Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109020 | XP_013449185.1 | 90.347 | 404 | 11 | 2 | 1 | 403 | 1 | 377 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109020 | sp|Q38833|CHLG_ARATH | 86.944 | 337 | 43 | 1 | 67 | 403 | 52 | 387 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109020 | A0A072U0L0 | 90.347 | 404 | 11 | 2 | 1 | 403 | 1 | 377 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1025040 | Msa1109020 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa1063590 | Msa1109020 | 0.843206 | 1.615420e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109020 | MtrunA17_Chr7g0242831 | 90.347 | 404 | 11 | 2 | 1 | 403 | 1 | 377 | 0.0 | 721 |
| Msa1109020 | MtrunA17_Chr7g0242901 | 100.000 | 30 | 0 | 0 | 81 | 110 | 9 | 38 | 7.48e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109020 | AT3G51820.1 | 86.944 | 337 | 43 | 1 | 67 | 403 | 52 | 387 | 0.0 | 589 |
Find 111 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGTCAACTTACTATTAA+AGG | 0.130805 | 7_3:-52322083 | None:intergenic |
| TTTAAAAGAACTACCTTTAA+AGG | 0.156078 | 7_3:-52326232 | None:intergenic |
| ATATTCTGCACCTCCTTTAA+AGG | 0.191744 | 7_3:+52326219 | Msa1109020:CDS |
| TAATCAGCTTCTTGGTATTA+AGG | 0.200101 | 7_3:+52322515 | Msa1109020:CDS |
| CGGCCGGTATATTGGATATA+TGG | 0.204836 | 7_3:+52326047 | Msa1109020:CDS |
| TGCAGGTAATCACTCAAATA+TGG | 0.218163 | 7_3:+52325999 | Msa1109020:intron |
| TGGGCTGGTCAGGCTTTGTT+TGG | 0.238526 | 7_3:+52326496 | Msa1109020:CDS |
| CTCGGTCATACCAATCATTC+AGG | 0.250216 | 7_3:-52325837 | None:intergenic |
| GAAGATGTTCTTGTTGTTAA+AGG | 0.253881 | 7_3:-52322022 | None:intergenic |
| TTCAATTAGGTGGGCTGGTC+AGG | 0.262337 | 7_3:+52326486 | Msa1109020:intron |
| TTCGTGAAATTCTTTCTAAC+TGG | 0.281945 | 7_3:-52328150 | None:intergenic |
| GTTTGTGGTGCTGCTGCTTC+AGG | 0.285887 | 7_3:+52325422 | Msa1109020:CDS |
| AAAGACTTGTGGAGCTATTA+AGG | 0.297487 | 7_3:-52327741 | None:intergenic |
| TAGTCTCTACCTGTTGCTTT+TGG | 0.303324 | 7_3:+52327134 | Msa1109020:intron |
| GGGCTGGTCAGGCTTTGTTT+GGG | 0.314315 | 7_3:+52326497 | Msa1109020:CDS |
| CGTTTATTGCGTCAATTTCT+CGG | 0.319378 | 7_3:-52325855 | None:intergenic |
| TCAAGCTTTAATCAGCTTCT+TGG | 0.331042 | 7_3:+52322507 | Msa1109020:CDS |
| AATCAGCTTCTTGGTATTAA+GGG | 0.331354 | 7_3:+52322516 | Msa1109020:CDS |
| CCAGAAGGAATTGGTCTATA+AGG | 0.345917 | 7_3:-52325880 | None:intergenic |
| ACTAATGGAGGCCAAGTTAC+AGG | 0.346875 | 7_3:-52325389 | None:intergenic |
| GGATAGAGCTCTAGGGCTTC+AGG | 0.357708 | 7_3:+52327011 | Msa1109020:CDS |
| GAAATATGATGTTAAATATC+AGG | 0.359336 | 7_3:+52327925 | Msa1109020:CDS |
| ACCTCTTCAGTTGTCTTCAA+TGG | 0.362543 | 7_3:+52321958 | Msa1109020:exon |
| CCTTATAGACCAATTCCTTC+TGG | 0.366717 | 7_3:+52325880 | Msa1109020:CDS |
| ATAATCTTGAGTCCCTTTCA+TGG | 0.368040 | 7_3:+52328450 | Msa1109020:three_prime_UTR |
| TTGGTTCTGAAACTGCAAAA+TGG | 0.382549 | 7_3:+52327153 | Msa1109020:CDS |
| CTATTAAAGGAAACAGAAAA+AGG | 0.387177 | 7_3:-52322070 | None:intergenic |
| CAATCTTCTCTTGCCCACTT+AGG | 0.390501 | 7_3:+52328301 | Msa1109020:three_prime_UTR |
| CAAACTACACCCCACACTAA+TGG | 0.406437 | 7_3:-52325404 | None:intergenic |
| GATATTGCACCAGAAGGAAT+TGG | 0.406466 | 7_3:-52325889 | None:intergenic |
| TTCTTTGTTTGGTGTTTATG+TGG | 0.411432 | 7_3:+52322281 | Msa1109020:CDS |
| TAAATCTGAGGCACCGGATA+AGG | 0.412436 | 7_3:+52322467 | Msa1109020:CDS |
| ATGGCACACATCTTTAACTT+AGG | 0.420418 | 7_3:-52328227 | None:intergenic |
| TTAAAACAAAATGGATGGAT+TGG | 0.422434 | 7_3:+52326326 | Msa1109020:CDS |
| CTTCTAATAATATCAAATAA+AGG | 0.424851 | 7_3:-52328532 | None:intergenic |
| GGCCGGTATATTGGATATAT+GGG | 0.424933 | 7_3:+52326048 | Msa1109020:CDS |
| GTTGTTAAAGGTGTTATTGT+TGG | 0.425654 | 7_3:-52322010 | None:intergenic |
| AGGTAGAATAATCTTTCCTT+TGG | 0.427078 | 7_3:-52328512 | None:intergenic |
| GGGTGACAAACAATAAACTA+TGG | 0.428285 | 7_3:-52328246 | None:intergenic |
| ACATAAACAATTCCTTATCA+TGG | 0.429512 | 7_3:+52328417 | Msa1109020:three_prime_UTR |
| ATACTTATTAAACCATGATA+AGG | 0.444738 | 7_3:-52328429 | None:intergenic |
| CAAATATGGGTGCTACTACT+AGG | 0.446234 | 7_3:+52326013 | Msa1109020:CDS |
| AATGACTTCAAAAGTGTTGA+AGG | 0.449297 | 7_3:+52326988 | Msa1109020:CDS |
| AATGTATTGTGCAGAATATA+TGG | 0.451795 | 7_3:+52325342 | Msa1109020:intron |
| ATACTCCGGCTATGCTGTAT+AGG | 0.453639 | 7_3:-52326552 | None:intergenic |
| GTGTATATCCTGTCAGGAAT+GGG | 0.463167 | 7_3:-52325708 | None:intergenic |
| TTTGATAAGGAAATTTCCAT+TGG | 0.464597 | 7_3:+52325638 | Msa1109020:intron |
| AACTTGGCCTCCATTAGTGT+GGG | 0.467885 | 7_3:+52325394 | Msa1109020:CDS |
| AATTAGATAACCTTGTATGC+AGG | 0.468836 | 7_3:-52328267 | None:intergenic |
| TATTTAACATCATATTTCAC+AGG | 0.468965 | 7_3:-52327920 | None:intergenic |
| AACTTACAAAGCCTGTAACT+TGG | 0.479729 | 7_3:+52325378 | Msa1109020:CDS |
| TTACCTGTGTATATCCTGTC+AGG | 0.481823 | 7_3:-52325714 | None:intergenic |
| TGGATTGGAAACTTTGCCCT+TGG | 0.488058 | 7_3:+52326341 | Msa1109020:CDS |
| TGTTTGTCACCCTGCATACA+AGG | 0.490002 | 7_3:+52328257 | Msa1109020:three_prime_UTR |
| GTTTCAGAACCAAAAGCAAC+AGG | 0.491532 | 7_3:-52327143 | None:intergenic |
| GTTGAAGGGGATAGAGCTCT+AGG | 0.491845 | 7_3:+52327003 | Msa1109020:CDS |
| TGTGTATATCCTGTCAGGAA+TGG | 0.493799 | 7_3:-52325709 | None:intergenic |
| ATGGTTACAGGATATCTACT+TGG | 0.495779 | 7_3:+52327683 | Msa1109020:intron |
| TCTAGTTAAAACAAAATGGA+TGG | 0.499910 | 7_3:+52326321 | Msa1109020:intron |
| AGTAAAGCTAATGCGTAATA+CGG | 0.507815 | 7_3:-52327716 | None:intergenic |
| GCAGGTAATCACTCAAATAT+GGG | 0.509287 | 7_3:+52326000 | Msa1109020:intron |
| TGTGTCTATAAACCATGAAA+GGG | 0.516794 | 7_3:-52328462 | None:intergenic |
| GAAAGAATTTCACGAATTAG+CGG | 0.519672 | 7_3:+52328157 | Msa1109020:three_prime_UTR |
| CAGAATATATATACGACAGA+AGG | 0.520217 | 7_3:-52326204 | None:intergenic |
| AGCAGTTAAATCTGAGGCAC+CGG | 0.522661 | 7_3:+52322461 | Msa1109020:intron |
| CAAGTTACATTAGTTTGCCA+TGG | 0.527841 | 7_3:+52326366 | Msa1109020:CDS |
| CACCCATATATCCAATATAC+CGG | 0.528142 | 7_3:-52326050 | None:intergenic |
| TCGGTCATACCAATCATTCA+GGG | 0.530916 | 7_3:-52325836 | None:intergenic |
| TGGTTACAGGATATCTACTT+GGG | 0.533392 | 7_3:+52327684 | Msa1109020:intron |
| GTGTGTCTATAAACCATGAA+AGG | 0.534410 | 7_3:-52328463 | None:intergenic |
| TAACTTGGCCTCCATTAGTG+TGG | 0.535109 | 7_3:+52325393 | Msa1109020:CDS |
| ATGTCTGGCCCATTCCTGAC+AGG | 0.537234 | 7_3:+52325700 | Msa1109020:CDS |
| AAGTACAATTGTATAACGGA+TGG | 0.544800 | 7_3:-52328583 | None:intergenic |
| ACAGGATATCTACTTGGGGC+TGG | 0.545863 | 7_3:+52327689 | Msa1109020:intron |
| AACATGAACTTTAACTATGT+CGG | 0.548479 | 7_3:-52322235 | None:intergenic |
| ATTAGATAACCTTGTATGCA+GGG | 0.548906 | 7_3:-52328266 | None:intergenic |
| TATATCCAATATACCGGCCG+TGG | 0.550708 | 7_3:-52326044 | None:intergenic |
| CAACATCCTCAACGTTCCAA+TGG | 0.553343 | 7_3:-52325654 | None:intergenic |
