3:43326460-43326479 | Msa1105150:intron | 30.0% | |
TCATAAGCATGCATTTAACA+AGG | + | chr7_3:43326843-43326862 | None:intergenic | 30.0% | |
! | GAATGGAATTAGTTTGGAAT+CGG | + | chr7_3:43327209-43327228 | None:intergenic | 30.0% |
AGTGAAGAATGGAATTAGTT+TGG | + | chr7_3:43327215-43327234 | None:intergenic | 30.0% | |
TTTATATCCTGAGTGAAGAA+TGG | + | chr7_3:43327226-43327245 | None:intergenic | 30.0% | |
! | GAATGGAATTAGTTTGGAAT+CGG | + | chr7_3:43327209-43327228 | None:intergenic | 30.0% |
!! | TTTTGGAAGACTGATATTTG+AGG | + | chr7_3:43327370-43327389 | None:intergenic | 30.0% |
AGTTTCACATAACCAATCTA+GGG | + | chr7_3:43327416-43327435 | None:intergenic | 30.0% | |
ATATAAATGCAATGACTGCA+AGG | - | chr7_3:43327713-43327732 | Msa1105150:intron | 30.0% | |
AATGACTGCAAGGAAAAAAT+AGG | - | chr7_3:43327723-43327742 | Msa1105150:intron | 30.0% | |
! | ATGTTGTTGATTAAATCGAC+CGG | + | chr7_3:43327793-43327812 | None:intergenic | 30.0% |
ATTCTATGTTTCCTAAAGAC+TGG | + | chr7_3:43327914-43327933 | None:intergenic | 30.0% | |
CAGAGATAGAGAATTTGGAA+TGG | + | chr7_3:43321693-43321712 | None:intergenic | 35.0% | |
! | TTGTGTTCTCCATTTTCTGA+AGG | + | chr7_3:43321716-43321735 | None:intergenic | 35.0% |
! | GGTGTGTTTTTCATAAAAGG+GGG | + | chr7_3:43321851-43321870 | None:intergenic | 35.0% |
! | GGGTGTGTTTTTCATAAAAG+GGG | + | chr7_3:43321852-43321871 | None:intergenic | 35.0% |
!! | TCTGAAGTTGATATGCATGT+AGG | - | chr7_3:43322045-43322064 | Msa1105150:intron | 35.0% |
!! | CTGAAGTTGATATGCATGTA+GGG | - | chr7_3:43322046-43322065 | Msa1105150:intron | 35.0% |
GAAGAGGAAAAACTCATCAT+TGG | - | chr7_3:43322146-43322165 | Msa1105150:intron | 35.0% | |
AGGAAAAACTCATCATTGGT+TGG | - | chr7_3:43322150-43322169 | Msa1105150:intron | 35.0% | |
AACGAGTCACATTACATTCT+GGG | + | chr7_3:43322239-43322258 | None:intergenic | 35.0% | |
AAACGAGTCACATTACATTC+TGG | + | chr7_3:43322240-43322259 | None:intergenic | 35.0% | |
ATGGGAGGTAAATAATGTCT+AGG | - | chr7_3:43322327-43322346 | Msa1105150:intron | 35.0% | |
ACATAAAAATTGGCACCTGA+AGG | + | chr7_3:43322438-43322457 | None:intergenic | 35.0% | |
GTATTAGTCCATATAGAGCT+TGG | - | chr7_3:43322456-43322475 | Msa1105150:intron | 35.0% | |
AAAAAACAGTATCCGGTCAA+AGG | + | chr7_3:43322508-43322527 | None:intergenic | 35.0% | |
!! | CTCACGAATGATTTGTCTTT+TGG | - | chr7_3:43322579-43322598 | Msa1105150:intron | 35.0% |
!! | TTGTCTTTTGGTAATCTTGC+TGG | - | chr7_3:43322591-43322610 | Msa1105150:intron | 35.0% |
!!! | TAAAAGGATGATGCTGGTTT+TGG | - | chr7_3:43322662-43322681 | Msa1105150:intron | 35.0% |
TAACACTACTTTCATCATGC+AGG | - | chr7_3:43322761-43322780 | Msa1105150:intron | 35.0% | |
AACACTACTTTCATCATGCA+GGG | - | chr7_3:43322762-43322781 | Msa1105150:intron | 35.0% | |
CGTTGTCTTACATAGTACAA+TGG | + | chr7_3:43322803-43322822 | None:intergenic | 35.0% | |
AATCTAAGTGTCCAACTTGT+AGG | - | chr7_3:43322952-43322971 | Msa1105150:CDS | 35.0% | |
!! | TAGTATTGATGCCTACAAGT+TGG | + | chr7_3:43322966-43322985 | None:intergenic | 35.0% |
! | ATCCTGTTGCTTACAATAGA+AGG | - | chr7_3:43323036-43323055 | Msa1105150:intron | 35.0% |
AAAGTGAAAATCACACCTTG+AGG | + | chr7_3:43323343-43323362 | None:intergenic | 35.0% | |
CTAAAAGACACCTTCACAAA+AGG | - | chr7_3:43323440-43323459 | Msa1105150:intron | 35.0% | |