| TTGAGGTCTTTGTATGCCAA+AGG | 0.561751 | 7_3:+52328496 | Msa1109020:three_prime_UTR |
| GACACACTTACTTAGTCTTG+AGG | 0.565356 | 7_3:+52328479 | Msa1109020:three_prime_UTR |
| TGGTGCAATATCTGAAAATG+AGG | 0.567288 | 7_3:+52325900 | Msa1109020:CDS |
| AAAAGAACTACCTTTAAAGG+AGG | 0.568625 | 7_3:-52326229 | None:intergenic |
| GCCATTGAAGACAACTGAAG+AGG | 0.571387 | 7_3:-52321959 | None:intergenic |
| AGTACAATTGTATAACGGAT+GGG | 0.574011 | 7_3:-52328582 | None:intergenic |
| AACTAATGTAACTTGCTCCA+AGG | 0.574854 | 7_3:-52326358 | None:intergenic |
| ATTACACAATTATCTGTCGC+TGG | 0.577211 | 7_3:+52327197 | Msa1109020:CDS |
| ATGACTTCAAAAGTGTTGAA+GGG | 0.578084 | 7_3:+52326989 | Msa1109020:CDS |
| CGGTATATTGGATATATGGG+TGG | 0.579306 | 7_3:+52326051 | Msa1109020:CDS |
| TTAGTGTGGGGTGTAGTTTG+TGG | 0.581268 | 7_3:+52325407 | Msa1109020:CDS |
| CTAGGAGGTCTTACCACGGC+CGG | 0.583251 | 7_3:+52326031 | Msa1109020:CDS |
| ACTAATGTAACTTGCTCCAA+GGG | 0.583686 | 7_3:-52326357 | None:intergenic |
| TGACTTCAAAAGTGTTGAAG+GGG | 0.585088 | 7_3:+52326990 | Msa1109020:CDS |
| AAATTTCCATTGGAACGTTG+AGG | 0.585558 | 7_3:+52325648 | Msa1109020:CDS |
| ACACTCCTATACAGCATAGC+CGG | 0.592211 | 7_3:+52326547 | Msa1109020:CDS |
| GGTATATTGGATATATGGGT+GGG | 0.610480 | 7_3:+52326052 | Msa1109020:CDS |
| TTGAAGGGGATAGAGCTCTA+GGG | 0.614437 | 7_3:+52327004 | Msa1109020:CDS |
| GAAGGGATCCACCCAATGCA+AGG | 0.617051 | 7_3:-52326186 | None:intergenic |
| CGTGTCTTCAGTTCAGTGTG+TGG | 0.620541 | 7_3:+52321927 | Msa1109020:five_prime_UTR |
| AGTGTGAGAACAATAATGTC+TGG | 0.621424 | 7_3:-52326529 | None:intergenic |
| TGTTTGAGCAGTTAAATCTG+AGG | 0.624035 | 7_3:+52322455 | Msa1109020:intron |
| ATTTAACATCATATTTCACA+GGG | 0.625360 | 7_3:-52327919 | None:intergenic |
| GCTGAAACTGATGCAACTGA+AGG | 0.625565 | 7_3:+52322336 | Msa1109020:CDS |
| AGAATATATATACGACAGAA+GGG | 0.635614 | 7_3:-52326203 | None:intergenic |
| GTACAATTGTATAACGGATG+GGG | 0.641708 | 7_3:-52328581 | None:intergenic |
| ACTACACCCCACACTAATGG+AGG | 0.654210 | 7_3:-52325401 | None:intergenic |
| ACTGCAAAATGGATATGTGT+TGG | 0.658074 | 7_3:+52327164 | Msa1109020:CDS |
| GGTTACAGGATATCTACTTG+GGG | 0.668031 | 7_3:+52327685 | Msa1109020:intron |
| ATATGGGTGCTACTACTAGG+AGG | 0.679036 | 7_3:+52326016 | Msa1109020:CDS |
| ACTTGGCCTCCATTAGTGTG+GGG | 0.708420 | 7_3:+52325395 | Msa1109020:CDS |
| ATTCCTGACAGGATATACAC+AGG | 0.718157 | 7_3:+52325711 | Msa1109020:CDS |
| ACTACTAGGAGGTCTTACCA+CGG | 0.792284 | 7_3:+52326027 | Msa1109020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAGAACAAATTAAT+AGG | - | chr7_3:52325153-52325172 | None:intergenic | 10.0% |
| !! | GTAAAAAAAAAATGTTAATA+CGG | - | chr7_3:52327335-52327354 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324684-52324703 | None:intergenic | 100.0% |
| !!! | GTTTTTTTTTTTTTGTTGTT+GGG | + | chr7_3:52322358-52322377 | Msa1109020:intron | 15.0% |
| !!! | TTTTTCTAGTTAAAACAAAA+TGG | + | chr7_3:52326317-52326336 | Msa1109020:intron | 15.0% |
| !! | ATTTATTAGCATATATTTGA+GGG | - | chr7_3:52327234-52327253 | None:intergenic | 15.0% |
| !! | AATTTATTAGCATATATTTG+AGG | - | chr7_3:52327235-52327254 | None:intergenic | 15.0% |
| !!! | TAACATTAACTTGTTTAATA+TGG | + | chr7_3:52327368-52327387 | Msa1109020:intron | 15.0% |
| !! | CTTCTAATAATATCAAATAA+AGG | - | chr7_3:52328535-52328554 | None:intergenic | 15.0% |
| !! | TAAAGTCAACTTACTATTAA+AGG | - | chr7_3:52322086-52322105 | None:intergenic | 20.0% |
| !!! | ATTGAAAAGTACTTTCAAAA+GGG | - | chr7_3:52322161-52322180 | None:intergenic | 20.0% |
| !!! | AATTGAAAAGTACTTTCAAA+AGG | - | chr7_3:52322162-52322181 | None:intergenic | 20.0% |
| !!! | GGTTTTTTTTTTTTTGTTGT+TGG | + | chr7_3:52322357-52322376 | Msa1109020:intron | 20.0% |
| !!! | ACCATTTTGGAATTTATAAT+TGG | + | chr7_3:52322852-52322871 | Msa1109020:intron | 20.0% |
| !!! | CCATTTTGGAATTTATAATT+GGG | + | chr7_3:52322853-52322872 | Msa1109020:intron | 20.0% |
| !! | TTCATAATCAAATCAAATGA+GGG | - | chr7_3:52323286-52323305 | None:intergenic | 20.0% |
| !!! | AATTCTGAATATCAATTTTC+AGG | - | chr7_3:52323326-52323345 | None:intergenic | 20.0% |
| !! | AAAATTGATATTCAGAATTC+AGG | + | chr7_3:52323327-52323346 | Msa1109020:intron | 20.0% |
| !!! | ATGTTTTTATAAAACCCATA+AGG | + | chr7_3:52323665-52323684 | Msa1109020:intron | 20.0% |
| !!! | CTATTCATGTTTTCTAATTT+TGG | - | chr7_3:52323850-52323869 | None:intergenic | 20.0% |
| !! | ACAATATTGCGAATTTAATT+TGG | + | chr7_3:52325177-52325196 | Msa1109020:intron | 20.0% |
| !! | ACAAATAAACAAGTAACAAA+AGG | - | chr7_3:52325958-52325977 | None:intergenic | 20.0% |
| !! | TTTAAAAGAACTACCTTTAA+AGG | - | chr7_3:52326235-52326254 | None:intergenic | 20.0% |
| !! | AAAAGTAAATGAACATAACA+AGG | - | chr7_3:52326445-52326464 | None:intergenic | 20.0% |
| !!! | CATTGATTTCATTTTCAATT+AGG | + | chr7_3:52326473-52326492 | Msa1109020:intron | 20.0% |
| !! | AGTTTAAGAAAAAAAACTCA+TGG | - | chr7_3:52326820-52326839 | None:intergenic | 20.0% |
| !!! | TCACAACATTTTTTTTTTGA+AGG | - | chr7_3:52327533-52327552 | None:intergenic | 20.0% |
| !! | ATTTAACATCATATTTCACA+GGG | - | chr7_3:52327922-52327941 | None:intergenic | 20.0% |
| !! | TATTTAACATCATATTTCAC+AGG | - | chr7_3:52327923-52327942 | None:intergenic | 20.0% |
| !! | GAAATATGATGTTAAATATC+AGG | + | chr7_3:52327925-52327944 | Msa1109020:CDS | 20.0% |
| !! | AAATTATCAAAAACCTAAGT+GGG | - | chr7_3:52328317-52328336 | None:intergenic | 20.0% |
| !!! | TTTTGATAATTTCTAAGTTC+AGG | + | chr7_3:52328325-52328344 | Msa1109020:three_prime_UTR | 20.0% |
| !!! | TTGAGAAGAAGTTTATTTTT+AGG | + | chr7_3:52328348-52328367 | Msa1109020:three_prime_UTR | 20.0% |
| !!! | TACAATACATTTTGTACAAT+TGG | - | chr7_3:52328389-52328408 | None:intergenic | 20.0% |
| !! | ATACTTATTAAACCATGATA+AGG | - | chr7_3:52328432-52328451 | None:intergenic | 20.0% |
| ! | CTATTAAAGGAAACAGAAAA+AGG | - | chr7_3:52322073-52322092 | None:intergenic | 25.0% |
| ! | TTCAATTATCATGTCAAATG+TGG | + | chr7_3:52322175-52322194 | Msa1109020:intron | 25.0% |
| ! | AACATGAACTTTAACTATGT+CGG | - | chr7_3:52322238-52322257 | None:intergenic | 25.0% |
| !!! | GATGTTGATTTTTCTTTGTT+TGG | + | chr7_3:52322270-52322289 | Msa1109020:CDS | 25.0% |
| !!! | CAGTTTGAAGTTTTGTTTTT+TGG | + | chr7_3:52322431-52322450 | Msa1109020:intron | 25.0% |
| ! | TTTGTTTCCATTCTATGATT+TGG | + | chr7_3:52322581-52322600 | Msa1109020:intron | 25.0% |
| ! | TTCAAATCCAAATCATAGAA+TGG | - | chr7_3:52322591-52322610 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr7_3:52322673-52322692 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr7_3:52322674-52322693 | None:intergenic | 25.0% |
| ! | CCCAATTATAAATTCCAAAA+TGG | - | chr7_3:52322856-52322875 | None:intergenic | 25.0% |
| ! | TAAACTAGTGTTTATAAGTG+GGG | - | chr7_3:52322927-52322946 | None:intergenic | 25.0% |
| ! | CTAAACTAGTGTTTATAAGT+GGG | - | chr7_3:52322928-52322947 | None:intergenic | 25.0% |
| !!! | TGTCTAATTTGTTAACTTAG+AGG | + | chr7_3:52323023-52323042 | Msa1109020:intron | 25.0% |
| ! | ACATGAAAACTATAGAGATA+AGG | + | chr7_3:52323060-52323079 | Msa1109020:intron | 25.0% |
| ! | TTCAGAAAGGGAAATTATAT+AGG | - | chr7_3:52323200-52323219 | None:intergenic | 25.0% |
| ! | ATAGGTTTATTGTTCAGAAA+GGG | - | chr7_3:52323212-52323231 | None:intergenic | 25.0% |
| ! | TCATAATCAAATCAAATGAG+GGG | - | chr7_3:52323285-52323304 | None:intergenic | 25.0% |
| ! | GTTCATAATCAAATCAAATG+AGG | - | chr7_3:52323287-52323306 | None:intergenic | 25.0% |
| ! | AAACTTGGTTTCAAACTAAA+AGG | - | chr7_3:52323417-52323436 | None:intergenic | 25.0% |
| ! | CATTGTGTATGGATTTAAAT+TGG | - | chr7_3:52323773-52323792 | None:intergenic | 25.0% |
| ! | ATTAACATAATCTTATGCCA+GGG | - | chr7_3:52324061-52324080 | None:intergenic | 25.0% |
| ! | GCATAAGATTATGTTAATGT+AGG | + | chr7_3:52324063-52324082 | Msa1109020:intron | 25.0% |
| ! | CATAACAAGTTCAAAATTGA+TGG | - | chr7_3:52324379-52324398 | None:intergenic | 25.0% |
| ! | CTAAATCAATATGAAACACA+CGG | + | chr7_3:52324543-52324562 | Msa1109020:intron | 25.0% |
| ! | ATTTATGCTCATTGTAACAA+GGG | - | chr7_3:52324575-52324594 | None:intergenic | 25.0% |
| ! | TCTAATGAGGAATAAAAAGA+GGG | - | chr7_3:52324751-52324770 | None:intergenic | 25.0% |
| !!! | GAAATTTGCTAATGTTTTTC+CGG | - | chr7_3:52324868-52324887 | None:intergenic | 25.0% |
| !!! | ATCTATTAGGGAATTTTAAC+TGG | - | chr7_3:52324944-52324963 | None:intergenic | 25.0% |
| ! | CACTTAAACGTAATCTATTA+GGG | - | chr7_3:52324956-52324975 | None:intergenic | 25.0% |
| ! | AATGTATTGTGCAGAATATA+TGG | + | chr7_3:52325342-52325361 | Msa1109020:intron | 25.0% |
| ! | ATGGAAATTTCCTTATCAAA+GGG | - | chr7_3:52325638-52325657 | None:intergenic | 25.0% |
| ! | AATGGAAATTTCCTTATCAA+AGG | - | chr7_3:52325639-52325658 | None:intergenic | 25.0% |
| ! | TTTGATAAGGAAATTTCCAT+TGG | + | chr7_3:52325638-52325657 | Msa1109020:intron | 25.0% |
| !! | GTTTTATATTCCCATTCAAT+AGG | - | chr7_3:52325775-52325794 | None:intergenic | 25.0% |
| !!! | ATGCAAGGTAAAAAAGTATT+GGG | - | chr7_3:52326174-52326193 | None:intergenic | 25.0% |
| !! | AATGCAAGGTAAAAAAGTAT+TGG | - | chr7_3:52326175-52326194 | None:intergenic | 25.0% |
| !!! | AATACTTTTTTACCTTGCAT+TGG | + | chr7_3:52326174-52326193 | Msa1109020:CDS | 25.0% |
| !!! | ATACTTTTTTACCTTGCATT+GGG | + | chr7_3:52326175-52326194 | Msa1109020:CDS | 25.0% |
| ! | AGAATATATATACGACAGAA+GGG | - | chr7_3:52326206-52326225 | None:intergenic | 25.0% |
| ! | TCTAGTTAAAACAAAATGGA+TGG | + | chr7_3:52326321-52326340 | Msa1109020:intron | 25.0% |
| ! | TTAAAACAAAATGGATGGAT+TGG | + | chr7_3:52326326-52326345 | Msa1109020:CDS | 25.0% |
| !! | TGATTTCATTTTCAATTAGG+TGG | + | chr7_3:52326476-52326495 | Msa1109020:intron | 25.0% |
| !! | GATTTCATTTTCAATTAGGT+GGG | + | chr7_3:52326477-52326496 | Msa1109020:intron | 25.0% |
| ! | CTAAGCTACTTAACTAAATA+CGG | - | chr7_3:52326629-52326648 | None:intergenic | 25.0% |
| ! | CTTATTTCCATAAGCTAATT+AGG | - | chr7_3:52326775-52326794 | None:intergenic | 25.0% |
| ! | TTAGGAACAATGTTATTGAT+CGG | - | chr7_3:52326930-52326949 | None:intergenic | 25.0% |
| ! | GCAATGTAAAACAGAAAATT+AGG | - | chr7_3:52326948-52326967 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAGTCATTTACAA+TGG | - | chr7_3:52326983-52327002 | None:intergenic | 25.0% |
| ! | TAATCAAACAAGATTGTCAA+AGG | - | chr7_3:52327116-52327135 | None:intergenic | 25.0% |
| ! | TTAATGTTAATACAGTGACT+TGG | - | chr7_3:52327357-52327376 | None:intergenic | 25.0% |
| !! | AATATGGAGATCAACTTTTT+AGG | + | chr7_3:52327384-52327403 | Msa1109020:intron | 25.0% |
| ! | AAAAATGTTGTGATTGTAAC+AGG | + | chr7_3:52327540-52327559 | Msa1109020:intron | 25.0% |
| !! | CATTTCGGTGATTTTATATA+TGG | + | chr7_3:52327664-52327683 | Msa1109020:intron | 25.0% |
| !! | GTGATTTTATATATGGTTAC+AGG | + | chr7_3:52327671-52327690 | Msa1109020:intron | 25.0% |
| !!! | AAGTCTTTTTTCAGGTAAAA+TGG | + | chr7_3:52327756-52327775 | Msa1109020:intron | 25.0% |
| !! | ATAAATTTTCTTATGTTGCC+AGG | + | chr7_3:52328042-52328061 | Msa1109020:intron | 25.0% |
| ! | AACTTAGGTAACAAAAATCA+TGG | - | chr7_3:52328215-52328234 | None:intergenic | 25.0% |
| ! | GAAATTATCAAAAACCTAAG+TGG | - | chr7_3:52328318-52328337 | None:intergenic | 25.0% |
| ! | ACATAAACAATTCCTTATCA+TGG | + | chr7_3:52328417-52328436 | Msa1109020:three_prime_UTR | 25.0% |
| !! | GTTGTTAAAGGTGTTATTGT+TGG | - | chr7_3:52322013-52322032 | None:intergenic | 30.0% |
| !! | GAAGATGTTCTTGTTGTTAA+AGG | - | chr7_3:52322025-52322044 | None:intergenic | 30.0% |
| ACAGAAAAAGGTGACAAATA+TGG | - | chr7_3:52322061-52322080 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTTGGTGTTTATG+TGG | + | chr7_3:52322281-52322300 | Msa1109020:CDS | 30.0% |
| !!! | TTTTTTGTTGTTGGGTTTTG+TGG | + | chr7_3:52322366-52322385 | Msa1109020:intron | 30.0% |
| TAATCAGCTTCTTGGTATTA+AGG | + | chr7_3:52322515-52322534 | Msa1109020:CDS | 30.0% | |
| AATCAGCTTCTTGGTATTAA+GGG | + | chr7_3:52322516-52322535 | Msa1109020:CDS | 30.0% | |
| !! | TTTGACTTCAATTTTCGTTG+CGG | + | chr7_3:52322613-52322632 | Msa1109020:intron | 30.0% |
| AATTAAACTTTGACCCTGTT+TGG | + | chr7_3:52322657-52322676 | Msa1109020:intron | 30.0% | |
| !! | GTTGTTTTCATAAGTTATCC+TGG | + | chr7_3:52322780-52322799 | Msa1109020:intron | 30.0% |
| ! | TCACATATCTGATACCATTT+TGG | + | chr7_3:52322839-52322858 | Msa1109020:intron | 30.0% |
| AAACTAGTGTTTATAAGTGG+GGG | - | chr7_3:52322926-52322945 | None:intergenic | 30.0% | |
| CCTAAACTAGTGTTTATAAG+TGG | - | chr7_3:52322929-52322948 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACACTAGTTT+AGG | + | chr7_3:52322926-52322945 | Msa1109020:intron | 30.0% |
| GGTAGATAGAAAATCTACAT+AGG | - | chr7_3:52323138-52323157 | None:intergenic | 30.0% | |
| AAAGGGAAATTATATAGGAC+CGG | - | chr7_3:52323195-52323214 | None:intergenic | 30.0% | |
| GATAGGTTTATTGTTCAGAA+AGG | - | chr7_3:52323213-52323232 | None:intergenic | 30.0% | |
| TGAACAATAAACCTATCCAA+AGG | + | chr7_3:52323216-52323235 | Msa1109020:intron | 30.0% | |
| !!! | CTGAATATCAATTTTCAGGT+CGG | - | chr7_3:52323322-52323341 | None:intergenic | 30.0% |
| AAAACCCATAAGGTAACAAT+TGG | + | chr7_3:52323675-52323694 | Msa1109020:intron | 30.0% | |
| TCATCCAATTGTTACCTTAT+GGG | - | chr7_3:52323682-52323701 | None:intergenic | 30.0% | |
| ATCATCCAATTGTTACCTTA+TGG | - | chr7_3:52323683-52323702 | None:intergenic | 30.0% | |
| AAGGTAACAATTGGATGATA+AGG | + | chr7_3:52323684-52323703 | Msa1109020:intron | 30.0% | |
| TTAAATCCATACACAATGCA+AGG | + | chr7_3:52323775-52323794 | Msa1109020:intron | 30.0% | |
| TAAATCCATACACAATGCAA+GGG | + | chr7_3:52323776-52323795 | Msa1109020:intron | 30.0% | |
| !! | ATTTACCTTGTTGACTTGTT+GGG | - | chr7_3:52323898-52323917 | None:intergenic | 30.0% |
| TAAATGAACCTTACTCTGAT+GGG | + | chr7_3:52323913-52323932 | Msa1109020:intron | 30.0% | |