! | ATAGAAGACACCTTTTGTGA+AGG | - | chr7_3:43323558-43323577 | Msa1105150:intron | 35.0% |
TTGATAAAAGACACCACCAA+AGG | - | chr7_3:43323697-43323716 | Msa1105150:intron | 35.0% | |
TGATAAAAGACACCACCAAA+GGG | - | chr7_3:43323698-43323717 | Msa1105150:intron | 35.0% | |
GATCATTCAAGTGCATAACT+AGG | - | chr7_3:43323869-43323888 | Msa1105150:intron | 35.0% | |
TTCCATATTGCCTAGAGATA+TGG | - | chr7_3:43323921-43323940 | Msa1105150:intron | 35.0% | |
TCAAACACCTTCATTCTGTT+CGG | - | chr7_3:43324017-43324036 | Msa1105150:intron | 35.0% | |
! | AATGTCTTGGAATTTGGGTT+GGG | + | chr7_3:43324154-43324173 | None:intergenic | 35.0% |
TAATGTCTTGGAATTTGGGT+TGG | + | chr7_3:43324155-43324174 | None:intergenic | 35.0% | |
! | GATAATTTTCTGCAGCTTTG+TGG | - | chr7_3:43324216-43324235 | Msa1105150:intron | 35.0% |
! | CCGTGTCTTATTCTGATTAT+TGG | - | chr7_3:43324291-43324310 | Msa1105150:intron | 35.0% |
TAGAAGGTGATGTTGAGAAA+GGG | + | chr7_3:43324356-43324375 | None:intergenic | 35.0% | |
TTAGAGGAAGAGAAGAAATC+AGG | - | chr7_3:43324459-43324478 | Msa1105150:intron | 35.0% | |
ATGTGTCGAGATCAAATTGA+GGG | + | chr7_3:43324494-43324513 | None:intergenic | 35.0% | |
!! | AATTTCAGGTTCTCCTTCAT+GGG | + | chr7_3:43324634-43324653 | None:intergenic | 35.0% |
!! | TAATTTCAGGTTCTCCTTCA+TGG | + | chr7_3:43324635-43324654 | None:intergenic | 35.0% |
TGTTGTGTAAGATTATCCTG+AGG | + | chr7_3:43324687-43324706 | None:intergenic | 35.0% | |
GATGTGGAATTTGACAAACT+TGG | + | chr7_3:43324947-43324966 | None:intergenic | 35.0% | |
TCAAACTCCAAACAGACTTT+CGG | + | chr7_3:43324981-43325000 | None:intergenic | 35.0% | |
ATACAAGAGGAAGATGTCTT+AGG | + | chr7_3:43325083-43325102 | None:intergenic | 35.0% | |
TTCAGTTACAACTATCTCGT+AGG | + | chr7_3:43325343-43325362 | None:intergenic | 35.0% | |
TTAAGTGATTTAGGTGTGAG+TGG | - | chr7_3:43325369-43325388 | Msa1105150:intron | 35.0% | |
! | AGAGAATTTTCTCCATAGCT+GGG | + | chr7_3:43325579-43325598 | None:intergenic | 35.0% |
! | AAGAGAATTTTCTCCATAGC+TGG | + | chr7_3:43325580-43325599 | None:intergenic | 35.0% |
! | TTTTAGTGATTTATGGGGAC+TGG | - | chr7_3:43325753-43325772 | Msa1105150:intron | 35.0% |
GCCTTTATTCATTCTTGATG+TGG | - | chr7_3:43325775-43325794 | Msa1105150:intron | 35.0% | |
!! | ATCACTATTTCTAACCTGTG+TGG | - | chr7_3:43325800-43325819 | Msa1105150:intron | 35.0% |
ATGCTCATTCCAAATGCATT+TGG | - | chr7_3:43325827-43325846 | Msa1105150:intron | 35.0% | |
AGGAATGATCCAAATGCATT+TGG | + | chr7_3:43325839-43325858 | None:intergenic | 35.0% | |
!!! | GTCAATATTTTAGCAAGCTC+TGG | - | chr7_3:43325967-43325986 | Msa1105150:intron | 35.0% |
ACTTCTCAAATTCTCAGCAT+CGG | + | chr7_3:43326091-43326110 | None:intergenic | 35.0% | |
TAAGGAACAGCTTCGAATAA+CGG | + | chr7_3:43326129-43326148 | None:intergenic | 35.0% | |
! | CGAGTGTTATCATTTTCTTG+AGG | - | chr7_3:43326185-43326204 | Msa1105150:intron | 35.0% |
TCCTCATCTTTACCTAAAAC+CGG | + | chr7_3:43326322-43326341 | None:intergenic | 35.0% | |
CTCCTTATTGAATCGGAATT+AGG | + | chr7_3:43326420-43326439 | None:intergenic | 35.0% | |
CGTAGATCATATGTTTGAAG+TGG | + | chr7_3:43326462-43326481 | None:intergenic | 35.0% | |
ACAACGGTGAAAATATGGAA+TGG | - | chr7_3:43326665-43326684 | Msa1105150:CDS | 35.0% | |
CTCTCATATACTGCTATAGT+AGG | - | chr7_3:43326756-43326775 | Msa1105150:intron | 35.0% | |
ATGCTCCCTTAAAAGAAGAA+AGG | + | chr7_3:43326986-43327005 | None:intergenic | 35.0% | |
! | TAGTTTGGAATCGGTCTTTA+TGG | + | chr7_3:43327200-43327219 | None:intergenic | 35.0% |
ACTAATTCCATTCTTCACTC+AGG | - | chr7_3:43327216-43327235 | Msa1105150:intron | 35.0% | |
! | TAGTTTGGAATCGGTCTTTA+TGG | + | chr7_3:43327200-43327219 | None:intergenic | 35.0% |
! | ATGTCAGCTGAGTAGTTTTT+AGG | + | chr7_3:43327309-43327328 | None:intergenic | 35.0% |
TCTTCCAAAACATTAACCAC+TGG | - | chr7_3:43327380-43327399 | Msa1105150:intron | 35.0% | |
CAGTTTCACATAACCAATCT+AGG | + | chr7_3:43327417-43327436 | None:intergenic | 35.0% | |
! | AAATGCAGTGTGATAATGTG+TGG | - | chr7_3:43327654-43327673 | Msa1105150:intron | 35.0% |
GTACAGGTATTACCTATCAT+TGG | - | chr7_3:43327684-43327703 | Msa1105150:intron | 35.0% | |
! | TGTTGTTGATTAAATCGACC+GGG | + | chr7_3:43327792-43327811 | None:intergenic | 35.0% |
TCAACATTATGTTACGACGA+GGG | + | chr7_3:43327851-43327870 | None:intergenic | 35.0% | |
AAGACTGGATGTTGAAAGAA+CGG | + | chr7_3:43327899-43327918 | None:intergenic | 35.0% | |
TCTTTCAACATCCAGTCTTT+AGG | - | chr7_3:43327900-43327919 | Msa1105150:CDS | 35.0% | |
! | AATTTACAGCTGAAGCACTT+GGG | - | chr7_3:43327931-43327950 | Msa1105150:five_prime_UTR | 35.0% |
GAAGGCAGAGATAGAGAATT+TGG | + | chr7_3:43321698-43321717 | None:intergenic | 40.0% | |
CTATCTCTGCCTTCAGAAAA+TGG | - | chr7_3:43321704-43321723 | Msa1105150:CDS | 40.0% | |
CTTCATGTTCATCGTGATCA+AGG | + | chr7_3:43321749-43321768 | None:intergenic | 40.0% | |
CGCAACAACAAAAGGAATCT+GGG | + | chr7_3:43321779-43321798 | None:intergenic | 40.0% | |
ACGCAACAACAAAAGGAATC+TGG | + | chr7_3:43321780-43321799 | None:intergenic | 40.0% | |
CAGACAAACGCAACAACAAA+AGG | + | chr7_3:43321787-43321806 | None:intergenic | 40.0% | |
ACGAGTCACATTACATTCTG+GGG | + | chr7_3:43322238-43322257 | None:intergenic | 40.0% | |
AAATTGGCACCTGAAGGATT+CGG | + | chr7_3:43322432-43322451 | None:intergenic | 40.0% | |
TTAGTCCATATAGAGCTTGG+TGG | - | chr7_3:43322459-43322478 | Msa1105150:intron | 40.0% | |
TAGTCCATATAGAGCTTGGT+GGG | - | chr7_3:43322460-43322479 | Msa1105150:intron | 40.0% | |
TGATCAAGAATTGTTCACCC+AGG | - | chr7_3:43322541-43322560 | Msa1105150:intron | 40.0% | |
TTCACCCAGGAATCGAATTT+GGG | - | chr7_3:43322554-43322573 | Msa1105150:intron | 40.0% | |
! | GGTAATCTTGCTGGTTGATA+TGG | - | chr7_3:43322600-43322619 | Msa1105150:intron | 40.0% |
TGAACGTGTTAGTAGTGTGA+TGG | - | chr7_3:43322842-43322861 | Msa1105150:intron | 40.0% | |
ATGACCACAAGCTGCAAAAA+TGG | + | chr7_3:43322886-43322905 | None:intergenic | 40.0% | |
GTCCTTCTATTGTAAGCAAC+AGG | + | chr7_3:43323041-43323060 | None:intergenic | 40.0% | |
AGACATACCAAGGGTTTGAT+TGG | + | chr7_3:43323063-43323082 | None:intergenic | 40.0% | |
TGCTAAAAGACACCACCAAA+GGG | + | chr7_3:43323313-43323332 | None:intergenic | 40.0% | |
TTGCTAAAAGACACCACCAA+AGG | + | chr7_3:43323314-43323333 | None:intergenic | 40.0% | |
! | TTTTAGCAAGTCACACCTCA+AGG | - | chr7_3:43323325-43323344 | Msa1105150:intron | 40.0% |
! | CTACAAGACACCTTTTGTGA+AGG | + | chr7_3:43323453-43323472 | None:intergenic | 40.0% |
! | TTTTGTTACAAGCCACCCTT+TGG | + | chr7_3:43323716-43323735 | None:intergenic | 40.0% |
CTTAGAGTCTCTTTCCAGTT+AGG | + | chr7_3:43323818-43323837 | None:intergenic | 40.0% | |