| GACCAGATATGAACATAAAA+GGG | + | chr7_3:52324013-52324032 | Msa1109020:intron | 30.0% | |
| ! | AACCCTTTTATGTTCATATC+TGG | - | chr7_3:52324018-52324037 | None:intergenic | 30.0% |
| CATTAACATAATCTTATGCC+AGG | - | chr7_3:52324062-52324081 | None:intergenic | 30.0% | |
| TCTTATACCAACTTGAGTAT+GGG | - | chr7_3:52324096-52324115 | None:intergenic | 30.0% | |
| TTCTTATACCAACTTGAGTA+TGG | - | chr7_3:52324097-52324116 | None:intergenic | 30.0% | |
| !!! | TTGGTATAAGAACTAGCTTT+TGG | + | chr7_3:52324105-52324124 | Msa1109020:intron | 30.0% |
| TAGCGTCCAATAAAAAATCT+AGG | + | chr7_3:52324190-52324209 | Msa1109020:intron | 30.0% | |
| AGCGTCCAATAAAAAATCTA+GGG | + | chr7_3:52324191-52324210 | Msa1109020:intron | 30.0% | |
| ! | TCCAATAAAAAATCTAGGGT+AGG | + | chr7_3:52324195-52324214 | Msa1109020:intron | 30.0% |
| TGTTCAAAATTACCGAAGTA+TGG | - | chr7_3:52324336-52324355 | None:intergenic | 30.0% | |
| !! | TTTGAACTTGTTATGCTCTT+TGG | + | chr7_3:52324384-52324403 | Msa1109020:intron | 30.0% |
| CTTGTATTAGTAAACTCTTG+TGG | + | chr7_3:52324429-52324448 | Msa1109020:intron | 30.0% | |
| CAGTTCTATCTCTATATGAT+GGG | - | chr7_3:52324507-52324526 | None:intergenic | 30.0% | |
| TTTATGCTCATTGTAACAAG+GGG | - | chr7_3:52324574-52324593 | None:intergenic | 30.0% | |
| CATTTATGCTCATTGTAACA+AGG | - | chr7_3:52324576-52324595 | None:intergenic | 30.0% | |
| TGTAATACTCATTGCAGAAA+TGG | + | chr7_3:52324621-52324640 | Msa1109020:intron | 30.0% | |
| TGCAGAAATGGTAAACTTAA+AGG | + | chr7_3:52324633-52324652 | Msa1109020:intron | 30.0% | |
| CTCTAATGAGGAATAAAAAG+AGG | - | chr7_3:52324752-52324771 | None:intergenic | 30.0% | |
| ! | TTCTAGAAATCACAACATCA+AGG | - | chr7_3:52324903-52324922 | None:intergenic | 30.0% |
| CCACTTAAACGTAATCTATT+AGG | - | chr7_3:52324957-52324976 | None:intergenic | 30.0% | |
| CCTAATAGATTACGTTTAAG+TGG | + | chr7_3:52324954-52324973 | Msa1109020:intron | 30.0% | |
| TAGTATTACTATGCTCTCTT+TGG | - | chr7_3:52325029-52325048 | None:intergenic | 30.0% | |
| AACAAATTAACAGGCGTTTA+TGG | - | chr7_3:52325107-52325126 | None:intergenic | 30.0% | |
| AGGAGTAAGAACAAATTAAC+AGG | - | chr7_3:52325116-52325135 | None:intergenic | 30.0% | |
| !! | AACAAATTAATAGGCGTTGA+TGG | - | chr7_3:52325144-52325163 | None:intergenic | 30.0% |
| ! | TGACTCAGAAAGTATAACTT+TGG | + | chr7_3:52325215-52325234 | Msa1109020:intron | 30.0% |
| TATTCAATGCTTCATCTTCA+TGG | + | chr7_3:52325551-52325570 | Msa1109020:intron | 30.0% | |
| ATAAACTATGCCCTTTGATA+AGG | + | chr7_3:52325625-52325644 | Msa1109020:intron | 30.0% | |
| ! | ATTTTTGCTCAAAAATCTGC+AGG | + | chr7_3:52325982-52326001 | Msa1109020:intron | 30.0% |
| ! | AAATTTGCATTCTGAAGAGA+TGG | - | chr7_3:52326101-52326120 | None:intergenic | 30.0% |
| ! | CTCTTCAGAATGCAAATTTT+TGG | + | chr7_3:52326102-52326121 | Msa1109020:intron | 30.0% |
| !! | AATGCAAATTTTTGGAAGCT+TGG | + | chr7_3:52326110-52326129 | Msa1109020:intron | 30.0% |
| ! | ACTCAAATTTTCTCCTTTAC+AGG | + | chr7_3:52326135-52326154 | Msa1109020:intron | 30.0% |
| CAGAATATATATACGACAGA+AGG | - | chr7_3:52326207-52326226 | None:intergenic | 30.0% | |
| ! | AAAAGAACTACCTTTAAAGG+AGG | - | chr7_3:52326232-52326251 | None:intergenic | 30.0% |
| GAAGAATATAGTACATACTC+CGG | - | chr7_3:52326569-52326588 | None:intergenic | 30.0% | |
| TATTCTTCATGACATGTTGT+TGG | + | chr7_3:52326581-52326600 | Msa1109020:intron | 30.0% | |
| ! | TAGCTATCCTAATTAGCTTA+TGG | + | chr7_3:52326765-52326784 | Msa1109020:intron | 30.0% |
| TAGAAGGTAAGTTTGACATA+GGG | - | chr7_3:52326907-52326926 | None:intergenic | 30.0% | |
| ! | TTTCTGTTTTACATTGCAGT+TGG | + | chr7_3:52326951-52326970 | Msa1109020:intron | 30.0% |
| ! | TTCTGTTTTACATTGCAGTT+GGG | + | chr7_3:52326952-52326971 | Msa1109020:intron | 30.0% |
| !! | AATGACTTCAAAAGTGTTGA+AGG | + | chr7_3:52326988-52327007 | Msa1109020:CDS | 30.0% |
| !! | ATGACTTCAAAAGTGTTGAA+GGG | + | chr7_3:52326989-52327008 | Msa1109020:CDS | 30.0% |
| AAAGTTCAGATTAGAGTTAC+TGG | - | chr7_3:52327061-52327080 | None:intergenic | 30.0% | |
| ! | TATGCTTTAACTGTTTTGCA+TGG | + | chr7_3:52327275-52327294 | Msa1109020:intron | 30.0% |
| TGGTATTACAACAAACAACA+AGG | + | chr7_3:52327295-52327314 | Msa1109020:intron | 30.0% | |
| TTTAATGACGTAAGAGCTAA+TGG | + | chr7_3:52327447-52327466 | Msa1109020:intron | 30.0% | |
| TAGAACTGTCTTGATCATTT+CGG | + | chr7_3:52327649-52327668 | Msa1109020:intron | 30.0% | |
| AGTAAAGCTAATGCGTAATA+CGG | - | chr7_3:52327719-52327738 | None:intergenic | 30.0% | |
| TTTACCTGAAAAAAGACTTG+TGG | - | chr7_3:52327755-52327774 | None:intergenic | 30.0% | |
| !! | TAGACTGCTTTTATGTATTG+TGG | + | chr7_3:52327839-52327858 | Msa1109020:intron | 30.0% |
| !! | ATTAGACGAAGAAGTTTTAG+AGG | - | chr7_3:52327964-52327983 | None:intergenic | 30.0% |
| TTCGTGAAATTCTTTCTAAC+TGG | - | chr7_3:52328153-52328172 | None:intergenic | 30.0% | |
| GAAAGAATTTCACGAATTAG+CGG | + | chr7_3:52328157-52328176 | Msa1109020:three_prime_UTR | 30.0% | |
| ATTAGATAACCTTGTATGCA+GGG | - | chr7_3:52328269-52328288 | None:intergenic | 30.0% | |
| AATTAGATAACCTTGTATGC+AGG | - | chr7_3:52328270-52328289 | None:intergenic | 30.0% | |
| TGTGTCTATAAACCATGAAA+GGG | - | chr7_3:52328465-52328484 | None:intergenic | 30.0% | |
| AGGTAGAATAATCTTTCCTT+TGG | - | chr7_3:52328515-52328534 | None:intergenic | 30.0% | |
| TGTTTGAGCAGTTAAATCTG+AGG | + | chr7_3:52322455-52322474 | Msa1109020:intron | 35.0% | |
| ! | TCAAGCTTTAATCAGCTTCT+TGG | + | chr7_3:52322507-52322526 | Msa1109020:CDS | 35.0% |
| CTTACGTTAATAAGCTTTCC+AGG | - | chr7_3:52322801-52322820 | None:intergenic | 35.0% | |
| TTGATATTCAGAATTCAGGC+AGG | + | chr7_3:52323331-52323350 | Msa1109020:intron | 35.0% | |
| !! | AGTTTGAAACCAAGTTTTGC+AGG | + | chr7_3:52323420-52323439 | Msa1109020:intron | 35.0% |
| GAGTAAACTTACTTTCGCAA+TGG | + | chr7_3:52323604-52323623 | Msa1109020:intron | 35.0% | |
| CTTACGTCTCAAAATGACAA+TGG | + | chr7_3:52323638-52323657 | Msa1109020:intron | 35.0% | |
| GTAGTCAAGTGCTATAACAT+AGG | - | chr7_3:52323732-52323751 | None:intergenic | 35.0% | |
| AAATCCATACACAATGCAAG+GGG | + | chr7_3:52323777-52323796 | Msa1109020:intron | 35.0% | |
| CTCATCATTACAACTTTGCA+AGG | + | chr7_3:52323871-52323890 | Msa1109020:intron | 35.0% | |
| !! | CATTTACCTTGTTGACTTGT+TGG | - | chr7_3:52323899-52323918 | None:intergenic | 35.0% |
| GTAAATGAACCTTACTCTGA+TGG | + | chr7_3:52323912-52323931 | Msa1109020:intron | 35.0% | |
| ! | CCAATACTGTGTTTCTTTTC+TGG | - | chr7_3:52323962-52323981 | None:intergenic | 35.0% |
| CCAGAAAAGAAACACAGTAT+TGG | + | chr7_3:52323959-52323978 | Msa1109020:intron | 35.0% | |
| CGACCAGATATGAACATAAA+AGG | + | chr7_3:52324012-52324031 | Msa1109020:intron | 35.0% | |
| ATAATCTTATGCCAGGGATT+GGG | - | chr7_3:52324055-52324074 | None:intergenic | 35.0% | |
| ! | TCTAAAACCCATACTCAAGT+TGG | + | chr7_3:52324086-52324105 | Msa1109020:intron | 35.0% |
| !!! | GCCTACCCTAGATTTTTTAT+TGG | - | chr7_3:52324199-52324218 | None:intergenic | 35.0% |
| !! | AGGTTTCAGTTTGTTGAACT+AGG | - | chr7_3:52324253-52324272 | None:intergenic | 35.0% |
| TCAAAATTACCGAAGTATGG+AGG | - | chr7_3:52324333-52324352 | None:intergenic | 35.0% | |
| TACAAGACTTTGAGTATACC+AGG | - | chr7_3:52324415-52324434 | None:intergenic | 35.0% | |
| CCAGTTCTATCTCTATATGA+TGG | - | chr7_3:52324508-52324527 | None:intergenic | 35.0% | |
| CCATCATATAGAGATAGAAC+TGG | + | chr7_3:52324505-52324524 | Msa1109020:intron | 35.0% | |
| AATGAGGAATAAAAAGAGGG+AGG | - | chr7_3:52324748-52324767 | None:intergenic | 35.0% | |
| GCCTATCAGTTTGTGAAATT+CGG | + | chr7_3:52324840-52324859 | Msa1109020:intron | 35.0% | |
| CCTATCAGTTTGTGAAATTC+GGG | + | chr7_3:52324841-52324860 | Msa1109020:intron | 35.0% | |
| ACGTTTAAGTGGATGATCTT+TGG | + | chr7_3:52324965-52324984 | Msa1109020:intron | 35.0% | |
| CATAGTAATACTAATCTGCC+TGG | + | chr7_3:52325036-52325055 | Msa1109020:intron | 35.0% | |
| TATACACTATACAGTGTACC+AGG | - | chr7_3:52325057-52325076 | None:intergenic | 35.0% | |
| AACTTACAAAGCCTGTAACT+TGG | + | chr7_3:52325378-52325397 | Msa1109020:CDS | 35.0% | |
| ACATTAAAATGCGACATGCA+TGG | + | chr7_3:52325462-52325481 | Msa1109020:intron | 35.0% | |
| CAATTGTCATAGCAAATCAC+AGG | - | chr7_3:52325504-52325523 | None:intergenic | 35.0% | |
| AAATTTCCATTGGAACGTTG+AGG | + | chr7_3:52325648-52325667 | Msa1109020:CDS | 35.0% | |
| !! | ATTTTGTGCATGATGATGTC+TGG | + | chr7_3:52325685-52325704 | Msa1109020:CDS | 35.0% |
| !!! | TTTTACCGACTCCTATTGAA+TGG | + | chr7_3:52325761-52325780 | Msa1109020:intron | 35.0% |
| !! | TTTACCGACTCCTATTGAAT+GGG | + | chr7_3:52325762-52325781 | Msa1109020:intron | 35.0% |
| TATTCCCATTCAATAGGAGT+CGG | - | chr7_3:52325769-52325788 | None:intergenic | 35.0% | |
| CGTTTATTGCGTCAATTTCT+CGG | - | chr7_3:52325858-52325877 | None:intergenic | 35.0% | |
| TGCAGGTAATCACTCAAATA+TGG | + | chr7_3:52325999-52326018 | Msa1109020:intron | 35.0% | |
| GCAGGTAATCACTCAAATAT+GGG | + | chr7_3:52326000-52326019 | Msa1109020:intron | 35.0% | |
| CACCCATATATCCAATATAC+CGG | - | chr7_3:52326053-52326072 | None:intergenic | 35.0% | |
| GGTATATTGGATATATGGGT+GGG | + | chr7_3:52326052-52326071 | Msa1109020:CDS | 35.0% | |
| GGTACTCACTAAACAATTAC+AGG | + | chr7_3:52326073-52326092 | Msa1109020:intron | 35.0% | |
| ! | AAATTTTCTCCTTTACAGGC+AGG | + | chr7_3:52326139-52326158 | Msa1109020:intron | 35.0% |
| ! | AATTTTCTCCTTTACAGGCA+GGG | + | chr7_3:52326140-52326159 | Msa1109020:intron | 35.0% |
| ATATTCTGCACCTCCTTTAA+AGG | + | chr7_3:52326219-52326238 | Msa1109020:CDS | 35.0% | |
| ! | TCTGTATCTTTTGCCTTTGA+TGG | + | chr7_3:52326273-52326292 | Msa1109020:intron | 35.0% |
| !! | ACTAATGTAACTTGCTCCAA+GGG | - | chr7_3:52326360-52326379 | None:intergenic | 35.0% |
| !! | AACTAATGTAACTTGCTCCA+AGG | - | chr7_3:52326361-52326380 | None:intergenic | 35.0% |
| !! | CAAGTTACATTAGTTTGCCA+TGG | + | chr7_3:52326366-52326385 | Msa1109020:CDS | 35.0% |
| CAACGAGTTATCAAAAGAGA+AGG | - | chr7_3:52326399-52326418 | None:intergenic | 35.0% | |
| AGTGTGAGAACAATAATGTC+TGG | - | chr7_3:52326532-52326551 | None:intergenic | 35.0% | |
| AAGAACTTGTGAGACTGTTT+GGG | - | chr7_3:52326845-52326864 | None:intergenic | 35.0% | |
| TAAGAACTTGTGAGACTGTT+TGG | - | chr7_3:52326846-52326865 | None:intergenic | 35.0% | |
| GTAGAAGGTAAGTTTGACAT+AGG | - | chr7_3:52326908-52326927 | None:intergenic | 35.0% | |
| CAATGTTATTGATCGGTAGA+AGG | - | chr7_3:52326923-52326942 | None:intergenic | 35.0% | |
| !! | TGACTTCAAAAGTGTTGAAG+GGG | + | chr7_3:52326990-52327009 | Msa1109020:CDS | 35.0% |
| !! | TTGGTTCTGAAACTGCAAAA+TGG | + | chr7_3:52327153-52327172 | Msa1109020:CDS | 35.0% |
| ACTGCAAAATGGATATGTGT+TGG | + | chr7_3:52327164-52327183 | Msa1109020:CDS | 35.0% | |
| ATTACACAATTATCTGTCGC+TGG | + | chr7_3:52327197-52327216 | Msa1109020:CDS | 35.0% | |
| ATTACAACAAACAACAAGGC+TGG | + | chr7_3:52327299-52327318 | Msa1109020:intron | 35.0% | |
| !! | CTTTTTAGGAGAAGTTGCAA+AGG | + | chr7_3:52327398-52327417 | Msa1109020:intron | 35.0% |
| ATGGTTACAGGATATCTACT+TGG | + | chr7_3:52327683-52327702 | Msa1109020:intron | 35.0% | |
| TGGTTACAGGATATCTACTT+GGG | + | chr7_3:52327684-52327703 | Msa1109020:intron | 35.0% | |
| AAAGACTTGTGGAGCTATTA+AGG | - | chr7_3:52327744-52327763 | None:intergenic | 35.0% | |
| CAAGGCAAAAGATGAAAAGA+AGG | - | chr7_3:52327876-52327895 | None:intergenic | 35.0% | |
| GAGAAAATACTTGAACTGCA+AGG | - | chr7_3:52327894-52327913 | None:intergenic | 35.0% | |
| ! | GCAGTTCAAGTATTTTCTCA+AGG | + | chr7_3:52327895-52327914 | Msa1109020:intron | 35.0% |
| AACAGACCAAGAACCAAAAA+TGG | - | chr7_3:52328079-52328098 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGTTCTTGGTCTGT+TGG | + | chr7_3:52328078-52328097 | Msa1109020:CDS | 35.0% |
| ! | ATGGCACACATCTTTAACTT+AGG | - | chr7_3:52328230-52328249 | None:intergenic | 35.0% |
| GGGTGACAAACAATAAACTA+TGG | - | chr7_3:52328249-52328268 | None:intergenic | 35.0% | |
| ATAATCTTGAGTCCCTTTCA+TGG | + | chr7_3:52328450-52328469 | Msa1109020:three_prime_UTR | 35.0% | |
| GTGTGTCTATAAACCATGAA+AGG | - | chr7_3:52328466-52328485 | None:intergenic | 35.0% | |
| ACCTCTTCAGTTGTCTTCAA+TGG | + | chr7_3:52321958-52321977 | Msa1109020:exon | 40.0% | |
| AACCATTCATGCATCTGTGT+TGG | + | chr7_3:52322202-52322221 | Msa1109020:intron | 40.0% | |
| AACCAACACAGATGCATGAA+TGG | - | chr7_3:52322207-52322226 | None:intergenic | 40.0% | |
| !! | AAGCTTGATCCATTTTTCGC+TGG | - | chr7_3:52322495-52322514 | None:intergenic | 40.0% |
| ! | ACTTCAATTTTCGTTGCGGA+TGG | + | chr7_3:52322617-52322636 | Msa1109020:intron | 40.0% |
| ACAACACAACCCCACAAAAT+TGG | + | chr7_3:52322882-52322901 | Msa1109020:intron | 40.0% | |
| ! | ACCTCAGAAGCCAATTTTGT+GGG | - | chr7_3:52322895-52322914 | None:intergenic | 40.0% |
| TGCTGTTAAGAGTCTCACAT+TGG | - | chr7_3:52322963-52322982 | None:intergenic | 40.0% | |
| GTTTCCTCACACAAAAGTGA+AGG | + | chr7_3:52323109-52323128 | Msa1109020:intron | 40.0% | |
| ! | CAAAATCTTGAGGCATCAGA+GGG | - | chr7_3:52323245-52323264 | None:intergenic | 40.0% |
| ! | ACAAAATCTTGAGGCATCAG+AGG | - | chr7_3:52323246-52323265 | None:intergenic | 40.0% |
| TTGAGAATTTGCACCATGCA+TGG | - | chr7_3:52323538-52323557 | None:intergenic | 40.0% | |
| ATAACCCCTTGCATTGTGTA+TGG | - | chr7_3:52323784-52323803 | None:intergenic | 40.0% | |
| TCGTTTATGCTGAGAGCTAT+GGG | - | chr7_3:52323825-52323844 | None:intergenic | 40.0% | |
| TTCGTTTATGCTGAGAGCTA+TGG | - | chr7_3:52323826-52323845 | None:intergenic | 40.0% | |
| ! | GGCAAAATAGTTTGCACTGA+TGG | + | chr7_3:52323980-52323999 | Msa1109020:intron | 40.0% |
| CATAATCTTATGCCAGGGAT+TGG | - | chr7_3:52324056-52324075 | None:intergenic | 40.0% | |
| TTTGATGCTTAGGATGGATG+TGG | + | chr7_3:52324219-52324238 | Msa1109020:intron | 40.0% | |
| TTGGATTCAGCAATAGAGCT+AGG | - | chr7_3:52324277-52324296 | None:intergenic | 40.0% | |