CTAACTGGAAAGAGACTCTA+AGG | - | chr7_3:43323816-43323835 | Msa1105150:intron | 40.0% | |
AGGCCTTCATATGTGTGAAA+TGG | - | chr7_3:43323889-43323908 | Msa1105150:intron | 40.0% | |
CCACCATTTCACACATATGA+AGG | + | chr7_3:43323895-43323914 | None:intergenic | 40.0% | |
CCTTCATATGTGTGAAATGG+TGG | - | chr7_3:43323892-43323911 | Msa1105150:intron | 40.0% | |
TCAACAAAGGCCATATCTCT+AGG | + | chr7_3:43323934-43323953 | None:intergenic | 40.0% | |
! | GAAGGCGGAATTTTCAACAA+AGG | + | chr7_3:43323947-43323966 | None:intergenic | 40.0% |
TGAAAATTCCGCCTTCATTG+TGG | - | chr7_3:43323951-43323970 | Msa1105150:intron | 40.0% | |
!! | GAACAGAATGAAGGTGTTTG+AGG | + | chr7_3:43324018-43324037 | None:intergenic | 40.0% |
!! | TTCATTCTGTTCGGTGTGAA+GGG | - | chr7_3:43324026-43324045 | Msa1105150:intron | 40.0% |
ATTACACAGGCCATATCTCT+AGG | + | chr7_3:43324072-43324091 | None:intergenic | 40.0% | |
CTAACTCAACCTTGCAAAAC+CGG | + | chr7_3:43324130-43324149 | None:intergenic | 40.0% | |
ATAAGATTAACTGCGTCTCC+TGG | - | chr7_3:43324174-43324193 | Msa1105150:intron | 40.0% | |
TGTTTCATGCATACTGCTTG+AGG | - | chr7_3:43324314-43324333 | Msa1105150:intron | 40.0% | |
GTTTCATGCATACTGCTTGA+GGG | - | chr7_3:43324315-43324334 | Msa1105150:intron | 40.0% | |
CTAGAAGGTGATGTTGAGAA+AGG | + | chr7_3:43324357-43324376 | None:intergenic | 40.0% | |
TGTGTCGAGATCAAATTGAG+GGG | + | chr7_3:43324493-43324512 | None:intergenic | 40.0% | |
CATGTGTCGAGATCAAATTG+AGG | + | chr7_3:43324495-43324514 | None:intergenic | 40.0% | |
TTATCGTAGAGGAGGAAGAA+GGG | + | chr7_3:43324551-43324570 | None:intergenic | 40.0% | |
TTTATCGTAGAGGAGGAAGA+AGG | + | chr7_3:43324552-43324571 | None:intergenic | 40.0% | |
TTCCTCCTCTACGATAAATC+TGG | - | chr7_3:43324554-43324573 | Msa1105150:CDS | 40.0% | |
ATCCAGATTTATCGTAGAGG+AGG | + | chr7_3:43324559-43324578 | None:intergenic | 40.0% | |
GGAATCCAGATTTATCGTAG+AGG | + | chr7_3:43324562-43324581 | None:intergenic | 40.0% | |
TGTCGGAACTTCTGAATGTA+TGG | - | chr7_3:43324593-43324612 | Msa1105150:CDS | 40.0% | |
GAAGGAGAACCTGAAATTAC+TGG | - | chr7_3:43324636-43324655 | Msa1105150:CDS | 40.0% | |
ACTCGAGTACCAGTAATTTC+AGG | + | chr7_3:43324648-43324667 | None:intergenic | 40.0% | |
!! | TGAAGAAAAAGCATTGCCTC+AGG | - | chr7_3:43324668-43324687 | Msa1105150:CDS | 40.0% |
CATCCTGTAGTTCTTCATTG+CGG | - | chr7_3:43324759-43324778 | Msa1105150:intron | 40.0% | |
TGTCAAATTCCACATCCAAG+AGG | - | chr7_3:43324951-43324970 | Msa1105150:CDS | 40.0% | |
AGGATTTCCGAAAGTCTGTT+TGG | - | chr7_3:43324971-43324990 | Msa1105150:intron | 40.0% | |
!!! | GGAGTTTGATCACTTTTTGG+AGG | - | chr7_3:43324992-43325011 | Msa1105150:CDS | 40.0% |
GTTCTCTGTGCATATTCTTC+AGG | + | chr7_3:43325026-43325045 | None:intergenic | 40.0% | |
CTTAAGTGCAAATGCTAGCA+AGG | + | chr7_3:43325248-43325267 | None:intergenic | 40.0% | |
ATCCTTGTGGAACAGTTTCA+GGG | + | chr7_3:43325313-43325332 | None:intergenic | 40.0% | |
AATCCTTGTGGAACAGTTTC+AGG | + | chr7_3:43325314-43325333 | None:intergenic | 40.0% | |
! | ATAACACTATCTCCCCCTTT+TGG | + | chr7_3:43325512-43325531 | None:intergenic | 40.0% |
TTTGGATTAAGGCCCAACAT+AGG | + | chr7_3:43325700-43325719 | None:intergenic | 40.0% | |
!! | CTATTTCTAACCTGTGTGGA+TGG | - | chr7_3:43325804-43325823 | Msa1105150:intron | 40.0% |
AAGGAACAGCTTCGAATAAC+GGG | + | chr7_3:43326128-43326147 | None:intergenic | 40.0% | |