| !! | TTATGCTCTTTGGTTTGACC+TGG | + | chr7_3:52324394-52324413 | Msa1109020:intron | 40.0% |
| GTGATCAGCTTAGCATTGTT+TGG | - | chr7_3:52324470-52324489 | None:intergenic | 40.0% | |
| GGTGGAAAGAATCTCTAATG+AGG | - | chr7_3:52324764-52324783 | None:intergenic | 40.0% | |
| TTCCACTGTCCTTGCTTATT+GGG | + | chr7_3:52324818-52324837 | Msa1109020:intron | 40.0% | |
| CCCGAATTTCACAAACTGAT+AGG | - | chr7_3:52324844-52324863 | None:intergenic | 40.0% | |
| TCACAACATCAAGGACATGT+AGG | - | chr7_3:52324894-52324913 | None:intergenic | 40.0% | |
| GTGTATATCCTGTCAGGAAT+GGG | - | chr7_3:52325711-52325730 | None:intergenic | 40.0% | |
| TGTGTATATCCTGTCAGGAA+TGG | - | chr7_3:52325712-52325731 | None:intergenic | 40.0% | |
| ATTCCTGACAGGATATACAC+AGG | + | chr7_3:52325711-52325730 | Msa1109020:CDS | 40.0% | |
| TTACCTGTGTATATCCTGTC+AGG | - | chr7_3:52325717-52325736 | None:intergenic | 40.0% | |
| CCAATCATTCAGGGTCTAAA+AGG | - | chr7_3:52325830-52325849 | None:intergenic | 40.0% | |
| ! | CCTTTTAGACCCTGAATGAT+TGG | + | chr7_3:52325827-52325846 | Msa1109020:intron | 40.0% |
| TCGGTCATACCAATCATTCA+GGG | - | chr7_3:52325839-52325858 | None:intergenic | 40.0% | |
| ! | CCAGAAGGAATTGGTCTATA+AGG | - | chr7_3:52325883-52325902 | None:intergenic | 40.0% |
| CCTTATAGACCAATTCCTTC+TGG | + | chr7_3:52325880-52325899 | Msa1109020:CDS | 40.0% | |
| !! | CAAATATGGGTGCTACTACT+AGG | + | chr7_3:52326013-52326032 | Msa1109020:CDS | 40.0% |
| GGCCGGTATATTGGATATAT+GGG | + | chr7_3:52326048-52326067 | Msa1109020:CDS | 40.0% | |
| CGGTATATTGGATATATGGG+TGG | + | chr7_3:52326051-52326070 | Msa1109020:CDS | 40.0% | |
| !!! | CTTTTTTACCTTGCATTGGG+TGG | + | chr7_3:52326178-52326197 | Msa1109020:CDS | 40.0% |
| CGTAGTCAAATGACCATCAA+AGG | - | chr7_3:52326289-52326308 | None:intergenic | 40.0% | |
| !! | TACATTAGTTTGCCATGGTG+TGG | + | chr7_3:52326371-52326390 | Msa1109020:intron | 40.0% |
| ! | TCATTTTCAATTAGGTGGGC+TGG | + | chr7_3:52326481-52326500 | Msa1109020:intron | 40.0% |
| AGTTTGACATAGGGTCTGTT+TGG | - | chr7_3:52326898-52326917 | None:intergenic | 40.0% | |
| !!! | TAGTCTCTACCTGTTGCTTT+TGG | + | chr7_3:52327134-52327153 | Msa1109020:intron | 40.0% |
| GTTTCAGAACCAAAAGCAAC+AGG | - | chr7_3:52327146-52327165 | None:intergenic | 40.0% | |
| GGTTACAGGATATCTACTTG+GGG | + | chr7_3:52327685-52327704 | Msa1109020:intron | 40.0% | |
| !!! | AGCTCCACAAGTCTTTTTTC+AGG | + | chr7_3:52327748-52327767 | Msa1109020:CDS | 40.0% |
| ! | GCTTCACATCTTTTTGTCAG+TGG | - | chr7_3:52328123-52328142 | None:intergenic | 40.0% |
| ATCATGGCATGCATATTCAG+TGG | - | chr7_3:52328199-52328218 | None:intergenic | 40.0% | |
| !! | GACACACTTACTTAGTCTTG+AGG | + | chr7_3:52328479-52328498 | Msa1109020:three_prime_UTR | 40.0% |
| TTGAGGTCTTTGTATGCCAA+AGG | + | chr7_3:52328496-52328515 | Msa1109020:three_prime_UTR | 40.0% | |
| GCCATTGAAGACAACTGAAG+AGG | - | chr7_3:52321962-52321981 | None:intergenic | 45.0% | |
| GCTGAAACTGATGCAACTGA+AGG | + | chr7_3:52322336-52322355 | Msa1109020:CDS | 45.0% | |
| ! | AGCAGTTAAATCTGAGGCAC+CGG | + | chr7_3:52322461-52322480 | Msa1109020:intron | 45.0% |
| !! | TAAATCTGAGGCACCGGATA+AGG | + | chr7_3:52322467-52322486 | Msa1109020:CDS | 45.0% |
| ! | CCTCAGAAGCCAATTTTGTG+GGG | - | chr7_3:52322894-52322913 | None:intergenic | 45.0% |
| ! | CACCTCAGAAGCCAATTTTG+TGG | - | chr7_3:52322896-52322915 | None:intergenic | 45.0% |
| !! | CAAAATTGGCTTCTGAGGTG+AGG | + | chr7_3:52322896-52322915 | Msa1109020:intron | 45.0% |
| TTGACCAGACACGTATCACA+AGG | + | chr7_3:52322992-52323011 | Msa1109020:intron | 45.0% | |
| TTGACCTTGTGATACGTGTC+TGG | - | chr7_3:52322999-52323018 | None:intergenic | 45.0% | |
| !! | GACTCCTTCACTTTTGTGTG+AGG | - | chr7_3:52323116-52323135 | None:intergenic | 45.0% |
| GGGAAATTATATAGGACCGG+AGG | - | chr7_3:52323192-52323211 | None:intergenic | 45.0% | |
| TCAGAGGGTAACCTTTGGAT+AGG | - | chr7_3:52323230-52323249 | None:intergenic | 45.0% | |
| AGGCAGGGTACAAAATCTTG+AGG | - | chr7_3:52323255-52323274 | None:intergenic | 45.0% | |
| GGTGAAATCAGAGACTTGTG+GGG | - | chr7_3:52323378-52323397 | None:intergenic | 45.0% | |
| GGGTGAAATCAGAGACTTGT+GGG | - | chr7_3:52323379-52323398 | None:intergenic | 45.0% | |
| TGGGTGAAATCAGAGACTTG+TGG | - | chr7_3:52323380-52323399 | None:intergenic | 45.0% | |
| ! | TGATTTCACCCAGTGTCGAA+GGG | + | chr7_3:52323388-52323407 | Msa1109020:intron | 45.0% |
| GGGTGTAAACCTGCAAAACT+TGG | - | chr7_3:52323432-52323451 | None:intergenic | 45.0% | |
| TTACACCCCCAAAATACCTG+TGG | + | chr7_3:52323444-52323463 | Msa1109020:intron | 45.0% | |
| CATGGTGTATGAAAGTGGCT+CGG | - | chr7_3:52323520-52323539 | None:intergenic | 45.0% | |
| CCATGCATGGTGTATGAAAG+TGG | - | chr7_3:52323525-52323544 | None:intergenic | 45.0% | |
| CCACTTTCATACACCATGCA+TGG | + | chr7_3:52323522-52323541 | Msa1109020:intron | 45.0% | |
| AAGGACCCAACAAGTCAACA+AGG | + | chr7_3:52323890-52323909 | Msa1109020:intron | 45.0% | |
| ! | TAGTTTGCACTGATGGACAG+TGG | + | chr7_3:52323987-52324006 | Msa1109020:intron | 45.0% |
| ! | AGTTTGCACTGATGGACAGT+GGG | + | chr7_3:52323988-52324007 | Msa1109020:intron | 45.0% |
| ! | CACTCTAGAAGTCCAATCCT+GGG | - | chr7_3:52324161-52324180 | None:intergenic | 45.0% |
| ! | ACACTCTAGAAGTCCAATCC+TGG | - | chr7_3:52324162-52324181 | None:intergenic | 45.0% |
| !! | AGGATTGGACTTCTAGAGTG+TGG | + | chr7_3:52324161-52324180 | Msa1109020:intron | 45.0% |
| ! | TAGGGTAGGCTTTGATGCTT+AGG | + | chr7_3:52324209-52324228 | Msa1109020:intron | 45.0% |
| ! | GTAGGCTTTGATGCTTAGGA+TGG | + | chr7_3:52324213-52324232 | Msa1109020:intron | 45.0% |
| ATTCAGCAATAGAGCTAGGC+AGG | - | chr7_3:52324273-52324292 | None:intergenic | 45.0% | |
| GCTGAATCCAACTCCAATGA+CGG | + | chr7_3:52324286-52324305 | Msa1109020:intron | 45.0% | |
| TCCCACAATCCTCCATACTT+CGG | + | chr7_3:52324321-52324340 | Msa1109020:intron | 45.0% | |
| ACCGAAGTATGGAGGATTGT+GGG | - | chr7_3:52324325-52324344 | None:intergenic | 45.0% | |
| TACCGAAGTATGGAGGATTG+TGG | - | chr7_3:52324326-52324345 | None:intergenic | 45.0% | |
| ACTCTTGTGGTCAAGAACCA+AGG | + | chr7_3:52324442-52324461 | Msa1109020:intron | 45.0% | |
| CTCTTGTGGTCAAGAACCAA+GGG | + | chr7_3:52324443-52324462 | Msa1109020:intron | 45.0% | |
| CTTAGCATTGTTTGGACCCT+TGG | - | chr7_3:52324462-52324481 | None:intergenic | 45.0% | |
| AGCTGATCACACTACGTGAT+AGG | + | chr7_3:52324480-52324499 | Msa1109020:intron | 45.0% | |
| CTTCCACTGTCCTTGCTTAT+TGG | + | chr7_3:52324817-52324836 | Msa1109020:intron | 45.0% | |
| ACTGATAGGCCCAATAAGCA+AGG | - | chr7_3:52324830-52324849 | None:intergenic | 45.0% | |
| CAGTTTGTGAAATTCGGGTC+CGG | + | chr7_3:52324846-52324865 | Msa1109020:intron | 45.0% | |
| ! | AACAGGCGTTTATGGATTGC+AGG | - | chr7_3:52325099-52325118 | None:intergenic | 45.0% |
| !! | AATAGGCGTTGATGGATTGC+AGG | - | chr7_3:52325136-52325155 | None:intergenic | 45.0% |
| ACTAATGGAGGCCAAGTTAC+AGG | - | chr7_3:52325392-52325411 | None:intergenic | 45.0% | |
| TAACTTGGCCTCCATTAGTG+TGG | + | chr7_3:52325393-52325412 | Msa1109020:CDS | 45.0% | |
| AACTTGGCCTCCATTAGTGT+GGG | + | chr7_3:52325394-52325413 | Msa1109020:CDS | 45.0% | |
| CAAACTACACCCCACACTAA+TGG | - | chr7_3:52325407-52325426 | None:intergenic | 45.0% | |
| TTAGTGTGGGGTGTAGTTTG+TGG | + | chr7_3:52325407-52325426 | Msa1109020:CDS | 45.0% | |
| CAACATCCTCAACGTTCCAA+TGG | - | chr7_3:52325657-52325676 | None:intergenic | 45.0% | |
| CTCGGTCATACCAATCATTC+AGG | - | chr7_3:52325840-52325859 | None:intergenic | 45.0% | |
| !! | ATATGGGTGCTACTACTAGG+AGG | + | chr7_3:52326016-52326035 | Msa1109020:CDS | 45.0% |
| ACTACTAGGAGGTCTTACCA+CGG | + | chr7_3:52326027-52326046 | Msa1109020:CDS | 45.0% | |
| TATATCCAATATACCGGCCG+TGG | - | chr7_3:52326047-52326066 | None:intergenic | 45.0% | |
| CGGCCGGTATATTGGATATA+TGG | + | chr7_3:52326047-52326066 | Msa1109020:CDS | 45.0% | |
| AAATCATGCCCTGCCTGTAA+AGG | - | chr7_3:52326151-52326170 | None:intergenic | 45.0% | |
| ! | TGGATTGGAAACTTTGCCCT+TGG | + | chr7_3:52326341-52326360 | Msa1109020:CDS | 45.0% |
| !! | AAAGAGAAGGTACCACACCA+TGG | - | chr7_3:52326386-52326405 | None:intergenic | 45.0% |
| ACACTCCTATACAGCATAGC+CGG | + | chr7_3:52326547-52326566 | Msa1109020:CDS | 45.0% | |
| ATACTCCGGCTATGCTGTAT+AGG | - | chr7_3:52326555-52326574 | None:intergenic | 45.0% | |
| TTGAAGGGGATAGAGCTCTA+GGG | + | chr7_3:52327004-52327023 | Msa1109020:CDS | 45.0% | |
| !!! | GCGCAACCATTTTTGGTTCT+TGG | + | chr7_3:52328070-52328089 | Msa1109020:CDS | 45.0% |
| TGTTTGTCACCCTGCATACA+AGG | + | chr7_3:52328257-52328276 | Msa1109020:three_prime_UTR | 45.0% | |
| CAATCTTCTCTTGCCCACTT+AGG | + | chr7_3:52328301-52328320 | Msa1109020:three_prime_UTR | 45.0% | |
| CGTGTCTTCAGTTCAGTGTG+TGG | + | chr7_3:52321927-52321946 | Msa1109020:five_prime_UTR | 50.0% | |
| ! | TTTTTCGCTGGCGCCTTATC+CGG | - | chr7_3:52322483-52322502 | None:intergenic | 50.0% |
| ! | GATAAGGCGCCAGCGAAAAA+TGG | + | chr7_3:52322483-52322502 | Msa1109020:CDS | 50.0% |
| ! | CCCCACAAAATTGGCTTCTG+AGG | + | chr7_3:52322891-52322910 | Msa1109020:intron | 50.0% |
| GGTGTACTCAGGTGCAGATT+CGG | - | chr7_3:52323171-52323190 | None:intergenic | 50.0% | |
| AGGCATCAGAGGGTAACCTT+TGG | - | chr7_3:52323235-52323254 | None:intergenic | 50.0% | |
| !! | CAAATCAAATGAGGGGCGCT+TGG | - | chr7_3:52323278-52323297 | None:intergenic | 50.0% |
| ! | CTGATTTCACCCAGTGTCGA+AGG | + | chr7_3:52323387-52323406 | Msa1109020:intron | 50.0% |
| ! | GATTTCACCCAGTGTCGAAG+GGG | + | chr7_3:52323389-52323408 | Msa1109020:intron | 50.0% |
| AAAGGTTCCCCTTCGACACT+GGG | - | chr7_3:52323399-52323418 | None:intergenic | 50.0% | |
| AAAAGGTTCCCCTTCGACAC+TGG | - | chr7_3:52323400-52323419 | None:intergenic | 50.0% | |
| !! | GCTCACCACAGGTATTTTGG+GGG | - | chr7_3:52323452-52323471 | None:intergenic | 50.0% |
| ! | CGCTCACCACAGGTATTTTG+GGG | - | chr7_3:52323453-52323472 | None:intergenic | 50.0% |
| ! | CCGCTCACCACAGGTATTTT+GGG | - | chr7_3:52323454-52323473 | None:intergenic | 50.0% |
| CCCAAAATACCTGTGGTGAG+CGG | + | chr7_3:52323451-52323470 | Msa1109020:intron | 50.0% | |
| ! | ACCGCTCACCACAGGTATTT+TGG | - | chr7_3:52323455-52323474 | None:intergenic | 50.0% |
| CGAGTCAACCCATCAGAGTA+AGG | - | chr7_3:52323924-52323943 | None:intergenic | 50.0% | |
| TCGGTTACCGTCATTGGAGT+TGG | - | chr7_3:52324296-52324315 | None:intergenic | 50.0% | |
| ACTAGCTCGGTTACCGTCAT+TGG | - | chr7_3:52324302-52324321 | None:intergenic | 50.0% | |
| GAACAACAGAAAGTGGCAGG+TGG | - | chr7_3:52324782-52324801 | None:intergenic | 50.0% | |
| GAGGAACAACAGAAAGTGGC+AGG | - | chr7_3:52324785-52324804 | None:intergenic | 50.0% | |
| GAGGGAGGAACAACAGAAAG+TGG | - | chr7_3:52324789-52324808 | None:intergenic | 50.0% | |
| ACAGTGGAAGCAGGAGAAGA+GGG | - | chr7_3:52324807-52324826 | None:intergenic | 50.0% | |
| TAAGCAAGGACAGTGGAAGC+AGG | - | chr7_3:52324816-52324835 | None:intergenic | 50.0% | |
| ACTTGGCCTCCATTAGTGTG+GGG | + | chr7_3:52325395-52325414 | Msa1109020:CDS | 50.0% | |
| ACTACACCCCACACTAATGG+AGG | - | chr7_3:52325404-52325423 | None:intergenic | 50.0% | |
| TCTTACCACGGCCGGTATAT+TGG | + | chr7_3:52326039-52326058 | Msa1109020:CDS | 50.0% | |
| !! | TTCAATTAGGTGGGCTGGTC+AGG | + | chr7_3:52326486-52326505 | Msa1109020:intron | 50.0% |
| GTTGAAGGGGATAGAGCTCT+AGG | + | chr7_3:52327003-52327022 | Msa1109020:CDS | 50.0% | |
| ACAGGATATCTACTTGGGGC+TGG | + | chr7_3:52327689-52327708 | Msa1109020:intron | 50.0% | |
| AAAATGGTTGCGCACTAGCC+TGG | - | chr7_3:52328063-52328082 | None:intergenic | 50.0% | |
| ! | GGCTAGTGCGCAACCATTTT+TGG | + | chr7_3:52328063-52328082 | Msa1109020:intron | 50.0% |
| ! | CACGAATTAGCGGCTTTTGC+TGG | + | chr7_3:52328167-52328186 | Msa1109020:three_prime_UTR | 50.0% |
| ! | TGCAGATTCGGCTGGTTCAG+TGG | - | chr7_3:52323159-52323178 | None:intergenic | 55.0% |
| TACTCAGGTGCAGATTCGGC+TGG | - | chr7_3:52323167-52323186 | None:intergenic | 55.0% | |
| TCTGCACCTGAGTACACCTC+CGG | + | chr7_3:52323173-52323192 | Msa1109020:intron | 55.0% | |
| ! | ATAGGACCGGAGGTGTACTC+AGG | - | chr7_3:52323182-52323201 | None:intergenic | 55.0% |
| !! | ATCAAATGAGGGGCGCTTGG+AGG | - | chr7_3:52323275-52323294 | None:intergenic | 55.0% |
| CTACTAAGACCGCTCACCAC+AGG | - | chr7_3:52323463-52323482 | None:intergenic | 55.0% | |
| CTGTGGTGAGCGGTCTTAGT+AGG | + | chr7_3:52323461-52323480 | Msa1109020:intron | 55.0% | |
| !! | GATGGGTTGACTCGACTGTG+CGG | + | chr7_3:52323930-52323949 | Msa1109020:intron | 55.0% |
| !! | ATGGGTTGACTCGACTGTGC+GGG | + | chr7_3:52323931-52323950 | Msa1109020:intron | 55.0% |
| CGCTATTGATGCCCAATCCC+TGG | + | chr7_3:52324041-52324060 | Msa1109020:intron | 55.0% | |
| GTCCAATCCTGGGCATGAGA+GGG | - | chr7_3:52324151-52324170 | None:intergenic | 55.0% | |
| AGTCCAATCCTGGGCATGAG+AGG | - | chr7_3:52324152-52324171 | None:intergenic | 55.0% | |
| !! | GGAGGATTGTGGGACTAGCT+CGG | - | chr7_3:52324315-52324334 | None:intergenic | 55.0% |
| GACAGTGGAAGCAGGAGAAG+AGG | - | chr7_3:52324808-52324827 | None:intergenic | 55.0% | |
| GGCCCAATAAGCAAGGACAG+TGG | - | chr7_3:52324823-52324842 | None:intergenic | 55.0% | |
| !! | GTTTGTGGTGCTGCTGCTTC+AGG | + | chr7_3:52325422-52325441 | Msa1109020:CDS | 55.0% |
| ATGTCTGGCCCATTCCTGAC+AGG | + | chr7_3:52325700-52325719 | Msa1109020:CDS | 55.0% | |
| GAAGGGATCCACCCAATGCA+AGG | - | chr7_3:52326189-52326208 | None:intergenic | 55.0% | |
| !! | TGGGCTGGTCAGGCTTTGTT+TGG | + | chr7_3:52326496-52326515 | Msa1109020:CDS | 55.0% |
| !! | GGGCTGGTCAGGCTTTGTTT+GGG | + | chr7_3:52326497-52326516 | Msa1109020:CDS | 55.0% |
| !! | GGATAGAGCTCTAGGGCTTC+AGG | + | chr7_3:52327011-52327030 | Msa1109020:CDS | 55.0% |
| CAACACACCCTCTCATGCCC+AGG | + | chr7_3:52324141-52324160 | Msa1109020:intron | 60.0% | |
| CACCCTCTCATGCCCAGGAT+TGG | + | chr7_3:52324146-52324165 | Msa1109020:intron | 60.0% | |