CGAAGCTGTTCCTTAAATTC+TGG | - | chr7_3:43326134-43326153 | Msa1105150:intron | 40.0% | |
AGAATCCAGATAAGGAGACT+AGG | + | chr7_3:43326236-43326255 | None:intergenic | 40.0% | |
!!! | TCCGGTTTTAGGTAAAGATG+AGG | - | chr7_3:43326318-43326337 | Msa1105150:intron | 40.0% |
CGGTAACAACGGTGAAAATA+TGG | - | chr7_3:43326660-43326679 | Msa1105150:CDS | 40.0% | |
!! | GAGTTGGTTGTGACTTTTGT+GGG | - | chr7_3:43326719-43326738 | Msa1105150:CDS | 40.0% |
! | AGTTGGTTGTGACTTTTGTG+GGG | - | chr7_3:43326720-43326739 | Msa1105150:CDS | 40.0% |
TACCTGTCTAGTATGAAGCA+GGG | + | chr7_3:43326795-43326814 | None:intergenic | 40.0% | |
AGCATGCATTTAACAAGGAC+AGG | + | chr7_3:43326838-43326857 | None:intergenic | 40.0% | |
!! | TCTACTATGACTCGGTTGAA+AGG | - | chr7_3:43327159-43327178 | Msa1105150:intron | 40.0% |
! | TGTGCCAGTGGTTAATGTTT+TGG | + | chr7_3:43327387-43327406 | None:intergenic | 40.0% |
! | AATGTGTGGCTTGTATGTAC+AGG | - | chr7_3:43327668-43327687 | Msa1105150:intron | 40.0% |
ATTAAATCGACCGGGAAGTT+TGG | + | chr7_3:43327784-43327803 | None:intergenic | 40.0% | |
AAGCTTGAAACTGTGATCTG+AGG | + | chr7_3:43327817-43327836 | None:intergenic | 40.0% | |
CTCAACATTATGTTACGACG+AGG | + | chr7_3:43327852-43327871 | None:intergenic | 40.0% | |
CTCGTCGTAACATAATGTTG+AGG | - | chr7_3:43327850-43327869 | Msa1105150:CDS | 40.0% | |
ATAATGTTGAGGCTGATCAC+TGG | - | chr7_3:43327861-43327880 | Msa1105150:CDS | 40.0% | |
! | GAATTTACAGCTGAAGCACT+TGG | - | chr7_3:43327930-43327949 | Msa1105150:five_prime_UTR | 40.0% |
TTGTAGCATCAGGTTCATCT+TGG | + | chr7_3:43327980-43327999 | None:intergenic | 40.0% | |
TCTAGGCTAGAAACCCACAT+GGG | - | chr7_3:43322344-43322363 | Msa1105150:intron | 45.0% | |
CAATCCCACCAAGCTCTATA+TGG | + | chr7_3:43322467-43322486 | None:intergenic | 45.0% | |
! | CATATAGAGCTTGGTGGGAT+TGG | - | chr7_3:43322465-43322484 | Msa1105150:intron | 45.0% |
GGTCAAAGGACCAACTAATC+CGG | + | chr7_3:43322494-43322513 | None:intergenic | 45.0% | |
!! | GGATTAGTTGGTCCTTTGAC+CGG | - | chr7_3:43322493-43322512 | Msa1105150:intron | 45.0% |
GTTCACCCAGGAATCGAATT+TGG | - | chr7_3:43322553-43322572 | Msa1105150:intron | 45.0% | |
AGAGCCCAAATTCGATTCCT+GGG | + | chr7_3:43322561-43322580 | None:intergenic | 45.0% | |
!!! | GATGCTGGTTTTGGACATGT+TGG | - | chr7_3:43322671-43322690 | Msa1105150:intron | 45.0% |
!! | TCCTCCATTTTTGCAGCTTG+TGG | - | chr7_3:43322879-43322898 | Msa1105150:intron | 45.0% |
ACCACAAGCTGCAAAAATGG+AGG | + | chr7_3:43322883-43322902 | None:intergenic | 45.0% | |
!! | GTGGTCATATGTGCTGTTTC+TGG | - | chr7_3:43322898-43322917 | Msa1105150:intron | 45.0% |
! | GAAGCATTTGGCAGACTGTT+GGG | + | chr7_3:43322995-43323014 | None:intergenic | 45.0% |
! | TGAAGCATTTGGCAGACTGT+TGG | + | chr7_3:43322996-43323015 | None:intergenic | 45.0% |
AGAAGGACCAATCAAACCCT+TGG | - | chr7_3:43323053-43323072 | Msa1105150:intron | 45.0% | |
! | TTTTGCTACAAGCCACCCTT+TGG | - | chr7_3:43323295-43323314 | Msa1105150:intron | 45.0% |
TAAAAGACACCACCAAAGGG+TGG | + | chr7_3:43323701-43323720 | None:intergenic | 45.0% | |
TAAAAGACACCACCAAAGGG+TGG | - | chr7_3:43323701-43323720 | Msa1105150:intron | 45.0% | |
CAAGCAAGAGATGTCCTAAC+TGG | - | chr7_3:43323801-43323820 | Msa1105150:intron | 45.0% | |
GGCCATATCTCTAGGCAATA+TGG | + | chr7_3:43323926-43323945 | None:intergenic | 45.0% | |
AACCCAGATGTCGCAATTAG+GGG | + | chr7_3:43323982-43324001 | None:intergenic | 45.0% | |
CAACCCAGATGTCGCAATTA+GGG | + | chr7_3:43323983-43324002 | None:intergenic | 45.0% | |
CTTCACACCGAACAGAATGA+AGG | + | chr7_3:43324027-43324046 | None:intergenic | 45.0% | |
!! | CTTCATTCTGTTCGGTGTGA+AGG | - | chr7_3:43324025-43324044 | Msa1105150:intron | 45.0% |
!! | TCATTCTGTTCGGTGTGAAG+GGG | - | chr7_3:43324027-43324046 | Msa1105150:intron | 45.0% |
TCCCACATTGCCTAGAGATA+TGG | - | chr7_3:43324059-43324078 | Msa1105150:intron | 45.0% | |
GCCATATCTCTAGGCAATGT+GGG | + | chr7_3:43324063-43324082 | None:intergenic | 45.0% | |
!! | AAAACCGGCTTGTAAGGTGA+AGG | + | chr7_3:43324115-43324134 | None:intergenic | 45.0% |
! | CGGTTTTGCAAGGTTGAGTT+AGG | - | chr7_3:43324128-43324147 | Msa1105150:intron | 45.0% |
AAGGTGATGTTGAGAAAGGG+AGG | + | chr7_3:43324353-43324372 | None:intergenic | 45.0% | |
GATTCCAACTCCAGCAATGT+CGG | - | chr7_3:43324576-43324595 | Msa1105150:CDS | 45.0% | |
TTCAGAAGTTCCGACATTGC+TGG | + | chr7_3:43324589-43324608 | None:intergenic | 45.0% | |
TCTGAATGTATGGACCAACC+TGG | - | chr7_3:43324603-43324622 | Msa1105150:CDS | 45.0% | |
CTGAATGTATGGACCAACCT+GGG | - | chr7_3:43324604-43324623 | Msa1105150:CDS | 45.0% | |
CACATTGTACACATCACGTC+AGG | + | chr7_3:43324723-43324742 | None:intergenic | 45.0% | |
TGACCGCAATGAAGAACTAC+AGG | + | chr7_3:43324765-43324784 | None:intergenic | 45.0% | |
GTAGTTCTTCATTGCGGTCA+TGG | - | chr7_3:43324765-43324784 | Msa1105150:intron | 45.0% | |
TTCGGAAATCCTCTTGGATG+TGG | + | chr7_3:43324963-43324982 | None:intergenic | 45.0% | |
CAGACTTTCGGAAATCCTCT+TGG | + | chr7_3:43324969-43324988 | None:intergenic | 45.0% | |
TCAGGGCAATATCGTTCTGT+AGG | + | chr7_3:43325296-43325315 | None:intergenic | 45.0% | |
! | CGTAGGAGTTCTAATCCTTG+TGG | + | chr7_3:43325326-43325345 | None:intergenic | 45.0% |
!! | AGCATCGGCTATAAGAGAGT+AGG | + | chr7_3:43326076-43326095 | None:intergenic | 45.0% |
CAGATAAGGAGACTAGGACA+CGG | + | chr7_3:43326230-43326249 | None:intergenic | 45.0% | |
!! | TCGAAAGCTCACTTTGGAGT+TGG | - | chr7_3:43326703-43326722 | Msa1105150:CDS | 45.0% |
!! | GGAGTTGGTTGTGACTTTTG+TGG | - | chr7_3:43326718-43326737 | Msa1105150:CDS | 45.0% |
ACCTGTCTAGTATGAAGCAG+GGG | + | chr7_3:43326794-43326813 | None:intergenic | 45.0% | |
CTACCTGTCTAGTATGAAGC+AGG | + | chr7_3:43326796-43326815 | None:intergenic | 45.0% | |
! | CAGGTAGTCATCGTTTTACG+CGG | - | chr7_3:43326809-43326828 | Msa1105150:intron | 45.0% |
ATTATGTTACGACGAGGGTC+AGG | + | chr7_3:43327846-43327865 | None:intergenic | 45.0% | |
GCTGATCACTGGACAGTTAA+GGG | - | chr7_3:43327872-43327891 | Msa1105150:CDS | 45.0% | |
! | GAAGCACTTGGGTTGTTTGA+TGG | - | chr7_3:43327942-43327961 | Msa1105150:five_prime_UTR | 45.0% |
!!! | AAATTATTTTATCTATTTAT+TGG | - | chr7_3:43324399-43324418 | Msa1105150:intron | 5.0% |
!!! | AATTATTTTATCTATTTATT+GGG | - | chr7_3:43324400-43324419 | Msa1105150:intron | 5.0% |
!! | TAAATATAAAAAGAATTTAA+AGG | + | chr7_3:43327580-43327599 | None:intergenic | 5.0% |
TTCCTAGGGGAAAGAGGCTT+TGG | - | chr7_3:43322289-43322308 | Msa1105150:intron | 50.0% | |
TACCAAAGCCTCTTTCCCCT+AGG | + | chr7_3:43322294-43322313 | None:intergenic | 50.0% | |