| GAGAGCAGCTGAGAGTGGGA+GGG | - | chr7_3:52324726-52324745 | None:intergenic | 60.0% | |
| GGAGGAGAGCAGCTGAGAGT+GGG | - | chr7_3:52324730-52324749 | None:intergenic | 60.0% | |
| GTGGAAGCAGGAGAAGAGGG+AGG | - | chr7_3:52324804-52324823 | None:intergenic | 60.0% | |
| CTAGGAGGTCTTACCACGGC+CGG | + | chr7_3:52326031-52326050 | Msa1109020:CDS | 60.0% | |
| !! | ATGAGGGGCGCTTGGAGGCA+GGG | - | chr7_3:52323270-52323289 | None:intergenic | 65.0% |
| !! | AATGAGGGGCGCTTGGAGGC+AGG | - | chr7_3:52323271-52323290 | None:intergenic | 65.0% |
| GGGGGGGGGGGGTTTGTAAT+AGG | - | chr7_3:52324676-52324695 | None:intergenic | 65.0% | |
| AGCTGAGAGTGGGAGGGAGG+GGG | - | chr7_3:52324720-52324739 | None:intergenic | 65.0% | |
| CAGCTGAGAGTGGGAGGGAG+GGG | - | chr7_3:52324721-52324740 | None:intergenic | 65.0% | |
| GCAGCTGAGAGTGGGAGGGA+GGG | - | chr7_3:52324722-52324741 | None:intergenic | 65.0% | |
| AGCAGCTGAGAGTGGGAGGG+AGG | - | chr7_3:52324723-52324742 | None:intergenic | 65.0% | |
| GGAGAGCAGCTGAGAGTGGG+AGG | - | chr7_3:52324727-52324746 | None:intergenic | 65.0% | |
| GGGAGGAGAGCAGCTGAGAG+TGG | - | chr7_3:52324731-52324750 | None:intergenic | 65.0% | |
| TGAGAGTGGGAGGGAGGGGG+GGG | - | chr7_3:52324717-52324736 | None:intergenic | 70.0% | |
| CTGAGAGTGGGAGGGAGGGG+GGG | - | chr7_3:52324718-52324737 | None:intergenic | 70.0% | |
| GCTGAGAGTGGGAGGGAGGG+GGG | - | chr7_3:52324719-52324738 | None:intergenic | 70.0% | |
| AGAGTGGGAGGGAGGGGGGG+GGG | - | chr7_3:52324715-52324734 | None:intergenic | 75.0% | |
| GAGAGTGGGAGGGAGGGGGG+GGG | - | chr7_3:52324716-52324735 | None:intergenic | 75.0% | |
| ! | AGTGGGAGGGAGGGGGGGGG+GGG | - | chr7_3:52324713-52324732 | None:intergenic | 80.0% |
| ! | GAGTGGGAGGGAGGGGGGGG+GGG | - | chr7_3:52324714-52324733 | None:intergenic | 80.0% |
| ! | TGGGAGGGAGGGGGGGGGGG+GGG | - | chr7_3:52324711-52324730 | None:intergenic | 85.0% |
| ! | GTGGGAGGGAGGGGGGGGGG+GGG | - | chr7_3:52324712-52324731 | None:intergenic | 85.0% |
| ! | AGGGAGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324707-52324726 | None:intergenic | 90.0% |
| ! | GAGGGAGGGGGGGGGGGGGG+GGG | - | chr7_3:52324708-52324727 | None:intergenic | 90.0% |
| ! | GGAGGGAGGGGGGGGGGGGG+GGG | - | chr7_3:52324709-52324728 | None:intergenic | 90.0% |
| ! | GGGAGGGAGGGGGGGGGGGG+GGG | - | chr7_3:52324710-52324729 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324703-52324722 | None:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324704-52324723 | None:intergenic | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324705-52324724 | None:intergenic | 95.0% |
| ! | GGGAGGGGGGGGGGGGGGGG+GGG | - | chr7_3:52324706-52324725 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52321904 | 52328591 | 52321904 | ID=Msa1109020;Name=Msa1109020 |
| chr7_3 | mRNA | 52321904 | 52328591 | 52321904 | ID=Msa1109020-mRNA-1;Parent=Msa1109020;Name=Msa1109020-mRNA-1;_AED=0.17;_eAED=0.17;_QI=73|0.87|0.82|1|0.87|0.82|17|419|403 |
| chr7_3 | exon | 52321904 | 52322091 | 52321904 | ID=Msa1109020-mRNA-1:exon:10985;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52322232 | 52322357 | 52322232 | ID=Msa1109020-mRNA-1:exon:10986;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52322466 | 52322554 | 52322466 | ID=Msa1109020-mRNA-1:exon:10987;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52325356 | 52325443 | 52325356 | ID=Msa1109020-mRNA-1:exon:10988;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52325647 | 52325732 | 52325647 | ID=Msa1109020-mRNA-1:exon:10989;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52325835 | 52325921 | 52325835 | ID=Msa1109020-mRNA-1:exon:10990;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52326004 | 52326073 | 52326004 | ID=Msa1109020-mRNA-1:exon:10991;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52326161 | 52326240 | 52326161 | ID=Msa1109020-mRNA-1:exon:10992;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52326326 | 52326387 | 52326326 | ID=Msa1109020-mRNA-1:exon:10993;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52326495 | 52326570 | 52326495 | ID=Msa1109020-mRNA-1:exon:10994;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52326970 | 52327032 | 52326970 | ID=Msa1109020-mRNA-1:exon:10995;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52327137 | 52327218 | 52327137 | ID=Msa1109020-mRNA-1:exon:10996;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52327693 | 52327769 | 52327693 | ID=Msa1109020-mRNA-1:exon:10997;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52327899 | 52327946 | 52327899 | ID=Msa1109020-mRNA-1:exon:10998;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52328064 | 52328193 | 52328064 | ID=Msa1109020-mRNA-1:exon:10999;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52328216 | 52328543 | 52328216 | ID=Msa1109020-mRNA-1:exon:11000;Parent=Msa1109020-mRNA-1 |
| chr7_3 | exon | 52328568 | 52328591 | 52328568 | ID=Msa1109020-mRNA-1:exon:11001;Parent=Msa1109020-mRNA-1 |
| chr7_3 | five_prime_UTR | 52321904 | 52321976 | 52321904 | ID=Msa1109020-mRNA-1:five_prime_utr;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52321977 | 52322091 | 52321977 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52322232 | 52322357 | 52322232 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52322466 | 52322554 | 52322466 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52325356 | 52325443 | 52325356 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52325647 | 52325732 | 52325647 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52325835 | 52325921 | 52325835 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52326004 | 52326073 | 52326004 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52326161 | 52326240 | 52326161 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52326326 | 52326387 | 52326326 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52326495 | 52326570 | 52326495 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52326970 | 52327032 | 52326970 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52327137 | 52327218 | 52327137 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52327693 | 52327769 | 52327693 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52327899 | 52327946 | 52327899 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | CDS | 52328064 | 52328126 | 52328064 | ID=Msa1109020-mRNA-1:cds;Parent=Msa1109020-mRNA-1 |
| chr7_3 | three_prime_UTR | 52328127 | 52328193 | 52328127 | ID=Msa1109020-mRNA-1:three_prime_utr;Parent=Msa1109020-mRNA-1 |
| chr7_3 | three_prime_UTR | 52328216 | 52328543 | 52328216 | ID=Msa1109020-mRNA-1:three_prime_utr;Parent=Msa1109020-mRNA-1 |
| chr7_3 | three_prime_UTR | 52328568 | 52328591 | 52328568 | ID=Msa1109020-mRNA-1:three_prime_utr;Parent=Msa1109020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