GTCTAGGCTAGAAACCCACA+TGG | - | chr7_3:43322343-43322362 | Msa1105150:intron | 50.0% | |
! | CTTGAGAGGAGCACACTCTA+AGG | + | chr7_3:43322395-43322414 | None:intergenic | 50.0% |
CTTAGAGTGTGCTCCTCTCA+AGG | - | chr7_3:43322393-43322412 | Msa1105150:intron | 50.0% | |
ACTTGAGCTGAGACCTTGAG+AGG | + | chr7_3:43322409-43322428 | None:intergenic | 50.0% | |
AGCTCAAGTCCGAATCCTTC+AGG | - | chr7_3:43322420-43322439 | Msa1105150:intron | 50.0% | |
!! | GGATTGGTCTCCGGATTAGT+TGG | - | chr7_3:43322481-43322500 | Msa1105150:intron | 50.0% |
GAGAGCCCAAATTCGATTCC+TGG | + | chr7_3:43322562-43322581 | None:intergenic | 50.0% | |
TGTTACAAGCCACCCTTTGG+TGG | + | chr7_3:43323713-43323732 | None:intergenic | 50.0% | |
ACCCAGATGTCGCAATTAGG+GGG | + | chr7_3:43323981-43324000 | None:intergenic | 50.0% | |
GCAACCCAGATGTCGCAATT+AGG | + | chr7_3:43323984-43324003 | None:intergenic | 50.0% | |
! | GGTGTTTGAGGCTGCAACAA+AGG | + | chr7_3:43324006-43324025 | None:intergenic | 50.0% |
GGCCATATCTCTAGGCAATG+TGG | + | chr7_3:43324064-43324083 | None:intergenic | 50.0% | |
!! | CCTTGCAAAACCGGCTTGTA+AGG | + | chr7_3:43324121-43324140 | None:intergenic | 50.0% |
!! | CCTTACAAGCCGGTTTTGCA+AGG | - | chr7_3:43324118-43324137 | Msa1105150:intron | 50.0% |
AGTTCCGACATTGCTGGAGT+TGG | + | chr7_3:43324583-43324602 | None:intergenic | 50.0% | |
TGCCCTGAAACTGTTCCACA+AGG | - | chr7_3:43325308-43325327 | Msa1105150:intron | 50.0% | |
AAGAGTCAAGCTCCCAGCTA+TGG | - | chr7_3:43325564-43325583 | Msa1105150:intron | 50.0% | |
GAATGAGCATCCATCCACAC+AGG | + | chr7_3:43325817-43325836 | None:intergenic | 50.0% | |
CGTGTCCTAGTCTCCTTATC+TGG | - | chr7_3:43326228-43326247 | Msa1105150:intron | 50.0% | |
! | CCAAAGTGAGCTTTCGAGTC+AGG | + | chr7_3:43326700-43326719 | None:intergenic | 50.0% |
! | CCTGACTCGAAAGCTCACTT+TGG | - | chr7_3:43326697-43326716 | Msa1105150:CDS | 50.0% |
TCCCCTGCTTCATACTAGAC+AGG | - | chr7_3:43326790-43326809 | Msa1105150:intron | 50.0% | |
! | GCAGTGGCTCTACTATGACT+CGG | - | chr7_3:43327151-43327170 | Msa1105150:intron | 50.0% |
GGCACACACATTCCCTAGAT+TGG | - | chr7_3:43327401-43327420 | Msa1105150:intron | 50.0% | |
GGCTGATCACTGGACAGTTA+AGG | - | chr7_3:43327871-43327890 | Msa1105150:CDS | 50.0% | |
! | GCACTTGGGTTGTTTGATGG+TGG | - | chr7_3:43327945-43327964 | Msa1105150:five_prime_UTR | 50.0% |
TGCTAACCCTCGCGTTCCTA+GGG | - | chr7_3:43322275-43322294 | Msa1105150:intron | 55.0% | |
TCTTTCCCCTAGGAACGCGA+GGG | + | chr7_3:43322284-43322303 | None:intergenic | 55.0% | |
GGCTAGAAACCCACATGGGT+TGG | - | chr7_3:43322348-43322367 | Msa1105150:intron | 55.0% | |
ACAACGAGGCCAACCCATGT+GGG | + | chr7_3:43322360-43322379 | None:intergenic | 55.0% | |
!! | ATGGGTTGGCCTCGTTGTGT+AGG | - | chr7_3:43322362-43322381 | Msa1105150:intron | 55.0% |
GGTCTCAAGCCTACACAACG+AGG | + | chr7_3:43322374-43322393 | None:intergenic | 55.0% | |
!! | AGCTTGGTGGGATTGGTCTC+CGG | - | chr7_3:43322472-43322491 | Msa1105150:intron | 55.0% |
TGCTACAAGCCACCCTTTGG+TGG | - | chr7_3:43323298-43323317 | Msa1105150:intron | 55.0% | |
AGATGTCGCAATTAGGGGGC+GGG | + | chr7_3:43323977-43323996 | None:intergenic | 55.0% | |
CAGATGTCGCAATTAGGGGG+CGG | + | chr7_3:43323978-43323997 | None:intergenic | 55.0% | |
GCCCCCTAATTGCGACATCT+GGG | - | chr7_3:43323977-43323996 | Msa1105150:intron | 55.0% | |
GCAGCCTTCACCTTACAAGC+CGG | - | chr7_3:43324108-43324127 | Msa1105150:intron | 55.0% | |
CTTCATGGGAAGACCCAGGT+TGG | + | chr7_3:43324620-43324639 | None:intergenic | 55.0% | |
CAACCTGGGTCTTCCCATGA+AGG | - | chr7_3:43324618-43324637 | Msa1105150:CDS | 55.0% | |
TCTCCTTCATGGGAAGACCC+AGG | + | chr7_3:43324624-43324643 | None:intergenic | 55.0% | |
CTAGGGAATGTGTGTGCCAG+TGG | + | chr7_3:43327399-43327418 | None:intergenic | 55.0% | |
GACAGTCGCTCCAAACTTCC+CGG | - | chr7_3:43327771-43327790 | Msa1105150:intron | 55.0% | |
GTGCTAACCCTCGCGTTCCT+AGG | - | chr7_3:43322274-43322293 | Msa1105150:intron | 60.0% | |
GCTAACCCTCGCGTTCCTAG+GGG | - | chr7_3:43322276-43322295 | Msa1105150:intron | 60.0% | |
CTCTTTCCCCTAGGAACGCG+AGG | + | chr7_3:43322285-43322304 | None:intergenic | 60.0% | |
CTCGCGTTCCTAGGGGAAAG+AGG | - | chr7_3:43322283-43322302 | Msa1105150:intron | 60.0% | |
CACAACGAGGCCAACCCATG+TGG | + | chr7_3:43322361-43322380 | None:intergenic | 60.0% | |
CGCCCCCTAATTGCGACATC+TGG | - | chr7_3:43323976-43323995 | Msa1105150:intron | 60.0% | |
TAGGGGGCGGGCCACAATGA+AGG | + | chr7_3:43323965-43323984 | None:intergenic | 65.0% | |
GGGGCGGGCCACAATGAAGG+CGG | + | chr7_3:43323962-43323981 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 43321644 | 43328004 | 43321644 | ID=Msa1105150;Name=Msa1105150 |
chr7_3 | mRNA | 43321644 | 43328004 | 43321644 | ID=Msa1105150-mRNA-1;Parent=Msa1105150;Name=Msa1105150-mRNA-1;_AED=0.16;_eAED=0.16;_QI=79|0.71|0.62|1|0.42|0.5|8|0|389 |
chr7_3 | exon | 43321644 | 43321913 | 43321644 | ID=Msa1105150-mRNA-1:exon:8890;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43322907 | 43323001 | 43322907 | ID=Msa1105150-mRNA-1:exon:8889;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43324550 | 43324753 | 43324550 | ID=Msa1105150-mRNA-1:exon:8888;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43324862 | 43324975 | 43324862 | ID=Msa1105150-mRNA-1:exon:8887;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43324991 | 43325185 | 43324991 | ID=Msa1105150-mRNA-1:exon:8886;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43326574 | 43326753 | 43326574 | ID=Msa1105150-mRNA-1:exon:8885;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43326837 | 43326865 | 43326837 | ID=Msa1105150-mRNA-1:exon:8884;Parent=Msa1105150-mRNA-1 |
chr7_3 | exon | 43327843 | 43328004 | 43327843 | ID=Msa1105150-mRNA-1:exon:8883;Parent=Msa1105150-mRNA-1 |
chr7_3 | five_prime_UTR | 43327926 | 43328004 | 43327926 | ID=Msa1105150-mRNA-1:five_prime_utr;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43327843 | 43327925 | 43327843 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43326837 | 43326865 | 43326837 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43326574 | 43326753 | 43326574 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43324991 | 43325185 | 43324991 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43324862 | 43324975 | 43324862 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43324550 | 43324753 | 43324550 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43322907 | 43323001 | 43322907 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
chr7_3 | CDS | 43321644 | 43321913 | 43321644 | ID=Msa1105150-mRNA-1:cds;Parent=Msa1105150-mRNA-1 |
Gene Sequence |
Protein sequence |